CmaCh15G011500 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G011500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Thylakoid lumenal family protein
Location	Cma_Chr15 : 7315280 .. 7318502 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAATCCTATCCAGAAGTCAGAAGGAAACTGATAAATCTAAAACTTTTCCTCTCCAATCGTTTTCTTTCCCCTGTTTCTCCTCTTTTCTCTACTCCTCCAGCAAAATATTGAACTTTCTTGGCGCAGGAAGACCCCAATTGCAGCCCTTCATGGCACTTTCTTCTGTTTCCTCACTATCACTAAAATGTCTACCCTCATCTTCCTCTAAATCAAAGGTTCCGAGTTCTCTACAACCCAGAAAACCATTTTCCATTGTCTCTCAAGTAAACTTACAAAAGGGTCAAACTCAAGGTGAGCATGGTACTCTTCTTCTCCCCCTTGTTTTGATGGCGGCTACTGTCTTCCGTGCTTGTTGTCTTCGCTAACTAGAAGTTCCTTGAAAAGGAAGATTGTTCGGAGAGGAAACACATTGGCAAGATTTCAGAGCCAAAGAGATGGCAAAAGTTGGTTTCAACTGCCTTGGCTGCTGCTGCAGTCATTAGTTTCAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAAGCCGATACGCGTGGCGAATTCGGGATTGGATCCGCTGCTCAATTTGGTTCTGCAGATCTCAGGTCTTTAGGCTTTCAGATAATACTGATCTGTTCCTTTATTGCAAAGTAATTGAACAACACTTGCTTATAATGATAATCCATAAATTTCTTCTATGAACAGAAAAGCAGTGCATGTGAACGAAAATTTCAGGTAGTTTTTCACTTGTCTCGTCATTTCTTTGTGTCATGATGCTTTGATTCTTACAATCCCTGTTCTGAAACTAGTCACAATGGAAGAATTGCAAAGAACGTGTAGTTCAAATTCGGGGGCAAAAGGAATCCTATAAGTGATATATAAATAAAGTGAAGTCATTAGCTCTTTGCTTTGAAATGATAACTTCAGGCGCAATCTATATACTTAATGCCCAGTGCTCATCTTTGAATCTAACGCCTGTACAGGAGAGCCAATTTCACATCTGCTGATATGAGAGAATCAGATTTCAGTGGCTGTACATTCAATGGCGCTTATCTTGAAAAGGCTGTTGCATACAAGACCAATTTCTCAGGTAAGCTTGTTACTAATTATCATAGGAACCTGAATGACAATGAAACCATTAAACATGAGCTGCCAAAACTTTGTATGCCATATAACTTATTCTGTAGATGTATATATAAAATCACAGAGTCAACTATTCTGTTGGTTGGCATTGGATTTAAACGTCCTCTTGCTTTGTCTCCAAGGGCAATGTGGTGCTGCCTTCAAACCCTGCACCACAACCCTATTTTTCATAGGTTCAGGGCCAGTTGCAAGTTCTCCTTGCTTGGATTTCACATGATCAAATTCTCTAAAAAACTTTCCCTCTATACTTCCATCCTCATTCCTAGGTGTCTTCCTCATTGGATCCTCCAAAATTTTATGGTCTTCAGACACATTCCCGTGAGTGATTGGAGCTGCAGAGAAACTCGCAGCACTTGATTTCTTTGCACCTTTGGTTAATGCTTCAACATTCCAATCTCTGTTTTCACCTCTTGAACCATCATTCTTCAAGAATTTTGAGCCATGTTGAATTCTAACTGGGGGAGCACCTATTCCACACCCAGGAGGAAAGCTTCTAACCGCTGAAAGACCTTTCCGGGGTGGATGAAACTTAGGCAATCTATCCGAAACATGTTCCTTTGGAACATTGGCAATCTCATTCTCATCTTCAGAAGGACTTAAAACAGTAAGAGAATCAAGTATTATTGCAGAATCAAGTACTGCATCCTTCATCATGGAAACATGGTAGTTCTCTGGTTCCAACACACTAGAAGTTAATCTATGATTCCTATTACACTCCATCACAAAATCAAGAAGCGAAAAAATCTTTTGTTGCTGGACCTCCATTGAAACCTCCTGAGTTGAAGACTCCATCTAACACCTCTAACCAAAACAAAATCAAAATAACAAAATCTAGAATTACAAGTTAAGCAAAAGAAAACCTATGTTTATACACGCATTACATTCATGGATTCATCAAGAATAGATTACAAAGATTCAGAGAAACAAAATGAAGAGTTAAATGCGCGCGATTTTCAGAACTCTGCTTCGAAATCGAGGAGAAAAAAGTATAAAACATTGATAGGAAGATCCAACCTTCGAGTCCAGAAAAAGTGATTGTCATCCGCTCATCAGGATCAATGTCACTCAGATTTTAGGGTTTGCGGATTCACTTGTTTTATCGCTACTGCTCAGACGATGCGATGAAGCTGTAGGCGGAAAAGAAAAATCTCTCTTTTTCAATTACGAAAAGAAAAAAAAGAGTTTTGATTTATTTATTATTTATTATTTTTAATGCAGAAACATAATAATTAGAAAAAGAAAAAAAAAAAACAAATATCAGTTTAATAAGAAAAATAGAGTGAAAAATAAAGAAAGAACATATGAAAAGAATATTACTCTCTAATTTACAAATTTATTTATTATTATTATTTTGAAACTCAATAATGTGTTGAATTTTTCTTACTATTTCAGGCGCAGATTTGAGTGACACATTGATGGATCGTATGGTAATTATTTCTCAATGTGATTTTAAAATATAATATTTTATATTTATGGAATTAAATTTAATAAAATATGTATTAGTATATTATTTATGGAAATAACTTTTGGAATGGTTAAGGTATTGAATGAAGCAAATCTTACAAATGCGGTGTTGGTTCGATCAGTGCTAACACGGAGCGATTTAGGAGGTGCCACTATCGTGGGTGCTGACTTTAGTGATGCTGTCATCGACCTTCCCCAAAAGCAGGTTTATCTATTAAATATAGTTTAAATGATTAAGACGTATACTTCCAATCTAAAATCGTAATTTTTAGGCACTTTGCAAGTATGCGAGTGGGACGAACCCAGTGACGGGAGTGAGCACGAGGGCAAGCTTAGGGTGTGGAAATAGTCGCAGAAATGCATATGGAACACCGTCATCTCCGCTACTCAGCGCACCGCCGCAACAATTGCTTAATCGTGACGGTTTCTGCGACGAAGGCACTGGTCTTTGTGAAGCCAGTAAATAGATGTATGTATATTTAATAAATCTTGTTTATACTAATCTCAATTTCCCATCTTGTTTTAGTCTTGGTTTAATAAAATCTGACATATTGTAATTTGAAATCATGAAAGTGGGCAGATGGTTCGGTTTTCCACTGATTAACAAATATATATTATAGAGATTACAG

