CmaCh16G000720 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G000720
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionBasic helix loop helix (BHLH) DNA-binding family protein
LocationCma_Chr16 : 305173 .. 307123 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATATATTTTTTCCTCCATTTTCCTCTATCTATCTGGGTCCTTTTCTTTCCCTTTTTCAACACAAAAGCTCCAAACTTTGTGTTTCTTTAGCCCAACAGAACAAAAGGGTACCACGATGGTTGATAATTTAGCTGATTTTTTCCAACAAAATGAAGAATTTGTCGACCATACCACAAACCCCCAGTTGGAAGGAGGATATGACCTCTTCAGCATCTTTGATACTTTGGAGAATGTTGCAGAATTCAGTATGATCGAGGACGACACCGAGCTTGAGACTTCCCCTAAAACCAAGCGCTTGAAAGTGACGGCAGCGACGTCTCCGACCACCGCTATGGCTGGTGTCTCTTCCTCAGAGGATGCAAACCCTGACGGAGCACAAAGAATGTCTCACATCACGGTAGAGCGCAACCGTAGGAAGCAAATGAACGAGCACTTGTCGGTGTTGAGATCGCTCATGCCTTGTTTCTATGTCAAGAAAGTATGTTGAAATTTTTTGAGAATATGATTTCATTTCAGGGTTTTGTGTTGAATAACATTATATTGTTGTTGAATGTGGTTTTAGGGAGATCAAGCTTCAATAATTGGAGGGGTGGTGGAATACATCAAAGAGTTGCAACAAGTTCTTCAATCACTAGAGGCCAAAAAGCAAAGGAAAGTGTATAGTGAAGTGTTGAGCCCTAGGGTTGTTGTTTCAAGTCCAAGGCCTTTCCCAATGAGTCCAAGAAAGCCACCACCACTAAGTCCTCGCCTTAACTTGCCAATTAGTCCAAGAACCCCACAACCCACTAGCCCTTACAGCAAGCCTCCAAGGTTGCAACAGCCTCCCACCACCGATATGGCTAATAACAACAACAGCACAGGCGAGCCATCGCCCTGTAATTCATCTTCCACCACAAATTCCTCCATTGACAATGGTAACAATGGTAACAATGATCTTGTGGCGAATTCAAAATCCGGCATAGCTGAGGTTGAGGTGAAGTTTACAGGTCCAAATGTGGTTTTGAAGACAGTTTCTGCACCGATCCCTGGACAAGCTGTGAAGATCATTGCTGCCCTTGAACAACTCTCACTTGAAATTCTCCATGTCAAGATCACCACCGTTGATGATACCATGTTTAACTCTTTTACAATTAAGGTACACAATCTTTTTTTATTTGATTTTTTCAAAACTAAGTTTATAAACACAATTTCAAAACCAAACAAAAGATGTTTTAATTATCAAAGGGGAGTGAAGTTACTAGCTTTCACTACTCTTTGGCCTCGTTTTCCGTGCAGCTTTCCTTTTTTTTTTTTTTTTTTTTTTTAAATTCTTGTTTTATGAGAATCATTTCGTAACTCATTAAGGGTTTTGGGTTTAAGAGAATTGAAGTCATCAATTTGAGAAAGATTTCATCTGGGGTTTTCTTCTCTTAAAAAAAAAAAAAGAATTTCATTGAAATGATATGTGGGTTGTGTTTCGTTTTGTGTATTTTGAGCACAAGCACCAAAGCACTCCATTGTTTGCCATGTTGAAGGTTCGTTTAAGCTCACAGATGGCTTCCATGCATGAACAAAAAATGGCTCGAATTGCCGTGCTGAAATGATACCCATTTTTGCATGTTCAGAGGAGAAAAATCCCAGCTTTATACGCAAATTTGCATCTTTTTTCGTTTTATCTTCACTGAGGGATTGTTTATTTTACTTTTATAGATCGGAATTGAATGCCAACTTAGTGCAGAGGAACTGGCTCACCAAATTCAGCAAACATTCTGCTAATTGAAGTCCAGAATTGGAGGAGGAGGAGGAGTTTTGGTTACTTAATTGTGTCTGCACAAAGGGAATCCTCTTAACAAATTAATGTAACTCTCTTTCTTCAATTCTTTTTTCAACCAAAATTCCTCTTTTCATTTATGTAATAGATAGACGCAATCTCATCCCTCTCATCATCAAAAACTACTAAAAACTCCTAAG

mRNA sequence

AATATATTTTTTCCTCCATTTTCCTCTATCTATCTGGGTCCTTTTCTTTCCCTTTTTCAACACAAAAGCTCCAAACTTTGTGTTTCTTTAGCCCAACAGAACAAAAGGGTACCACGATGGTTGATAATTTAGCTGATTTTTTCCAACAAAATGAAGAATTTGTCGACCATACCACAAACCCCCAGTTGGAAGGAGGATATGACCTCTTCAGCATCTTTGATACTTTGGAGAATGTTGCAGAATTCAGTATGATCGAGGACGACACCGAGCTTGAGACTTCCCCTAAAACCAAGCGCTTGAAAGTGACGGCAGCGACGTCTCCGACCACCGCTATGGCTGGTGTCTCTTCCTCAGAGGATGCAAACCCTGACGGAGCACAAAGAATGTCTCACATCACGGTAGAGCGCAACCGTAGGAAGCAAATGAACGAGCACTTGTCGGTGTTGAGATCGCTCATGCCTTGTTTCTATGTCAAGAAAGGAGATCAAGCTTCAATAATTGGAGGGGTGGTGGAATACATCAAAGAGTTGCAACAAGTTCTTCAATCACTAGAGGCCAAAAAGCAAAGGAAAGTGTATAGTGAAGTGTTGAGCCCTAGGGTTGTTGTTTCAAGTCCAAGGCCTTTCCCAATGAGTCCAAGAAAGCCACCACCACTAAGTCCTCGCCTTAACTTGCCAATTAGTCCAAGAACCCCACAACCCACTAGCCCTTACAGCAAGCCTCCAAGGTTGCAACAGCCTCCCACCACCGATATGGCTAATAACAACAACAGCACAGGCGAGCCATCGCCCTGTAATTCATCTTCCACCACAAATTCCTCCATTGACAATGGTAACAATGGTAACAATGATCTTGTGGCGAATTCAAAATCCGGCATAGCTGAGGTTGAGGTGAAGTTTACAGGTCCAAATGTGGTTTTGAAGACAGTTTCTGCACCGATCCCTGGACAAGCTGTGAAGATCATTGCTGCCCTTGAACAACTCTCACTTGAAATTCTCCATGTCAAGATCACCACCGTTGATGATACCATGTTTAACTCTTTTACAATTAAGATCGGAATTGAATGCCAACTTAGTGCAGAGGAACTGGCTCACCAAATTCAGCAAACATTCTGCTAATTGAAGTCCAGAATTGGAGGAGGAGGAGGAGTTTTGGTTACTTAATTGTGTCTGCACAAAGGGAATCCTCTTAACAAATTAATGTAACTCTCTTTCTTCAATTCTTTTTTCAACCAAAATTCCTCTTTTCATTTATGTAATAGATAGACGCAATCTCATCCCTCTCATCATCAAAAACTACTAAAAACTCCTAAG

