CmaCh15G011600 (gene) Cucurbita maxima (Rimu)

NameCmaCh15G011600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransposon Ty1-BL Gag-Pol polyprotein
LocationCma_Chr15 : 7353344 .. 7357313 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAACCATCACGACGTGGATCGAGAGTGTGGAGTTCCAATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGCGAGGCGAAGTTAGCGATTTGTTGGTCATGCAAGACCTCGATGTCTCTCTCCAAGAGGAAATGCCTGAAGACATGACAGAAGCAGAATGGACGAAATTAAATCGGCAAGCCTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGGTTACCATGGCGAAAGAATTATGGGACAAGCTTGAAGCGAAATATATGAAGAAGAGTGTGGAAAATAAACTCTATTTGAAGAAGAAACTCTTCCGTTTTGATTACAAGGAAGGCATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTAATTTGCTCAATCTTGATGTTAAGATTGATGACGAGGACAAGGCGTTGTTGTTATTAAACTCCTTGCCGGAATCCTACGAGTTTTTAGTAACGACCCTACTACATGGAATCACTAATATTGATTTTGAAGATGTTTCAAATGCCTTAATAAACAATGAGATGCGAAAGAAGGAAAAGGAGACGTATCAAAGCTCTAGCTCAAATGTTCTCACTGCTCATGGAAGGACTTCCAATTGGAAAAAGAACGAATGTGGAGAGTCTCGATTAAAGTCGAGAGGTAGATCTGATAATTGGAGAAAACTTGGTAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAAAAAGATTGTTCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATGATGCCTTGACAATCTCTCTATCAGTCAGCCAAACCAGTGAATGGATTCTTGATTCTGGGTGCTCCTATCATATGTGTCCCAACAAAGAGATGTTTTTGGACTTCAAGGAGTTCAATGGTGGAGTTGTCTATATGGGAAATGATAGTACTTGTAAGATAATGGGAATCGGCTCAGTACAAATCAAGATGTTTGATGGGGTTATACGAAAACTCAAAGATGTGAGGTATGTCTCTGACTTGAAGAAAAATTTGATTTCACTTGGCGTTTTGGATGCGAGTGGTTATCGCATCATTTTGGAAGGAGGGAATTTGAAAGTAGCTCGTGGAGCTTTGGTGGCAATTACAGGAACTAGAAGAGGTAGCATATACTACCTCAACGGAACCACAATAATTGGGCATGCTGCTGTGGCAAGTTCGAAAGAACAAGACATATCGAAATTATGGCACATGCGACTCGGGCAAGCTGGTGAGAAGGAGACACTGGTGAACCAAGGAGTCCTTAAGGGTGCCACAACTGGAAGAATTGATTTCTGTGAACATTGTATATTTGGCAAACAAAAAAATGTGAAGTTTGGTACAGCTATACACCAAACAAAGGGCATTTTGGATTATGTTCACACTGATGTATGGGGTCCCACAAAGAATGTCTCATTGGGAGGAAAGAGGTGGTTCGTCACCTTTATTGATGACTACTCGAAGGGAGTTTGGATGTATCCCATGAGGCACAAAAACGAGGTTCTCCAAATCTTCCTAGAGTGGAAGAAAATGGTAGAGAATCAGACGGACAAGAAAATCAAAAGGCTGAGATCAGACAACGGGGGAGAATATACTTATGATCCATTCCTTAAAGTATGCCGAGATGAAGGGATCGTTCGACACTTCACTGTTCCTGGTAAGCCACAACAAAATGGAGTTGCTGAGAGAATGAACCAGACATTAATAGAGAAGGTTCGATGCATATTGTCTCAAGCAGGATTGAGTAAGGCATTTTGGGCTGAGGCTCTCAGTTATGCAGTTCACTTGGTGAATCGTTTACCTGTTTCTGGAAACGGTGGGAGAACTCCGCTTGAGGTATGGTCAGGTAGTCCTGTTAGTGATTATGATAAATTACATGTGTTTGGGTGTCCTGCTTATTATCATGTGACAGACTCAAAGCTGGATCCTAGAGCAAAAAAAGCCAAGTTTATGGGTTTTAGCAAAGGTGTGAAGGGCTATAGGTTATGGTGTCCAAAAACAAGTAAGATTGTTAATAGTCGAGATGTGACATTCGATGAGTCTGAAATGTTTTTGCAGAAAATTGAAAATAATGACGAGGCATTGAAGCAGGTGGAGAAGGTGGTGTTCTCTCCTGATGTGGTTGCTCCTACTGAAGAACCTATTGACCAGGTAAATAATAACTTTGATGTTTTAGAACAGAAAGAGCAAAGTCTTGAGGAGCAAAGCCTTGTAAATGAAAGAGTGGAGGAACCTGAGTCAATCGCCAAGAATAGACCACGAAGGGTAATTCGAAAACCTGCAAGGTTTGATGATACGATAGCATATGCTTTCTCTTTGATTGATGGAGTTCCTAACAGTTACAAAGATGCTATTCAGAGCCCGGATAGCTTACACTGGCAAGAGGCTGTGAATCAGGAGATAGCATCATTGGAGATAAATCAAACTTGGGATTTGGTACAACTTCCAAAAGGTAAGAAGGAAATTGGTTGTAAATGGGTTTTTGCAAAAAAGGAAGACCCTTTTGGTATACGTTATAAGGCTCGACTTGTGGCTAAAGGCTACACACAAAAGGAAGGTATTGATTACAATGAAATTTTCTCACCTGTGGTAAAACATTCTTCGATTCGAATTTTGTTGGCTTTGGTTGCTCAATTTAATCTTGAGCTTGCACAACTCGATGTAAAAACTGCTTTTTTGCATGGAGATTTGGAAGAAGAAATATATATGACGCAACCAGTTGGTTTCCGAGTAGTTGGACAGCAACATTTAGTATGCAGATTGAAGAAATCTTTGTATGGGCTGAAGCAATCCCCTCGCCAATGGTATAAAAGGTTTGATCATTTCATGGTAGAGCATATGTATACTCATAGTCAATTTGACCTTGTGTGTATTATCGATGTCTCGATGATGGATCGTTTATCTACTTGCTCTTATATGTTGATGATATGTTAATTGCTTCAAAGAGACAGGTGGAGATTGATAAACTCAAAGATGAGCTTTCTAAAACATTTGAAATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTACAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAGATTTAGTTTGAATAATTCAACCAAACCTGTTAGTACTCCACTTGCTCCTCATTTCAAGCTTAGTGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGATATATGGAGAACATTCCTTATACAAATGCTGTTGGTGCGTTGATGTATGCTATGGTGTGTACTCGACCTGATCTTTCACACGCAGTAAGCATGGTGAGTCGTTATATGCATAATCCTGGTAAAGAGCATTGGCAGGCTGTAAAATGGATTCTTAGGTACATTCTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGGTTTTGTGGATTCTGATTATGCTGGTGACTTGGATAAGCGACGATCTACCACGGGTTATTTATTTACTATGGCTGGTGGACCTGTTTGTTGGCGCTCAACATTGCAGTCTACTGTTGCATTGTCTACCACTGAAGCAGAGTATATGGCGGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGTATTTCGCAGGGACATATAGATGTATTTTGTGATAGCCAGAGCGCTATTTGCTTGTCAAAAAATCAAGTCCATCATGCTCGTACAAAACACATTGATGTCCGTTTTCACTTTATTCGAGAAATCATTAGCAAAGGGGATATTCGTTTACTAAAAATTGGAACTGCTGATAACCCTGCTGATATGTTGACAAAGGTGGTCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGGAAGGAAGGAGTAG

mRNA sequence

ATGGCAGAACCATCACGACGTGGATCGAGAGTGTGGAGTTCCAATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGCGAGGCGAAGTTAGCGATTTGTTGGTCATGCAAGACCTCGATGTCTCTCTCCAAGAGGAAATGCCTGAAGACATGACAGAAGCAGAATGGACGAAATTAAATCGGCAAGCCTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGGTTACCATGGCGAAAGAATTATGGGACAAGCTTGAAGCGAAATATATGAAGAAGAGTGTGGAAAATAAACTCTATTTGAAGAAGAAACTCTTCCGTTTTGATTACAAGGAAGGCATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTAATTTGCTCAATCTTGATGTTAAGATTGATGACGAGGACAAGGCGTTGTTGTTATTAAACTCCTTGCCGGAATCCTACGAGTTTTTAGTAACGACCCTACTACATGGAATCACTAATATTGATTTTGAAGATGTTTCAAATGCCTTAATAAACAATGAGATGCGAAAGAAGGAAAAGGAGACGTATCAAAGCTCTAGCTCAAATGTTCTCACTGCTCATGGAAGGACTTCCAATTGGAAAAAGAACGAATGTGGAGAGTCTCGATTAAAGTCGAGAGGTAGATCTGATAATTGGAGAAAACTTGGTAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAAAAAGATTGTTCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATGATGCCTTGACAATCTCTCTATCAGTCAGCCAAACCAGTGAATGGATTCTTGATTCTGGGTGCTCCTATCATATGTGTCCCAACAAAGAGATGTTTTTGGACTTCAAGGAGTTCAATGGTGGAGTTGTCTATATGGGAAATGATAGTACTTGTAAGATAATGGGAATCGGCTCAGTACAAATCAAGATGTTTGATGGGGTTATACGAAAACTCAAAGATGTGAGGTATGTCTCTGACTTGAAGAAAAATTTGATTTCACTTGGCGTTTTGGATGCGAGTGGTTATCGCATCATTTTGGAAGGAGGGAATTTGAAAGTAGCTCGTGGAGCTTTGGTGGCAATTACAGGAACTAGAAGAGGTAGCATATACTACCTCAACGGAACCACAATAATTGGGCATGCTGCTGTGGCAAGTTCGAAAGAACAAGACATATCGAAATTATGGCACATGCGACTCGGGCAAGCTGGTGAGAAGGAGACACTGGTGAACCAAGGAGTCCTTAAGGGTGCCACAACTGGAAGAATTGATTTCTGTGAACATTGTATATTTGGCAAACAAAAAAATGTGAAGTTTGGTACAGCTATACACCAAACAAAGGGCATTTTGGATTATGTTCACACTGATGTATGGGGTCCCACAAAGAATGTCTCATTGGGAGGAAAGAGGTGGTTCGTCACCTTTATTGATGACTACTCGAAGGGAGTTTGGATGTATCCCATGAGGCACAAAAACGAGGTTCTCCAAATCTTCCTAGAGTGGAAGAAAATGGTAGAGAATCAGACGGACAAGAAAATCAAAAGGCTGAGATCAGACAACGGGGGAGAATATACTTATGATCCATTCCTTAAAGTATGCCGAGATGAAGGGATCGTTCGACACTTCACTGTTCCTGGTAAGCCACAACAAAATGGAGTTGCTGAGAGAATGAACCAGACATTAATAGAGAAGGTTCGATGCATATTGTCTCAAGCAGGATTGAGTAAGGCATTTTGGGCTGAGGCTCTCAGTTATGCAGTTCACTTGGTGAATCGTTTACCTGTTTCTGGAAACGGTGGGAGAACTCCGCTTGAGGTATGGTCAGGTAGTCCTGTTAGTGATTATGATAAATTACATGTGTTTGGGTGTCCTGCTTATTATCATGTGACAGACTCAAAGCTGGATCCTAGAGCAAAAAAAGCCAAGTTTATGGGTTTTAGCAAAGGTGTGAAGGGCTATAGGTTATGGTGTCCAAAAACAAGTAAGATTGTTAATAGTCGAGATGTGACATTCGATGAGTCTGAAATGTTTTTGCAGAAAATTGAAAATAATGACGAGGCATTGAAGCAGGTGGAGAAGGTGGTGTTCTCTCCTGATGTGGTTGCTCCTACTGAAGAACCTATTGACCAGGTAAATAATAACTTTGATGTTTTAGAACAGAAAGAGCAAAGTCTTGAGGAGCAAAGCCTTGTAAATGAAAGAGTGGAGGAACCTGAGTCAATCGCCAAGAATAGACCACGAAGGGTAATTCGAAAACCTGCAAGGTTTGATGATACGATAGCATATGCTTTCTCTTTGATTGATGGAGTTCCTAACAGTTACAAAGATGCTATTCAGAGCCCGGATAGCTTACACTGGCAAGAGGCTGTGAATCAGGAGATAGCATCATTGGAGATAAATCAAACTTGGGATTTGGTACAACTTCCAAAAGGTAAGAAGGAAATTGGTTGTAAATGGGTTTTTGCAAAAAAGGAAGACCCTTTTGGTATACGTTATAAGGCTCGACTTGTGGCTAAAGGCTACACACAAAAGGAAGGTATTGATTACAATGAAATTTTCTCACCTGTGGTAAAACATTCTTCGATTCGAATTTTGTTGGCTTTGGTTGCTCAATTTAATCTTGAGCTTGCACAACTCGATGTAAAAACTGCTTTTTTGCATGGAGATTTGGAAGAAGAAATATATATGACGCAACCAGTTGGTTTCCGAGTAGTTGGACAGCAACATTTAGTGGAGATTGATAAACTCAAAGATGAGCTTTCTAAAACATTTGAAATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTACAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAGATTTAGTTTGAATAATTCAACCAAACCTGTTAGTACTCCACTTGCTCCTCATTTCAAGCTTAGTGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGATATATGGAGAACATTCCTTATACAAATGCTGTTGGTGCGTTGATGTATGCTATGGTGTGTACTCGACCTGATCTTTCACACGCAGTACATTCTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGGTTTTGTGGATTCTGATTATGCTGGTGACTTGGATAAGCGACGATCTACCACGGGTTATTTATTTACTATGGCTGGTGGACCTGTTTGTTGGCGCTCAACATTGCAGTCTACTGTTGCATTGTCTACCACTGAAGCAGAGTATATGGCGGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGTATTTCGCAGGGACATATAGATGTATTTTGTGATAGCCAGAGCGCTATTTGCTTGTCAAAAAATCAAGTCCATCATGCTCGTACAAAACACATTGATGTCCGTTTTCACTTTATTCGAGAAATCATTAGCAAAGGGGATATTCGTTTACTAAAAATTGGAACTGCTGATAACCCTGCTGATATGTTGACAAAGGTGGTCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGGAAGGAAGGAGTAG

