CmaCh16G000790 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGGCGGGGTCCCACAAGCAGAAACGGTTCTATAAAATTCATTCCTCAACAAATCACCATCAGTTTTCTATCTCTGTCGTTTCTCGTCCTCATCCTCTCTTCGTCATCTTCACAAACCCTCACACCAGACCTACAGCGCCTTCACGAGGACCTCTCTCGTGTAAGACTTCCTTTTTTCTTTTTCTTTTTTTCCTTAAAAACGACAATTTTTCTCTTTTGCTTTGCCTCTTTTGTTGATGTTTTTGAACCAGTTTCAGCCCTGATCTGATGTTTGGATTTGGATTCTGGATCTTATAGATTTTTGTTAGCTTTTTCGGATGGCGTCGAAGAGGATCTTGAAGGAACTCAAGGATTTGCAGAAGGACCCTCCTACATCATGTAGCGCTGGTATGAAACTATTTTCCTATTTTCTTTTCATTTTTTTTAAATATTGTTTTGATTTCCTTGAATTGATTGGTATTATAATATTCACTGTTCTATTTTGCTACTTGCCTTCATCTGGTTGTCTGTTCGGTCTTCTTTGCTGTACTTGCTAATTATATAACCGTTTTTGTTATCGGTTTTTCCTGAAAATGTGAGCTGATGATTGTCTTAAGGAATTTTTAGGCGGAGTTTGTTGTGTAAAATTTGTAGGGGTTGCTTTACCATCTGATAGAATAATGATCGTCCGATCATCCCACCATGGTTTATGAAAAGGAAATTTAGTCGATGAATTCCCTATGTGAAATTTATGAGAATTTTGTTCGATTGTGTGTCTGAGCATCTCAGTTGTTCAAATTCTTAGATTATTTCTTCCGGAAGTTTCTCTTTGAGCCTTCCACCTTAGTTGTTTTGGTGTAATTATGCATGGTGAGAAGAGATGATGTCTTCATTGCGTTGTAAACGTTTATGGAAGCAATTTTGAGCAGTTTAGCTTGGGATACTCACATCTGGAACTGAAGTTTTGAATTTTAAACTCCTTGTCACCTTGAATACTTCTTGCTTCCAAAAACGAAGTTATCATGTAAATTGATTGATTGGGCATGAATATCGAGGTAGTATTGCCTTTGTTAGTTTGTTTCACCCCTGTTGCTGAATTTAGAGTATTTGCATATGCATGAGATTTAAGACTGGGTTTAAGGATCTACATTTTTTTCTTCCTTCAGATTTATTTGTGCTTTGAGTTTTTGGTATATCCCAAATGGTCTTAATAGTTAGAACAGTAAGTTTCTATTGAGGTGCTGACTCATGTAAGAATTTCCTCAGGCCCAGTTGCGGAAGATATGTTTCATTGGCAAGCTACCATAATGGGTCCTCCAGACAGTCCTTATGCTGGGGGTGTTTTCCTTGTCACCATTCATTTTCCTCCGGATTATCCTTTTAAGCCTCCTAAGGTATGACACTTTCTTTTAAATTAATAGTTACTGTTGAACTTGTGTGTCCTAGCATGTCTAACGTATGCTGTTGATCTTGATCTTGCCTTCTCATCTTTCTCATTTGATCTTCAAGATCAACTATTGTCAGCTTAACGAGCTTTAGTAGCAGAGTATGTACTTTGGTTTGCGACCATGCATTTACATCTTTAGTTGATAGTTGATCAATCATACATGCATTTGTCTGTTCAGTTTTTTGACATAAGTTTTCCAAAAAAATGTTAGTATGTTGTCTTGAGACCGTCTCCAATATATTAAAGGGAGAGGTTTAGTCAGATGCTAGGTTACCTTTGGGTATTGGTGTTCAAAGATTTTTGTAATTTCCCTCTAGGTCTTGTCATTTTGAATTAGATCCTTCTTGCATAGCTAGGTGAGTGGCTTTTGAGCTGTTTCTTAAAATGTCATCTTGTATTCTTTCATTCTTAATGAAATCTTGGTTTTCCATTAAAACAAAAATATGTGTATGTTATAGGGGGAGGTCCAAGGCAGAAGTACTATGTAGGATAGTTTCTTTGTCTTGCCGCATCATCTGTTTGTAACTTTACTTTACTGCAAGGGGTATTGCTTATGATTAGATGAAGTGGGCATATGGGTCTGACAACCTTATCAAATAGATGGTGACTCATACACCAAGATATCTTGCCTAAGAAAAATCGTGATGCTTCTGCATTTGTCTTGTTATGGATTTTATTGGAAGCAACTTTCTTATTTCCTCCTCTCACGATTGGATTTGCAGGTGGCATTTAGAACAAAGGTTTTCCACCCAAATATCAACAGCAATGGTAGTATTTGCCTTGACATTTTGAAAGAGCAGTGGAGCCCGGCCCTAACTATTTCCAAGGTTTGTCCATTCACTTAAAAAAGCAAAGAAAAAAGAGGTTTTGCTGTCTTTGCCATTTTTTTAAGCTAGTCTTATGATCATGACCTATCTTGACGAGCTTTCCTCTTGCTAGTTCCTTTAGCATAGTTATACCGATGCGATGATTCCGTATGCCTTTTGAAAGATGGTGCAAACATGGACCATCATCTCCTCTCCCAATTTAGATAGAAAAAATAACTCAACTAAGAATGGCGCTAACCTTTTTGCTCTACTGATGTTATGAAACAATATCCTTCTGACCTCGTCTTCATCAACAATATAGCTCTGGTTATTGGATGGGTTGATCTCCCTCGACTAAACTGTTTTTTCGTTGTATGGGATGTGGATATCTCTTGGTTGCACCTTGATACTTGAATGCTTATGATGCTAATAAATGATCTGTTTCATGACTACTGATTAATCTTGAATGTGCTTATATAACTAGGTGTTACTTTCAATCTGTTCTCTGTTGACGGACCCAAATCCGGATGACCCACTGGTGCCTGAGATCGCTCACATGTACAAGACTGACAGGAACAAATACGAGACAACTGCTAGGAGCTGGACGCAGAAGTACGCCATGGGGTGAGCAGCGATGGTGACTCAATGAATGCCATTTAGGTTGTCCAAATTTTTATGCTCACCTGCCTGTTCTATATATGAATCTTTATGTCGGTCTGTTGCAACCATCCTATGCTGCTGCTGCTGCTTGAGCAAAGAAATGTCGTTAACATTTCCCTTTCATTCCAATTGGAAAATATTTTCTTATTTGGTTGTGGATTAATATAATATAATATATAGGACCCTAAAATGTATCTTCGGTTCTGTCTCCATGTTCCTCTCTGCTCTTTTACTTCGCTCATCATAGACCAGACATTGTACATTTCTTTAAAAGAAAATGTTAAACAGCTTTATAAAAAAAATGTAACTGTAT