Coding sequence (CDS)

ATGGTTGATAATTTAGCTGATTTTTTCCAACAAAATGAAGAATTTGTCGACCATACCACAAACCCCCAGTTGGAAGGAGGATATGACCTCTTCAGCATCTTTGATACTTTGGAGAATGTTGCAGAATTCAGTATGATCGAGGACGACACCGAGCTTGAGACTTCCCCTAAAACCAAGCGCTTGAAAGTGACGGCAGCGACGTCTCCGACCACCGCTATGGCTGGTGTCTCTTCCTCAGAGGATGCAAACCCTGACGGAGCACAAAGAATGTCTCACATCACGGTAGAGCGCAACCGTAGGAAGCAAATGAACGAGCACTTGTCGGTGTTGAGATCGCTCATGCCTTGTTTCTATGTCAAGAAAGGAGATCAAGCTTCAATAATTGGAGGGGTGGTGGAATACATCAAAGAGTTGCAACAAGTTCTTCAATCACTAGAGGCCAAAAAGCAAAGGAAAGTGTATAGTGAAGTGTTGAGCCCTAGGGTTGTTGTTTCAAGTCCAAGGCCTTTCCCAATGAGTCCAAGAAAGCCACCACCACTAAGTCCTCGCCTTAACTTGCCAATTAGTCCAAGAACCCCACAACCCACTAGCCCTTACAGCAAGCCTCCAAGGTTGCAACAGCCTCCCACCACCGATATGGCTAATAACAACAACAGCACAGGCGAGCCATCGCCCTGTAATTCATCTTCCACCACAAATTCCTCCATTGACAATGGTAACAATGGTAACAATGATCTTGTGGCGAATTCAAAATCCGGCATAGCTGAGGTTGAGGTGAAGTTTACAGGTCCAAATGTGGTTTTGAAGACAGTTTCTGCACCGATCCCTGGACAAGCTGTGAAGATCATTGCTGCCCTTGAACAACTCTCACTTGAAATTCTCCATGTCAAGATCACCACCGTTGATGATACCATGTTTAACTCTTTTACAATTAAGATCGGAATTGAATGCCAACTTAGTGCAGAGGAACTGGCTCACCAAATTCAGCAAACATTCTGCTAA

Protein sequence

MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFSMIEDDTELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQPPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQQTFC
Homology
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BLAST of CmaCh16G000720 vs. Swiss-Prot
Match: SPCH_ARATH (Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-83
Identity = 211/372 (56.72%), Postives = 254/372 (68.28%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFS---------------- 60
           M + + DF ++ E FVD +       G DLF+I ++LE   E S                
Sbjct: 1   MQEIIPDFLEECE-FVDTSL-----AGDDLFAILESLEGAGEISPTAASTPKDGTTSSKE 60

Query: 61  MIEDDTELETSPKTK--RLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQ 120
           +++D     +SPK K  RL+               + ED   DG Q+MSH+TVERNRRKQ
Sbjct: 61  LVKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQ 120

Query: 121 MNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRV 180
           MNEHL+VLRSLMPCFYVK+GDQASIIGGVVEYI ELQQVLQSLEAKKQRK Y+EVLSPR 
Sbjct: 121 MNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPR- 180

Query: 181 VVSSPRPFP--MSPRKPPPLSPRLN----------LPISPRTPQPTSPY-SKPPRL---Q 240
           VV SPRP P  +SPRK PPLSPR+N           PISPRTPQPTSPY + PP+L    
Sbjct: 181 VVPSPRPSPPVLSPRK-PPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIP 240

Query: 241 QPPTTDMAN--NNNSTGEP---SPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKF 300
           QPP    ++  + +S G+P   SP +SSS+ + S ++ ++  N+LVANSKS +A+VEVKF
Sbjct: 241 QPPLRSYSSLASCSSLGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKF 300

Query: 301 TGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSA 334
           +G NV+LKTVS  IPGQ +KIIAALE L+LEIL V I TVD+TM NSFTIKIGIECQLSA
Sbjct: 301 SGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKIGIECQLSA 360

[Close]
BLAST of CmaCh16G000720 vs. Swiss-Prot
Match: MUTE_ARATH (Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-30
Identity = 97/251 (38.65%), Postives = 136/251 (54.18%), Query Frame = 1 

Query: 90  MSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKK 149
           MSHI VERNRR+QMNEHL  LRSL PCFY+K+GDQASIIGGV+E+IKELQQ++Q LE+KK
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 150 QRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTS--------PYSK 209
           +RK  +                           R + P   +T +P+S        P+S 
Sbjct: 61  RRKTLN---------------------------RPSFPYDHQTIEPSSLGAATTRVPFS- 120

Query: 210 PPRLQQPPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKF 269
             R++   TT       +      CNS      +  +G+                     
Sbjct: 121 --RIENVMTTSTFKEVGAC-----CNSPHANVEAKISGS--------------------- 180

Query: 270 TGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSA 329
              NVVL+ VS  I GQ VKII+ LE+LS ++LH+ I+++++T+   F +KIG+EC LS 
Sbjct: 181 ---NVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLSL 192