Coding sequence (CDS)

ATGGCAGAACCATCACGACGTGGATCGAGAGTGTGGAGTTCCAATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGCGAGGCGAAGTTAGCGATTTGTTGGTCATGCAAGACCTCGATGTCTCTCTCCAAGAGGAAATGCCTGAAGACATGACAGAAGCAGAATGGACGAAATTAAATCGGCAAGCCTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGGTTACCATGGCGAAAGAATTATGGGACAAGCTTGAAGCGAAATATATGAAGAAGAGTGTGGAAAATAAACTCTATTTGAAGAAGAAACTCTTCCGTTTTGATTACAAGGAAGGCATCTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTAATTTGCTCAATCTTGATGTTAAGATTGATGACGAGGACAAGGCGTTGTTGTTATTAAACTCCTTGCCGGAATCCTACGAGTTTTTAGTAACGACCCTACTACATGGAATCACTAATATTGATTTTGAAGATGTTTCAAATGCCTTAATAAACAATGAGATGCGAAAGAAGGAAAAGGAGACGTATCAAAGCTCTAGCTCAAATGTTCTCACTGCTCATGGAAGGACTTCCAATTGGAAAAAGAACGAATGTGGAGAGTCTCGATTAAAGTCGAGAGGTAGATCTGATAATTGGAGAAAACTTGGTAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAAAAAGATTGTTCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATGATGCCTTGACAATCTCTCTATCAGTCAGCCAAACCAGTGAATGGATTCTTGATTCTGGGTGCTCCTATCATATGTGTCCCAACAAAGAGATGTTTTTGGACTTCAAGGAGTTCAATGGTGGAGTTGTCTATATGGGAAATGATAGTACTTGTAAGATAATGGGAATCGGCTCAGTACAAATCAAGATGTTTGATGGGGTTATACGAAAACTCAAAGATGTGAGGTATGTCTCTGACTTGAAGAAAAATTTGATTTCACTTGGCGTTTTGGATGCGAGTGGTTATCGCATCATTTTGGAAGGAGGGAATTTGAAAGTAGCTCGTGGAGCTTTGGTGGCAATTACAGGAACTAGAAGAGGTAGCATATACTACCTCAACGGAACCACAATAATTGGGCATGCTGCTGTGGCAAGTTCGAAAGAACAAGACATATCGAAATTATGGCACATGCGACTCGGGCAAGCTGGTGAGAAGGAGACACTGGTGAACCAAGGAGTCCTTAAGGGTGCCACAACTGGAAGAATTGATTTCTGTGAACATTGTATATTTGGCAAACAAAAAAATGTGAAGTTTGGTACAGCTATACACCAAACAAAGGGCATTTTGGATTATGTTCACACTGATGTATGGGGTCCCACAAAGAATGTCTCATTGGGAGGAAAGAGGTGGTTCGTCACCTTTATTGATGACTACTCGAAGGGAGTTTGGATGTATCCCATGAGGCACAAAAACGAGGTTCTCCAAATCTTCCTAGAGTGGAAGAAAATGGTAGAGAATCAGACGGACAAGAAAATCAAAAGGCTGAGATCAGACAACGGGGGAGAATATACTTATGATCCATTCCTTAAAGTATGCCGAGATGAAGGGATCGTTCGACACTTCACTGTTCCTGGTAAGCCACAACAAAATGGAGTTGCTGAGAGAATGAACCAGACATTAATAGAGAAGGTTCGATGCATATTGTCTCAAGCAGGATTGAGTAAGGCATTTTGGGCTGAGGCTCTCAGTTATGCAGTTCACTTGGTGAATCGTTTACCTGTTTCTGGAAACGGTGGGAGAACTCCGCTTGAGGTATGGTCAGGTAGTCCTGTTAGTGATTATGATAAATTACATGTGTTTGGGTGTCCTGCTTATTATCATGTGACAGACTCAAAGCTGGATCCTAGAGCAAAAAAAGCCAAGTTTATGGGTTTTAGCAAAGGTGTGAAGGGCTATAGGTTATGGTGTCCAAAAACAAGTAAGATTGTTAATAGTCGAGATGTGACATTCGATGAGTCTGAAATGTTTTTGCAGAAAATTGAAAATAATGACGAGGCATTGAAGCAGGTGGAGAAGGTGGTGTTCTCTCCTGATGTGGTTGCTCCTACTGAAGAACCTATTGACCAGGTAAATAATAACTTTGATGTTTTAGAACAGAAAGAGCAAAGTCTTGAGGAGCAAAGCCTTGTAAATGAAAGAGTGGAGGAACCTGAGTCAATCGCCAAGAATAGACCACGAAGGGTAATTCGAAAACCTGCAAGGTTTGATGATACGATAGCATATGCTTTCTCTTTGATTGATGGAGTTCCTAACAGTTACAAAGATGCTATTCAGAGCCCGGATAGCTTACACTGGCAAGAGGCTGTGAATCAGGAGATAGCATCATTGGAGATAAATCAAACTTGGGATTTGGTACAACTTCCAAAAGGTAAGAAGGAAATTGGTTGTAAATGGGTTTTTGCAAAAAAGGAAGACCCTTTTGGTATACGTTATAAGGCTCGACTTGTGGCTAAAGGCTACACACAAAAGGAAGGTATTGATTACAATGAAATTTTCTCACCTGTGGTAAAACATTCTTCGATTCGAATTTTGTTGGCTTTGGTTGCTCAATTTAATCTTGAGCTTGCACAACTCGATGTAAAAACTGCTTTTTTGCATGGAGATTTGGAAGAAGAAATATATATGACGCAACCAGTTGGTTTCCGAGTAGTTGGACAGCAACATTTAGTGGAGATTGATAAACTCAAAGATGAGCTTTCTAAAACATTTGAAATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTACAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAGATTTAGTTTGAATAATTCAACCAAACCTGTTAGTACTCCACTTGCTCCTCATTTCAAGCTTAGTGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGATATATGGAGAACATTCCTTATACAAATGCTGTTGGTGCGTTGATGTATGCTATGGTGTGTACTCGACCTGATCTTTCACACGCAGTACATTCTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGGTTTTGTGGATTCTGATTATGCTGGTGACTTGGATAAGCGACGATCTACCACGGGTTATTTATTTACTATGGCTGGTGGACCTGTTTGTTGGCGCTCAACATTGCAGTCTACTGTTGCATTGTCTACCACTGAAGCAGAGTATATGGCGGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGTATTTCGCAGGGACATATAGATGTATTTTGTGATAGCCAGAGCGCTATTTGCTTGTCAAAAAATCAAGTCCATCATGCTCGTACAAAACACATTGATGTCCGTTTTCACTTTATTCGAGAAATCATTAGCAAAGGGGATATTCGTTTACTAAAAATTGGAACTGCTGATAACCCTGCTGATATGTTGACAAAGGTGGTCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGGAAGGAAGGAGTAG

Protein sequence

MAEPSRRGSRVWSSNLEVEKFDGTNNFGVWRGEVSDLLVMQDLDVSLQEEMPEDMTEAEWTKLNRQACGIIRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHLDDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALINNEMRKKEKETYQSSSSNVLTAHGRTSNWKKNECGESRLKSRGRSDNWRKLGKNECAYCRQKGHWKKDCSILKEKGSKSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMFLDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQDISKLWHMRLGQAGEKETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKMVENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCPAYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIENNDEALKQVEKVVFSPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNERVEEPESIAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFGIRYKARLVAKGYTQKEGIDYNEIFSPVVKHSSIRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVGQQHLVEIDKLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSRFSLNNSTKPVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSHAVHSGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTTGYLFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVFCDSQSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADNPADMLTKVVAREKFCHCLDLINVGRKE
BLAST of CmaCh15G011600 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.0e-184
Identity = 386/960 (40.21%), Postives = 553/960 (57.60%), Query Frame = 1

Query: 17  EVEKFDGTNNFGVWRGEVSDLLVMQDLD--VSLQEEMPEDMTEAEWTKLNRQACGIIRSC 76
           EV KF+G N F  W+  + DLL+ Q L   + +  + P+ M   +W  L+ +A   IR  
Sbjct: 7   EVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLH 66

Query: 77  LGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHLDDFN 136
           L  D     +    A+ +W +LE+ YM K++ NKLYLKK+L+     EG +   HL+ FN
Sbjct: 67  LSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 126

Query: 137 KIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALINNEMRK 196
            +IT L NL VKI++EDKA+LLLNSLP SY+ L TT+LHG T I+ +DV++AL+ NE  +
Sbjct: 127 GLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMR 186

Query: 197 KEKETYQSSSSNVLTAHGRTSNWKKNECGESRLKSRGRSDNWRKLGKNECAYCRQKGHWK 256
           K+ E    +    L   GR  +++++     R  +RG+S N  K     C  C Q GH+K
Sbjct: 187 KKPE----NQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFK 246

Query: 257 KDC-SILKEKGSKSNVVRDDDT----DTDDALTISLSVSQT--------SEWILDSGCSY 316
           +DC +  K KG  S    DD+T      +D + + ++  +         SEW++D+  S+
Sbjct: 247 RDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASH 306

Query: 317 HMCPNKEMFLDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKN 376
           H  P +++F  +   + G V MGN S  KI GIG + IK   G    LKDVR+V DL+ N
Sbjct: 307 HATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMN 366

Query: 377 LISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQD 436
           LIS   LD  GY         ++ +G+LV   G  RG++Y  N     G    A   + +
Sbjct: 367 LISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAA---QDE 426

Query: 437 IS-KLWHMRLGQAGEK--ETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKG 496
           IS  LWH R+G   EK  + L  + ++  A    +  C++C+FGKQ  V F T+  +   
Sbjct: 427 ISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLN 486

Query: 497 ILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKMVENQ 556
           ILD V++DV GP +  S+GG ++FVTFIDD S+ +W+Y ++ K++V Q+F ++  +VE +
Sbjct: 487 ILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERE 546

Query: 557 TDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEKVRCI 616
           T +K+KRLRSDNGGEYT   F + C   GI    TVPG PQ NGVAERMN+T++EKVR +
Sbjct: 547 TGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSM 606

Query: 617 LSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCPAYYH 676
           L  A L K+FW EA+  A +L+NR P        P  VW+   VS Y  L VFGC A+ H
Sbjct: 607 LRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVS-YSHLKVFGCRAFAH 666

Query: 677 VTD---SKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIENND 736
           V     +KLD ++    F+G+     GYRLW P   K++ SRDV F ESE     +    
Sbjct: 667 VPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE-----VRTAA 726

Query: 737 EALKQVEKVVFSPDVVAP--TEEPIDQVNNNFDVLEQKEQS---LEEQSLVNERVEEPE- 796
           +  ++V+  +    V  P  +  P    +   +V EQ EQ    +E+   ++E VEE E 
Sbjct: 727 DMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEH 786

Query: 797 ---SIAKNRPRRVIRKP---ARFDDTIAYAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQE 856
                 +++P R   +P   +R   +  Y     D  P S K+ +  P+     +A+ +E
Sbjct: 787 PTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEE 846

Query: 857 IASLEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFG--IRYKARLVAKGYTQKEGIDYNE 916
           + SL+ N T+ LV+LPKGK+ + CKWVF  K+D     +RYKARLV KG+ QK+GID++E
Sbjct: 847 MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDE 906

Query: 917 IFSPVVKHSSIRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVGQQHLV 942
           IFSPVVK +SIR +L+L A  +LE+ QLDVKTAFLHGDLEEEIYM QP GF V G++H+V
Sbjct: 907 IFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMV 953

BLAST of CmaCh15G011600 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 255.0 bits (650), Expect = 4.2e-66
Identity = 199/719 (27.68%), Postives = 340/719 (47.29%), Query Frame = 1

Query: 18  VEKFDGTNNFGVWRGEVSDLLVMQDLDVSLQEEMPEDMTEAEWTKLNRQACGIIRSCLGK 77
           ++ FDG   + +W+  +  LL  QD+   +   MP ++ ++ W K  R A   I   L  
Sbjct: 8   IKPFDG-EKYAIWKFRIRALLAEQDVLKVVDGLMPNEVDDS-WKKAERCAKSTIIEYLSD 67

Query: 78  DQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHLDDFNKII 137
                      A+++ + L+A Y +KS+ ++L L+K+L        +S+  H   F+++I
Sbjct: 68  SFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFDELI 127

Query: 138 TNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTL-LHGITNIDFEDVSNALINNEMRKKE 197
           + LL    KI++ DK   LL +LP  Y+ ++T +      N+    V N L++ E+  K 
Sbjct: 128 SELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLLDQEI--KI 187

