CmaCh16G001710 (gene) Cucurbita maxima (Rimu)

NameCmaCh16G001710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEmbryo-specific family protein
LocationCma_Chr16 : 747568 .. 751818 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATGACCTTTATAAAGACCGACACATCATCAATTTCCCATCTTCTGTTTTCGTGTGCGACGTTTTAGAGAAAAATGGAGAGGTCCTCGTCGCCTCCTCTGTTGTTGCTACTGCTGCTCTCTTCCCTCGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACATTGCTCCCCAGTCCCTCCCGATCAACTACATCCAGGTCCGTGTTTCAACCCTCTTTACTCTCAACCGTCGCTTTTGTATTTTTCCTTTAACTTTTGCGTAATATACTTCTCTTTTTCTTTCGTGTTGCGAAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGGTGTTCTTTCTTTTCTGTCATTTTCCTTTTTAAAATTATTAACTCTAGGGTTTTTACTTTTATTTACCTATTTCTGAAATTAATTTCCCTGATTCCGAACAGGAGTATGGATTTTGTTTCTAATCTTACGCCAGGATGATTCTGGCCTGAATAATAGACTTTATTATTATTATGTTTTTGTTAATCAAGCACTTAATATATGATCTGATCCACGGATTTCTGTTTTGTTTTGATTGAATGTTTCACATGTGTAACAAATAGATTGTGGAGAAGAAGTTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAATGATCGACCCTGCAGTGTCCAAATTAGTTACATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCCTTCTGTTCATCTTAAAATCCTCCATCCCAAGAAACAATTGGTTTGGCTTTGATTTACGACAATATCCTTTTCCATCGCCACCGTCCTACAACCCGTCCCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACCATCCTCTGCCACCGCCGCCGGAGCCAATTCTTCCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCCCTTCTGTGATTCTGCAGTAGCTGCTTGCTTTATGTAGTAGTTTAGTAGGTAAATTTTGTAGTGGTGGGTGGGTGATGTTAATGTTCAAGTTTCATCCCCCATTCCACCATCTTGTCGTACCGTAAGCTTTCAAAGCTTTAGTTAAACTTTATCTTTTCAGCTGTATGGCTATAAGCCTGGTGCAATTCTACAGCCACTGCTTGTTCTAAGTGGGTGGTGGGCGATACTATACTTACGTTTCATCCCCTTTTCCACCCATGTTTTAAGGTCTAGACAAGCAAGCTTTACTGAACCTCTTTATGTTATCGTCTTTTCAGTTGTATGAGATATATGCCTTCTCTATGAAAGTCGGCCCAGCCTTCTATGTCGAAGGTTGTATGGTGTTTTATTTTTCAACAATGTGGGATGGAGTGGATGTGTTGAATTTTGATTTTGAGTATTTTTTGTATTTATTTCAACCATAATTATTATAAATAAAATAACATTAGTTAAAACCTTATTAATTTTGAGAATTATACCAAAAGTACTTAATAATCTGACATTTGAACTTTGTATTTAATATCAAAATGGCTATTATACCATCTTAATTCGATTATTTGTCCAGATATTTCTAAAATTACACAAAGGTTTTTCCCTCTGAAATTAATAAATTGATTCATTTTTAAAAAATCACATGAAAATTTTATTTACATTTTAATTTCTTTTTTTATTTTCTCAAAGCCAACATGAATAAAAGCACCCTCTAGAGGAGGAGGATAGAAATATCTAGTGATAGTTTCGTATTTTTTCAATAGGTCACTTTCGGAGTTACAATCAAACACATGAAGTCTAACAAGTAAATCAATCCGGTCTCCATTAATATATCTCATCTCAAGTTCATTTCATTTCTGTTAATAAAAAATATAAAAAATAATATTGAAACTAAATATTCTTTAAAATTTTAGTTTTAAAATAGATTGATGTTAATTTAAAAAGGTGTAATTTTTGTTGGCATTAGTAAGAAAAGGAAAATAGTTTGTTGGTTACAAAAGATTGAGGATTACTTGCATTTTGAGTTTGGTATAAATATTTTATTTATTTATTTGCTTTTTTTTTTTTTCCCGACTTCCCGGCAGTGAAAACCTACTACTCCATCACCGATTGACGACCATATATTTGATTGGAGCCAAGACTCTGGTTCTGCACCTCTTCAACCAAGCTTCTTGTACTCTCGTTTCAGTGGAGCAAAACGAAGGTCTGTAAAAATGGTGATGCCTCCTCTTTCTTTCTTCATCTTTTTCTTCTTCTCCATTTCTGCCGCCGTATCATCCGGTTCTCTGCCTCAACCTGCTCCAAAATCCTTAACCATCGGCTATATTCAGGTTCCGTCTATCATTTTACCTGTACTTTCGTTACTCAATCGATGTGCTTATCTGAGGTTCTCTGTGAATCAAACTGACTCTGTTATCTTCTTCTTTGGTACTTTCGGCTGAAGAAAGCGGGAGATTGCAACTACAGGGTCAATATAACAACAAGCTGCTCATCCCCTTTCCATATTACTGCTGAAATCGGTGTTCTGTTTGGGGATGCGCATGGAAATCAGGTTCGTTCTTCGGGCATTTTAATTTAAATTATTTTGCAATTAGTTCATCTGCTGAATATTGTTAGACTCAGAGAAGAAAATTGAAAGCATATTGGTTAACATTTAAGCATCCAAGGCCAAACAGAAGTCTATTCCTGATTTTTCATTGAATATGGCTGTTTTCCTGCTGTGCTCTATATTATAGTCAAATTTTTTATATTGGAGTTTTGAATTGCAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAACAAATAAACTAGAATTAGAAGCTTACAATCTGTGATTCTATTGAAAGGATACATAGTTGGTTCACTTAAACTGGAATTAGAAGCTTATAATCAGTTTTCAAATATGTTTATCATTACAGATTTGAAACCAAAAACAAGAAATTGTTGGTAGAATAACAGGTAGTAGCACTGTTAGTTTCTTAACTTTCAAATGCTTTATTAGTTCCTCATCTTTAAAAGTTTGTGTTAGTCTCTACAGTTTACATACATTCATAAGCTTGATATATAATCAGTTACACAGTGACTTTAAACACTTGGAAATGTGATATTCAATTGAGAGATGAACAAAGCATGTGGGTATGGTAAGACTTCATTAAATAATGTTTAAAAGGATGAGGATGGCTGATTTAGAAGTTGGAAAGCAGATATATGAGCCAAAGCTGGAAGTTGAAAGCAGCAAAGCACTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGGCCATGCACAGACCAGATATGTTTCTTTTACCTTTACAAGAAGGGGTCCGACGATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGATATTGACACTGTTAAATACAAATACAACTCCTCAATCCCAGAGGACACATGGTATGGCTTTGACGACTGCCAATACTTCACATCGCCACCGCCACCGCCACCATCTCCGCCAGCCCCCTCCACAGCCGGCCATCAGCGGAGGTTGAAGTGGCTTGCTTATGTGATCCCTGTGCTTCTTAGCAGCGCTGTGCTATGAGTGTGATTCTGCATCTTGGCCATGGGCGTGGTTGTATTTTTGATCCACCGCTGTGCCTGTATTTGCTTTGTGTTTTTTGAATCTCTTGATGATCACATCAAGGTCAAAGGAATGTAGTTCATCTTTGATATGCAGAATGGGATTTGATGGAGGAATATCTGTTATGATTGATACCTTTTTCTTTCTCGGCTTTGAGAGTAGAATATTAATTTTTGTTTAAATA