Query: 330 EELAHQIQQTF 333
           EEL  ++Q++F
Sbjct: 241 EELTLEVQKSF 192

[Close]
BLAST of CmaCh16G000720 vs. Swiss-Prot
Match: FAMA_ARATH (Transcription factor FAMA OS=Arabidopsis thaliana GN=FAMA PE=1 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-19
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1 

Query: 47  EDDTELE--TSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMN 106
           E+D E +  T  + K  +  A TS T        SE+     +QRM+HI VERNRRKQMN
Sbjct: 163 EEDRENKNVTKKEVKSKRKRARTSKT--------SEEVE---SQRMTHIAVERNRRKQMN 222

Query: 107 EHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSE 157
           EHL VLRSLMP  YV++GDQASIIGG +E+++EL+Q+LQ LE++K+R++  E
Sbjct: 223 EHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGE 263

[Close]
BLAST of CmaCh16G000720 vs. Swiss-Prot
Match: BH071_ARATH (Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.8e-19
Identity = 79/234 (33.76%), Postives = 119/234 (50.85%), Query Frame = 1 

Query: 88  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 147
           QRM+HI VERNRR+QMN+HLSVLRSLMP  +  KGDQASI+GG +++IKEL+  L SLEA
Sbjct: 86  QRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEA 145

Query: 148 KKQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQ 207
           +K                               + +LN  ++  T Q ++   + P   Q
Sbjct: 146 QKHH-----------------------------NAKLNQSVTSSTSQDSNGEQENP--HQ 205

Query: 208 PPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVV 267
           P +  ++     + +PS  N + +T+S          DL        A + +        
Sbjct: 206 PSSLSLSQFFLHSYDPSQENRNGSTSSV----KTPMEDLEVTLIETHANIRILSRRRGFR 265

Query: 268 LKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSA 322
             T++   P Q  K++A+L+ LSL ILH+ +TT+D+    S + K+   CQLS+
Sbjct: 266 WSTLATTKPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSS 284

[Close]
BLAST of CmaCh16G000720 vs. Swiss-Prot
Match: BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-18
Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 1 

Query: 88  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 147
           QRM+HI VERNRRKQMNE+L+VLRSLMP  Y ++GDQASI+GG + Y+KEL+ +LQS+E 
Sbjct: 113 QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEP 172

Query: 148 KKQR 152
           K+ R
Sbjct: 173 KRTR 176

[Close]
BLAST of CmaCh16G000720 vs. TrEMBL
Match: A0A0A0L7S9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G354520 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 5.8e-134
Identity = 294/381 (77.17%), Postives = 305/381 (80.05%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFSMIEDD----------- 60
           MVD  AD FQQN+EFVDHT NP  EG  DLFSIF++LENVAEF+MIEDD           
Sbjct: 1   MVDTFADLFQQNDEFVDHTLNPHFEGD-DLFSIFESLENVAEFTMIEDDIEPVKDGEETT 60

Query: 61  ------TELETSPKTKRLKVTAATSPTTAMA--GVSSSEDANPDGAQRMSHITVERNRRK 120
                 TELETSPKTKRLK  AATSPT AM   G+SSSED NPDG QRMSHITVERNRRK
Sbjct: 61  SLVFSETELETSPKTKRLKTIAATSPTAAMTSTGLSSSEDPNPDGPQRMSHITVERNRRK 120

Query: 121 QMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRK-VYSEVLSP 180
           QMNEHL+VLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRK VYSEVLSP
Sbjct: 121 QMNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVVYSEVLSP 180

Query: 181 RVVVSSPRP-FPMSPRKPPPLSPRLNLPISPRTPQPTSPYSK-PPRLQQPP--------- 240
           R VVSSPRP   MSPRK PPLSPRLNLPISPRTPQPTSPYSK PPRLQQPP         
Sbjct: 181 R-VVSSPRPNLAMSPRK-PPLSPRLNLPISPRTPQPTSPYSKPPPRLQQPPSAATGGGAY 240

Query: 241 --------TTDMANNNNSTGEPSPCNSSSTTNSSIDNGN---------NGNNDLVANSKS 300
                   TT+MANNN+   EPSPCNS STTNSSIDN N         N NNDLVANSKS
Sbjct: 241 NIPSSSSSTTNMANNNSL--EPSPCNSCSTTNSSIDNNNNNNNSNSNSNNNNDLVANSKS 300

Query: 301 GIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIK 334
            IAEVEVKFTGPNVVLKTVS PIPGQA KII+ALEQLSLEILHVKITT+D+TMFNSFTIK
Sbjct: 301 AIAEVEVKFTGPNVVLKTVSPPIPGQAFKIISALEQLSLEILHVKITTLDETMFNSFTIK 360

[Close]
BLAST of CmaCh16G000720 vs. TrEMBL
Match: B9RIM0_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1580560 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.8e-98
Identity = 230/365 (63.01%), Postives = 268/365 (73.42%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEF----------------- 60
           M D+++DFF+++E F D+T +     G DLF+IF+TL++V +F                 
Sbjct: 1   MSDSVSDFFEEHE-FGDNTLD-----GEDLFAIFETLDSVTQFPPVTPSNEVVVISKDGG 60

Query: 61  ---------------SMIEDDTELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQ 120
                          +++E +TELETSPK KR K            G++SSE+ NPDG Q
Sbjct: 61  EETTRLVSQKSTSSSAILESETELETSPKNKRQK-----------TGIASSEEINPDGQQ 120

Query: 121 RMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAK 180
           RMSHITVERNRRKQMNEHLSVLRSLMPCFYVK+GDQASIIGGVV YI ELQQVLQ+LEAK
Sbjct: 121 RMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVNYINELQQVLQALEAK 180

Query: 181 KQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQP 240
           KQRKVYSEVLSPR + SSPRP P+SPRK PPLSPRLNLPISPRTPQP SPY   PRLQQ 
Sbjct: 181 KQRKVYSEVLSPR-IASSPRPSPLSPRK-PPLSPRLNLPISPRTPQPGSPYR--PRLQQQ 240

Query: 241 PTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVL 300
               ++    S+ EPSP  SSS   SSI   N+  N+LVANSKS IA+VEVKF+GPN++L
Sbjct: 241 GY--LSPTVASSLEPSPTTSSS---SSI---NDNINELVANSKSAIADVEVKFSGPNLLL 300