mRNA sequence

TCAAATCCTATCCAGAAGTCAGAAGGAAACTGATAAATCTAAAACTTTTCCTCTCCAATCGTTTTCTTTCCCCTGTTTCTCCTCTTTTCTCTACTCCTCCAGCAAAATATTGAACTTTCTTGGCGCAGGAAGACCCCAATTGCAGCCCTTCATGGCACTTTCTTCTGTTTCCTCACTATCACTAAAATGTCTACCCTCATCTTCCTCTAAATCAAAGGTTCCGAGTTCTCTACAACCCAGAAAACCATTTTCCATTGTCTCTCAAGTAAACTTACAAAAGGGTCAAACTCAAGGTGAGCATGATTGTTCGGAGAGGAAACACATTGGCAAGATTTCAGAGCCAAAGAGATGGCAAAAGTTGGTTTCAACTGCCTTGGCTGCTGCTGCAGTCATTAGTTTCAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAAGCCGATACGCGTGGCGAATTCGGGATTGGATCCGCTGCTCAATTTGGTTCTGCAGATCTCAGAAAAGCAGTGCATGTGAACGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGAGAATCAGATTTCAGTGGCTGTACATTCAATGGCGCTTATCTTGAAAAGGCTGTTGCATACAAGACCAATTTCTCAGGCGCAGATTTGAGTGACACATTGATGGATCGTATGGTATTGAATGAAGCAAATCTTACAAATGCGGTGTTGGTTCGATCAGTGCTAACACGGAGCGATTTAGGAGGTGCCACTATCGTGGGTGCTGACTTTAGTGATGCTGTCATCGACCTTCCCCAAAAGCAGGCACTTTGCAAGTATGCGAGTGGGACGAACCCAGTGACGGGAGTGAGCACGAGGGCAAGCTTAGGGTGTGGAAATAGTCGCAGAAATGCATATGGAACACCGTCATCTCCGCTACTCAGCGCACCGCCGCAACAATTGCTTAATCGTGACGGTTTCTGCGACGAAGGCACTGGTCTTTGTGAAGCCAGTAAATAGATGTATGTATATTTAATAAATCTTGTTTATACTAATCTCAATTTCCCATCTTGTTTTAGTCTTGGTTTAATAAAATCTGACATATTGTAATTTGAAATCATGAAAGTGGGCAGATGGTTCGGTTTTCCACTGATTAACAAATATATATTATAGAGATTACAG

Coding sequence (CDS)