TGGGGCGGGGTCCCACAAGCAGAAACGGTTCTATAAAATTCATTCCTCAACAAATCACCATCAGTTTTCTATCTCTGTCGTTTCTCGTCCTCATCCTCTCTTCGTCATCTTCACAAACCCTCACACCAGACCTACAGCGCCTTCACGAGGACCTCTCTCGTATTTTTGTTAGCTTTTTCGGATGGCGTCGAAGAGGATCTTGAAGGAACTCAAGGATTTGCAGAAGGACCCTCCTACATCATGTAGCGCTGGCCCAGTTGCGGAAGATATGTTTCATTGGCAAGCTACCATAATGGGTCCTCCAGACAGTCCTTATGCTGGGGGTGTTTTCCTTGTCACCATTCATTTTCCTCCGGATTATCCTTTTAAGCCTCCTAAGGTGGCATTTAGAACAAAGGTTTTCCACCCAAATATCAACAGCAATGGTAGTATTTGCCTTGACATTTTGAAAGAGCAGTGGAGCCCGGCCCTAACTATTTCCAAGGTGTTACTTTCAATCTGTTCTCTGTTGACGGACCCAAATCCGGATGACCCACTGGTGCCTGAGATCGCTCACATGTACAAGACTGACAGGAACAAATACGAGACAACTGCTAGGAGCTGGACGCAGAAGTACGCCATGGGGTGAGCAGCGATGGTGACTCAATGAATGCCATTTAGGTTGTCCAAATTTTTATGCTCACCTGCCTGTTCTATATATGAATCTTTATGTCGGTCTGTTGCAACCATCCTATGCTGCTGCTGCTGCTTGAGCAAAGAAATGTCGTTAACATTTCCCTTTCATTCCAATTGGAAAATATTTTCTTATTTGGTTGTGGATTAATATAATATAATATATAGGACCCTAAAATGTATCTTCGGTTCTGTCTCCATGTTCCTCTCTGCTCTTTTACTTCGCTCATCATAGACCAGACATTGTACATTTCTTTAAAAGAAAATGTTAAACAGCTTTATAAAAAAAATGTAACTGTAT ATGGCGTCGAAGAGGATCTTGAAGGAACTCAAGGATTTGCAGAAGGACCCTCCTACATCATGTAGCGCTGGCCCAGTTGCGGAAGATATGTTTCATTGGCAAGCTACCATAATGGGTCCTCCAGACAGTCCTTATGCTGGGGGTGTTTTCCTTGTCACCATTCATTTTCCTCCGGATTATCCTTTTAAGCCTCCTAAGGTGGCATTTAGAACAAAGGTTTTCCACCCAAATATCAACAGCAATGGTAGTATTTGCCTTGACATTTTGAAAGAGCAGTGGAGCCCGGCCCTAACTATTTCCAAGGTGTTACTTTCAATCTGTTCTCTGTTGACGGACCCAAATCCGGATGACCCACTGGTGCCTGAGATCGCTCACATGTACAAGACTGACAGGAACAAATACGAGACAACTGCTAGGAGCTGGACGCAGAAGTACGCCATGGGGTGA MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG
BLAST of CmaCh16G000790 vs. Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.1e-82 Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 1
BLAST of CmaCh16G000790 vs. Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 1.5e-82 Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1
BLAST of CmaCh16G000790 vs. Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 1.9e-82 Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 1
BLAST of CmaCh16G000790 vs. Swiss-Prot
Match: UBC28_ARATH (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 4.3e-82 Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1
BLAST of CmaCh16G000790 vs. Swiss-Prot
Match: UBC5B_ORYSJ (Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica GN=UBC5B PE=2 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 2.8e-81 Identity = 142/148 (95.95%), Postives = 145/148 (97.97%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TrEMBL