Query: 301 KTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQI 334
           KTVS  IPGQA KII+ALE+LSLEILHV ++TVD+TM NSFTIKIGIECQLSAEELA QI
Sbjct: 301 KTVSPRIPGQATKIISALEELSLEILHVNVSTVDETMLNSFTIKIGIECQLSAEELAQQI 336

[Close]
BLAST of CmaCh16G000720 vs. TrEMBL
Match: B9I539_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01370g PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.8e-95
Identity = 228/348 (65.52%), Postives = 265/348 (76.15%), Query Frame = 1 

Query: 1   MVDNLADFFQQNE-EFVDHTTNPQLEGGYDLFSIFDTLENVAEF----------SMIEDD 60
           M ++L+DF ++ + EF D   +       DLF+IF++L++V +F             E +
Sbjct: 1   MTESLSDFLEEVQPEFGDTAFDAD-----DLFAIFESLDSVTDFPPSSSSNALHDFDETN 60

Query: 61  TELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSV 120
            ELETSPK+KR K++A     +A A  SS ++ NPDG QRMSHITVERNRRKQMNEHLSV
Sbjct: 61  NELETSPKSKRQKISA-----SAAATASSDQEVNPDGQQRMSHITVERNRRKQMNEHLSV 120

Query: 121 LRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVVSSPRP 180
           LRSLMPCFYVK+GDQASIIGGVV+YI ELQQVLQSLEAKK+RKVYSEVLSPR +VSSPRP
Sbjct: 121 LRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKKRKVYSEVLSPR-IVSSPRP 180

Query: 181 FPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQ---PPTTDMANNNNSTGEPSPC 240
            P+SPRK PPLSPRLNLPISPRTPQP SPY KP  LQQ    PT  MAN+  S+  PSP 
Sbjct: 181 SPLSPRK-PPLSPRLNLPISPRTPQPCSPY-KPRILQQGYLSPT--MANSLESS--PSPS 240

Query: 241 NSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAAL 300
           +SSS         N+  N+LVANSKS IA+VEVKF+GPNV+LKTVS  IPGQAVKII+AL
Sbjct: 241 SSSSI--------NDNINELVANSKSAIADVEVKFSGPNVLLKTVSPQIPGQAVKIISAL 300

Query: 301 EQLSLEILHVKITTVD-DTMFNSFTIKIGIECQLSAEELAHQIQQTFC 334
           E L+LEILHV I+ VD +TM NSFTIKIGIECQLSAEELA QIQ TFC
Sbjct: 301 EDLALEILHVSISIVDHETMLNSFTIKIGIECQLSAEELAQQIQLTFC 323

[Close]
BLAST of CmaCh16G000720 vs. TrEMBL
Match: E0CUJ9_VITVI (Speechless OS=Vitis vinifera GN=SPCH PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.9e-95
Identity = 224/363 (61.71%), Postives = 262/363 (72.18%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHT--TNPQLEGGYDLFSIFDTLENVAEFSMIED---------- 60
           M D+L+DFF++  EF   T  T        DLFSIF++LE V+E   +E+          
Sbjct: 1   MGDSLSDFFEE-PEFGGETSLTGVASPDDLDLFSIFESLEGVSEVPPLEETVLGSKEGEE 60

Query: 61  ------------------DTELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRM 120
                             +TELE SPK KR K+ A TS          SE+ NPDG QR+
Sbjct: 61  TARLVSQKSTSSSALQESETELEASPKRKRPKLAAPTS----------SEEGNPDGQQRV 120

Query: 121 SHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQ 180
           SHITVERNRRKQMNEHLSVLRSLMPCFYVK+GDQASIIGGVV+YIKELQQVL+SLEAKKQ
Sbjct: 121 SHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKKQ 180

Query: 181 RKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQPPT 240
           RKVYSEVLSPRVV SSPRP P+SPRKPP LSPR++LPISPRTPQPTSPY KP RLQQ   
Sbjct: 181 RKVYSEVLSPRVV-SSPRPPPISPRKPP-LSPRISLPISPRTPQPTSPY-KPVRLQQ--- 240

Query: 241 TDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVLKT 300
             ++     + EPSP +S+S+        N+  N+L+ NSKS IA+VEVK++ PNVVLKT
Sbjct: 241 GYLSPTIAPSLEPSPSSSTSS--------NDNANELIVNSKSAIADVEVKYSCPNVVLKT 300

Query: 301 VSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQQ 334
            S+ IPGQAVKII+ALE LSLEILHV I+++D+TM NSFTIK GIECQLSAEELAHQ+QQ
Sbjct: 301 KSSRIPGQAVKIISALEDLSLEILHVSISSIDETMLNSFTIKFGIECQLSAEELAHQVQQ 338

[Close]
BLAST of CmaCh16G000720 vs. TrEMBL
Match: A0A0N7B3L9_VITRI (Speechless OS=Vitis riparia GN=SPCH PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.5e-94
Identity = 223/363 (61.43%), Postives = 262/363 (72.18%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHT--TNPQLEGGYDLFSIFDTLENVAEFSMIED---------- 60
           M D+L+DFF++  EF   T  T        DLFSIF++LE V+E   +E+          
Sbjct: 1   MGDSLSDFFEE-PEFGGETSLTGVASPDDLDLFSIFESLEGVSEVPPLEETVLGSKEGEE 60

Query: 61  ------------------DTELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRM 120
                             +TELE SPK KR ++ A TS          SE+ NPDG QR+
Sbjct: 61  TARLVSQKSTSSSALQESETELEASPKRKRPRLAAPTS----------SEEGNPDGQQRV 120

Query: 121 SHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQ 180
           SHITVERNRRKQMNEHLSVLRSLMPCFYVK+GDQASIIGGVV+YIKELQQVL+SLEAKKQ
Sbjct: 121 SHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKKQ 180

Query: 181 RKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQPPT 240
           RKVYSEVLSPRVV SSPRP P+SPRKPP LSPR++LPISPRTPQPTSPY KP RLQQ   
Sbjct: 181 RKVYSEVLSPRVV-SSPRPPPISPRKPP-LSPRISLPISPRTPQPTSPY-KPVRLQQ--- 240

