CmaCh16G001280 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh16G001280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Arabidopsis thaliana protein of unknown function (DUF821)
Location	Cma_Chr16 : 579549 .. 579896 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATGTCCATGTTGGAGGAGGCCCAAAATAAGGCCCATTTCAGGCTTGTAGTCGTGGAGGGAAAGGCCTACGTGGAGACGTACGAAAAGGCATATCAAAGCAGAGGCAATGTTACGCTGTGGGGAATTGTACCGTTGTTACCGAATTACCCAGGAAAATTGCCCGATCTTGATCTCATGTTTAGCTGTAATGACCGGCTAGAGATCTATCAAAAGGATTACAGTGGGCCCGACAAGCCACCCCCTCCTCCGTTGTTTCGCTACAGCGGAGATGATGCCACGTGGGACATTGTGTTTCCTGATTGGTCCTTCTGGGGGTTAAAAGAGGACATTTTCAATAAATAA

mRNA sequence

ATGACAATGTCCATGTTGGAGGAGGCCCAAAATAAGGCCCATTTCAGGCTTGTAGTCGTGGAGGGAAAGGCCTACGTGGAGACGTACGAAAAGGCATATCAAAGCAGAGGCAATGTTACGCTGTGGGGAATTGTACCGTTGTTACCGAATTACCCAGGAAAATTGCCCGATCTTGATCTCATGTTTAGCTGTAATGACCGGCTAGAGATCTATCAAAAGGATTACAGTGGGCCCGACAAGCCACCCCCTCCTCCGTTGTTTCGCTACAGCGGAGATGATGCCACGTGGGACATTGTGTTTCCTGATTGGTCCTTCTGGGGGTTAAAAGAGGACATTTTCAATAAATAA

Coding sequence (CDS)

ATGACAATGTCCATGTTGGAGGAGGCCCAAAATAAGGCCCATTTCAGGCTTGTAGTCGTGGAGGGAAAGGCCTACGTGGAGACGTACGAAAAGGCATATCAAAGCAGAGGCAATGTTACGCTGTGGGGAATTGTACCGTTGTTACCGAATTACCCAGGAAAATTGCCCGATCTTGATCTCATGTTTAGCTGTAATGACCGGCTAGAGATCTATCAAAAGGATTACAGTGGGCCCGACAAGCCACCCCCTCCTCCGTTGTTTCGCTACAGCGGAGATGATGCCACGTGGGACATTGTGTTTCCTGATTGGTCCTTCTGGGGGTTAAAAGAGGACATTTTCAATAAATAA

Protein sequence

MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDLMFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKEDIFNK

Homology

[Close]

BLAST of CmaCh16G001280 vs. TrEMBL
Match: A0A0A0L5W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182060 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 8.3e-48
Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T SMLEEAQ KAHFR+VVVEGKAYVE Y KAYQSR N+T+WG+V LL  YPGKLPDLDL
Sbjct: 137 ITKSMLEEAQKKAHFRVVVVEGKAYVEAYGKAYQSRDNLTVWGVVQLLRRYPGKLPDLDL 196

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MFSC+DR EIYQKDYSG +KP PPPLFRYSGDDATWDIVFPDWSFWG  E
Sbjct: 197 MFSCDDRPEIYQKDYSGAEKPSPPPLFRYSGDDATWDIVFPDWSFWGWPE 246

[Close]

BLAST of CmaCh16G001280 vs. TrEMBL
Match: A0A0A0L5W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182110 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-33
Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T + LE  Q  A+FRL+++ GKAYVETY+K++Q+R   T+WGI+ LL  YPGK+PDLDL
Sbjct: 155 ITRATLEAGQRTANFRLLILNGKAYVETYKKSFQTRDTFTVWGILQLLRRYPGKVPDLDL 214

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   I    +SGP+ P PPPLFRY GDDAT+DIVFPDWSFWG  E
Sbjct: 215 MFDCVDWPVILTSHFSGPNGPTPPPLFRYCGDDATFDIVFPDWSFWGWPE 264

[Close]