mRNA sequence

CCATGACCTTTATAAAGACCGACACATCATCAATTTCCCATCTTCTGTTTTCGTGTGCGACGTTTTAGAGAAAAATGGAGAGGTCCTCGTCGCCTCCTCTGTTGTTGCTACTGCTGCTCTCTTCCCTCGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACATTGCTCCCCAGTCCCTCCCGATCAACTACATCCAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGATTGTGGAGAAGAAGTTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAATGATCGACCCTGCAGTGTCCAAATTAGTTACATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCCTTCTGTTCATCTTAAAATCCTCCATCCCAAGAAACAATTGGTTTGGCTTTGATTTACGACAATATCCTTTTCCATCGCCACCGTCCTACAACCCGTCCCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACCATCCTCTGCCACCGCCGCCGGAGCCAATTCTTCCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCCCTTCTTGGAGCAAAACGAAGGTCTGTAAAAATGGTGATGCCTCCTCTTTCTTTCTTCATCTTTTTCTTCTTCTCCATTTCTGCCGCCGTATCATCCGGTTCTCTGCCTCAACCTGCTCCAAAATCCTTAACCATCGGCTATATTCAGAAAGCGGGAGATTGCAACTACAGGGTCAATATAACAACAAGCTGCTCATCCCCTTTCCATATTACTGCTGAAATCGGTGTTCTGTTTGGGGATGCGCATGGAAATCAGATATATGAGCCAAAGCTGGAAGTTGAAAGCAGCAAAGCACTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGGCCATGCACAGACCAGATATGTTTCTTTTACCTTTACAAGAAGGGGTCCGACGATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGATATTGACACTGTTAAATACAAATACAACTCCTCAATCCCAGAGGACACATGGTATGGCTTTGACGACTGCCAATACTTCACATCGCCACCGCCACCGCCACCATCTCCGCCAGCCCCCTCCACAGCCGGCCATCAGCGGAGGTTGAAGTGGCTTGCTTATGTGATCCCTGTGCTTCTTAGCAGCGCTGTGCTATGAGTGTGATTCTGCATCTTGGCCATGGGCGTGGTTGTATTTTTGATCCACCGCTGTGCCTGTATTTGCTTTGTGTTTTTTGAATCTCTTGATGATCACATCAAGGTCAAAGGAATGTAGTTCATCTTTGATATGCAGAATGGGATTTGATGGAGGAATATCTGTTATGATTGATACCTTTTTCTTTCTCGGCTTTGAGAGTAGAATATTAATTTTTGTTTAAATA