Query: 198 KETYQSSSSNVLTAH-GRTSNWKKNECGESRLKSRGRSDNWRKLGKNECAYCRQKGHWKK 257
           K  +  +S  V+ A     +N  KN   ++R+    +        K +C +C ++GH KK
Sbjct: 188 KNDHNDTSKKVMNAIVHNNNNTYKNNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKK 247

Query: 258 DCSILKEKGSKSNVVRDDDTDTDDALTISLSVSQTSE--------WILDSGCSYHMCPNK 317
           DC   K   +  N   +    T  +  I+  V + +         ++LDSG S H+  ++
Sbjct: 248 DCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDE 307

Query: 318 EMFLDFKE----FNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLI 377
            ++ D  E        V   G        GI    +++ +     L+DV +  +   NL+
Sbjct: 308 SLYTDSVEVVPPLKIAVAKQGEFIYATKRGI----VRLRNDHEITLEDVLFCKEAAGNLM 367

Query: 378 SLGVLDASGYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVA-SSKEQDI 437
           S+  L  +G  I  +   + +++  L+ +  +       LN   +I   A + ++K ++ 
Sbjct: 368 SVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGM-----LNNVPVINFQAYSINAKHKNN 427

Query: 438 SKLWHMRLGQAGE--------KETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIH 497
            +LWH R G   +        K    +Q +L        + CE C+ GKQ  + F     
Sbjct: 428 FRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELS-CEICEPCLNGKQARLPFKQLKD 487

Query: 498 QT--KGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWK 557
           +T  K  L  VH+DV GP   V+L  K +FV F+D ++     Y +++K++V  +F ++ 
Sbjct: 488 KTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFV 547

Query: 558 KMVENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLI 617
              E   + K+  L  DNG EY  +   + C  +GI  H TVP  PQ NGV+ERM +T+ 
Sbjct: 548 AKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTIT 607

Query: 618 EKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSG--NGGRTPLEVWSGSPVSDYDK-LH 677
           EK R ++S A L K+FW EA+  A +L+NR+P     +  +TP E+W       Y K L 
Sbjct: 608 EKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNK--KPYLKHLR 667

Query: 678 VFGCPAYYHVTD--SKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEM 707
           VFG   Y H+ +   K D ++ K+ F+G+     G++LW     K + +RDV  DE+ M
Sbjct: 668 VFGATVYVHIKNKQGKFDDKSFKSIFVGYEP--NGFKLWDAVNEKFIVARDVVVDETNM 708

BLAST of CmaCh15G011600 vs. Swiss-Prot
Match: YO22B_YEAST (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-OR2 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.7e-25
Identity = 134/576 (23.26%), Postives = 239/576 (41.49%), Query Frame = 1

Query: 261 KEKGSKSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMFLDFKEFNGGV 320
           ++K SK     D + +  D L I    SQT   +  +   +H  PN E+           
Sbjct: 434 QQKESKPTRTIDSNDELPDHLLIDSGASQTL--VRSAHYLHHATPNSEIN---------- 493

Query: 321 VYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDASGYRIILEGG 380
           +         I  IG++     +G    +K + +  ++  +L+SL  L            
Sbjct: 494 IVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL-HTPNIAYDLLSLSELTNQNITACFTRN 553

Query: 381 NLKVARGALVAITGTRRGSIYYLNGTTII-GHAAVAS----SKEQDISK----LWHMRLG 440
            L+ + G ++A    + G  Y+L+   +I  H +  +    +K + ++K    L H  LG
Sbjct: 554 TLERSDGTVLAPI-VKHGDFYWLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLG 613

Query: 441 QAGEKETLVNQGVLKGATT----GRIDF-------CEHCIFGKQ---KNVKFGTAIHQTK 500
            A  +   + + + K A T      I++       C  C+ GK    ++VK     +Q  
Sbjct: 614 HANFRS--IQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQES 673

Query: 501 -GILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNE--VLQIFLEWKKM 560
                Y+HTD++GP  ++      +F++F D+ ++  W+YP+  + E  +L +F      
Sbjct: 674 YEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAF 733

Query: 561 VENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEK 620
           ++NQ + ++  ++ D G EYT     K   + GI   +T     + +GVAER+N+TL+  
Sbjct: 734 IKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLND 793

Query: 621 VRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCP 680
            R +L  +GL    W  A+ ++  + N L VS    ++  +  +G    D   +  FG P
Sbjct: 794 CRTLLHCSGLPNHLWFSAVEFSTIIRNSL-VSPKNDKSARQ-HAGLAGLDITTILPFGQP 853

Query: 681 AYY--HVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIE 740
                H  DSK+ PR      +  S+   GY ++ P   K V++ +            ++
Sbjct: 854 VIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVI---------LQ 913

Query: 741 NNDEALKQ--VEKVVFSPDV------------VAPTEEPIDQVNNNFDVLEQKEQSLEEQ 792
           NN   L Q   + + F  D+               TE+  DQ N   D   Q E  +   
Sbjct: 914 NNQTKLDQFDYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQ-NTESDHDYQSEIEINSD 973

BLAST of CmaCh15G011600 vs. Swiss-Prot
Match: YD22B_YEAST (Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-DR2 PE=3 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 6.2e-25
Identity = 134/576 (23.26%), Postives = 239/576 (41.49%), Query Frame = 1

Query: 261 KEKGSKSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMFLDFKEFNGGV 320
           ++K SK     D + +  D L I    SQT   +  +   +H  PN E+           
Sbjct: 434 QQKESKPTRTIDSNDELPDHLLIDSGASQTL--VRSAHYLHHATPNSEIN---------- 493

Query: 321 VYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDASGYRIILEGG 380
           +         I  IG++     +G    +K + +  ++  +L+SL  L            
Sbjct: 494 IVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL-HTPNIAYDLLSLSELANQNITACFTRN 553

Query: 381 NLKVARGALVAITGTRRGSIYYLNGTTII-GHAAVAS----SKEQDISK----LWHMRLG 440
            L+ + G ++A    + G  Y+L+   +I  H +  +    +K + ++K    L H  LG
Sbjct: 554 TLERSDGTVLAPI-VKHGDFYWLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLG 613

Query: 441 QAGEKETLVNQGVLKGATT----GRIDF-------CEHCIFGKQ---KNVKFGTAIHQTK 500
            A  +   + + + K A T      I++       C  C+ GK    ++VK     +Q  
Sbjct: 614 HANFRS--IQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQES 673

Query: 501 -GILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNE--VLQIFLEWKKM 560
                Y+HTD++GP  ++      +F++F D+ ++  W+YP+  + E  +L +F      
Sbjct: 674 YEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAF 733

Query: 561 VENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEK 620
           ++NQ + ++  ++ D G EYT     K   + GI   +T     + +GVAER+N+TL+  
Sbjct: 734 IKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLND 793

Query: 621 VRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCP 680
            R +L  +GL    W  A+ ++  + N L VS    ++  +  +G    D   +  FG P
Sbjct: 794 CRTLLHCSGLPNHLWFSAVEFSTIIRNSL-VSPKNDKSARQ-HAGLAGLDITTILPFGQP 853

Query: 681 AYY--HVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIE 740
                H  DSK+ PR      +  S+   GY ++ P   K V++ +            ++
Sbjct: 854 VIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVI---------LQ 913

Query: 741 NNDEALKQ--VEKVVFSPDV------------VAPTEEPIDQVNNNFDVLEQKEQSLEEQ 792
           NN   L Q   + + F  D+               TE+  DQ N   D   Q E  +   
Sbjct: 914 NNQTKLDQFDYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQ-NTESDHDYQSEIEINSD 973

BLAST of CmaCh15G011600 vs. Swiss-Prot
Match: YB21B_YEAST (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.1e-25
Identity = 126/536 (23.51%), Postives = 229/536 (42.72%), Query Frame = 1

Query: 261 KEKGSKSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMFLDFKEFNGGV 320
           ++K SK     D + +  D L I    SQT   +  +   +H  PN E+           
Sbjct: 434 QQKESKPTHTIDSNDELPDHLLIDSGASQTL--VRSAHYLHHATPNSEIN---------- 493

Query: 321 VYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDASGYRIILEGG 380
           +         I  IG++     +G    +K + +  ++  +L+SL  L            
Sbjct: 494 IVDAQKQDIPINAIGNLHFNFQNGTKTSIKAL-HTPNIAYDLLSLSELANQNITACFTRN 553

Query: 381 NLKVARGALVAITGTRRGSIYYLNGTTII-GHAAVAS----SKEQDISK----LWHMRLG 440
            L+ + G ++A    + G  Y+L+   +I  H +  +    +K + ++K    L H  LG
Sbjct: 554 TLERSDGTVLAPI-VKHGDFYWLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLG 613

Query: 441 QAGEKETLVNQGVLKGATT----GRIDF-------CEHCIFGKQ---KNVKFGTAIHQTK 500
            A  +   + + + K A T      I++       C  C+ GK    ++VK     +Q  
Sbjct: 614 HANFRS--IQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQES 673

Query: 501 -GILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNE--VLQIFLEWKKM 560
                Y+HTD++GP  ++      +F++F D+ ++  W+YP+  + E  +L +F      
Sbjct: 674 YEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAF 733

Query: 561 VENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEK 620
           ++NQ + ++  ++ D G EYT     K   + GI   +T     + +GVAER+N+TL+  
Sbjct: 734 IKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLND 793

Query: 621 VRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCP 680
            R +L  +GL    W  A+ ++  + N L VS    ++  +  +G    D   +  FG P
Sbjct: 794 CRTLLHCSGLPNHLWFSAVEFSTIIRNSL-VSPKNDKSARQ-HAGLAGLDITTILPFGQP 853

Query: 681 AYY--HVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRD-VTFDESEMFLQKI 740
                H  DSK+ PR      +  S+   GY ++ P   K V++ + V   +++  L + 
Sbjct: 854 VIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDNQSKLDQF 913

Query: 741 ENN----DEALKQVEKVVFSPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNE 764
             +    D+ L ++     S      TE+  DQ N   D   Q E  +    LVN+
Sbjct: 914 NYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQ-NTESDHDYQSEIEINSDPLVND 950

BLAST of CmaCh15G011600 vs. TrEMBL
Match: A5BPC1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003191 PE=4 SV=1)

HSP 1 Score: 956.1 bits (2470), Expect = 4.3e-275
Identity = 542/1272 (42.61%), Postives = 766/1272 (60.22%), Query Frame = 1

Query: 13   SSNLEVEKFDGTNNFGVWRGEVSDLLVMQDLDVSL--QEEMPEDMTEAEWTKLNRQACGI 72
            ++  +VEKF G N+FG+ R ++  LLV Q L  +L  ++ +P  M E +  +L  +A   
Sbjct: 3    TAKFDVEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSA 62

Query: 73   IRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHL 132
            I   LG        K   A E+W KLE+ YM KS+ N+L+ K KL+ F    G+S+  HL
Sbjct: 63   IILSLGDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEXHL 122

Query: 133  DDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALINN 192
            D FNKII +L N+D+ I DEDKA+LLL SL  SY  +   +++G  ++ F++V + L   
Sbjct: 123  DHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHAR 182

Query: 193  EMRKKEKETYQSSSSNVLTAHGRTSNWKKNECGESRLKSRGRSDNWRKLGKNECAYCRQK 252
            E++K+E+   +S     L   GR+   +K E      KSR +S    K  K +C  C ++
Sbjct: 183  ELQKQEESKEESGEG--LNIRGRS---EKREKKGKNSKSRSKS----KTKKFKCFICHKE 242

Query: 253  GHWKKDCSILKEKGSKSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMF 312
            GH+KKDC   ++   K  V R                ++     L  G  +    +K   
Sbjct: 243  GHFKKDCPDRRQNTVKKTVNR---------------WTRVRSGYLIQGALFTCVLSKLGL 302

Query: 313  LDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDA 372
              FKE +GG V +GN+  CKI+G G+V+IK +DG+ R L+DVRY+ +LK+NLISLG+LD 
Sbjct: 303  KTFKEADGGYVLLGNNKHCKILGTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDK 362

Query: 373  SGYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQDISKLWHMRL 432
            SGY    E  +L+VARG+L  + GT +  +Y L G T+ G  +    ++   +KLWH RL
Sbjct: 363  SGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTVTGKVSTVLKEDVGTTKLWHQRL 422

Query: 433  GQAGEK--ETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKGILDYVHTDVW 492
            G    +  + L  QGVL       + FCEHC+FGK   VKF  AIH+T+  LDY+H+D+W
Sbjct: 423  GHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLW 482

Query: 493  GPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKMVENQTDKKIKRLRS 552
            GP++  S+GG R+F+T IDDYS+ VW+Y +++K+E    F EWK +VE QT +K+K+LR+
Sbjct: 483  GPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRT 542

Query: 553  DNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEKVRCILSQAGLSKAF 612
            DNG E+  + F  +C+ EGI RH TV   PQQNG+AERMN+T++E+VRC+LS +GLSK F
Sbjct: 543  DNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVF 602

Query: 613  WAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCPAYYHVTDSKLDPRA 672
            WAEA   AVHL+NR P S    +TP E W+G   +DY  L VFGC AY H    KL+PRA
Sbjct: 603  WAEAAETAVHLINRSPSSALQFKTPQEKWTGK-AADYQHLKVFGCTAYVHTKTDKLEPRA 662