Match: A0A0B0N429_GOSAR (Ubiquitin-conjugating enzyme E2 10-like protein OS=Gossypium arboreum GN=F383_31807 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 7.9e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TrEMBL
Match: B3TLN8_ELAGV (Ubiquitin conjugating enzyme OS=Elaeis guineensis var. tenera PE=2 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 7.9e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TrEMBL
Match: A0A0D2R481_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G135900 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 7.9e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TrEMBL
Match: D3GC05_JATCU (Ubiquitin conjugating enzyme 2 OS=Jatropha curcas GN=E2 PE=2 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 7.9e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TrEMBL
Match: M5XDZ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012628mg PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 7.9e-83 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10) HSP 1 Score: 307.0 bits (785), Expect = 6.3e-84 Identity = 144/148 (97.30%), Postives = 147/148 (99.32%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9) HSP 1 Score: 306.2 bits (783), Expect = 1.1e-83 Identity = 143/148 (96.62%), Postives = 147/148 (99.32%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11) HSP 1 Score: 301.6 bits (771), Expect = 2.7e-82 Identity = 139/148 (93.92%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8) HSP 1 Score: 295.4 bits (755), Expect = 1.9e-80 Identity = 141/149 (94.63%), Postives = 144/149 (96.64%), Query Frame = 1
BLAST of CmaCh16G000790 vs. TAIR10
Match: AT5G56150.1 (AT5G56150.1 ubiquitin-conjugating enzyme 30) HSP 1 Score: 285.8 bits (730), Expect = 1.5e-77 Identity = 132/148 (89.19%), Postives = 141/148 (95.27%), Query Frame = 1
BLAST of CmaCh16G000790 vs. NCBI nr
Match: gi|596009469|ref|XP_007218529.1| (hypothetical protein PRUPE_ppa012628mg [Prunus persica]) HSP 1 Score: 314.3 bits (804), Expect = 1.1e-82 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. NCBI nr
Match: gi|821325067|ref|NP_001295745.1| (ubiquitin-conjugating enzyme E2 10 [Jatropha curcas]) HSP 1 Score: 314.3 bits (804), Expect = 1.1e-82 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. NCBI nr
Match: gi|823182632|ref|XP_012488575.1| (PREDICTED: ubiquitin-conjugating enzyme E2 10 [Gossypium raimondii]) HSP 1 Score: 313.2 bits (801), Expect = 2.5e-82 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. NCBI nr
Match: gi|763772336|gb|KJB39459.1| (hypothetical protein B456_007G014500 [Gossypium raimondii]) HSP 1 Score: 313.2 bits (801), Expect = 2.5e-82 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1
BLAST of CmaCh16G000790 vs. NCBI nr
Match: gi|449456367|ref|XP_004145921.1| (PREDICTED: ubiquitin-conjugating enzyme E2 10 [Cucumis sativus]) HSP 1 Score: 313.2 bits (801), Expect = 2.5e-82 Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|