ATGGCACTTTCTTCTGTTTCCTCACTATCACTAAAATGTCTACCCTCATCTTCCTCTAAATCAAAGGTTCCGAGTTCTCTACAACCCAGAAAACCATTTTCCATTGTCTCTCAAGTAAACTTACAAAAGGGTCAAACTCAAGGTGAGCATGATTGTTCGGAGAGGAAACACATTGGCAAGATTTCAGAGCCAAAGAGATGGCAAAAGTTGGTTTCAACTGCCTTGGCTGCTGCTGCAGTCATTAGTTTCAGCTCAGGCATGCCTTCAATTGCTGAACTCAACAAGTATGAAGCCGATACGCGTGGCGAATTCGGGATTGGATCCGCTGCTCAATTTGGTTCTGCAGATCTCAGAAAAGCAGTGCATGTGAACGAAAATTTCAGGAGAGCCAATTTCACATCTGCTGATATGAGAGAATCAGATTTCAGTGGCTGTACATTCAATGGCGCTTATCTTGAAAAGGCTGTTGCATACAAGACCAATTTCTCAGGCGCAGATTTGAGTGACACATTGATGGATCGTATGGTATTGAATGAAGCAAATCTTACAAATGCGGTGTTGGTTCGATCAGTGCTAACACGGAGCGATTTAGGAGGTGCCACTATCGTGGGTGCTGACTTTAGTGATGCTGTCATCGACCTTCCCCAAAAGCAGGCACTTTGCAAGTATGCGAGTGGGACGAACCCAGTGACGGGAGTGAGCACGAGGGCAAGCTTAGGGTGTGGAAATAGTCGCAGAAATGCATATGGAACACCGTCATCTCCGCTACTCAGCGCACCGCCGCAACAATTGCTTAATCGTGACGGTTTCTGCGACGAAGGCACTGGTCTTTGTGAAGCCAGTAAATAG

Protein sequence

MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQGEHDCSERKHIGKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK

Homology

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BLAST of CmaCh15G011500 vs. Swiss-Prot
Match: TL203_ARATH (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.3e-99
Identity = 202/286 (70.63%), Postives = 225/286 (78.67%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSS-------LQPRKPFSIVSQVNLQKGQTQGEHDCS 60
           MA SS+S L +K L  S S S V  S       L  R   S  S + ++      E  CS
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSSNTREGCCS 60

Query: 61  ERKHIGKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFG 120
                   +E   W++++S A+AAA VI+ SSG+P++AELN++EADTRGEFGIGSAAQ+G
Sbjct: 61  S-------AESNTWKRILSAAMAAA-VIASSSGVPAMAELNRFEADTRGEFGIGSAAQYG 120

Query: 121 SADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMD 180
           SADL K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMD
Sbjct: 121 SADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMD 180

Query: 181 RMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGV 240
           RMVLNEANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV
Sbjct: 181 RMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGV 240

Query: 241 STRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE 280
            TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCDE TGLC+
Sbjct: 241 DTRKSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

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BLAST of CmaCh15G011500 vs. Swiss-Prot
Match: RFR32_CYAA5 (Pentapeptide repeat protein Rfr32 OS=Cyanothece sp. (strain ATCC 51142) GN=rfr32 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16
Identity = 53/135 (39.26%), Postives = 73/135 (54.07%), Query Frame = 1


Query: 107 GSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGAD 166
           GS+A +    L       ++   A FT+AD+ +S+FS     GA    +     +  GAD
Sbjct: 44  GSSASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGAD 103

Query: 167 LSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASG 226
           L++ L        A+LTNAVL  +++ R+    A I GADFS AV+D+ +   LC  A G
Sbjct: 104 LTNGLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADG 163

Query: 227 TNPVTGVSTRASLGC 242
            NP TGVSTR SLGC
Sbjct: 164 VNPKTGVSTRESLGC 178

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BLAST of CmaCh15G011500 vs. Swiss-Prot
Match: TL15A_ARATH (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 3.0e-07
Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 1


Query: 129 RANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLV 188
           R +F ++ +R+++F G    GA    A     + S ADL         + + NLTNA L 
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 189 RSVLT-RSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 242
            + +T  +   G+ I GADF+D  +   Q+  LCK A G N  TG +TR +L C
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLC 223

[Close]

BLAST of CmaCh15G011500 vs. Swiss-Prot
Match: YMO3_PANSE (Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = 1


Query: 86  GMPSIAELNKYEADTRGEFGIG---SAAQFGSADLRKAVHVNENFRRANFTSADMRESDF 145
           G+ ++  +N  + D +G +      S A    A+L  A     N   AN T A + E+D 
Sbjct: 65  GVINLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADL 124

Query: 146 SGCTFNGAYLEKAVAYKT-----NFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDL 205
           S    +GA L  A   +T     N SGA+L+   +    L+EA+L+NA L  + L R+DL
Sbjct: 125 SNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADL 184