Query: 673  KKAKFMGFSKGVKGYRLWCPK--TSKIVNSRDVTFDESEMFLQKIENNDEALKQVEKVVF 732
             K  F+G+ KGVKGY+LW       K + SRDVTF+E +M  Q    + E L Q++    
Sbjct: 663  VKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQTPAKDVEGLDQLQF--- 722

Query: 733  SPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNERVEEPE------SIAKNRPRRVI 792
              +V   T +P        +  ++      ++ +V+ER  EP       ++ ++R +R +
Sbjct: 723  --EVEHETLQP--------EKSKETSSKTAQEEIVHERQNEPTQGLESYNLVRDRQKRQV 782

Query: 793  RKPARFDDTIAYAFSL------IDGVPNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWD 852
            + P R+      AF+L      +D  P +Y++AI S ++  W +A+ +E+ SL  N+TW+
Sbjct: 783  KPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWE 842

Query: 853  LVQLPKGKKEIGCKWVFAKKEDPFG---IRYKARLVAKGYTQKEGIDYNEIFSPVVKHSS 912
            LV  PK +K +G KWVF +K+   G    RYKARLVAKG++QKEG+DYNEIFSPVVKHSS
Sbjct: 843  LVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSS 902

Query: 913  IRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGF----------RVVGQQHLV 972
            IR+LLA VA  +LEL QLDVKTAFLHG+L+E IYM  P              +V  +   
Sbjct: 903  IRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPERLWGRNQGWSDDMLVACKEKR 962

Query: 973  EIDKLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSRFSLNNSTK 1032
             ++++K+ L   FEMKDLG+AK+ILGMEIERDR K  + L+Q                  
Sbjct: 963  HLEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQ------------------ 1022

Query: 1033 PVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSHAVH----- 1092
                      K      P + ++KR+ME IPY + VG++MY MVC+RPDL++AV      
Sbjct: 1023 ----------KFIHLKAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRY 1082

Query: 1093 -------------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTT 1152
                               +GT  +G+ +       L+ ++ GFVD+DYAG++D R+S T
Sbjct: 1083 MSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNS--QLETQLQGFVDADYAGNIDTRKSLT 1142

Query: 1153 GYLFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVF 1212
            GY+FT  GG V W++ LQS VALSTTEAEYMA+TEA KEAIW+ G+  +L + +G + V+
Sbjct: 1143 GYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVY 1202

Query: 1213 CDSQSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADNPADMLTKVVARE 1230
            CD+QSAI L+KNQ  H R+KHIDVR HF+R+II+ G+I + K+ T DNP+DMLTK +   
Sbjct: 1203 CDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVT 1206

BLAST of CmaCh15G011600 vs. TrEMBL
Match: Q7XTM9_ORYSJ (OSJNBa0033G05.13 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0033G05.13 PE=4 SV=2)

HSP 1 Score: 920.2 bits (2377), Expect = 2.6e-264
Identity = 533/1268 (42.03%), Postives = 746/1268 (58.83%), Query Frame = 1

Query: 13   SSNLEVEKFDGTNNFGVWRGEVSDLLVMQDLDVSLQ--EEMPEDMTEAEWTKLNRQACGI 72
            S   ++   D    F +W+ ++  +L  Q+LD +L   ++  +D +  E  K +R+A   
Sbjct: 3    SLKYDLPLLDRDTRFSLWQVKMRAVLAQQELDDALSGFDKRTQDWSNDE-KKRDRKAMSY 62

Query: 73   IRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHL 132
            I   L  +     +K   A  LW KLE   M K + +K++LK+KLF    ++  S+ +HL
Sbjct: 63   IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 122

Query: 133  DDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALINN 192
              F +I+ +L +++VK D++D AL+LL SLP SY     T+L+    +  ++V +AL   
Sbjct: 123  SAFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAK 182

Query: 193  EMRKKEKETYQSSSSNVLTAHGRTSNWKKNECGESRLKS----RGRSDNWRKLGKNECAY 252
            E  KK   + + S+S       R S  +KN   +SR KS    RGRS +  +     C Y
Sbjct: 183  EKMKKMVPS-EGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRY--KSCKY 242

Query: 253  CRQKGHWKKDCSIL---------------KEKGSKSNVVRDDDTDTDDALTISLSVSQTS 312
            C++ GH    C  L               KE+  K+ VV D+ +D +  +  +     + 
Sbjct: 243  CKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD 302

Query: 313  EWILDSGCSYHMCPNKEMFLDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKD 372
            +WILD+ C+YHMCPN++ F  ++   GG V MG+D+ C++ GIG+VQIKMFDG IR L D
Sbjct: 303  QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 362

Query: 373  VRYVSDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGT-RRGSIYYLNGTTIIG 432
            VR++ +LK++LISL  LD  GY+     G LKV +G+LV +  + +  ++Y+L GTTI+G
Sbjct: 363  VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILG 422

Query: 433  HAAVASSK--EQDISKLWHMRLGQAGE--KETLVNQGVLKGATTGRIDFCEHCIFGKQKN 492
            + A  S      D + LWHMRLG   E     L  +G+L G +  ++ FCEHCIFGK K 
Sbjct: 423  NVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKR 482

Query: 493  VKFGTAIHQTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQ 552
            VKF T+ H T+GILDYVH+D+WGP +  S GG R+ +T +DDYS+ VW Y ++HK +   
Sbjct: 483  VKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFN 542

Query: 553  IFLEWKKMVENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAER 612
            +F EWK MVE QT++K+K LR+DNG E+    F   C+ EGIVRH+TVP  PQQNGVAER
Sbjct: 543  VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 602

Query: 613  MNQTLIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYD 672
            MN+ +I K RC+LS AGL K FWAEA+S A +L+NR P   N  +TP+EVWSGSP ++Y 
Sbjct: 603  MNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYANK-KTPIEVWSGSP-ANYS 662

Query: 673  KLHVFGCPAYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEM 732
             L VFGC AY HV + KL+PRA K  F+G+   VKGY+LWCP+T K+V SR+        
Sbjct: 663  DLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKVVISRN-------- 722

Query: 733  FLQKIENNDEALKQVEKVVFSPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNE-RV 792
                             VVF   ++       D+ + N  V  Q++ S++ + L+N    
Sbjct: 723  -----------------VVFHESIMLH-----DKPSTNVPVESQEKASVQVEHLINSGHA 782

Query: 793  EEPESIAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQEIA 852
             E E +A N+   VI                     +S    +Q        +   +   
Sbjct: 783  PEKEDVAINQDAPVIE--------------------DSDSSTVQQSPKRSIAKDKPKRNK 842

Query: 853  SLEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFGIRYKARLVAKGYTQKEGIDYNEIFSP 912
             LE N TW+LV+LPK KK I CKW+F +KE                            SP
Sbjct: 843  ELEKNHTWELVKLPKEKKHIRCKWIFKRKEG--------------------------MSP 902

Query: 913  VVKHSSIRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVGQQHLVEID- 972
                   R   ++VA  + EL Q+DVKTAFLHG+LEE+IYM QP GF V G+++LV  D 
Sbjct: 903  ---SDEARYKASIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRDS 962

Query: 973  KLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSRFSLNNSTKPVS 1032
            KLK +LS  FEMKDLG AKKILGMEI R+R    ++L+Q  Y+ KV  RF+++++ KPVS
Sbjct: 963  KLKAQLSSEFEMKDLGVAKKILGMEITRERHSDKLYLSQKGYIEKVFRRFNMHDA-KPVS 1022

Query: 1033 TPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSHAVH-------- 1092
            TPLA HF+LS+ +CP SD +  YM  +PY++AVG+LMYAM+C+RPDLSHA+         
Sbjct: 1023 TPLAAHFRLSSDLCPQSDYNIEYMSRVPYSSAVGSLMYAMICSRPDLSHALSVVSRYMAN 1082

Query: 1093 ----------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTTGYL 1152
                             GT    ++F +       + + G+VDSD+AGDLD+RRS TGY+
Sbjct: 1083 PGKEHWKDVQWIFRYLHGTSSACLQFGRSR-----DGLVGYVDSDFAGDLDRRRSLTGYV 1142

Query: 1153 FTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVFCDS 1212
            FT+ G  V W+++LQ+TVALSTTEAEYMA++EA KEAIW+ GL  +L      I++FCDS
Sbjct: 1143 FTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDS 1179

Query: 1213 QSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADNPADMLTKVVAREKFC 1229
            QSAICL+K+Q+ H RTKHIDVR+HFIR +I++GD+++ KI T DNPADM+TK V   KF 
Sbjct: 1203 QSAICLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFE 1179

BLAST of CmaCh15G011600 vs. TrEMBL
Match: Q94LG0_ORYSJ (Putative retroelement pol polyprotein OS=Oryza sativa subsp. japonica GN=LOC_Os03g27910 PE=4 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 1.8e-241
Identity = 498/1222 (40.75%), Postives = 710/1222 (58.10%), Query Frame = 1

Query: 13   SSNLEVEKFDGTNNFGVWRGEVSDLLVM-QDLDVSLQEEMPEDMTE--AEWTKLNRQACG 72
            S   ++   D    F +W+ ++  +L    DLD +L+    +  TE  AE  + +R+A  
Sbjct: 3    SIKYDLPLLDYKTRFSLWQVKMRAILAQTSDLDEALESFGKKKSTEWTAEEKRKDRKALL 62

Query: 73   IIRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEH 132
            +I+  L  D     ++   A ELW KLE+  M K + +K+++K KLF    +E  S+  H
Sbjct: 63   LIQLHLSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNH 122

Query: 133  LDDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALIN 192
            +  F +I+ +L++++V+ DDED  LLLL SLP SY     T+L     +   +V  AL N
Sbjct: 123  ISVFKEIVVDLVSIEVQFDDEDLGLLLLCSLPSSYANFRDTILLSRDELTLAEVYEALQN 182

Query: 193  NEMRKKEKETYQSSSSN-VLTAHGRTSNWKKNECGE-SRLKSRGRSDNWRKLGKNECAYC 252
             E  K   ++  SSS    L   GR+     N+  +  + +SRGRS   +  GK  C YC
Sbjct: 183  REKMKGMVQSDASSSKGEALQVRGRSEQRTYNDSSDRDKSQSRGRS---KSRGKKFCKYC 242

Query: 253  RQKGHWKKDCSILKEK------GSKSNVVRDDDTDTDDALTISLS-VSQTSEWILDSGCS 312
            ++K H+ ++C  L+ K      G  S V   +++D+ D L +    V+   EWILD+ CS
Sbjct: 243  KKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTACS 302

Query: 313  YHMCPNKEMFLDFKEF-NGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLK 372
            +H+C N++ F  +K   NG VV MG+D+  +I+GIGSVQIK  DG+ R LKDVR++  + 
Sbjct: 303  FHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMA 362

Query: 373  KNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGS-IYYLNGTTIIGHA-AVASS 432
            +NLISL  LDA GY+    GG +KV++G+LV + G    + +Y L G+T+ G   A A S
Sbjct: 363  RNLISLSTLDAEGYKYSSSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVS 422

Query: 433  KEQDI-SKLWHMRLGQAGE--KETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIH 492
            K++ I + LWHMRLG   E     L+ + +L G T G++ FCEHC+FGK K VKF T++H
Sbjct: 423  KDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVH 482

Query: 493  QTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKM 552
            +TKGILDYVHTD+WGP++   LGG R+ +T IDDYS+ VW Y ++HK++    F EWK  
Sbjct: 483  RTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVR 542

Query: 553  VENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEK 612
            +E QT+K++K LR+DNGGE+  D F   CR EGIVRH T+P  PQQNGVAERMN+T+I K
Sbjct: 543  IERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISK 602

Query: 613  VRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCP 672
             RC+LS A ++K FWAEA + A +L+NR P      +TP+EVWSG P +DY +L VFGC 
Sbjct: 603  ARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMP-ADYSQLRVFGCT 662

Query: 673  AYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIENN 732
            AY HV + KL+PRA K  F+G+  GVK Y+LW P+T+K    R V F++S MF      N
Sbjct: 663  AYAHVDNGKLEPRAIKCLFLGYGSGVKRYKLWNPETNKTFMRRSVVFNKSVMF------N 722

Query: 733  DEALKQVEKVVFSPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNERVEEPESIAKN 792
            D                     P D +    D  +Q  Q               E IA  
Sbjct: 723  DS-------------------LPTDVIPGGSDEEQQYPQD--------------EPIAHR 782

Query: 793  RPRRVIRKPARFD---DTIAYAFSLIDGVPNS-----YKDAIQSPDSLHWQEAVNQEIAS 852
            R +R    P R     D + YAFS  + V N+     Y +A+ S D   W  A+ +E+ S
Sbjct: 783  RTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQS 842

Query: 853  LEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFGI---RYKARLVAKGYTQKEGID----- 912
            LE N TW+LV LPK KK + CKW+F +KE        R+KA +VA    + E +D     
Sbjct: 843  LEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSSSEPPRFKASIVAMHDLELEQLDVKTAF 902

Query: 913  -YNEIFSPVVKHSSIRILLA----LVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFR 972
             Y E+   +        ++      V +    L  L       +      IY+   V   
Sbjct: 903  LYGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKS-GSPIYLLLYVDDM 962

Query: 973  VVGQQHLVEIDKLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSR 1032
            ++  +   +I  LK +LS  F+MKDLG AKKILGM+I RDR  G ++L+Q  Y++KVL R
Sbjct: 963  LIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMKITRDRNSGLLFLSQQSYIKKVLQR 1022

Query: 1033 FSLNNSTKPVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSH 1092
            F+++++ KPVSTP+APHFKLSA  C S+D+D  YM  +PY++AVG+LMY+MVC+RPDLSH
Sbjct: 1023 FNMHDA-KPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYSMVCSRPDLSH 1082

Query: 1093 AVHSGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTTGYLFTMAGGPVCWRST 1152
            A+             + M NLD              LDKRRS TGY+FT+    V W++T
Sbjct: 1083 AM---------SLISRYMANLD--------------LDKRRSLTGYVFTIGSCAVSWKAT 1142

Query: 1153 LQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVFCDSQSAICLSKNQVHH 1196
            LQ  V  STTEAEYMA+ EA KE++W+ GL  +L      I++FCDSQSAICL+K+ + H
Sbjct: 1143 LQPVVVQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDHMFH 1156

BLAST of CmaCh15G011600 vs. TrEMBL
Match: A0A151RYL1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_030746 PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 1.1e-235
Identity = 414/724 (57.18%), Postives = 521/724 (71.96%), Query Frame = 1

Query: 232 RSDNWRKLGKNECAYCRQKGHWKKDCSILKEKGSKSNV----VRDDDTDTDDALTISLSV 291
           RS +  K+GK+ECA+CR+KGHWKKDC  LK KG    V    V +   D+D +L +S S 
Sbjct: 8   RSKSKAKVGKDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVAEYVDDSDCSLAVSGST 67

Query: 292 SQTSEWILDSGCSYHMCPNKEMFLDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIR 351
           S +S W+LDSGCS HMCPN+E F DF+E   GVVY  ND      GIGS+++K  DG IR
Sbjct: 68  SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDGAIR 127

Query: 352 KLKDVRYVSDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGS-IYYLNGT 411
            LKDVR+V  L +NLIS+G L+  G+ +  EGG +K+  GALV + G R+ + +YY  GT
Sbjct: 128 TLKDVRFVPSLSRNLISVGALEEKGFTVHAEGGVMKIISGALVVMKGVRKNNRLYYYQGT 187

Query: 412 TIIGHAAVASSKEQDI--SKLWHMRLGQAGEKET--LVNQGVLKGATTGRIDFCEHCIFG 471
           TIIG AAVASS E+++  +KLWHMRLG AGE+    L+ QG+LK     ++DFCEHC+ G
Sbjct: 188 TIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFCEHCVKG 247

Query: 472 KQKNVKFGTAIHQTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKN 531
           K+  VKFGTAIH TKGILDYVH+DVWGP+K  SL G  ++VTF+DD+S+ +W+Y M+ K+
Sbjct: 248 KKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRRIWVYAMKTKD 307

Query: 532 EVLQIFLEWKKMVENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNG 591
           EVL IFL+WKK +E QT +KIK  R+DNGGEYT DPF K C + GIVRHFTV   PQQNG
Sbjct: 308 EVLGIFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFTVKHTPQQNG 367

Query: 592 VAERMNQTLIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPV 651
           VAERMN+TL+EKVRC+LS AGL K FWAEA+ YA HL+NRLP S  GG+TPLE W G P 
Sbjct: 368 VAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPA 427

Query: 652 SDYDKLHVFGCPAYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFD 711
           +DYD LHVFGC AYYHV +SKLDPRAKKA FMG + GVKGYRLWC +T K + SRDVTFD
Sbjct: 428 TDYDSLHVFGCTAYYHVKESKLDPRAKKAIFMGIASGVKGYRLWCLETKKTIISRDVTFD 487

Query: 712 ESEMFLQKIENNDEALKQVEKVVFSPDVVAPT--EEPIDQVNNNFDVLEQKEQSLEEQSL 771
           ES M L K+    +     ++V F   +V P   EE    V+         E+S EE+  
Sbjct: 488 ESTM-LGKVTTEQKKNGTPKQVEFERKIVFPANDEEKTPMVD---------EESDEEEVH 547

Query: 772 VNERVEEPESIAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSYKDAIQSPDSLHWQEA 831
           + E  ++ ESIA  +P+R    PAR+ D ++YA  +  D +P +Y +A++  +   W+ A
Sbjct: 548 IQEPPQQLESIALRKPKRTTIMPARYVDMVSYASPVASDDIPTTYIEAVKGSEEDKWRSA 607

Query: 832 VNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKKE---DPFGIRYKARLVAKGYTQKEG 891
           +++E+ SL  NQTW L  LPKGKK IGCKWV+AKK+   D   +RYKARLVAKGY QKEG
Sbjct: 608 MSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEG 667

Query: 892 IDYNEIFSPVVKHSSIRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVG 941
           IDYNE+FSPVVKHSSIR+LLALVAQ ++EL Q+DVKTAFLHGDLEEEIYMTQP GF+V G
Sbjct: 668 IDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAG 721

BLAST of CmaCh15G011600 vs. TrEMBL
Match: A5BGX3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003944 PE=4 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 4.3e-227
Identity = 484/1277 (37.90%), Postives = 705/1277 (55.21%), Query Frame = 1

Query: 18   VEKFDGTNNFGVWRGEVSDLLVMQDLDVSLQEEMPEDMTEAEWTKLNRQACGIIRSCLGK 77
            +EKFDGT+ F  WR ++ D L  + L + L    PE M   EW  L+RQ  G+IR  L +
Sbjct: 11   IEKFDGTD-FAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 70

Query: 78   DQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHLDDFNKII 137
               +  +K     +L   L   Y K S  NK++L  KLF     E  S+A+HL++FN I 
Sbjct: 71   SVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTIT 130

Query: 138  TNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLH--GITNIDFEDVSNALINNEMRKK 197
              L ++++  DDE +AL++L SLP S+E +   + +  G   + + D+ + ++  E+R++
Sbjct: 131  NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 190

Query: 198  EK-ETYQSSSSNVLTAHGRTSNWKKNECGESRLKSRGRSDNWRKLGKN-ECAYCRQKGHW 257
            +  ET  S S+  L   GR +N   N+ G S  ++  R+ +  + G+  +C  C + GH+
Sbjct: 191  DAGETSGSGSALNLETRGRGNNRNSNQ-GRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHF 250

Query: 258  KKDCSILKEKGS--KSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMFL 317
            K+ C   K+K     +N V ++     DAL +++  S   +W+LDSG S+H  P++E+  
Sbjct: 251  KRQCKSPKKKNEDDSANAVTEE---VQDALLLAVD-SPLDDWVLDSGASFHTTPHREIIQ 310

Query: 318  DFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDAS 377
            ++   + G VY+ + S   ++G+G V+I + +G +  L+ VR++ DL++NLIS+G LD  
Sbjct: 311  NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE 370

Query: 378  GYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQDISKLWHMRLG 437
            G+ I+  GG  KV +GA V   G + G++Y     T      +A +     + LWH RLG
Sbjct: 371  GHAILFVGGTWKVTKGARVLARGKKTGTLYM----TSCPRDTIAVADASTDTSLWHRRLG 430

Query: 438  QAGEK--ETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKGI-LDYVHTDVW 497
               EK  + L+++G L    +   D CE CI GKQK V F       K   L+ VHTD+W
Sbjct: 431  HMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLW 490

Query: 498  GPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKMVENQTDKKIKRLRS 557
            GP+   SLGG R+++TFIDD S+ VW+Y +++K +V   F +WK MVE +T  K      
Sbjct: 491  GPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKXDVFXTFKKWKAMVETETGLK------ 550

Query: 558  DNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEKVRCILSQAGLSKAF 617
                              GI    T+P  PQQNGVAERMN+TL E+ R +   AGL K F
Sbjct: 551  ------------------GIRMXKTIPXTPQQNGVAERMNRTLNERARSMRLHAGLPKTF 610

Query: 618  WAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCPAYYHVTD---SKLD 677
            WA+A+S   +L+NR P      R   EVWSG  V  +  L VF C +Y H+     SKLD
Sbjct: 611  WADAVSTXAYLINRGPSVPMEFRLXEEVWSGKEVK-FSXLKVFCCVSYVHIDSDARSKLD 670

Query: 678  PRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIENNDEALKQVEKVV 737
             ++K   F+G+     GYR W  +  KI+ SR+V F+E  M+  +               
Sbjct: 671  AKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDR--------------- 730

Query: 738  FSPDVVAPTEEPIDQVNNNFDVLEQKEQSL------EEQSLVNERVEEPESIAK-NRPRR 797
                 V      IDQ  + F  L++  +S       +++  VN +V+    + +  R  R
Sbjct: 731  ---STVTSDVTEIDQKKSEFVNLDELTESTVQKGGEKDKENVNSQVDLSTPVXEVRRSSR 790

Query: 798  VIRKPARFDDTIAYAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWDLVQL 857
             IR P R+   + Y      G P  Y +A+Q  +S  W+ A+  E+ SL  NQTW+L +L
Sbjct: 791  NIRPPQRYSPVLNYLLLTDGGEPECYBEALQDENSSKWELAMKDEMDSLLGNQTWELTEL 850

Query: 858  PKGKKEIGCKWVFAKKEDPFGI-RYKARLVAKGYTQKEGIDYNEIFSPVVKHSSIRILLA 917
              GKK +  KWV+  K +  G  RYKARLV KG+ QKEGIDY EIFSPVVK S+IR++L 
Sbjct: 851  XVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLG 910

Query: 918  LVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVGQQHLV---------------- 977
            +VA  NL L QLDVKTAFLHGDLEE++YM QP GF V GQ++LV                
Sbjct: 911  MVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQ 970

Query: 978  ---EIDKLKDELSKT---------FEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRK 1037
               + D     +            F MKDLG AK+ILGM I RD+  GT+ L+QS+Y++K
Sbjct: 971  WYKKFDNFMHRIGFKRCEADHCCYFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVKK 1030

Query: 1038 VLSRFSLNNSTKPVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRP 1097
            VLSRF++N + KPVSTPL  HFKLS    P +++++ +M  +PY +A+G+LMY MVCTRP
Sbjct: 1031 VLSRFNMNEA-KPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYTMVCTRP 1090

Query: 1098 DLSHAVH------------------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSD 1157
            D++HAV                          G++D  + F    +     ++ G+ D+D
Sbjct: 1091 DIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASL-----KLQGYGDAD 1150

Query: 1158 YAGDLDKRRSTTGYLFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLIN 1217
            +  D+D R+STTG++FT++G  + W S LQ  V LSTTE EY+A TE  KE IW+HG ++
Sbjct: 1151 FVSDIDSRKSTTGFVFTLSGTAISWASNLQKIVTLSTTEVEYVAATEVGKEMIWLHGFLD 1210

Query: 1218 DLGISQGHIDVFCDSQSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADN 1223
            +LG  Q    +  DSQSAI L+KN   H+++KHI  ++HFIR ++    + L KI  + N
Sbjct: 1211 ELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQTKYHFIRYLVEDKLVILKKICGSKN 1228

BLAST of CmaCh15G011600 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 136.0 bits (341), Expect = 1.6e-31
Identity = 68/134 (50.75%), Postives = 93/134 (69.40%), Query Frame = 1

Query: 801 PNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFGI 860
           P++Y +A    + L W  A++ EI ++E   TW++  LP  KK IGCKWV+  K +  G 
Sbjct: 86  PSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 145

Query: 861 --RYKARLVAKGYTQKEGIDYNEIFSPVVKHSSIRILLALVAQFNLELAQLDVKTAFLHG 920
             RYKARLVAKGYTQ+EGID+ E FSPV K +S++++LA+ A +N  L QLD+  AFL+G
Sbjct: 146 IERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 205

Query: 921 DLEEEIYMTQPVGF 933
           DL+EEIYM  P G+
Sbjct: 206 DLDEEIYMKLPPGY 216

BLAST of CmaCh15G011600 vs. TAIR10
Match: ATMG00300.1 (ATMG00300.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-18
Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 1

Query: 380 GNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQDISKLWHMRLGQAGEK--E 439
           G LKV +G    + G R  S+Y L G+   G + +A + + D ++LWH RL    ++  E
Sbjct: 27  GVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAK-DETRLWHSRLAHMSQRGME 86

Query: 440 TLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKGILDYVHTDVWG 490
            LV +G L  +    + FCE CI+GK   V F T  H TK  LDYVH+D+WG
Sbjct: 87  LLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

BLAST of CmaCh15G011600 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-18
Identity = 69/215 (32.09%), Postives = 105/215 (48.84%), Query Frame = 1

Query: 949  ELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSRFSLNNSTKPVSTPLA 1008
            +LS TF MKDLG     LG++I+       ++L+Q++Y  ++L+   + +  KP+STPL 
Sbjct: 26   QLSSTFSMKDLGPVHYFLGIQIKTH--PSGLFLSQTKYAEQILNNAGMLDC-KPMSTPLP 85

Query: 1009 PHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSHAVH------------ 1068
               KL++S+  +     +Y +   + + VGAL Y +  TRPD+S+AV+            
Sbjct: 86   --LKLNSSVSTA-----KYPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLA 145

Query: 1069 ------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTTGYLFTMA 1128
                         GTI  G+   K    N    V  F DSD+AG    RRSTTG+   + 
Sbjct: 146  DFDLLKRVLRYVKGTIFHGLYIHKNSKLN----VQAFCDSDWAGCTSTRRSTTGFCTFLG 205