Coding sequence (CDS)

ATGGAGAGGTCCTCGTCGCCTCCTCTGTTGTTGCTACTGCTGCTCTCTTCCCTCGCCGTCGTCTGCTCCGCTGTCGAGCCGCCTCAGATCACCGTGAAGCCCGACATTGCTCCCCAGTCCCTCCCGATCAACTACATCCAGGAAGTTGGAAGCTGTTCTTACGAGGTTACAGTAGCAACAAGCTGTTCATCTCCTTCATTTATCACTGACGAAATCGGTGTGTTGTTTGGAGATTCTCATGGAAATCAGATTGTGGAGAAGAAGTTGAGCAATGGAGACAAGGTGTTTGATAGTTGTAATACAGATAGGTTTGTTCTAAATGATCGACCCTGCAGTGTCCAAATTAGTTACATGTATATCTATAAAGACGGAGCTGACGATTGGCTTCCGAACTCTGTTGAAATCTCTGGCTCTGGAATCAAACCCCTTCTGTTCATCTTAAAATCCTCCATCCCAAGAAACAATTGGTTTGGCTTTGATTTACGACAATATCCTTTTCCATCGCCACCGTCCTACAACCCGTCCCCTCCTTTTCCATCGTTGTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCACCATCCTCTGCCACCGCCGCCGGAGCCAATTCTTCCTCCTCCGCCTCCACCTAAGCCTGTTCTTCCCCCACCGCCTCCTCCACCATCATCCTCCAGCAAAATCTCTGGTCTGAAATTGGCTAAGGTATCTGTGGTTTTGGGATTGCTGTTTGCCCTTCTTGGAGCAAAACGAAGGTCTGTAAAAATGGTGATGCCTCCTCTTTCTTTCTTCATCTTTTTCTTCTTCTCCATTTCTGCCGCCGTATCATCCGGTTCTCTGCCTCAACCTGCTCCAAAATCCTTAACCATCGGCTATATTCAGAAAGCGGGAGATTGCAACTACAGGGTCAATATAACAACAAGCTGCTCATCCCCTTTCCATATTACTGCTGAAATCGGTGTTCTGTTTGGGGATGCGCATGGAAATCAGATATATGAGCCAAAGCTGGAAGTTGAAAGCAGCAAAGCACTTGCAAAATGCAGCAAAGACATTTTTGAACTGACAGGGCCATGCACAGACCAGATATGTTTCTTTTACCTTTACAAGAAGGGGTCCGACGATTGGATTCCAGAGACTGTAGAAATCTCCAGCCCTGATATTGACACTGTTAAATACAAATACAACTCCTCAATCCCAGAGGACACATGGTATGGCTTTGACGACTGCCAATACTTCACATCGCCACCGCCACCGCCACCATCTCCGCCAGCCCCCTCCACAGCCGGCCATCAGCGGAGGTTGAAGTGGCTTGCTTATGTGATCCCTGTGCTTCTTAGCAGCGCTGTGCTATGA

Protein sequence

MERSSSPPLLLLLLLSSLAVVCSAVEPPQITVKPDIAPQSLPINYIQEVGSCSYEVTVATSCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYKDGADDWLPNSVEISGSGIKPLLFILKSSIPRNNWFGFDLRQYPFPSPPSYNPSPPFPSLSPPPPPPPPPPPHHPLPPPPEPILPPPPPPKPVLPPPPPPPSSSSKISGLKLAKVSVVLGLLFALLGAKRRSVKMVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHITAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPAPSTAGHQRRLKWLAYVIPVLLSSAVL
BLAST of CmaCh16G001710 vs. TrEMBL
Match: A0A0A0L699_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177960 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.2e-80
Identity = 181/250 (72.40%), Postives = 194/250 (77.60%), Query Frame = 1