Query: 206 GGATIVGADFSDAVI---DLP 216
             A + GAD ++A +   DLP
Sbjct: 185 SNANLSGADLTNANLNQTDLP 205

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BLAST of CmaCh15G011500 vs. TrEMBL
Match: A0A0A0KP67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160200 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 4.4e-135
Identity = 254/282 (90.07%), Postives = 267/282 (94.68%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQGEHDCSERKHIGK 60
           MALSS+SSLS+KCLP +SSKS+ P SLQ RK  S+VSQ+N QK QTQ   DCSERKHIGK
Sbjct: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQ---DCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           I+EPKRWQKLVSTALAAAAVI FSSGMPS+AELNKYEADTRGEFGIGSAAQ+GSADLRKA
Sbjct: 61  ITEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VH+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           N TNAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 283
           CGNSRRNAYGTPSSPLLSAPPQQLL+RDGFCD+ TGLCEA+K
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of CmaCh15G011500 vs. TrEMBL
Match: D7TN08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00040 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 3.3e-106
Identity = 212/281 (75.44%), Postives = 237/281 (84.34%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQ-PRKPFSIVSQVNLQKGQTQGEHDCSERKHIG 60
           MALSSVS L +         SK P+ LQ P KPF++V ++ LQ+G            +  
Sbjct: 1   MALSSVSPLYI---------SKSPNHLQSPSKPFTVVCRIELQRGN-----------YCR 60

Query: 61  KISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRK 120
             +E K+WQ+LVSTALAAA V++ S  MP++A+LNKYEA+TRGEFGIGSAAQFGSADLRK
Sbjct: 61  ANAESKKWQRLVSTALAAA-VVTLSPVMPAVADLNKYEAETRGEFGIGSAAQFGSADLRK 120

Query: 121 AVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNE 180
           AVHVNENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NF+GADLSDTLMDRMVLNE
Sbjct: 121 AVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNE 180

Query: 181 ANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASL 240
           ANLTNAVL R+VLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNP+TGVSTRASL
Sbjct: 181 ANLTNAVLARTVLTRSDLGGAVIEGADFSDAVIDLPQKQALCKYASGTNPITGVSTRASL 240

Query: 241 GCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA 281
           GCGNSRR+AYG+PSSPLLSAPP +LL+RDGFCDEGTGLC+A
Sbjct: 241 GCGNSRRSAYGSPSSPLLSAPPPKLLDRDGFCDEGTGLCDA 260

[Close]

BLAST of CmaCh15G011500 vs. TrEMBL
Match: B9GVQ7_POPTR (Thylakoid lumenal family protein OS=Populus trichocarpa GN=POPTR_0003s11240g PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.8e-105
Identity = 203/280 (72.50%), Postives = 239/280 (85.36%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQGEHDCSERKHIGK 60
           MA +S+SS+S+K  P+ S+  ++   L   KPF I  Q++ ++G      DCS+  +  +
Sbjct: 1   MAFTSISSMSIKS-PNISTPHRI---LSLSKPFRIAYQLDTERGNQFA--DCSKNGYEVE 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
            ++ K W ++VST L AAA+   S  +P++A+LN++EA+TRGEFGIGSAAQFGSADLRKA
Sbjct: 61  TAKAKNWARVVSTTLVAAAISFSSCNLPAVADLNRFEAETRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VH+NENFRRANFT+ADMRESDFSG TFNGAYLEKAVAYK NF+GADLSDTLMDRMVLNE+
Sbjct: 121 VHLNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNES 180

Query: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNP+TGVSTRASLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGALIAGADFSDAVIDLPQKQALCKYASGTNPITGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA 281
           CGNSRRNAYGTPSSPLLSAPPQ+LL+RDGFCD+GTGLC+A
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQKLLDRDGFCDQGTGLCDA 274

[Close]

BLAST of CmaCh15G011500 vs. TrEMBL
Match: V4TUN7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021545mg PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 6.2e-105
Identity = 210/282 (74.47%), Postives = 236/282 (83.69%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQP-RKPFSIVSQVNLQKGQTQGEH-DCSERKHI 60
           MALSS+S LS+K L   SS SK P  L    KP  +  Q++  K +++G+  DCS  +  
Sbjct: 1   MALSSISPLSIKSLNFCSSSSKGPYQLHALSKPLWVACQIS-SKTESEGQFPDCSNNQCA 60

Query: 61  GKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLR 120
           G  ++ K W+  VSTALAAA V S SS + ++A+LNKYEA+TRGEFGIGSAAQFGSADLR
Sbjct: 61  GPYAKLKNWRVFVSTALAAAVVASCSSNISALADLNKYEAETRGEFGIGSAAQFGSADLR 120