Query: 1129 GGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIW 1140
               + W +  Q TV+ S+TE EY A+     E  W
Sbjct: 206  CNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmaCh15G011600 vs. TAIR10
Match: ATMG00710.1 (ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-15
Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 1

Query: 587 MNQTLIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYD 646
           MN+T+IEKVR +L + GL K F A+A + AVH++N+ P +      P EVW  S V  Y 
Sbjct: 1   MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQS-VPTYS 60

Query: 647 KLHVFGCPAYYHVTDSKLDPRAKKAKFMG 676
            L  FGC AY H  + KL PRAKK +  G
Sbjct: 61  YLRRFGCVAYIHCDEGKLKPRAKKGEEKG 88

BLAST of CmaCh15G011600 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-14
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 1

Query: 792 YAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWDLVQLPKGKKEIGCKWVF 851
           Y+ ++   +    K  I +     W +A+ +E+ +L  N+TW LV  P  +  +GCKWVF
Sbjct: 16  YSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVF 75

Query: 852 AKKEDPFGI--RYKARLVAKGYTQKEGIDYNEIFSPVVKHSSIRILLALVAQFNLELAQ 909
             K    G   R KARLVAKG+ Q+EGI + E +SPVV+ ++IR +L +  Q  LE+ Q
Sbjct: 76  KTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ--LEVGQ 132

BLAST of CmaCh15G011600 vs. NCBI nr
Match: gi|147798869|emb|CAN61630.1| (hypothetical protein VITISV_003191 [Vitis vinifera])

HSP 1 Score: 956.1 bits (2470), Expect = 6.1e-275
Identity = 542/1272 (42.61%), Postives = 766/1272 (60.22%), Query Frame = 1

Query: 13   SSNLEVEKFDGTNNFGVWRGEVSDLLVMQDLDVSL--QEEMPEDMTEAEWTKLNRQACGI 72
            ++  +VEKF G N+FG+ R ++  LLV Q L  +L  ++ +P  M E +  +L  +A   
Sbjct: 3    TAKFDVEKFTGKNDFGLXRLKMRALLVQQGLQDALLGEKNLPSTMQEKQKIELLEKAHSA 62

Query: 73   IRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHL 132
            I   LG        K   A E+W KLE+ YM KS+ N+L+ K KL+ F    G+S+  HL
Sbjct: 63   IILSLGDTVLREXAKAKSAAEVWLKLESLYMTKSLANRLHKKIKLYTFKMTPGMSIEXHL 122

Query: 133  DDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALINN 192
            D FNKII +L N+D+ I DEDKA+LLL SL  SY  +   +++G  ++ F++V + L   
Sbjct: 123  DHFNKIILDLENIDITISDEDKAILLLTSLDASYTNMKDAIMYGRDSLTFDEVQSILHAR 182

Query: 193  EMRKKEKETYQSSSSNVLTAHGRTSNWKKNECGESRLKSRGRSDNWRKLGKNECAYCRQK 252
            E++K+E+   +S     L   GR+   +K E      KSR +S    K  K +C  C ++
Sbjct: 183  ELQKQEESKEESGEG--LNIRGRS---EKREKKGKNSKSRSKS----KTKKFKCFICHKE 242

Query: 253  GHWKKDCSILKEKGSKSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMF 312
            GH+KKDC   ++   K  V R                ++     L  G  +    +K   
Sbjct: 243  GHFKKDCPDRRQNTVKKTVNR---------------WTRVRSGYLIQGALFTCVLSKLGL 302

Query: 313  LDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDA 372
              FKE +GG V +GN+  CKI+G G+V+IK +DG+ R L+DVRY+ +LK+NLISLG+LD 
Sbjct: 303  KTFKEADGGYVLLGNNKHCKILGTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDK 362

Query: 373  SGYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQDISKLWHMRL 432
            SGY    E  +L+VARG+L  + GT +  +Y L G T+ G  +    ++   +KLWH RL
Sbjct: 363  SGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTVTGKVSTVLKEDVGTTKLWHQRL 422

Query: 433  GQAGEK--ETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKGILDYVHTDVW 492
            G    +  + L  QGVL       + FCEHC+FGK   VKF  AIH+T+  LDY+H+D+W
Sbjct: 423  GHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLW 482

Query: 493  GPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKMVENQTDKKIKRLRS 552
            GP++  S+GG R+F+T IDDYS+ VW+Y +++K+E    F EWK +VE QT +K+K+LR+
Sbjct: 483  GPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRT 542

Query: 553  DNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEKVRCILSQAGLSKAF 612
            DNG E+  + F  +C+ EGI RH TV   PQQNG+AERMN+T++E+VRC+LS +GLSK F
Sbjct: 543  DNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVF 602

Query: 613  WAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCPAYYHVTDSKLDPRA 672
            WAEA   AVHL+NR P S    +TP E W+G   +DY  L VFGC AY H    KL+PRA
Sbjct: 603  WAEAAETAVHLINRSPSSALQFKTPQEKWTGK-AADYQHLKVFGCTAYVHTKTDKLEPRA 662

Query: 673  KKAKFMGFSKGVKGYRLWCPK--TSKIVNSRDVTFDESEMFLQKIENNDEALKQVEKVVF 732
             K  F+G+ KGVKGY+LW       K + SRDVTF+E +M  Q    + E L Q++    
Sbjct: 663  VKCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQTPAKDVEGLDQLQF--- 722

Query: 733  SPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNERVEEPE------SIAKNRPRRVI 792
              +V   T +P        +  ++      ++ +V+ER  EP       ++ ++R +R +
Sbjct: 723  --EVEHETLQP--------EKSKETSSKTAQEEIVHERQNEPTQGLESYNLVRDRQKRQV 782

Query: 793  RKPARFDDTIAYAFSL------IDGVPNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWD 852
            + P R+      AF+L      +D  P +Y++AI S ++  W +A+ +E+ SL  N+TW+
Sbjct: 783  KPPKRYGQAEMTAFALSVAEEIVDMEPKTYQEAINSNEADQWVKAIQEEMDSLRKNETWE 842

Query: 853  LVQLPKGKKEIGCKWVFAKKEDPFG---IRYKARLVAKGYTQKEGIDYNEIFSPVVKHSS 912
            LV  PK +K +G KWVF +K+   G    RYKARLVAKG++QKEG+DYNEIFSPVVKHSS
Sbjct: 843  LVTKPKDRKVVGSKWVFKRKQGTLGNEAPRYKARLVAKGFSQKEGVDYNEIFSPVVKHSS 902

Query: 913  IRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGF----------RVVGQQHLV 972
            IR+LLA VA  +LEL QLDVKTAFLHG+L+E IYM  P              +V  +   
Sbjct: 903  IRLLLAFVAHEDLELDQLDVKTAFLHGELDELIYMQPPERLWGRNQGWSDDMLVACKEKR 962

Query: 973  EIDKLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSRFSLNNSTK 1032
             ++++K+ L   FEMKDLG+AK+ILGMEIERDR K  + L+Q                  
Sbjct: 963  HLEQVKEMLKAEFEMKDLGSAKRILGMEIERDRSKRVLRLSQ------------------ 1022

Query: 1033 PVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSHAVH----- 1092
                      K      P + ++KR+ME IPY + VG++MY MVC+RPDL++AV      
Sbjct: 1023 ----------KFIHLKAPETHEEKRFMERIPYASMVGSVMYTMVCSRPDLAYAVSMISRY 1082

Query: 1093 -------------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTT 1152
                               +GT  +G+ +       L+ ++ GFVD+DYAG++D R+S T
Sbjct: 1083 MSCPGKPHWQAVKWLFQYLAGTRSLGLVYGGNS--QLETQLQGFVDADYAGNIDTRKSLT 1142

Query: 1153 GYLFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVF 1212
            GY+FT  GG V W++ LQS VALSTTEAEYMA+TEA KEAIW+ G+  +L + +G + V+
Sbjct: 1143 GYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKEAIWLKGITEELAMYRGKVVVY 1202

Query: 1213 CDSQSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADNPADMLTKVVARE 1230
            CD+QSAI L+KNQ  H R+KHIDVR HF+R+II+ G+I + K+ T DNP+DMLTK +   
Sbjct: 1203 CDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVT 1206

BLAST of CmaCh15G011600 vs. NCBI nr
Match: gi|38344889|emb|CAD41912.2| (OSJNBa0033G05.13 [Oryza sativa Japonica Group])

HSP 1 Score: 920.2 bits (2377), Expect = 3.7e-264
Identity = 533/1268 (42.03%), Postives = 746/1268 (58.83%), Query Frame = 1

Query: 13   SSNLEVEKFDGTNNFGVWRGEVSDLLVMQDLDVSLQ--EEMPEDMTEAEWTKLNRQACGI 72
            S   ++   D    F +W+ ++  +L  Q+LD +L   ++  +D +  E  K +R+A   
Sbjct: 3    SLKYDLPLLDRDTRFSLWQVKMRAVLAQQELDDALSGFDKRTQDWSNDE-KKRDRKAMSY 62

Query: 73   IRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHL 132
            I   L  +     +K   A  LW KLE   M K + +K++LK+KLF    ++  S+ +HL
Sbjct: 63   IHLHLSNNILQEVLKEETAAGLWLKLEQICMTKDLTSKMHLKQKLFLHKLQDDGSVMDHL 122

Query: 133  DDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALINN 192
              F +I+ +L +++VK D++D AL+LL SLP SY     T+L+    +  ++V +AL   
Sbjct: 123  SAFKEIVADLESMEVKYDEKDLALILLCSLPSSYANFRDTILYSRDTLTLKEVYDALHAK 182

Query: 193  EMRKKEKETYQSSSSNVLTAHGRTSNWKKNECGESRLKS----RGRSDNWRKLGKNECAY 252
            E  KK   + + S+S       R S  +KN   +SR KS    RGRS +  +     C Y
Sbjct: 183  EKMKKMVPS-EGSNSQAEGLVVRGSQQEKNTNNKSRDKSSSSYRGRSKSRGRY--KSCKY 242

Query: 253  CRQKGHWKKDCSIL---------------KEKGSKSNVVRDDDTDTDDALTISLSVSQTS 312
            C++ GH    C  L               KE+  K+ VV D+ +D +  +  +     + 
Sbjct: 243  CKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAGCAQTSD 302

Query: 313  EWILDSGCSYHMCPNKEMFLDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKD 372
            +WILD+ C+YHMCPN++ F  ++   GG V MG+D+ C++ GIG+VQIKMFDG IR L D
Sbjct: 303  QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 362

Query: 373  VRYVSDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGT-RRGSIYYLNGTTIIG 432
            VR++ +LK++LISL  LD  GY+     G LKV +G+LV +  + +  ++Y+L GTTI+G
Sbjct: 363  VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILG 422

Query: 433  HAAVASSK--EQDISKLWHMRLGQAGE--KETLVNQGVLKGATTGRIDFCEHCIFGKQKN 492
            + A  S      D + LWHMRLG   E     L  +G+L G +  ++ FCEHCIFGK K 
Sbjct: 423  NVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKR 482

Query: 493  VKFGTAIHQTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQ 552
            VKF T+ H T+GILDYVH+D+WGP +  S GG R+ +T +DDYS+ VW Y ++HK +   
Sbjct: 483  VKFNTSTHTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFN 542

Query: 553  IFLEWKKMVENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAER 612
            +F EWK MVE QT++K+K LR+DNG E+    F   C+ EGIVRH+TVP  PQQNGVAER
Sbjct: 543  VFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAER 602

Query: 613  MNQTLIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYD 672
            MN+ +I K RC+LS AGL K FWAEA+S A +L+NR P   N  +TP+EVWSGSP ++Y 
Sbjct: 603  MNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYANK-KTPIEVWSGSP-ANYS 662

Query: 673  KLHVFGCPAYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEM 732
             L VFGC AY HV + KL+PRA K  F+G+   VKGY+LWCP+T K+V SR+        
Sbjct: 663  DLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKVVISRN-------- 722

Query: 733  FLQKIENNDEALKQVEKVVFSPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNE-RV 792
                             VVF   ++       D+ + N  V  Q++ S++ + L+N    
Sbjct: 723  -----------------VVFHESIMLH-----DKPSTNVPVESQEKASVQVEHLINSGHA 782

Query: 793  EEPESIAKNRPRRVIRKPARFDDTIAYAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQEIA 852
             E E +A N+   VI                     +S    +Q        +   +   
Sbjct: 783  PEKEDVAINQDAPVIE--------------------DSDSSTVQQSPKRSIAKDKPKRNK 842

Query: 853  SLEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFGIRYKARLVAKGYTQKEGIDYNEIFSP 912
             LE N TW+LV+LPK KK I CKW+F +KE                            SP
Sbjct: 843  ELEKNHTWELVKLPKEKKHIRCKWIFKRKEG--------------------------MSP 902

Query: 913  VVKHSSIRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVGQQHLVEID- 972
                   R   ++VA  + EL Q+DVKTAFLHG+LEE+IYM QP GF V G+++LV  D 
Sbjct: 903  ---SDEARYKASIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRDS 962

Query: 973  KLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSRFSLNNSTKPVS 1032
            KLK +LS  FEMKDLG AKKILGMEI R+R    ++L+Q  Y+ KV  RF+++++ KPVS
Sbjct: 963  KLKAQLSSEFEMKDLGVAKKILGMEITRERHSDKLYLSQKGYIEKVFRRFNMHDA-KPVS 1022