Query: 6   SPP--LLLLLLLSSLAVVCSAVEPPQITVKPDIAPQSLPINYIQEVGSCSYEVTVATSCS 65
           +PP  L+LLLLLS LAVVCSAV P  IT+ PD+ P SLPI+YIQEVGSCSYEVTV TSC+
Sbjct: 3   TPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCA 62

Query: 66  SPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYKD 125
           SPS IT EIGVLFGD++GNQI+EKKL  GDKVF SC TD FVL DRPC +QISYMYIYKD
Sbjct: 63  SPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKD 122

Query: 126 GADDWLPNSVEISGSGIKPLLFILKSSIPRNNWFGFDLRQYPFPSPPSYNPSPPFPSLSP 185
           GADDWLPNSVEISGSGI PLLFI KSSIP N WFGFDLRQY FP PPS  P+PP      
Sbjct: 123 GADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPP------ 182

Query: 186 PPPPPPPPPPHHPLPPPPEPILP-PPPPPKPVLPPPPP-----PPSSSSKISGLKLAKVS 245
                   PP HPL PPPEPI   PPPPPKP+LPPPPP     PPSSSSKISG K   VS
Sbjct: 183 --------PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVS 238

Query: 246 VVLGLLFALL 248
           V+LGLL ALL
Sbjct: 243 VILGLLTALL 238

BLAST of CmaCh16G001710 vs. TrEMBL
Match: A0A0A0L8G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.5e-76
Identity = 146/199 (73.37%), Postives = 160/199 (80.40%), Query Frame = 1

Query: 253 SVKMVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSP 312
           S+ M  P L FF F FFSISAA S+ S      KSL+I YI++AGDCNYRVNITTSCSSP
Sbjct: 7   SLHMATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSP 66

Query: 313 FHITAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGS 372
           F+I++EIGVLFGDA GNQIYEPKLEVES  A  KC KDIFEL GPC DQICFFYLYK GS
Sbjct: 67  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 126

Query: 373 DDWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPA-PSTAGHQ 432
           D+WIPETVEISSPDIDTVKY YNSSIP DTWYGF+DCQYF SP PPPP PP+ PSTAG  
Sbjct: 127 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 186

Query: 433 RRLKWLAYVIPVLLSSAVL 451
            R KW+A +IPVL S  +L
Sbjct: 187 PRWKWIASLIPVLFSCFLL 199

BLAST of CmaCh16G001710 vs. TrEMBL
Match: B9ICY2_POPTR (Embryo-specific family protein OS=Populus trichocarpa GN=POPTR_0015s14220g PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35
Identity = 82/193 (42.49%), Postives = 112/193 (58.03%), Query Frame = 1

Query: 261 LSFFIFFFF----SISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHIT 320
           LS+F FFF         ++ S   PQP  +S  +  +Q AG C Y V I+TSCSSP +  
Sbjct: 9   LSYFAFFFVLGLSQADQSIISHLQPQPL-ESFNLSLVQNAGSCYYTVLISTSCSSPRYTR 68

Query: 321 AEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDWI 380
            +IG+ FGDA+GNQIY P+L+  S+    +CS D F+++GPC  QIC+ YLY+ G D W 
Sbjct: 69  DQIGISFGDAYGNQIYTPRLDDPSTGTFERCSSDTFQISGPCAYQICYVYLYRSGRDGWK 128

Query: 381 PETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPAPSTAGHQRRLKW 440
           P+TV+IS     TV + YN+ IP D WYGF+ CQ               S+A  QR  KW
Sbjct: 129 PDTVQISGYYSRTVTFTYNTFIPRDVWYGFNLCQ-------------NASSALQQRIPKW 187

Query: 441 LAYVIPVLLSSAV 450
             +VI  +L+S +
Sbjct: 189 FMFVILAVLASFI 187

BLAST of CmaCh16G001710 vs. TrEMBL
Match: V4S840_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006003mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 81/197 (41.12%), Postives = 108/197 (54.82%), Query Frame = 1

Query: 254 VKMVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPF 313
           +K+  P L    F F    A  +S  L   A +S  + YIQ  G C+Y V ITTSCSS  
Sbjct: 1   MKIAAPILLLLAFAFTLSEAETTSLQLKPRAFESFNVSYIQNLGSCSYTVVITTSCSSSK 60