Query: 121 KAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180
           KAVHV ENFRRANFTSADMRESDFSG  FNGAYLEKAVAYK NF+GADLSDTLMDRMVLN
Sbjct: 121 KAVHVKENFRRANFTSADMRESDFSGSKFNGAYLEKAVAYKANFTGADLSDTLMDRMVLN 180

Query: 181 EANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240
           EANLTNAVLVR+VLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGVSTR S
Sbjct: 181 EANLTNAVLVRTVLTRSDLGGAIIEGADFSDAVIDLAQKQALCKYANGTNPITGVSTRKS 240

Query: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA 281
           LGCGNSRRNAYG+PSSPLLSAPPQ+LL+RDGFCD GTGLC+A
Sbjct: 241 LGCGNSRRNAYGSPSSPLLSAPPQKLLDRDGFCDSGTGLCDA 281

[Close]

BLAST of CmaCh15G011500 vs. TrEMBL
Match: A0A067JP03_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20783 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 8.2e-105
Identity = 210/280 (75.00%), Postives = 236/280 (84.29%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQGEHDCSERKHIGK 60
           MAL+S+S LS+K L   SS +K P  L P KPF IV Q+  Q+       DCS+ +    
Sbjct: 1   MALTSLSPLSIKSLKIYSSSTKSPYHL-PSKPFKIVCQLETQREDLF--LDCSKIRSKVN 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
            S+   W+ LVSTALA A V+SFSS +P+ A+LNK+EA+ RGEFGIGSAAQFGSADLRKA
Sbjct: 61  SSKSSNWRTLVSTALAVA-VVSFSSNLPAFADLNKFEAELRGEFGIGSAAQFGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VHVNENFRRANFT+ADMRESDFSG TFNGAYLEKAVAYK NF+GADLSDTLMDRMVLNEA
Sbjct: 121 VHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           NLTNAVLVRSVLTRSDLGGA I GADFSDAV+DLPQKQALCKYA+GTNPVTGVSTR SLG
Sbjct: 181 NLTNAVLVRSVLTRSDLGGAIIQGADFSDAVLDLPQKQALCKYANGTNPVTGVSTRRSLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA 281
           CGNS+RNAYG+PSSPLLS PPQ+LL+RDGFCDE +GLC+A
Sbjct: 241 CGNSKRNAYGSPSSPLLSTPPQKLLDRDGFCDEQSGLCDA 276

[Close]

BLAST of CmaCh15G011500 vs. TAIR10
Match: AT1G12250.1 (AT1G12250.1 Pentapeptide repeat-containing protein)

HSP 1 Score: 362.8 bits (930), Expect = 1.9e-100
Identity = 202/286 (70.63%), Postives = 225/286 (78.67%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSS-------LQPRKPFSIVSQVNLQKGQTQGEHDCS 60
           MA SS+S L +K L  S S S V  S       L  R   S  S + ++      E  CS
Sbjct: 1   MAFSSLSPLPMKSLDISRSSSSVSRSPYHFQRYLLRRLQLSSRSNLEIKDSSNTREGCCS 60

Query: 61  ERKHIGKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFG 120
                   +E   W++++S A+AAA VI+ SSG+P++AELN++EADTRGEFGIGSAAQ+G
Sbjct: 61  S-------AESNTWKRILSAAMAAA-VIASSSGVPAMAELNRFEADTRGEFGIGSAAQYG 120

Query: 121 SADLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMD 180
           SADL K VH NENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NFSGADLSDTLMD
Sbjct: 121 SADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMD 180

Query: 181 RMVLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGV 240
           RMVLNEANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDL QKQALCKYA+GTNP+TGV
Sbjct: 181 RMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGV 240

Query: 241 STRASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE 280
            TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCDE TGLC+
Sbjct: 241 DTRKSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of CmaCh15G011500 vs. TAIR10
Match: AT2G44920.2 (AT2G44920.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 1


Query: 129 RANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEANLTNAVLV 188
           R +F ++ +R+++F G    GA    A     + S ADL         + + NLTNA L 
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 189 RSVLT-RSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLGC 242
            + +T  +   G+ I GADF+D  +   Q+  LCK A G N  TG +TR +L C
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLC 223

[Close]

BLAST of CmaCh15G011500 vs. NCBI nr
Match: gi|659073564|ref|XP_008437129.1| (PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic [Cucumis melo])

HSP 1 Score: 490.7 bits (1262), Expect = 1.7e-135
Identity = 258/284 (90.85%), Postives = 268/284 (94.37%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQGEHDCSERKH--I 60
           MALSS+SSLS KCLP +SSKSK PSSLQPRK  S VSQ+N QK QTQ   DCSERKH  I
Sbjct: 1   MALSSISSLSAKCLPLNSSKSKHPSSLQPRKRISTVSQINPQKDQTQ---DCSERKHAHI 60

Query: 61  GKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLR 120
           GKI+EPKRWQKLVSTALAAAAVI FSSGMPS+AELNKYEADTRGEFGIGSAAQ+GSADLR
Sbjct: 61  GKITEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLR 120