BLAST of CmaCh16G001280 vs. TrEMBL
Match: A0A067JHM5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26109 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-33
Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T  MLE A+  A+FRLV+++GK Y+E Y+KA+Q+R   TLWGI+ LL  YPGK+PDL+L
Sbjct: 113 ITRDMLERARRTANFRLVILKGKVYIERYQKAFQTRDVFTLWGIIQLLRRYPGKVPDLEL 172

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   I   DYSGP+   PPPLFRY GDD T+DIVFPDWSFWG  E
Sbjct: 173 MFDCVDWPVIKSSDYSGPNATAPPPLFRYCGDDDTFDIVFPDWSFWGWPE 222

[Close]

BLAST of CmaCh16G001280 vs. TrEMBL
Match: V4SDX7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004696mg PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-33
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T  M+E A+  A+FRLV+V+GKAYVETY KA+QSR   TLWGI+ LL  YPG++PDLDL
Sbjct: 153 ITREMVERARKTANFRLVIVKGKAYVETYTKAFQSRDTFTLWGILQLLRRYPGRIPDLDL 212

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   + +  Y  PD P PPPLFRY  +D T+DIVFPDWSFWG  E
Sbjct: 213 MFDCVDWPVVLRNAYCAPDAPAPPPLFRYCANDQTYDIVFPDWSFWGWPE 262

[Close]

BLAST of CmaCh16G001280 vs. TrEMBL
Match: W9QYW4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001025 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-33
Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           ++  M+E A+  A+FRLV+V GKAYVET++KA+Q+R   TLWGI+ LL  YPG++PDL+L
Sbjct: 132 ISRDMVERAKRTANFRLVIVNGKAYVETFQKAFQTRDVFTLWGILQLLRKYPGRVPDLEL 191

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   +  K YSGPD   PPPLFRY GDD+T DIVFPDWSFWG  E
Sbjct: 192 MFDCVDWPVVLSKAYSGPDATTPPPLFRYCGDDSTLDIVFPDWSFWGWPE 241

[Close]

BLAST of CmaCh16G001280 vs. TAIR10
Match: AT2G45830.1 (AT2G45830.1 downstream target of AGL15 2)

HSP 1 Score: 140.6 bits (353), Expect = 6.1e-34
Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T  MLE+A+  AHFR+V+++G+ YV+ Y K+ Q+R   TLWGIV LL  YPG+LPDL+L
Sbjct: 138 VTRGMLEKARRTAHFRVVILDGRVYVKKYRKSIQTRDVFTLWGIVQLLRWYPGRLPDLEL 197

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF  +DR  +  KD+ G   P PPPLFRY  DDA+ DIVFPDWSFWG  E
Sbjct: 198 MFDPDDRPTVRSKDFQGQQHPAPPPLFRYCSDDASLDIVFPDWSFWGWAE 247

[Close]

BLAST of CmaCh16G001280 vs. TAIR10
Match: AT3G61270.1 (AT3G61270.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 135.2 bits (339), Expect = 2.6e-32
Identity = 64/110 (58.18%), Postives = 78/110 (70.91%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T  M+EEA   AHFRLV+  GKAYV+ Y+K+ Q+R   TLWGI+ LL  YPGKLPDL+L
Sbjct: 116 ITRGMIEEASRTAHFRLVIRNGKAYVKRYKKSIQTRDEFTLWGILQLLRWYPGKLPDLEL 175

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF  +DR  +   D+ G  K  PPP+FRY  DDA+ DIVFPDWSFWG  E
Sbjct: 176 MFDADDRPVVRSVDFIGQQK-EPPPVFRYCSDDASLDIVFPDWSFWGWAE 224

[Close]

BLAST of CmaCh16G001280 vs. TAIR10
Match: AT1G63420.1 (AT1G63420.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 130.6 bits (327), Expect = 6.3e-31
Identity = 62/113 (54.87%), Postives = 78/113 (69.03%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T  M+E  +  AHFRLV++ GK +VE Y+K+ Q+R   TLWGI+ LL  YPGKLPD+DL
Sbjct: 189 ITKEMVERGKTTAHFRLVILNGKVFVENYKKSIQTRDAFTLWGILQLLRKYPGKLPDVDL 248