Query: 314 HITAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSD 373
           +   +I + FGDA+GNQIY P+L+  S+ A   CS D FE+ GPC  QIC+ YLY+ G D
Sbjct: 61  YTRDQISIAFGDAYGNQIYAPRLDDPSTDAFESCSSDTFEIRGPCAYQICYVYLYRTGPD 120

Query: 374 DWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPAPSTAGHQRR 433
            W PE+V+I   +   V + YN+ IP D WYGF+ C+             + S+A  Q  
Sbjct: 121 GWKPESVKIYGANSRAVSFYYNTFIPSDIWYGFNLCR-------------SASSAHQQHV 180

Query: 434 LKWLAYVIPVLLSSAVL 451
            +W  YVI  LL  A+L
Sbjct: 181 PRWSVYVILGLLLCALL 184

BLAST of CmaCh16G001710 vs. TrEMBL
Match: A0A087G5G2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G067600 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32
Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 1

Query: 267 FFFSISAAVSSG---SLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFHITAEIGVLF 326
           FFF+I ++VS     S P  AP+S  +  IQ  G C Y V I+TSCSSP +   +I + F
Sbjct: 14  FFFTILSSVSGSIVVSKPHAAPESFNLSLIQNFGTCRYTVIISTSCSSPRYTRDQISLSF 73

Query: 327 GDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDWIPETVEIS 386
           GD +GNQ+Y P+L+   S+A  +CS D +E+ GPC  QIC+ YLY+ G D W+P +V+I 
Sbjct: 74  GDGYGNQVYAPRLDDPGSRAFEQCSSDTYEINGPCAYQICYVYLYRSGPDGWVPASVKIF 133

Query: 387 SPDIDTVKYKYNSSIPEDTWYGFDDC 410
           S     V + YN+ +PE  WYGF+ C
Sbjct: 134 SHGSKAVTFTYNTYVPESIWYGFNYC 159

BLAST of CmaCh16G001710 vs. TAIR10
Match: AT5G62200.1 (AT5G62200.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-33
Identity = 68/148 (45.95%), Postives = 90/148 (60.81%), Query Frame = 1

Query: 265 IFFFFSISAAVSSGSLPQP--APKSLTIGYIQKAGD-CNYRVNITTSCSSPFHITAEIGV 324
           I F F IS +V    +  P    +S  +  IQK G+ C Y V I+TSCSS  +   +I V
Sbjct: 11  ISFVFIISTSVYESKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISV 70

Query: 325 LFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDWIPETVE 384
            FGD +GNQIY P+L+  S+K   +CS D F++ GPCT QIC+ YLY+ G D WIP TV+
Sbjct: 71  AFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVK 130

Query: 385 ISSPDIDTVKYKYNSSIPEDTWYGFDDC 410
           I S     V + YN+ +PE  WYGF+ C
Sbjct: 131 IYSHGSKAVTFPYNTYVPESVWYGFNYC 158

BLAST of CmaCh16G001710 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3)

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-26
Identity = 75/221 (33.94%), Postives = 110/221 (49.77%), Query Frame = 1

Query: 256 MVMPPLSF-FIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSPFH 315
           M  P LS  F+FF F         S+ Q            + G C Y V + TSC SP  
Sbjct: 1   MTFPSLSVSFLFFAFIFVTHAFDLSIIQ-----------MQQGTCPYTVVVMTSCLSPES 60

Query: 316 ITAEIGVLFGDAHGNQIYEPKLE--VESSKALAKCSKDIFELTGPC-TDQICFFYLYKKG 375
              +I ++FGDA GN++Y PKL   V     L KCS + F++ G C  D IC  Y+ + G
Sbjct: 61  TRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNG 120

Query: 376 SDDWIPETVEISSPDIDTVKYKYNSSIPE-DTWYGFDDCQ-------------YF----- 435
            D W+PE++EI S    +VK+ ++ S+P+ +TWYG ++C              +F     
Sbjct: 121 PDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTTGRPSSPDLPPPHFPPEFP 180

Query: 436 ----TSPPPPPPSPPAPSTAGHQRRLKWLAYVIPVLLSSAV 450
               T+PPPPPP P A S  G+   + +LA+ I   +++ V
Sbjct: 181 PETPTTPPPPPPRPSAASRLGNGESV-FLAFAIATAIAAMV 209

BLAST of CmaCh16G001710 vs. TAIR10
Match: AT2G41475.1 (AT2G41475.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-26
Identity = 59/171 (34.50%), Postives = 90/171 (52.63%), Query Frame = 1