Query: 241 TDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVLKT 300
             ++     + EPSP +S+S+        N+  N+L+ NSKS IA+VEVK++ PNVVLKT
Sbjct: 241 GYLSPTIAPSLEPSPSSSTSS--------NDNANELIVNSKSAIADVEVKYSCPNVVLKT 300

Query: 301 VSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQQ 334
            S+ IPGQAVKII+ALE LSLEILHV I+++D+TM NSFTIK GIECQLSAEELAHQ+QQ
Sbjct: 301 KSSRIPGQAVKIISALEDLSLEILHVSISSIDETMLNSFTIKFGIECQLSAEELAHQVQQ 338

[Close]
BLAST of CmaCh16G000720 vs. TAIR10
Match: AT5G53210.1 (AT5G53210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 310.8 bits (795), Expect = 9.9e-85
Identity = 211/372 (56.72%), Postives = 254/372 (68.28%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFS---------------- 60
           M + + DF ++ E FVD +       G DLF+I ++LE   E S                
Sbjct: 1   MQEIIPDFLEECE-FVDTSL-----AGDDLFAILESLEGAGEISPTAASTPKDGTTSSKE 60

Query: 61  MIEDDTELETSPKTK--RLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQ 120
           +++D     +SPK K  RL+               + ED   DG Q+MSH+TVERNRRKQ
Sbjct: 61  LVKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQ 120

Query: 121 MNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRV 180
           MNEHL+VLRSLMPCFYVK+GDQASIIGGVVEYI ELQQVLQSLEAKKQRK Y+EVLSPR 
Sbjct: 121 MNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPR- 180

Query: 181 VVSSPRPFP--MSPRKPPPLSPRLN----------LPISPRTPQPTSPY-SKPPRL---Q 240
           VV SPRP P  +SPRK PPLSPR+N           PISPRTPQPTSPY + PP+L    
Sbjct: 181 VVPSPRPSPPVLSPRK-PPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIP 240

Query: 241 QPPTTDMAN--NNNSTGEP---SPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKF 300
           QPP    ++  + +S G+P   SP +SSS+ + S ++ ++  N+LVANSKS +A+VEVKF
Sbjct: 241 QPPLRSYSSLASCSSLGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKF 300

Query: 301 TGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSA 334
           +G NV+LKTVS  IPGQ +KIIAALE L+LEIL V I TVD+TM NSFTIKIGIECQLSA
Sbjct: 301 SGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKIGIECQLSA 360

[Close]
BLAST of CmaCh16G000720 vs. TAIR10
Match: AT3G06120.1 (AT3G06120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 5.7e-32
Identity = 97/251 (38.65%), Postives = 136/251 (54.18%), Query Frame = 1 

Query: 90  MSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKK 149
           MSHI VERNRR+QMNEHL  LRSL PCFY+K+GDQASIIGGV+E+IKELQQ++Q LE+KK
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 150 QRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTS--------PYSK 209
           +RK  +                           R + P   +T +P+S        P+S 
Sbjct: 61  RRKTLN---------------------------RPSFPYDHQTIEPSSLGAATTRVPFS- 120

Query: 210 PPRLQQPPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKF 269
             R++   TT       +      CNS      +  +G+                     
Sbjct: 121 --RIENVMTTSTFKEVGAC-----CNSPHANVEAKISGS--------------------- 180

Query: 270 TGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSA 329
              NVVL+ VS  I GQ VKII+ LE+LS ++LH+ I+++++T+   F +KIG+EC LS 
Sbjct: 181 ---NVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLSL 192

Query: 330 EELAHQIQQTF 333
           EEL  ++Q++F
Sbjct: 241 EELTLEVQKSF 192

[Close]
BLAST of CmaCh16G000720 vs. TAIR10
Match: AT3G24140.1 (AT3G24140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-20
Identity = 58/112 (51.79%), Postives = 78/112 (69.64%), Query Frame = 1 

Query: 47  EDDTELE--TSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMN 106
           E+D E +  T  + K  +  A TS T        SE+     +QRM+HI VERNRRKQMN
Sbjct: 163 EEDRENKNVTKKEVKSKRKRARTSKT--------SEEVE---SQRMTHIAVERNRRKQMN 222

Query: 107 EHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSE 157
           EHL VLRSLMP  YV++GDQASIIGG +E+++EL+Q+LQ LE++K+R++  E
Sbjct: 223 EHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGE 263

[Close]
BLAST of CmaCh16G000720 vs. TAIR10
Match: AT5G46690.1 (AT5G46690.1 beta HLH protein 71)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-20
Identity = 79/234 (33.76%), Postives = 119/234 (50.85%), Query Frame = 1 

Query: 88  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 147
           QRM+HI VERNRR+QMN+HLSVLRSLMP  +  KGDQASI+GG +++IKEL+  L SLEA
Sbjct: 86  QRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEA 145

Query: 148 KKQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQ 207
           +K                               + +LN  ++  T Q ++   + P   Q
Sbjct: 146 QKHH-----------------------------NAKLNQSVTSSTSQDSNGEQENP--HQ 205

Query: 208 PPTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVV 267
           P +  ++     + +PS  N + +T+S          DL        A + +        
Sbjct: 206 PSSLSLSQFFLHSYDPSQENRNGSTSSV----KTPMEDLEVTLIETHANIRILSRRRGFR 265

Query: 268 LKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSA 322
             T++   P Q  K++A+L+ LSL ILH+ +TT+D+    S + K+   CQLS+
Sbjct: 266 WSTLATTKPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSS 284

[Close]
BLAST of CmaCh16G000720 vs. TAIR10
Match: AT1G22490.1 (AT1G22490.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.9e-19
Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 1 

Query: 88  QRMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEA 147
           QRM+HI VERNRRKQMNE+L+VLRSLMP  Y ++GDQASI+GG + Y+KEL+ +LQS+E 
Sbjct: 113 QRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEP 172

Query: 148 KKQR 152
           K+ R
Sbjct: 173 KRTR 176

[Close]
BLAST of CmaCh16G000720 vs. NCBI nr
Match: gi|659130846|ref|XP_008465382.1| (PREDICTED: transcription factor SPEECHLESS [Cucumis melo])