Query: 1033 TPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSHAVH-------- 1092
            TPLA HF+LS+ +CP SD +  YM  +PY++AVG+LMYAM+C+RPDLSHA+         
Sbjct: 1023 TPLAAHFRLSSDLCPQSDYNIEYMSRVPYSSAVGSLMYAMICSRPDLSHALSVVSRYMAN 1082

Query: 1093 ----------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTTGYL 1152
                             GT    ++F +       + + G+VDSD+AGDLD+RRS TGY+
Sbjct: 1083 PGKEHWKDVQWIFRYLHGTSSACLQFGRSR-----DGLVGYVDSDFAGDLDRRRSLTGYV 1142

Query: 1153 FTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVFCDS 1212
            FT+ G  V W+++LQ+TVALSTTEAEYMA++EA KEAIW+ GL  +L      I++FCDS
Sbjct: 1143 FTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDS 1179

Query: 1213 QSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADNPADMLTKVVAREKFC 1229
            QSAICL+K+Q+ H RTKHIDVR+HFIR +I++GD+++ KI T DNPADM+TK V   KF 
Sbjct: 1203 QSAICLTKDQMFHERTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFE 1179

BLAST of CmaCh15G011600 vs. NCBI nr
Match: gi|14029020|gb|AAK52561.1|AC079853_14 (Putative retroelement pol polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 844.3 bits (2180), Expect = 2.6e-241
Identity = 498/1222 (40.75%), Postives = 710/1222 (58.10%), Query Frame = 1

Query: 13   SSNLEVEKFDGTNNFGVWRGEVSDLLVM-QDLDVSLQEEMPEDMTE--AEWTKLNRQACG 72
            S   ++   D    F +W+ ++  +L    DLD +L+    +  TE  AE  + +R+A  
Sbjct: 3    SIKYDLPLLDYKTRFSLWQVKMRAILAQTSDLDEALESFGKKKSTEWTAEEKRKDRKALL 62

Query: 73   IIRSCLGKDQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEH 132
            +I+  L  D     ++   A ELW KLE+  M K + +K+++K KLF    +E  S+  H
Sbjct: 63   LIQLHLSNDILQEVLQEKTAAELWLKLESICMSKDLTSKMHIKMKLFSHKLQESGSVLNH 122

Query: 133  LDDFNKIITNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLHGITNIDFEDVSNALIN 192
            +  F +I+ +L++++V+ DDED  LLLL SLP SY     T+L     +   +V  AL N
Sbjct: 123  ISVFKEIVVDLVSIEVQFDDEDLGLLLLCSLPSSYANFRDTILLSRDELTLAEVYEALQN 182

Query: 193  NEMRKKEKETYQSSSSN-VLTAHGRTSNWKKNECGE-SRLKSRGRSDNWRKLGKNECAYC 252
             E  K   ++  SSS    L   GR+     N+  +  + +SRGRS   +  GK  C YC
Sbjct: 183  REKMKGMVQSDASSSKGEALQVRGRSEQRTYNDSSDRDKSQSRGRS---KSRGKKFCKYC 242

Query: 253  RQKGHWKKDCSILKEK------GSKSNVVRDDDTDTDDALTISLS-VSQTSEWILDSGCS 312
            ++K H+ ++C  L+ K      G  S V   +++D+ D L +    V+   EWILD+ CS
Sbjct: 243  KKKNHFIEECWKLQNKEKRKSDGKASVVTSAENSDSGDCLVVFAGCVASHDEWILDTACS 302

Query: 313  YHMCPNKEMFLDFKEF-NGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLK 372
            +H+C N++ F  +K   NG VV MG+D+  +I+GIGSVQIK  DG+ R LKDVR++  + 
Sbjct: 303  FHICINRDWFSSYKSVQNGDVVRMGDDNPREIVGIGSVQIKTHDGMTRTLKDVRHIPGMA 362

Query: 373  KNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGS-IYYLNGTTIIGHA-AVASS 432
            +NLISL  LDA GY+    GG +KV++G+LV + G    + +Y L G+T+ G   A A S
Sbjct: 363  RNLISLSTLDAEGYKYSSSGGVVKVSKGSLVYMIGDMNSANLYVLRGSTLHGSVTAAAVS 422

Query: 433  KEQDI-SKLWHMRLGQAGE--KETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIH 492
            K++ I + LWHMRLG   E     L+ + +L G T G++ FCEHC+FGK K VKF T++H
Sbjct: 423  KDEPIKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVH 482

Query: 493  QTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKM 552
            +TKGILDYVHTD+WGP++   LGG R+ +T IDDYS+ VW Y ++HK++    F EWK  
Sbjct: 483  RTKGILDYVHTDLWGPSRKAYLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVR 542

Query: 553  VENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEK 612
            +E QT+K++K LR+DNGGE+  D F   CR EGIVRH T+P  PQQNGVAERMN+T+I K
Sbjct: 543  IERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISK 602

Query: 613  VRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCP 672
             RC+LS A ++K FWAEA + A +L+NR P      +TP+EVWSG P +DY +L VFGC 
Sbjct: 603  ARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMP-ADYSQLRVFGCT 662

Query: 673  AYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIENN 732
            AY HV + KL+PRA K  F+G+  GVK Y+LW P+T+K    R V F++S MF      N
Sbjct: 663  AYAHVDNGKLEPRAIKCLFLGYGSGVKRYKLWNPETNKTFMRRSVVFNKSVMF------N 722

Query: 733  DEALKQVEKVVFSPDVVAPTEEPIDQVNNNFDVLEQKEQSLEEQSLVNERVEEPESIAKN 792
            D                     P D +    D  +Q  Q               E IA  
Sbjct: 723  DS-------------------LPTDVIPGGSDEEQQYPQD--------------EPIAHR 782

Query: 793  RPRRVIRKPARFD---DTIAYAFSLIDGVPNS-----YKDAIQSPDSLHWQEAVNQEIAS 852
            R +R    P R     D + YAFS  + V N+     Y +A+ S D   W  A+ +E+ S
Sbjct: 783  RTKRSCGAPVRLIEECDMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQS 842

Query: 853  LEINQTWDLVQLPKGKKEIGCKWVFAKKEDPFGI---RYKARLVAKGYTQKEGID----- 912
            LE N TW+LV LPK KK + CKW+F +KE        R+KA +VA    + E +D     
Sbjct: 843  LEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSSSEPPRFKASIVAMHDLELEQLDVKTAF 902

Query: 913  -YNEIFSPVVKHSSIRILLA----LVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFR 972
             Y E+   +        ++      V +    L  L       +      IY+   V   
Sbjct: 903  LYGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKS-GSPIYLLLYVDDM 962

Query: 973  VVGQQHLVEIDKLKDELSKTFEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRKVLSR 1032
            ++  +   +I  LK +LS  F+MKDLG AKKILGM+I RDR  G ++L+Q  Y++KVL R
Sbjct: 963  LIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMKITRDRNSGLLFLSQQSYIKKVLQR 1022

Query: 1033 FSLNNSTKPVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRPDLSH 1092
            F+++++ KPVSTP+APHFKLSA  C S+D+D  YM  +PY++AVG+LMY+MVC+RPDLSH
Sbjct: 1023 FNMHDA-KPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYSMVCSRPDLSH 1082

Query: 1093 AVHSGTIDVGIKFQKQEMFNLDNRVAGFVDSDYAGDLDKRRSTTGYLFTMAGGPVCWRST 1152
            A+             + M NLD              LDKRRS TGY+FT+    V W++T
Sbjct: 1083 AM---------SLISRYMANLD--------------LDKRRSLTGYVFTIGSCAVSWKAT 1142

Query: 1153 LQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLGISQGHIDVFCDSQSAICLSKNQVHH 1196
            LQ  V  STTEAEYMA+ EA KE++W+ GL  +L      I++FCDSQSAICL+K+ + H
Sbjct: 1143 LQPVVVQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDHMFH 1156

BLAST of CmaCh15G011600 vs. NCBI nr
Match: gi|1012336336|gb|KYP47640.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan])

HSP 1 Score: 825.1 bits (2130), Expect = 1.6e-235
Identity = 414/724 (57.18%), Postives = 521/724 (71.96%), Query Frame = 1

Query: 232 RSDNWRKLGKNECAYCRQKGHWKKDCSILKEKGSKSNV----VRDDDTDTDDALTISLSV 291
           RS +  K+GK+ECA+CR+KGHWKKDC  LK KG    V    V +   D+D +L +S S 
Sbjct: 8   RSKSKAKVGKDECAFCREKGHWKKDCPKLKNKGQSKTVADSNVAEYVDDSDCSLAVSGST 67

Query: 292 SQTSEWILDSGCSYHMCPNKEMFLDFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIR 351
           S +S W+LDSGCS HMCPN+E F DF+E   GVVY  ND      GIGS+++K  DG IR
Sbjct: 68  SSSSAWLLDSGCSNHMCPNREWFYDFRELEEGVVYTANDVPLTTHGIGSIRLKNRDGAIR 127

Query: 352 KLKDVRYVSDLKKNLISLGVLDASGYRIILEGGNLKVARGALVAITGTRRGS-IYYLNGT 411
            LKDVR+V  L +NLIS+G L+  G+ +  EGG +K+  GALV + G R+ + +YY  GT
Sbjct: 128 TLKDVRFVPSLSRNLISVGALEEKGFTVHAEGGVMKIISGALVVMKGVRKNNRLYYYQGT 187

Query: 412 TIIGHAAVASSKEQDI--SKLWHMRLGQAGEKET--LVNQGVLKGATTGRIDFCEHCIFG 471
           TIIG AAVASS E+++  +KLWHMRLG AGE+    L+ QG+LK     ++DFCEHC+ G
Sbjct: 188 TIIGTAAVASSDEKELESAKLWHMRLGHAGERSLNLLMKQGLLKNIQACKLDFCEHCVKG 247

Query: 472 KQKNVKFGTAIHQTKGILDYVHTDVWGPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKN 531
           K+  VKFGTAIH TKGILDYVH+DVWGP+K  SL G  ++VTF+DD+S+ +W+Y M+ K+
Sbjct: 248 KKTRVKFGTAIHDTKGILDYVHSDVWGPSKTASLAGNHYYVTFVDDFSRRIWVYAMKTKD 307

Query: 532 EVLQIFLEWKKMVENQTDKKIKRLRSDNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNG 591
           EVL IFL+WKK +E QT +KIK  R+DNGGEYT DPF K C + GIVRHFTV   PQQNG
Sbjct: 308 EVLGIFLKWKKRMETQTGRKIKHFRTDNGGEYTSDPFKKACEESGIVRHFTVKHTPQQNG 367

Query: 592 VAERMNQTLIEKVRCILSQAGLSKAFWAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPV 651
           VAERMN+TL+EKVRC+LS AGL K FWAEA+ YA HL+NRLP S  GG+TPLE W G P 
Sbjct: 368 VAERMNRTLLEKVRCMLSNAGLGKQFWAEAVVYASHLINRLPSSAIGGKTPLEKWFGKPA 427

Query: 652 SDYDKLHVFGCPAYYHVTDSKLDPRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFD 711
           +DYD LHVFGC AYYHV +SKLDPRAKKA FMG + GVKGYRLWC +T K + SRDVTFD
Sbjct: 428 TDYDSLHVFGCTAYYHVKESKLDPRAKKAIFMGIASGVKGYRLWCLETKKTIISRDVTFD 487

Query: 712 ESEMFLQKIENNDEALKQVEKVVFSPDVVAPT--EEPIDQVNNNFDVLEQKEQSLEEQSL 771
           ES M L K+    +     ++V F   +V P   EE    V+         E+S EE+  
Sbjct: 488 ESTM-LGKVTTEQKKNGTPKQVEFERKIVFPANDEEKTPMVD---------EESDEEEVH 547

Query: 772 VNERVEEPESIAKNRPRRVIRKPARFDDTIAYAFSLI-DGVPNSYKDAIQSPDSLHWQEA 831
           + E  ++ ESIA  +P+R    PAR+ D ++YA  +  D +P +Y +A++  +   W+ A
Sbjct: 548 IQEPPQQLESIALRKPKRTTIMPARYVDMVSYASPVASDDIPTTYIEAVKGSEEDKWRSA 607

Query: 832 VNQEIASLEINQTWDLVQLPKGKKEIGCKWVFAKKE---DPFGIRYKARLVAKGYTQKEG 891
           +++E+ SL  NQTW L  LPKGKK IGCKWV+AKK+   D   +RYKARLVAKGY QKEG
Sbjct: 608 MSEEMESLRRNQTWKLANLPKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEG 667

Query: 892 IDYNEIFSPVVKHSSIRILLALVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVG 941
           IDYNE+FSPVVKHSSIR+LLALVAQ ++EL Q+DVKTAFLHGDLEEEIYMTQP GF+V G
Sbjct: 668 IDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAG 721

BLAST of CmaCh15G011600 vs. NCBI nr
Match: gi|147864012|emb|CAN81130.1| (hypothetical protein VITISV_003944 [Vitis vinifera])

HSP 1 Score: 796.6 bits (2056), Expect = 6.2e-227
Identity = 484/1277 (37.90%), Postives = 705/1277 (55.21%), Query Frame = 1

Query: 18   VEKFDGTNNFGVWRGEVSDLLVMQDLDVSLQEEMPEDMTEAEWTKLNRQACGIIRSCLGK 77
            +EKFDGT+ F  WR ++ D L  + L + L    PE M   EW  L+RQ  G+IR  L +
Sbjct: 11   IEKFDGTD-FAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 70