Query: 61  MFSCNDRLEIYQKDYSGPDKP---PPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C+DR  I    Y+  ++     PPPLFRY GD  T DIVFPDWSFWG +E
Sbjct: 249 MFDCDDRPVIRSDGYNILNRTVENAPPPLFRYCGDRWTVDIVFPDWSFWGWQE 301

[Close]

BLAST of CmaCh16G001280 vs. TAIR10
Match: AT3G48980.1 (AT3G48980.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 130.6 bits (327), Expect = 6.3e-31
Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T   LE A   A FRL ++ G+ YVE + +A+Q+R   T+WG V LL  YPGK+PDL+L
Sbjct: 155 ITREALERANATAIFRLAIINGRIYVEKFREAFQTRDVFTIWGFVQLLRRYPGKIPDLEL 214

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   +   +++G D+PPPPPLFRY  +D T DIVFPDWS+WG  E
Sbjct: 215 MFDCVDWPVVKAAEFAGVDQPPPPPLFRYCANDETLDIVFPDWSYWGWAE 264

[Close]

BLAST of CmaCh16G001280 vs. TAIR10
Match: AT2G45840.1 (AT2G45840.1 Arabidopsis thaliana protein of unknown function (DUF821))

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-30
Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T   LE A +KAHFRL++  G+ YV  Y+K++Q+R   T+WGIV LL  YPG++PDL+L
Sbjct: 138 ITRETLERASDKAHFRLIIKGGRVYVHQYKKSFQTRDVFTIWGIVQLLRMYPGQVPDLEL 197

Query: 61  MFSCNDRLEIYQKDYSGPDKP------PPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           +F C+D  EI+++DY    +P      PPPPLF Y G    +DIVFPDWSFWG  E
Sbjct: 198 LFMCHDSPEIWRRDYR--PRPGVNVTWPPPPLFHYCGHSGAFDIVFPDWSFWGWPE 251

[Close]

BLAST of CmaCh16G001280 vs. NCBI nr
Match: gi|659077474|ref|XP_008439224.1| (PREDICTED: protein O-glucosyltransferase 1-like [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 7.0e-48
Identity = 89/110 (80.91%), Postives = 98/110 (89.09%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T SMLEEAQ KAHFRL+VVEGKAYVE Y KAYQSR N+T+WG+V LL  YPGK+PDLDL
Sbjct: 105 ITKSMLEEAQKKAHFRLLVVEGKAYVEAYGKAYQSRDNLTVWGVVQLLRRYPGKVPDLDL 164

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF+C+DR EIYQKDYSGP+KP PPPLFRYSGDDATWDIVFPDWSFWG  E
Sbjct: 165 MFNCDDRPEIYQKDYSGPEKPAPPPLFRYSGDDATWDIVFPDWSFWGWPE 214

[Close]

BLAST of CmaCh16G001280 vs. NCBI nr
Match: gi|778688550|ref|XP_011652774.1| (PREDICTED: protein O-glucosyltransferase 1-like [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T SMLEEAQ KAHFR+VVVEGKAYVE Y KAYQSR N+T+WG+V LL  YPGKLPDLDL
Sbjct: 58  ITKSMLEEAQKKAHFRVVVVEGKAYVEAYGKAYQSRDNLTVWGVVQLLRRYPGKLPDLDL 117

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MFSC+DR EIYQKDYSG +KP PPPLFRYSGDDATWDIVFPDWSFWG  E
Sbjct: 118 MFSCDDRPEIYQKDYSGAEKPSPPPLFRYSGDDATWDIVFPDWSFWGWPE 167

[Close]

BLAST of CmaCh16G001280 vs. NCBI nr
Match: gi|700202237|gb|KGN57370.1| (hypothetical protein Csa_3G182060 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-47
Identity = 90/110 (81.82%), Postives = 97/110 (88.18%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T SMLEEAQ KAHFR+VVVEGKAYVE Y KAYQSR N+T+WG+V LL  YPGKLPDLDL
Sbjct: 137 ITKSMLEEAQKKAHFRVVVVEGKAYVEAYGKAYQSRDNLTVWGVVQLLRRYPGKLPDLDL 196