HSP 1 Score: 486.1 bits (1250), Expect = 4.9e-134
Identity = 295/381 (77.43%), Postives = 305/381 (80.05%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFSMIEDDTE--------- 60
           MVD  AD FQQN+EFVDHT NP  EG  DLFSIF++LENVAEF+MIEDDTE         
Sbjct: 1   MVDTFADLFQQNDEFVDHTLNPHFEGD-DLFSIFESLENVAEFTMIEDDTEPVKDGEETT 60

Query: 61  --------LETSPKTKRLKVTAATSPTTAMA--GVSSSEDANPDGAQRMSHITVERNRRK 120
                   LETSPKTKRLK  AATSPT AM   G+SSSED NPDG QRMSHITVERNRRK
Sbjct: 61  SLVFSETELETSPKTKRLKTIAATSPTAAMTSTGLSSSEDPNPDGPQRMSHITVERNRRK 120

Query: 121 QMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRK-VYSEVLSP 180
           QMNEHL+VLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRK VYSEVLSP
Sbjct: 121 QMNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVVYSEVLSP 180

Query: 181 RVVVSSPRP-FPMSPRKPPPLSPRLNLPISPRTPQPTSPYSK-PPRLQQPP--------- 240
           R VVSSPRP   MSPRK PPLSPRLNLPISPRTPQPTSPYSK PPRLQQ P         
Sbjct: 181 R-VVSSPRPNLAMSPRK-PPLSPRLNLPISPRTPQPTSPYSKPPPRLQQTPSAATGGGAY 240

Query: 241 ---------TTDMANNNNSTGEPSPCNSSSTTNSSIDNGN--------NGNNDLVANSKS 300
                    TT+MANNNNS  EPSPCNS STTNSSIDN N        N NNDLVANSKS
Sbjct: 241 NNISSSSSSTTNMANNNNSL-EPSPCNSCSTTNSSIDNNNNNNSNSNSNNNNDLVANSKS 300

Query: 301 GIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIK 334
            IAEVEVKFTGPNVVLKTVS PIPGQA KII+ALEQLSLEILHVKITT+D+TMFNSFTIK
Sbjct: 301 AIAEVEVKFTGPNVVLKTVSPPIPGQAFKIISALEQLSLEILHVKITTLDETMFNSFTIK 360

[Close]
BLAST of CmaCh16G000720 vs. NCBI nr
Match: gi|449463493|ref|XP_004149468.1| (PREDICTED: transcription factor SPEECHLESS [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 8.3e-134
Identity = 294/381 (77.17%), Postives = 305/381 (80.05%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEFSMIEDD----------- 60
           MVD  AD FQQN+EFVDHT NP  EG  DLFSIF++LENVAEF+MIEDD           
Sbjct: 1   MVDTFADLFQQNDEFVDHTLNPHFEGD-DLFSIFESLENVAEFTMIEDDIEPVKDGEETT 60

Query: 61  ------TELETSPKTKRLKVTAATSPTTAMA--GVSSSEDANPDGAQRMSHITVERNRRK 120
                 TELETSPKTKRLK  AATSPT AM   G+SSSED NPDG QRMSHITVERNRRK
Sbjct: 61  SLVFSETELETSPKTKRLKTIAATSPTAAMTSTGLSSSEDPNPDGPQRMSHITVERNRRK 120

Query: 121 QMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRK-VYSEVLSP 180
           QMNEHL+VLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRK VYSEVLSP
Sbjct: 121 QMNEHLTVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVVYSEVLSP 180

Query: 181 RVVVSSPRP-FPMSPRKPPPLSPRLNLPISPRTPQPTSPYSK-PPRLQQPP--------- 240
           R VVSSPRP   MSPRK PPLSPRLNLPISPRTPQPTSPYSK PPRLQQPP         
Sbjct: 181 R-VVSSPRPNLAMSPRK-PPLSPRLNLPISPRTPQPTSPYSKPPPRLQQPPSAATGGGAY 240

Query: 241 --------TTDMANNNNSTGEPSPCNSSSTTNSSIDNGN---------NGNNDLVANSKS 300
                   TT+MANNN+   EPSPCNS STTNSSIDN N         N NNDLVANSKS
Sbjct: 241 NIPSSSSSTTNMANNNSL--EPSPCNSCSTTNSSIDNNNNNNNSNSNSNNNNDLVANSKS 300

Query: 301 GIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIK 334
            IAEVEVKFTGPNVVLKTVS PIPGQA KII+ALEQLSLEILHVKITT+D+TMFNSFTIK
Sbjct: 301 AIAEVEVKFTGPNVVLKTVSPPIPGQAFKIISALEQLSLEILHVKITTLDETMFNSFTIK 360

[Close]
BLAST of CmaCh16G000720 vs. NCBI nr
Match: gi|255545056|ref|XP_002513589.1| (PREDICTED: transcription factor SPEECHLESS [Ricinus communis])

HSP 1 Score: 367.5 bits (942), Expect = 2.5e-98
Identity = 230/365 (63.01%), Postives = 268/365 (73.42%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEF----------------- 60
           M D+++DFF+++E F D+T +     G DLF+IF+TL++V +F                 
Sbjct: 1   MSDSVSDFFEEHE-FGDNTLD-----GEDLFAIFETLDSVTQFPPVTPSNEVVVISKDGG 60

Query: 61  ---------------SMIEDDTELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQ 120
                          +++E +TELETSPK KR K            G++SSE+ NPDG Q
Sbjct: 61  EETTRLVSQKSTSSSAILESETELETSPKNKRQK-----------TGIASSEEINPDGQQ 120

Query: 121 RMSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAK 180
           RMSHITVERNRRKQMNEHLSVLRSLMPCFYVK+GDQASIIGGVV YI ELQQVLQ+LEAK
Sbjct: 121 RMSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVNYINELQQVLQALEAK 180

Query: 181 KQRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQP 240
           KQRKVYSEVLSPR + SSPRP P+SPRK PPLSPRLNLPISPRTPQP SPY   PRLQQ 
Sbjct: 181 KQRKVYSEVLSPR-IASSPRPSPLSPRK-PPLSPRLNLPISPRTPQPGSPYR--PRLQQQ 240

Query: 241 PTTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVL 300
               ++    S+ EPSP  SSS   SSI   N+  N+LVANSKS IA+VEVKF+GPN++L
Sbjct: 241 GY--LSPTVASSLEPSPTTSSS---SSI---NDNINELVANSKSAIADVEVKFSGPNLLL 300