Query: 260 PLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGY--IQKAGDCNYRVNITTSCSSPFHITA 319
           PL  F    F++ ++  S    +P P    I    ++ A  C+Y V I TSCSS  +   
Sbjct: 7   PLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRD 66

Query: 320 EIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGSDDWIP 379
           +I + FGD +GN++Y  +L+  SS+   KCS D ++++GPC   +C+ YL ++GSD W P
Sbjct: 67  KISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKP 126

Query: 380 ETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPAPSTA 429
           E V+I    I +V + YN  +P   WYGF+ C    +     P     S A
Sbjct: 127 ENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCNGIGNTKSSQPISTTSSVA 177

BLAST of CmaCh16G001710 vs. TAIR10
Match: AT5G62210.1 (AT5G62210.1 Embryo-specific protein 3, (ATS3))

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-25
Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 1

Query: 299 CNYRVNITTSCSSPFHITAEIGVLFGDAHGNQIYEPKLE--VESSKALAKCSKDIFELTG 358
           C Y V +TTSC SP     ++ +  GDA  NQ+  P+L+  +       KCS D F++ G
Sbjct: 40  CPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKG 99

Query: 359 PCTDQICFFYLYKKGSDDWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPP 418
            C + IC  Y+Y+ G+D WIPETVEI      +VK+ +N ++PE+ WYG + C     PP
Sbjct: 100 KCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPP 159

Query: 419 PPPPSPP 424
           P P  PP
Sbjct: 160 PSPDFPP 166

BLAST of CmaCh16G001710 vs. NCBI nr
Match: gi|659077284|ref|XP_008439124.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo])

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 158/202 (78.22%), Postives = 170/202 (84.16%), Query Frame = 1

Query: 250 KRRSVKMVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSC 309
           K  S+ M  P L FFIF  FSISA+ S+GSLPQPA KSL+I YI++AGDCNYRVNITTSC
Sbjct: 4   KSSSLNMATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNITTSC 63

Query: 310 SSPFHITAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYK 369
           SSPF+I++EIGVLFGDAHGNQIYEPKLEVES  A  KC KDIFEL GPCTDQICFFYLYK
Sbjct: 64  SSPFYISSEIGVLFGDAHGNQIYEPKLEVESGNAFGKCRKDIFELIGPCTDQICFFYLYK 123

Query: 370 KGSDDWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPA-PSTA 429
            GSDDWIPETVEISSPDIDTVKY YNSSIP DTWYGFDDCQYF SP PPPP PP+ PSTA
Sbjct: 124 NGSDDWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVPSTA 183

Query: 430 GHQRRLKWLAYVIPVLLSSAVL 451
           G   R KWLA +IPVL SS +L
Sbjct: 184 GCLPRWKWLASLIPVLFSSFLL 205

BLAST of CmaCh16G001710 vs. NCBI nr
Match: gi|659077282|ref|XP_008439123.1| (PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo])

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 187/254 (73.62%), Postives = 200/254 (78.74%), Query Frame = 1

Query: 1   MERSSSPPLLLLLLLSSLAVVCSAVEPPQITVKPDIAPQSLPINYIQEVGSCSYEVTVAT 60
           M+   SP  LLLL LS LAVVCSAV P  IT+ P++AP SLPI+YIQEVGSCSY VTVAT
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCSSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYI 120
           SC+SPS I  EIGVLFGD++GNQI+EKKLSNGDKVF SC TD FVL DRPC VQISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGIKPLLFILKSSIPRNNWFGFDLRQYPF-PSPPSYNPSPPFP 180
           YKDG DDWLPNSVEISGSGI PLLFI KSSIP N WFGFDLRQY F P PPS  P+PP P
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 SLSPPPPPPPPPPPHHPLPPPPEPIL-PPPPPPKPVLPPPPP-----PPSSSSKISGLKL 240
            LSPPPPP       +P  PPPEP+  PPPPPPKPVLPPPPP     PPSSSSKISG K 
Sbjct: 181 WLSPPPPP-------YPTVPPPEPVFPPPPPPPKPVLPPPPPPAHPTPPSSSSKISGQKS 240

Query: 241 AKVSVVLGLLFALL 248
             VSV+LGLL ALL
Sbjct: 241 GMVSVILGLLTALL 247

BLAST of CmaCh16G001710 vs. NCBI nr
Match: gi|449460780|ref|XP_004148123.1| (PREDICTED: WAS protein family homolog 1-like [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 3.2e-80
Identity = 181/250 (72.40%), Postives = 194/250 (77.60%), Query Frame = 1