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MFSC+DR EIYQKDYSG +KP PPPLFRYSGDDATWDIVFPDWSFWG  E
Sbjct: 197 MFSCDDRPEIYQKDYSGAEKPSPPPLFRYSGDDATWDIVFPDWSFWGWPE 246

[Close]

BLAST of CmaCh16G001280 vs. NCBI nr
Match: gi|449446159|ref|XP_004140839.1| (PREDICTED: protein O-glucosyltransferase 1-like [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 2.9e-33
Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T + LE  Q  A+FRL+++ GKAYVETY+K++Q+R   T+WGI+ LL  YPGK+PDLDL
Sbjct: 155 ITRATLEAGQRTANFRLLILNGKAYVETYKKSFQTRDTFTVWGILQLLRRYPGKVPDLDL 214

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   I    +SGP+ P PPPLFRY GDDAT+DIVFPDWSFWG  E
Sbjct: 215 MFDCVDWPVILTSHFSGPNGPTPPPLFRYCGDDATFDIVFPDWSFWGWPE 264

[Close]

BLAST of CmaCh16G001280 vs. NCBI nr
Match: gi|643706146|gb|KDP22278.1| (hypothetical protein JCGZ_26109 [Jatropha curcas])

HSP 1 Score: 149.4 bits (376), Expect = 3.7e-33
Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 1


Query: 1   MTMSMLEEAQNKAHFRLVVVEGKAYVETYEKAYQSRGNVTLWGIVPLLPNYPGKLPDLDL 60
           +T  MLE A+  A+FRLV+++GK Y+E Y+KA+Q+R   TLWGI+ LL  YPGK+PDL+L
Sbjct: 113 ITRDMLERARRTANFRLVILKGKVYIERYQKAFQTRDVFTLWGIIQLLRRYPGKVPDLEL 172

Query: 61  MFSCNDRLEIYQKDYSGPDKPPPPPLFRYSGDDATWDIVFPDWSFWGLKE 111
           MF C D   I   DYSGP+   PPPLFRY GDD T+DIVFPDWSFWG  E
Sbjct: 173 MFDCVDWPVIKSSDYSGPNATAPPPLFRYCGDDDTFDIVFPDWSFWGWPE 222

The following BLAST results are available for this feature:

BLAST of CmaCh16G001280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh16G001280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5W0_CUCSA	8.3e-48	81.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182060 PE=4 SV=1	[more]
A0A0A0L5W3_CUCSA	2.0e-33	60.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182110 PE=4 SV=1	[more]
A0A067JHM5_JATCU	2.6e-33	60.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26109 PE=4 SV=1	[more]
V4SDX7_9ROSI	2.6e-33	60.91	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004696mg PE=4 SV=1	[more]
W9QYW4_9ROSA	3.4e-33	60.91	Uncharacterized protein OS=Morus notabilis GN=L484_001025 PE=4 SV=1	[more]

BLAST of CmaCh16G001280 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45830.1	6.1e-34	57.27	downstream target of AGL15 2	[more]
AT3G61270.1	2.6e-32	58.18	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT1G63420.1	6.3e-31	54.87	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT3G48980.1	6.3e-31	51.82	Arabidopsis thaliana protein of unknown function (DUF821)	[more]
AT2G45840.1	2.4e-30	50.86	Arabidopsis thaliana protein of unknown function (DUF821)	[more]

BLAST of CmaCh16G001280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077474\|ref\|XP_008439224.1\|	7.0e-48	80.91	PREDICTED: protein O-glucosyltransferase 1-like [Cucumis melo]	[more]
gi\|778688550\|ref\|XP_011652774.1\|	1.2e-47	81.82	PREDICTED: protein O-glucosyltransferase 1-like [Cucumis sativus]	[more]
gi\|700202237\|gb\|KGN57370.1\|	1.2e-47	81.82	hypothetical protein Csa_3G182060 [Cucumis sativus]	[more]
gi\|449446159\|ref\|XP_004140839.1\|	2.9e-33	60.91	PREDICTED: protein O-glucosyltransferase 1-like [Cucumis sativus]	[more]
gi\|643706146\|gb\|KDP22278.1\|	3.7e-33	60.91	hypothetical protein JCGZ_26109 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006598	LipoPS_modifying