Query: 301 KTVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQI 334
           KTVS  IPGQA KII+ALE+LSLEILHV ++TVD+TM NSFTIKIGIECQLSAEELA QI
Sbjct: 301 KTVSPRIPGQATKIISALEELSLEILHVNVSTVDETMLNSFTIKIGIECQLSAEELAQQI 336

[Close]
BLAST of CmaCh16G000720 vs. NCBI nr
Match: gi|802767332|ref|XP_012090117.1| (PREDICTED: transcription factor SPEECHLESS [Jatropha curcas])

HSP 1 Score: 364.0 bits (933), Expect = 2.8e-97
Identity = 229/364 (62.91%), Postives = 261/364 (71.70%), Query Frame = 1 

Query: 1   MVDNLADFFQQNEEFVDHTTNPQLEGGYDLFSIFDTLENVAEF----------------- 60
           M D+L+DF  ++E F D T +     G DLF+IF++L++VAEF                 
Sbjct: 1   MSDSLSDFLDEHE-FGDTTLD-----GDDLFAIFESLDSVAEFPPVTPSDEVAVSSKEND 60

Query: 61  --------------SMIEDDTELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQR 120
                         +++E +TE ETSPK KR K TA           SS E  N DG QR
Sbjct: 61  ETTRLVSQKSTSSSALVESETEQETSPKNKRQKTTA-----------SSEEAINTDGQQR 120

Query: 121 MSHITVERNRRKQMNEHLSVLRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKK 180
            SHITVERNRRKQMNEHLSVLRSLMPCFYVK+GDQASIIGGVV+YI ELQQ+LQSLEAKK
Sbjct: 121 KSHITVERNRRKQMNEHLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQILQSLEAKK 180

Query: 181 QRKVYSEVLSPRVVVSSPRPFPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQPP 240
           QRKVYSEVLSPR +VSSPRP P+SPRK PPLSPRLNLPISPRTPQP SPY   PRLQQ  
Sbjct: 181 QRKVYSEVLSPR-IVSSPRPSPLSPRK-PPLSPRLNLPISPRTPQPGSPYR--PRLQQAA 240

Query: 241 TTDMANNNNSTGEPSPCNSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVLK 300
                   +++ EPSP +SSS+ N +I       N+LVANSKS IA+VEVKF+GPNV+LK
Sbjct: 241 GYLSPTMASASLEPSPTSSSSSINDNI-------NELVANSKSAIADVEVKFSGPNVLLK 300

Query: 301 TVSAPIPGQAVKIIAALEQLSLEILHVKITTVDDTMFNSFTIKIGIECQLSAEELAHQIQ 334
           TVS  IPGQAVKII+ALE LSLEILH  I+TVD+TM NSFTIKIGIECQLSAEELA QIQ
Sbjct: 301 TVSPKIPGQAVKIISALEHLSLEILHFDISTVDETMLNSFTIKIGIECQLSAEELAQQIQ 336

[Close]
BLAST of CmaCh16G000720 vs. NCBI nr
Match: gi|224118162|ref|XP_002317746.1| (hypothetical protein POPTR_0012s01370g [Populus trichocarpa])

HSP 1 Score: 357.5 bits (916), Expect = 2.6e-95
Identity = 228/348 (65.52%), Postives = 265/348 (76.15%), Query Frame = 1 

Query: 1   MVDNLADFFQQNE-EFVDHTTNPQLEGGYDLFSIFDTLENVAEF----------SMIEDD 60
           M ++L+DF ++ + EF D   +       DLF+IF++L++V +F             E +
Sbjct: 1   MTESLSDFLEEVQPEFGDTAFDAD-----DLFAIFESLDSVTDFPPSSSSNALHDFDETN 60

Query: 61  TELETSPKTKRLKVTAATSPTTAMAGVSSSEDANPDGAQRMSHITVERNRRKQMNEHLSV 120
            ELETSPK+KR K++A     +A A  SS ++ NPDG QRMSHITVERNRRKQMNEHLSV
Sbjct: 61  NELETSPKSKRQKISA-----SAAATASSDQEVNPDGQQRMSHITVERNRRKQMNEHLSV 120

Query: 121 LRSLMPCFYVKKGDQASIIGGVVEYIKELQQVLQSLEAKKQRKVYSEVLSPRVVVSSPRP 180
           LRSLMPCFYVK+GDQASIIGGVV+YI ELQQVLQSLEAKK+RKVYSEVLSPR +VSSPRP
Sbjct: 121 LRSLMPCFYVKRGDQASIIGGVVDYINELQQVLQSLEAKKKRKVYSEVLSPR-IVSSPRP 180

Query: 181 FPMSPRKPPPLSPRLNLPISPRTPQPTSPYSKPPRLQQ---PPTTDMANNNNSTGEPSPC 240
            P+SPRK PPLSPRLNLPISPRTPQP SPY KP  LQQ    PT  MAN+  S+  PSP 
Sbjct: 181 SPLSPRK-PPLSPRLNLPISPRTPQPCSPY-KPRILQQGYLSPT--MANSLESS--PSPS 240

Query: 241 NSSSTTNSSIDNGNNGNNDLVANSKSGIAEVEVKFTGPNVVLKTVSAPIPGQAVKIIAAL 300
           +SSS         N+  N+LVANSKS IA+VEVKF+GPNV+LKTVS  IPGQAVKII+AL
Sbjct: 241 SSSSI--------NDNINELVANSKSAIADVEVKFSGPNVLLKTVSPQIPGQAVKIISAL 300

Query: 301 EQLSLEILHVKITTVD-DTMFNSFTIKIGIECQLSAEELAHQIQQTFC 334
           E L+LEILHV I+ VD +TM NSFTIKIGIECQLSAEELA QIQ TFC
Sbjct: 301 EDLALEILHVSISIVDHETMLNSFTIKIGIECQLSAEELAQQIQLTFC 323