Query: 78   DQKYPFMKVTMAKELWDKLEAKYMKKSVENKLYLKKKLFRFDYKEGISMAEHLDDFNKII 137
               +  +K     +L   L   Y K S  NK++L  KLF     E  S+A+HL++FN I 
Sbjct: 71   SVAHNVVKEKTTXDLMKALSGMYEKPSANNKVHLMTKLFNLKMAENASVAQHLNEFNTIT 130

Query: 138  TNLLNLDVKIDDEDKALLLLNSLPESYEFLVTTLLH--GITNIDFEDVSNALINNEMRKK 197
              L ++++  DDE +AL++L SLP S+E +   + +  G   + + D+ + ++  E+R++
Sbjct: 131  NQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRR 190

Query: 198  EK-ETYQSSSSNVLTAHGRTSNWKKNECGESRLKSRGRSDNWRKLGKN-ECAYCRQKGHW 257
            +  ET  S S+  L   GR +N   N+ G S  ++  R+ +  + G+  +C  C + GH+
Sbjct: 191  DAGETSGSGSALNLETRGRGNNRNSNQ-GRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHF 250

Query: 258  KKDCSILKEKGS--KSNVVRDDDTDTDDALTISLSVSQTSEWILDSGCSYHMCPNKEMFL 317
            K+ C   K+K     +N V ++     DAL +++  S   +W+LDSG S+H  P++E+  
Sbjct: 251  KRQCKSPKKKNEDDSANAVTEE---VQDALLLAVD-SPLDDWVLDSGASFHTTPHREIIQ 310

Query: 318  DFKEFNGGVVYMGNDSTCKIMGIGSVQIKMFDGVIRKLKDVRYVSDLKKNLISLGVLDAS 377
            ++   + G VY+ + S   ++G+G V+I + +G +  L+ VR++ DL++NLIS+G LD  
Sbjct: 311  NYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDE 370

Query: 378  GYRIILEGGNLKVARGALVAITGTRRGSIYYLNGTTIIGHAAVASSKEQDISKLWHMRLG 437
            G+ I+  GG  KV +GA V   G + G++Y     T      +A +     + LWH RLG
Sbjct: 371  GHAILFVGGTWKVTKGARVLARGKKTGTLYM----TSCPRDTIAVADASTDTSLWHRRLG 430

Query: 438  QAGEK--ETLVNQGVLKGATTGRIDFCEHCIFGKQKNVKFGTAIHQTKGI-LDYVHTDVW 497
               EK  + L+++G L    +   D CE CI GKQK V F       K   L+ VHTD+W
Sbjct: 431  HMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLW 490

Query: 498  GPTKNVSLGGKRWFVTFIDDYSKGVWMYPMRHKNEVLQIFLEWKKMVENQTDKKIKRLRS 557
            GP+   SLGG R+++TFIDD S+ VW+Y +++K +V   F +WK MVE +T  K      
Sbjct: 491  GPSPVASLGGSRYYITFIDDSSRKVWVYFLKNKXDVFXTFKKWKAMVETETGLK------ 550

Query: 558  DNGGEYTYDPFLKVCRDEGIVRHFTVPGKPQQNGVAERMNQTLIEKVRCILSQAGLSKAF 617
                              GI    T+P  PQQNGVAERMN+TL E+ R +   AGL K F
Sbjct: 551  ------------------GIRMXKTIPXTPQQNGVAERMNRTLNERARSMRLHAGLPKTF 610

Query: 618  WAEALSYAVHLVNRLPVSGNGGRTPLEVWSGSPVSDYDKLHVFGCPAYYHVTD---SKLD 677
            WA+A+S   +L+NR P      R   EVWSG  V  +  L VF C +Y H+     SKLD
Sbjct: 611  WADAVSTXAYLINRGPSVPMEFRLXEEVWSGKEVK-FSXLKVFCCVSYVHIDSDARSKLD 670

Query: 678  PRAKKAKFMGFSKGVKGYRLWCPKTSKIVNSRDVTFDESEMFLQKIENNDEALKQVEKVV 737
             ++K   F+G+     GYR W  +  KI+ SR+V F+E  M+  +               
Sbjct: 671  AKSKICFFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDR--------------- 730

Query: 738  FSPDVVAPTEEPIDQVNNNFDVLEQKEQSL------EEQSLVNERVEEPESIAK-NRPRR 797
                 V      IDQ  + F  L++  +S       +++  VN +V+    + +  R  R
Sbjct: 731  ---STVTSDVTEIDQKKSEFVNLDELTESTVQKGGEKDKENVNSQVDLSTPVXEVRRSSR 790

Query: 798  VIRKPARFDDTIAYAFSLIDGVPNSYKDAIQSPDSLHWQEAVNQEIASLEINQTWDLVQL 857
             IR P R+   + Y      G P  Y +A+Q  +S  W+ A+  E+ SL  NQTW+L +L
Sbjct: 791  NIRPPQRYSPVLNYLLLTDGGEPECYBEALQDENSSKWELAMKDEMDSLLGNQTWELTEL 850

Query: 858  PKGKKEIGCKWVFAKKEDPFGI-RYKARLVAKGYTQKEGIDYNEIFSPVVKHSSIRILLA 917
              GKK +  KWV+  K +  G  RYKARLV KG+ QKEGIDY EIFSPVVK S+IR++L 
Sbjct: 851  XVGKKALHNKWVYRIKNEHDGSKRYKARLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLG 910

Query: 918  LVAQFNLELAQLDVKTAFLHGDLEEEIYMTQPVGFRVVGQQHLV---------------- 977
            +VA  NL L QLDVKTAFLHGDLEE++YM QP GF V GQ++LV                
Sbjct: 911  MVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQAPRQ 970

Query: 978  ---EIDKLKDELSKT---------FEMKDLGNAKKILGMEIERDRKKGTVWLTQSQYLRK 1037
               + D     +            F MKDLG AK+ILGM I RD+  GT+ L+QS+Y++K
Sbjct: 971  WYKKFDNFMHRIGFKRCEADHCCYFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVKK 1030

Query: 1038 VLSRFSLNNSTKPVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRP 1097
            VLSRF++N + KPVSTPL  HFKLS    P +++++ +M  +PY +A+G+LMY MVCTRP
Sbjct: 1031 VLSRFNMNEA-KPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYTMVCTRP 1090

Query: 1098 DLSHAVH------------------------SGTIDVGIKFQKQEMFNLDNRVAGFVDSD 1157
            D++HAV                          G++D  + F    +     ++ G+ D+D
Sbjct: 1091 DIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASL-----KLQGYGDAD 1150

Query: 1158 YAGDLDKRRSTTGYLFTMAGGPVCWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLIN 1217
            +  D+D R+STTG++FT++G  + W S LQ  V LSTTE EY+A TE  KE IW+HG ++
Sbjct: 1151 FVSDIDSRKSTTGFVFTLSGTAISWASNLQKIVTLSTTEVEYVAATEVGKEMIWLHGFLD 1210

Query: 1218 DLGISQGHIDVFCDSQSAICLSKNQVHHARTKHIDVRFHFIREIISKGDIRLLKIGTADN 1223
            +LG  Q    +  DSQSAI L+KN   H+++KHI  ++HFIR ++    + L KI  + N
Sbjct: 1211 ELGKKQEMGILHSDSQSAIFLAKNSAFHSKSKHIQTKYHFIRYLVEDKLVILKKICGSKN 1228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
POLX_TOBAC1.0e-18440.21Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME4.2e-6627.68Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
YO22B_YEAST4.7e-2523.26Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YD22B_YEAST6.2e-2523.26Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YB21B_YEAST8.1e-2523.51Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A5BPC1_VITVI4.3e-27542.61Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003191 PE=4 SV=1[more]
Q7XTM9_ORYSJ2.6e-26442.03OSJNBa0033G05.13 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0033G05.13 PE=... [more]
Q94LG0_ORYSJ1.8e-24140.75Putative retroelement pol polyprotein OS=Oryza sativa subsp. japonica GN=LOC_Os0... [more]
A0A151RYL1_CAJCA1.1e-23557.18Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanu... [more]
A5BGX3_VITVI4.3e-22737.90Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003944 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G23160.11.6e-3150.75 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00300.13.5e-1840.18ATMG00300.1 Gag-Pol-related retrotransposon family protein[more]
ATMG00810.14.6e-1832.09ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
ATMG00710.11.6e-1547.19ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
ATMG00820.11.1e-1438.66ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
Match NameE-valueIdentityDescription
gi|147798869|emb|CAN61630.1|6.1e-27542.61hypothetical protein VITISV_003191 [Vitis vinifera][more]
gi|38344889|emb|CAD41912.2|3.7e-26442.03OSJNBa0033G05.13 [Oryza sativa Japonica Group][more]
gi|14029020|gb|AAK52561.1|AC079853_142.6e-24140.75Putative retroelement pol polyprotein [Oryza sativa Japonica Group][more]
gi|1012336336|gb|KYP47640.1|1.6e-23557.18Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus ca... [more]
gi|147864012|emb|CAN81130.1|6.2e-22737.90hypothetical protein VITISV_003944 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR013103RVT_2
IPR025724GAG-pre-integrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G011600.1CmaCh15G011600.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 481..592
score: 1.1
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 473..641
score: 23
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 237..266
score: 4.0
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 229..262
score: 1.3
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 477..633
score: 1.7
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 478..635
score: 1.52
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 830..940
score: 6.4
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 400..464
score: 5.
NoneNo IPR availableunknownCoilCoilcoord: 738..758
scor
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 16..1154
score:
NoneNo IPR availablePANTHERPTHR11439:SF192SUBFAMILY NOT NAMEDcoord: 16..1154
score:
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 60..197
score: 3.6
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 830..986
score: 4.36E-10coord: 1023..1184
score: 4.36

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh15G011600Watermelon (97103) v2cmawmbB288
CmaCh15G011600Watermelon (97103) v2cmawmbB290
CmaCh15G011600Watermelon (97103) v2cmawmbB304
CmaCh15G011600Wax gourdcmawgoB0375
CmaCh15G011600Wax gourdcmawgoB0386
CmaCh15G011600Cucurbita maxima (Rimu)cmacmaB301
CmaCh15G011600Cucurbita maxima (Rimu)cmacmaB312
CmaCh15G011600Cucurbita maxima (Rimu)cmacmaB334
CmaCh15G011600Cucumber (Gy14) v1cgycmaB0710
CmaCh15G011600Cucumber (Gy14) v1cgycmaB0830
CmaCh15G011600Cucumber (Gy14) v1cgycmaB0886
CmaCh15G011600Watermelon (Charleston Gray)cmawcgB264
CmaCh15G011600Cucurbita moschata (Rifu)cmacmoB287
CmaCh15G011600Cucurbita moschata (Rifu)cmacmoB291
CmaCh15G011600Cucurbita moschata (Rifu)cmacmoB298
CmaCh15G011600Cucurbita moschata (Rifu)cmacmoB316
CmaCh15G011600Wild cucumber (PI 183967)cmacpiB303
CmaCh15G011600Wild cucumber (PI 183967)cmacpiB285
CmaCh15G011600Wild cucumber (PI 183967)cmacpiB286
CmaCh15G011600Cucumber (Chinese Long) v2cmacuB281
CmaCh15G011600Cucumber (Chinese Long) v2cmacuB283
CmaCh15G011600Cucumber (Chinese Long) v2cmacuB298
CmaCh15G011600Melon (DHL92) v3.5.1cmameB250
CmaCh15G011600Melon (DHL92) v3.5.1cmameB278
CmaCh15G011600Melon (DHL92) v3.5.1cmameB279
CmaCh15G011600Watermelon (Charleston Gray)cmawcgB246
CmaCh15G011600Watermelon (Charleston Gray)cmawcgB259
CmaCh15G011600Watermelon (97103) v1cmawmB266
CmaCh15G011600Watermelon (97103) v1cmawmB254
CmaCh15G011600Watermelon (97103) v1cmawmB277
CmaCh15G011600Cucurbita pepo (Zucchini)cmacpeB305
CmaCh15G011600Cucurbita pepo (Zucchini)cmacpeB308
CmaCh15G011600Cucurbita pepo (Zucchini)cmacpeB329
CmaCh15G011600Cucurbita pepo (Zucchini)cmacpeB336
CmaCh15G011600Bottle gourd (USVL1VR-Ls)cmalsiB267
CmaCh15G011600Bottle gourd (USVL1VR-Ls)cmalsiB288
CmaCh15G011600Bottle gourd (USVL1VR-Ls)cmalsiB291
CmaCh15G011600Cucumber (Gy14) v2cgybcmaB324
CmaCh15G011600Cucumber (Gy14) v2cgybcmaB325
CmaCh15G011600Cucumber (Gy14) v2cgybcmaB608
CmaCh15G011600Melon (DHL92) v3.6.1cmamedB320
CmaCh15G011600Melon (DHL92) v3.6.1cmamedB284
CmaCh15G011600Melon (DHL92) v3.6.1cmamedB319
CmaCh15G011600Silver-seed gourdcarcmaB1200
CmaCh15G011600Silver-seed gourdcarcmaB1261
CmaCh15G011600Cucumber (Chinese Long) v3cmacucB0331
CmaCh15G011600Cucumber (Chinese Long) v3cmacucB0332
CmaCh15G011600Cucumber (Chinese Long) v3cmacucB0352