Query: 6   SPP--LLLLLLLSSLAVVCSAVEPPQITVKPDIAPQSLPINYIQEVGSCSYEVTVATSCS 65
           +PP  L+LLLLLS LAVVCSAV P  IT+ PD+ P SLPI+YIQEVGSCSYEVTV TSC+
Sbjct: 3   TPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCA 62

Query: 66  SPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYKD 125
           SPS IT EIGVLFGD++GNQI+EKKL  GDKVF SC TD FVL DRPC +QISYMYIYKD
Sbjct: 63  SPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKD 122

Query: 126 GADDWLPNSVEISGSGIKPLLFILKSSIPRNNWFGFDLRQYPFPSPPSYNPSPPFPSLSP 185
           GADDWLPNSVEISGSGI PLLFI KSSIP N WFGFDLRQY FP PPS  P+PP      
Sbjct: 123 GADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPP------ 182

Query: 186 PPPPPPPPPPHHPLPPPPEPILP-PPPPPKPVLPPPPP-----PPSSSSKISGLKLAKVS 245
                   PP HPL PPPEPI   PPPPPKP+LPPPPP     PPSSSSKISG K   VS
Sbjct: 183 --------PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVS 238

Query: 246 VVLGLLFALL 248
           V+LGLL ALL
Sbjct: 243 VILGLLTALL 238

BLAST of CmaCh16G001710 vs. NCBI nr
Match: gi|449460842|ref|XP_004148153.1| (PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 2.2e-76
Identity = 146/199 (73.37%), Postives = 160/199 (80.40%), Query Frame = 1

Query: 253 SVKMVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSCSSP 312
           S+ M  P L FF F FFSISAA S+ S      KSL+I YI++AGDCNYRVNITTSCSSP
Sbjct: 7   SLHMATPLLPFFFFSFFSISAAQSTAS------KSLSIAYIREAGDCNYRVNITTSCSSP 66

Query: 313 FHITAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYKKGS 372
           F+I++EIGVLFGDA GNQIYEPKLEVES  A  KC KDIFEL GPC DQICFFYLYK GS
Sbjct: 67  FYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGS 126

Query: 373 DDWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPA-PSTAGHQ 432
           D+WIPETVEISSPDIDTVKY YNSSIP DTWYGF+DCQYF SP PPPP PP+ PSTAG  
Sbjct: 127 DNWIPETVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGSL 186

Query: 433 RRLKWLAYVIPVLLSSAVL 451
            R KW+A +IPVL S  +L
Sbjct: 187 PRWKWIASLIPVLFSCFLL 199

BLAST of CmaCh16G001710 vs. NCBI nr
Match: gi|659077286|ref|XP_008439125.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X2 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 3.7e-44
Identity = 106/202 (52.48%), Postives = 123/202 (60.89%), Query Frame = 1

Query: 250 KRRSVKMVMPPLSFFIFFFFSISAAVSSGSLPQPAPKSLTIGYIQKAGDCNYRVNITTSC 309
           K  S+ M  P L FFIF  FSISA+ S+GSLPQPA KSL+I YI++AGDCNYRVNITTSC
Sbjct: 4   KSSSLNMATPLLPFFIFSLFSISASQSTGSLPQPASKSLSIAYIREAGDCNYRVNITTSC 63

Query: 310 SSPFHITAEIGVLFGDAHGNQIYEPKLEVESSKALAKCSKDIFELTGPCTDQICFFYLYK 369
           SSPF+I++EIGVLFGDAHGNQ                   +  E++ P  D + +     
Sbjct: 64  SSPFYISSEIGVLFGDAHGNQ-----------NGSDDWIPETVEISSPDIDTVKYT---- 123

Query: 370 KGSDDWIPETVEISSPDIDTVKYKYNSSIPEDTWYGFDDCQYFTSPPPPPPSPPA-PSTA 429
                                   YNSSIP DTWYGFDDCQYF SP PPPP PP+ PSTA
Sbjct: 124 ------------------------YNSSIPNDTWYGFDDCQYFPSPSPPPPPPPSVPSTA 166