Query: 121 KAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180
           KAVH+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN
Sbjct: 121 KAVHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLN 180

Query: 181 EANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240
           EAN TNAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS
Sbjct: 181 EANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRAS 240

Query: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 283
           LGCGNSRRNAYGTPSSPLLSAPPQQLL+RDGFCD+GTGLCEA+K
Sbjct: 241 LGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of CmaCh15G011500 vs. NCBI nr
Match: gi|449459702|ref|XP_004147585.1| (PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic [Cucumis sativus])

HSP 1 Score: 488.8 bits (1257), Expect = 6.4e-135
Identity = 254/282 (90.07%), Postives = 267/282 (94.68%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQPRKPFSIVSQVNLQKGQTQGEHDCSERKHIGK 60
           MALSS+SSLS+KCLP +SSKS+ P SLQ RK  S+VSQ+N QK QTQ   DCSERKHIGK
Sbjct: 1   MALSSISSLSVKCLPLNSSKSRHPCSLQTRKQISMVSQINPQKDQTQ---DCSERKHIGK 60

Query: 61  ISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRKA 120
           I+EPKRWQKLVSTALAAAAVI FSSGMPS+AELNKYEADTRGEFGIGSAAQ+GSADLRKA
Sbjct: 61  ITEPKRWQKLVSTALAAAAVIGFSSGMPSVAELNKYEADTRGEFGIGSAAQYGSADLRKA 120

Query: 121 VHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180
           VH+NENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA
Sbjct: 121 VHINENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNEA 180

Query: 181 NLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240
           N TNAVLVRSVLTRSDLGGA IVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG
Sbjct: 181 NFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASLG 240

Query: 241 CGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEASK 283
           CGNSRRNAYGTPSSPLLSAPPQQLL+RDGFCD+ TGLCEA+K
Sbjct: 241 CGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of CmaCh15G011500 vs. NCBI nr
Match: gi|645266455|ref|XP_008238619.1| (PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X2 [Prunus mume])

HSP 1 Score: 397.9 bits (1021), Expect = 1.5e-107
Identity = 215/282 (76.24%), Postives = 242/282 (85.82%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPS-SLQP--RKPFSIVSQVNLQKGQTQGEHDCSERKH 60
           MAL+ +SSLS+K L +SS   K P   LQ    KPFS+V Q++ ++      HDCS ++ 
Sbjct: 1   MALTFISSLSIKSLATSSPNPKAPPIRLQSLSNKPFSLVCQLDPERHHF---HDCSSKQC 60

Query: 61  IGKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADL 120
                + K+W+ +VS A+AAA VISFSSGMP+IA+LNK+EADT GEFGIGSAAQFGSADL
Sbjct: 61  KTVNEDSKKWRSIVSAAMAAA-VISFSSGMPAIADLNKFEADTPGEFGIGSAAQFGSADL 120

Query: 121 RKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVL 180
           RKAVHVNENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NF+GADLSDTLMDRMVL
Sbjct: 121 RKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFAGADLSDTLMDRMVL 180

Query: 181 NEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRA 240
           N+ANL +AVLVRSVLTRSDLGGA I GADFSDAV+DLPQKQALCKYASGTNP TGVSTRA
Sbjct: 181 NDANLKDAVLVRSVLTRSDLGGALIEGADFSDAVLDLPQKQALCKYASGTNPTTGVSTRA 240

Query: 241 SLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCE 280
           SLGCGNSRRNAYGTPSSPLLSAPPQ+LL+RDGFCD+GTGLC+
Sbjct: 241 SLGCGNSRRNAYGTPSSPLLSAPPQRLLDRDGFCDQGTGLCD 278

[Close]

BLAST of CmaCh15G011500 vs. NCBI nr
Match: gi|731380111|ref|XP_010662236.1| (PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X1 [Vitis vinifera])

HSP 1 Score: 393.3 bits (1009), Expect = 3.6e-106
Identity = 214/285 (75.09%), Postives = 241/285 (84.56%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQ-PRKPFSIVSQVNLQKGQTQGEHD----CSER 60
           MALSSVS L +         SK P+ LQ P KPF++V ++ LQ+G      +    C E+
Sbjct: 1   MALSSVSPLYI---------SKSPNHLQSPSKPFTVVCRIELQRGNYCRVLNLLKLCFEK 60

Query: 61  KHIGKISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSA 120
           +     +E K+WQ+LVSTALAAA V++ S  MP++A+LNKYEA+TRGEFGIGSAAQFGSA
Sbjct: 61  REAN--AESKKWQRLVSTALAAA-VVTLSPVMPAVADLNKYEAETRGEFGIGSAAQFGSA 120