The following BLAST results are available for this feature:
BLAST of CmaCh16G000720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SPCH_ARATH1.8e-8356.72Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH PE=1 SV=1[more]
MUTE_ARATH1.0e-3038.65Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1[more]
FAMA_ARATH3.1e-1951.79Transcription factor FAMA OS=Arabidopsis thaliana GN=FAMA PE=1 SV=1[more]
BH071_ARATH6.8e-1933.76Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1 SV=1[more]
BH094_ARATH3.4e-1867.19Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2[more]
BLAST of CmaCh16G000720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7S9_CUCSA5.8e-13477.17Uncharacterized protein OS=Cucumis sativus GN=Csa_3G354520 PE=4 SV=1[more]
B9RIM0_RICCO1.8e-9863.01DNA binding protein, putative OS=Ricinus communis GN=RCOM_1580560 PE=4 SV=1[more]
B9I539_POPTR1.8e-9565.52Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s01370g PE=4 SV=1[more]
E0CUJ9_VITVI6.9e-9561.71Speechless OS=Vitis vinifera GN=SPCH PE=2 SV=1[more]
A0A0N7B3L9_VITRI1.5e-9461.43Speechless OS=Vitis riparia GN=SPCH PE=2 SV=1[more]
BLAST of CmaCh16G000720 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53210.19.9e-8556.72 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G06120.15.7e-3238.65 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G24140.11.7e-2051.79 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G46690.13.8e-2033.76 beta HLH protein 71[more]
AT1G22490.11.9e-1967.19 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CmaCh16G000720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659130846|ref|XP_008465382.1|4.9e-13477.43PREDICTED: transcription factor SPEECHLESS [Cucumis melo][more]
gi|449463493|ref|XP_004149468.1|8.3e-13477.17PREDICTED: transcription factor SPEECHLESS [Cucumis sativus][more]
gi|255545056|ref|XP_002513589.1|2.5e-9863.01PREDICTED: transcription factor SPEECHLESS [Ricinus communis][more]
gi|802767332|ref|XP_012090117.1|2.8e-9762.91PREDICTED: transcription factor SPEECHLESS [Jatropha curcas][more]
gi|224118162|ref|XP_002317746.1|2.6e-9565.52hypothetical protein POPTR_0012s01370g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G000720.1CmaCh16G000720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 88..150
score: 1.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 88..139
score: 3.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 93..144
score: 5.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 87..138
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 86..157
score: 2.09
NoneNo IPR availableunknownCoilCoilcoord: 131..151
scor
NoneNo IPR availablePANTHERPTHR11514MYCcoord: 29..333
score: 1.2E
NoneNo IPR availablePANTHERPTHR11514:SF58TRANSCRIPTION FACTOR SPEECHLESScoord: 29..333
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G000720Cucsa.012930Cucumber (Gy14) v1cgycmaB0549
CmaCh16G000720Cla004232Watermelon (97103) v1cmawmB316
CmaCh16G000720Csa3G354520Cucumber (Chinese Long) v2cmacuB322
CmaCh16G000720MELO3C026933Melon (DHL92) v3.5.1cmameB295
CmaCh16G000720CSPI03G22000Wild cucumber (PI 183967)cmacpiB328
CmaCh16G000720CmoCh18G013280Cucurbita moschata (Rifu)cmacmoB327
CmaCh16G000720Lsi05G000780Bottle gourd (USVL1VR-Ls)cmalsiB318
CmaCh16G000720Cp4.1LG14g06550Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G000720Cp4.1LG09g00440Cucurbita pepo (Zucchini)cmacpeB339
CmaCh16G000720MELO3C026933.2Melon (DHL92) v3.6.1cmamedB339
CmaCh16G000720CsaV3_3G021970Cucumber (Chinese Long) v3cmacucB0384
CmaCh16G000720Cla97C05G090920Watermelon (97103) v2cmawmbB346
CmaCh16G000720Bhi01G001078Wax gourdcmawgoB0439
CmaCh16G000720CsGy3G021290Cucumber (Gy14) v2cgybcmaB343
CmaCh16G000720Carg15082Silver-seed gourdcarcmaB1366
CmaCh16G000720Carg20355Silver-seed gourdcarcmaB0752
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh16G000720CmaCh18G012990Cucurbita maxima (Rimu)cmacmaB338
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G000720Cucurbita maxima (Rimu)cmacmaB243
CmaCh16G000720Cucurbita maxima (Rimu)cmacmaB300
CmaCh16G000720Cucurbita maxima (Rimu)cmacmaB346
CmaCh16G000720Cucumber (Gy14) v1cgycmaB0600
CmaCh16G000720Cucurbita moschata (Rifu)cmacmoB319
CmaCh16G000720Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G000720Cucurbita moschata (Rifu)cmacmoB333
CmaCh16G000720Wild cucumber (PI 183967)cmacpiB346
CmaCh16G000720Cucumber (Chinese Long) v2cmacuB342
CmaCh16G000720Melon (DHL92) v3.5.1cmameB283
CmaCh16G000720Melon (DHL92) v3.5.1cmameB296
CmaCh16G000720Watermelon (Charleston Gray)cmawcgB289
CmaCh16G000720Watermelon (Charleston Gray)cmawcgB295
CmaCh16G000720Watermelon (Charleston Gray)cmawcgB296
CmaCh16G000720Watermelon (97103) v1cmawmB318
CmaCh16G000720Cucurbita pepo (Zucchini)cmacpeB343
CmaCh16G000720Cucurbita pepo (Zucchini)cmacpeB358
CmaCh16G000720Bottle gourd (USVL1VR-Ls)cmalsiB298
CmaCh16G000720Bottle gourd (USVL1VR-Ls)cmalsiB320
CmaCh16G000720Cucumber (Gy14) v2cgybcmaB336
CmaCh16G000720Cucumber (Gy14) v2cgybcmaB618
CmaCh16G000720Melon (DHL92) v3.6.1cmamedB326
CmaCh16G000720Melon (DHL92) v3.6.1cmamedB332
CmaCh16G000720Melon (DHL92) v3.6.1cmamedB338
CmaCh16G000720Melon (DHL92) v3.6.1cmamedB344
CmaCh16G000720Silver-seed gourdcarcmaB0713
CmaCh16G000720Cucumber (Chinese Long) v3cmacucB0398
CmaCh16G000720Cucumber (Chinese Long) v3cmacucB0376
CmaCh16G000720Cucumber (Chinese Long) v3cmacucB0402
CmaCh16G000720Watermelon (97103) v2cmawmbB324
CmaCh16G000720Watermelon (97103) v2cmawmbB344
CmaCh16G000720Wax gourdcmawgoB0428