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G001280.1	CmaCh16G001280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006598	Lipopolysaccharide-modifying protein	PFAM	PF05686	Glyco_transf_90	coord: 2..110 score: 7.9
None	No IPR available	PANTHER	PTHR12203	KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED	coord: 1..107 score: 2.1
None	No IPR available	PANTHER	PTHR12203:SF32	SUBFAMILY NOT NAMED	coord: 1..107 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh16G001280	Lsi09G002760	Bottle gourd (USVL1VR-Ls)	cmalsiB302
CmaCh16G001280	CsGy3G016970	Cucumber (Gy14) v2	cgybcmaB342

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh16G001280	Melon (DHL92) v3.6.1	cmamedB338
CmaCh16G001280	Melon (DHL92) v3.6.1	cmamedB344
CmaCh16G001280	Silver-seed gourd	carcmaB0994
CmaCh16G001280	Silver-seed gourd	carcmaB1031
CmaCh16G001280	Silver-seed gourd	carcmaB1366
CmaCh16G001280	Cucumber (Chinese Long) v3	cmacucB0376
CmaCh16G001280	Cucumber (Chinese Long) v3	cmacucB0383
CmaCh16G001280	Cucumber (Chinese Long) v3	cmacucB0406
CmaCh16G001280	Watermelon (97103) v2	cmawmbB330
CmaCh16G001280	Watermelon (97103) v2	cmawmbB344
CmaCh16G001280	Watermelon (97103) v2	cmawmbB346
CmaCh16G001280	Wax gourd	cmawgoB0429
CmaCh16G001280	Wax gourd	cmawgoB0433
CmaCh16G001280	Cucurbita maxima (Rimu)	cmacmaB338
CmaCh16G001280	Cucurbita maxima (Rimu)	cmacmaB346
CmaCh16G001280	Cucurbita maxima (Rimu)	cmacmaB359
CmaCh16G001280	Cucumber (Gy14) v1	cgycmaB0248
CmaCh16G001280	Cucumber (Gy14) v1	cgycmaB0832
CmaCh16G001280	Cucurbita moschata (Rifu)	cmacmoB322
CmaCh16G001280	Cucurbita moschata (Rifu)	cmacmoB327
CmaCh16G001280	Cucurbita moschata (Rifu)	cmacmoB333
CmaCh16G001280	Wild cucumber (PI 183967)	cmacpiB335
CmaCh16G001280	Wild cucumber (PI 183967)	cmacpiB348
CmaCh16G001280	Cucumber (Chinese Long) v2	cmacuB329
CmaCh16G001280	Cucumber (Chinese Long) v2	cmacuB344
CmaCh16G001280	Melon (DHL92) v3.5.1	cmameB285
CmaCh16G001280	Melon (DHL92) v3.5.1	cmameB296
CmaCh16G001280	Watermelon (Charleston Gray)	cmawcgB292
CmaCh16G001280	Watermelon (Charleston Gray)	cmawcgB296
CmaCh16G001280	Watermelon (97103) v1	cmawmB316
CmaCh16G001280	Watermelon (97103) v1	cmawmB320
CmaCh16G001280	Cucurbita pepo (Zucchini)	cmacpeB339
CmaCh16G001280	Cucurbita pepo (Zucchini)	cmacpeB344
CmaCh16G001280	Cucurbita pepo (Zucchini)	cmacpeB358
CmaCh16G001280	Bottle gourd (USVL1VR-Ls)	cmalsiB312
CmaCh16G001280	Bottle gourd (USVL1VR-Ls)	cmalsiB320
CmaCh16G001280	Cucumber (Gy14) v2	cgybcmaB621