Query: 121 DLRKAVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRM 180
           DLRKAVHVNENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NF+GADLSDTLMDRM
Sbjct: 121 DLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRM 180

Query: 181 VLNEANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVST 240
           VLNEANLTNAVL R+VLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNP+TGVST
Sbjct: 181 VLNEANLTNAVLARTVLTRSDLGGAVIEGADFSDAVIDLPQKQALCKYASGTNPITGVST 240

Query: 241 RASLGCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA 281
           RASLGCGNSRR+AYG+PSSPLLSAPP +LL+RDGFCDEGTGLC+A
Sbjct: 241 RASLGCGNSRRSAYGSPSSPLLSAPPPKLLDRDGFCDEGTGLCDA 273

[Close]

BLAST of CmaCh15G011500 vs. NCBI nr
Match: gi|731380114|ref|XP_010662240.1| (PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X2 [Vitis vinifera])

HSP 1 Score: 392.9 bits (1008), Expect = 4.8e-106
Identity = 212/281 (75.44%), Postives = 237/281 (84.34%), Query Frame = 1


Query: 1   MALSSVSSLSLKCLPSSSSKSKVPSSLQ-PRKPFSIVSQVNLQKGQTQGEHDCSERKHIG 60
           MALSSVS L +         SK P+ LQ P KPF++V ++ LQ+G            +  
Sbjct: 1   MALSSVSPLYI---------SKSPNHLQSPSKPFTVVCRIELQRGN-----------YCR 60

Query: 61  KISEPKRWQKLVSTALAAAAVISFSSGMPSIAELNKYEADTRGEFGIGSAAQFGSADLRK 120
             +E K+WQ+LVSTALAAA V++ S  MP++A+LNKYEA+TRGEFGIGSAAQFGSADLRK
Sbjct: 61  ANAESKKWQRLVSTALAAA-VVTLSPVMPAVADLNKYEAETRGEFGIGSAAQFGSADLRK 120

Query: 121 AVHVNENFRRANFTSADMRESDFSGCTFNGAYLEKAVAYKTNFSGADLSDTLMDRMVLNE 180
           AVHVNENFRRANFTSADMRESDFSG TFNGAYLEKAVAYK NF+GADLSDTLMDRMVLNE
Sbjct: 121 AVHVNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNE 180

Query: 181 ANLTNAVLVRSVLTRSDLGGATIVGADFSDAVIDLPQKQALCKYASGTNPVTGVSTRASL 240
           ANLTNAVL R+VLTRSDLGGA I GADFSDAVIDLPQKQALCKYASGTNP+TGVSTRASL
Sbjct: 181 ANLTNAVLARTVLTRSDLGGAVIEGADFSDAVIDLPQKQALCKYASGTNPITGVSTRASL 240

Query: 241 GCGNSRRNAYGTPSSPLLSAPPQQLLNRDGFCDEGTGLCEA 281
           GCGNSRR+AYG+PSSPLLSAPP +LL+RDGFCDEGTGLC+A
Sbjct: 241 GCGNSRRSAYGSPSSPLLSAPPPKLLDRDGFCDEGTGLCDA 260

The following BLAST results are available for this feature:

BLAST of CmaCh15G011500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TL203_ARATH	3.3e-99	70.63	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20....	[more]
RFR32_CYAA5	1.6e-16	39.26	Pentapeptide repeat protein Rfr32 OS=Cyanothece sp. (strain ATCC 51142) GN=rfr32...	[more]
TL15A_ARATH	3.0e-07	34.21	Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana GN=At2...	[more]
YMO3_PANSE	1.1e-06	32.62	Uncharacterized protein in mobD 3'region OS=Pantoea stewartii subsp. stewartii P...	[more]

BLAST of CmaCh15G011500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP67_CUCSA	4.4e-135	90.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G160200 PE=4 SV=1	[more]
D7TN08_VITVI	3.3e-106	75.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0154g00040 PE=4 SV=...	[more]
B9GVQ7_POPTR	4.8e-105	72.50	Thylakoid lumenal family protein OS=Populus trichocarpa GN=POPTR_0003s11240g PE=...	[more]
V4TUN7_9ROSI	6.2e-105	74.47	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021545mg PE=4 SV=1	[more]
A0A067JP03_JATCU	8.2e-105	75.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20783 PE=4 SV=1	[more]