Query: 430 GHQRRLKWLAYVIPVLLSSAVL 451
           G   R KWLA +IPVL SS +L
Sbjct: 184 GCLPRWKWLASLIPVLFSSFLL 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L699_CUCSA2.2e-8072.40Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177960 PE=4 SV=1[more]
A0A0A0L8G7_CUCSA1.5e-7673.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1[more]
B9ICY2_POPTR2.2e-3542.49Embryo-specific family protein OS=Populus trichocarpa GN=POPTR_0015s14220g PE=4 ... [more]
V4S840_9ROSI1.2e-3341.12Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006003mg PE=4 SV=1[more]
A0A087G5G2_ARAAL1.3e-3245.21Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G067600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G62200.11.4e-3345.95 Embryo-specific protein 3, (ATS3)[more]
AT5G07190.12.8e-2633.94 seed gene 3[more]
AT2G41475.12.8e-2634.50 Embryo-specific protein 3, (ATS3)[more]
AT5G62210.11.1e-2540.94 Embryo-specific protein 3, (ATS3)[more]
Match NameE-valueIdentityDescription
gi|659077284|ref|XP_008439124.1|1.1e-8578.22PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo][more]
gi|659077282|ref|XP_008439123.1|2.9e-8173.62PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo][more]
gi|449460780|ref|XP_004148123.1|3.2e-8072.40PREDICTED: WAS protein family homolog 1-like [Cucumis sativus][more]
gi|449460842|ref|XP_004148153.1|2.2e-7673.37PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus][more]
gi|659077286|ref|XP_008439125.1|3.7e-4452.48PREDICTED: uncharacterized protein LOC103484014 isoform X2 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001024PLAT/LH2_dom
IPR010417Embryo-specific_ATS3
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G001710.1CmaCh16G001710.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001024PLAT/LH2 domainunknownSSF49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 49..158
score: 6.83E-11coord: 298..406
score: 8.99
IPR010417Embryo-specific 3PFAMPF06232ATS3coord: 48..160
score: 6.7E-30coord: 294..409
score: 1.8
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 163..179
score: 7.5E-12coord: 183..200
score: 7.5E-12coord: 201..226
score: 7.5E-12coord: 26..38
score: 7.5
NoneNo IPR availablePANTHERPTHR31718FAMILY NOT NAMEDcoord: 247..423
score: 1.5
NoneNo IPR availablePANTHERPTHR31718:SF8EMBRYO-SPECIFIC PROTEIN 3coord: 247..423
score: 1.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G001710CmoCh16G001750Cucurbita moschata (Rifu)cmacmoB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G001710Cucumber (Gy14) v2cgybcmaB342
CmaCh16G001710Cucumber (Gy14) v2cgybcmaB749
CmaCh16G001710Melon (DHL92) v3.6.1cmamedB329
CmaCh16G001710Melon (DHL92) v3.6.1cmamedB344
CmaCh16G001710Silver-seed gourdcarcmaB0130
CmaCh16G001710Silver-seed gourdcarcmaB0994
CmaCh16G001710Silver-seed gourdcarcmaB1206
CmaCh16G001710Silver-seed gourdcarcmaB1264
CmaCh16G001710Cucumber (Chinese Long) v3cmacucB0383
CmaCh16G001710Cucumber (Chinese Long) v3cmacucB0411
CmaCh16G001710Watermelon (97103) v2cmawmbB346
CmaCh16G001710Watermelon (97103) v2cmawmbB349
CmaCh16G001710Cucurbita maxima (Rimu)cmacmaB338
CmaCh16G001710Cucurbita maxima (Rimu)cmacmaB345
CmaCh16G001710Cucurbita maxima (Rimu)cmacmaB346
CmaCh16G001710Cucurbita maxima (Rimu)cmacmaB359
CmaCh16G001710Cucumber (Gy14) v1cgycmaB0711
CmaCh16G001710Cucumber (Gy14) v1cgycmaB0996
CmaCh16G001710Cucurbita moschata (Rifu)cmacmoB327
CmaCh16G001710Wild cucumber (PI 183967)cmacpiB335
CmaCh16G001710Wild cucumber (PI 183967)cmacpiB350
CmaCh16G001710Cucumber (Chinese Long) v2cmacuB329
CmaCh16G001710Cucumber (Chinese Long) v2cmacuB346
CmaCh16G001710Melon (DHL92) v3.5.1cmameB286
CmaCh16G001710Melon (DHL92) v3.5.1cmameB296
CmaCh16G001710Watermelon (Charleston Gray)cmawcgB296
CmaCh16G001710Watermelon (Charleston Gray)cmawcgB299
CmaCh16G001710Watermelon (97103) v1cmawmB316
CmaCh16G001710Watermelon (97103) v1cmawmB322
CmaCh16G001710Watermelon (97103) v1cmawmB326
CmaCh16G001710Cucurbita pepo (Zucchini)cmacpeB339
CmaCh16G001710Cucurbita pepo (Zucchini)cmacpeB342
CmaCh16G001710Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G001710Cucurbita pepo (Zucchini)cmacpeB358
CmaCh16G001710Bottle gourd (USVL1VR-Ls)cmalsiB303
CmaCh16G001710Bottle gourd (USVL1VR-Ls)cmalsiB312