BLAST of CmaCh15G011500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12250.1	1.9e-100	70.63	Pentapeptide repeat-containing protein	[more]
AT2G44920.2	1.7e-08	34.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CmaCh15G011500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073564\|ref\|XP_008437129.1\|	1.7e-135	90.85	PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic [Cucumis melo]	[more]
gi\|449459702\|ref\|XP_004147585.1\|	6.4e-135	90.07	PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic [Cucumis sativus]	[more]
gi\|645266455\|ref\|XP_008238619.1\|	1.5e-107	76.24	PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X2 [Prunus...	[more]
gi\|731380111\|ref\|XP_010662236.1\|	3.6e-106	75.09	PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X1 [Vitis ...	[more]
gi\|731380114\|ref\|XP_010662240.1\|	4.8e-106	75.44	PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic isoform X2 [Vitis ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001646	5peptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G011500.1	CmaCh15G011500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 135..171 score: 4.7E-9coord: 177..210 score: 9.
None	No IPR available	PANTHER	PTHR14136	UNCHARACTERIZED	coord: 61..281 score: 1.3
None	No IPR available	PANTHER	PTHR14136:SF3	SUBFAMILY NOT NAMED	coord: 61..281 score: 1.3
None	No IPR available	unknown	SSF141571	Pentapeptide repeat-like	coord: 111..211 score: 5.23

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G011500	Cucsa.302110	Cucumber (Gy14) v1	cgycmaB0830
CmaCh15G011500	Cla011555	Watermelon (97103) v1	cmawmB277
CmaCh15G011500	Csa5G160200	Cucumber (Chinese Long) v2	cmacuB298
CmaCh15G011500	MELO3C005562	Melon (DHL92) v3.5.1	cmameB250
CmaCh15G011500	ClCG01G003790	Watermelon (Charleston Gray)	cmawcgB259
CmaCh15G011500	CSPI05G06530	Wild cucumber (PI 183967)	cmacpiB303
CmaCh15G011500	CmoCh15G012100	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G011500	MELO3C005562.2	Melon (DHL92) v3.6.1	cmamedB284
CmaCh15G011500	CsaV3_5G003940	Cucumber (Chinese Long) v3	cmacucB0352
CmaCh15G011500	Cla97C01G003940	Watermelon (97103) v2	cmawmbB288
CmaCh15G011500	Bhi12G000379	Wax gourd	cmawgoB0375

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G011500	Melon (DHL92) v3.6.1	cmamedB320
CmaCh15G011500	Melon (DHL92) v3.6.1	cmamedB319
CmaCh15G011500	Silver-seed gourd	carcmaB0245
CmaCh15G011500	Silver-seed gourd	carcmaB1200
CmaCh15G011500	Silver-seed gourd	carcmaB1261
CmaCh15G011500	Cucumber (Chinese Long) v3	cmacucB0331
CmaCh15G011500	Cucumber (Chinese Long) v3	cmacucB0332
CmaCh15G011500	Watermelon (97103) v2	cmawmbB290
CmaCh15G011500	Watermelon (97103) v2	cmawmbB304
CmaCh15G011500	Wax gourd	cmawgoB0386
CmaCh15G011500	Cucurbita maxima (Rimu)	cmacmaB301
CmaCh15G011500	Cucurbita maxima (Rimu)	cmacmaB334
CmaCh15G011500	Cucumber (Gy14) v1	cgycmaB0710
CmaCh15G011500	Cucumber (Gy14) v1	cgycmaB0886
CmaCh15G011500	Watermelon (Charleston Gray)	cmawcgB264
CmaCh15G011500	Cucurbita moschata (Rifu)	cmacmoB291
CmaCh15G011500	Cucurbita moschata (Rifu)	cmacmoB298
CmaCh15G011500	Cucurbita moschata (Rifu)	cmacmoB316
CmaCh15G011500	Wild cucumber (PI 183967)	cmacpiB285
CmaCh15G011500	Wild cucumber (PI 183967)	cmacpiB286
CmaCh15G011500	Cucumber (Chinese Long) v2	cmacuB281
CmaCh15G011500	Cucumber (Chinese Long) v2	cmacuB283
CmaCh15G011500	Melon (DHL92) v3.5.1	cmameB278
CmaCh15G011500	Melon (DHL92) v3.5.1	cmameB279
CmaCh15G011500	Watermelon (Charleston Gray)	cmawcgB246
CmaCh15G011500	Watermelon (97103) v1	cmawmB266
CmaCh15G011500	Watermelon (97103) v1	cmawmB254
CmaCh15G011500	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G011500	Cucurbita pepo (Zucchini)	cmacpeB308
CmaCh15G011500	Cucurbita pepo (Zucchini)	cmacpeB329
CmaCh15G011500	Cucurbita pepo (Zucchini)	cmacpeB336
CmaCh15G011500	Bottle gourd (USVL1VR-Ls)	cmalsiB267
CmaCh15G011500	Bottle gourd (USVL1VR-Ls)	cmalsiB288
CmaCh15G011500	Bottle gourd (USVL1VR-Ls)	cmalsiB291
CmaCh15G011500	Cucumber (Gy14) v2	cgybcmaB324
CmaCh15G011500	Cucumber (Gy14) v2	cgybcmaB325
CmaCh15G011500	Cucumber (Gy14) v2	cgybcmaB608