CmaCh15G010740 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G010740
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pectin lyase superfamily protein
Location	Cma_Chr15 : 6834580 .. 6837325 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGACCGAGGACCTCGTCATTTGTCGCCTCACTTGTATCTCACCAGATTCCGCAGGTATCGCCCTTGGTAGTGAAATGTCCGGCGGAATTCGCAACGTTAGGATTGAAAACGTCACTGCAATCAACAAAGAATCTGCTGTCAGAATCAGAACCGCTCGCAGACGAGGCGGCTTCGTCAAGGACATTTTCGTCCGAAGAATGTTTCTATCCACGATGAAATATGTCTTCTGGATTGCTGGAGACTATAAAGATCATGCGGATGATAAGTTTGATCCCTCGGTGTTGCCAGAGATTAAGGACATTAATTACAGAGACGTGGTGGCCGAGAATGTTACAATGTCGGCAAATTTGGTGGAAATTTCGCGAGATCCATTCACGTACATATGTGTTTCGAATGTGAAGATTGAATTGTCGAAGAAGCCTAAAAAGTTGCAGTGGAACTGTATGGAAATTGTAGGATTTAGTAGCGACGTGGAACCGCCGCCATGTGCTCCATTGGCTAAGGCAGCAAAAACTGGTGGATGTGACTTTTGTGCTTATCATCTCCCAATTGAGAATGTTCTATTGAAGTCATGCTTGTTCTAGTAAAGGTTTTTTCTTTATAAAATGTTTTTACTAAGTTGTTGGAAGAAAATAAAAATGCTAAAAAATAAGAGAGAGAGAGAGAAAATTGCTGAAGACTTTTGCAATCAGGTGATCCATTGGACGTGTTTGTCAAATGGTCAAAGAAATGTGTAAAAGCTAAAACCTGTGGTATGTCTTCTAGAATTTTGTCAAATGGTCAAAGAAACGTGTAAAAGCTAAAACTTATTCGAGCTGGCCGCCCCAGGTGGTGGACCTCATGTTTTATCTAACAATCTTCTCCTAAAACTTGTGGTATGTCCTCCAGACTCCACCTTCTTTTTCGAGCTGGCGCCAGTCTAGGTGAAGACTTCACCTTTTACCTAAGTTGTTGGAAGAAAATAAAAATGGGAAAAAATAACAGAGAGAGAGCGAGAGAATTGCTGAAAACTTTTGTTTAAAATGAGGTGATCCATGTGTTTGTCAGAAATGTGTAAAAGCTAAAACCTGTGGTATGTCGTCCAGACATTTGTCAAATGGTCAATGAAACGTGTAAAAGCTAAAACTTATTCGAGTTGGCCGCCCCAGGTGGTGGACCTCAGGTTTTATCTAACAATTTCCTCCTAAAACCTATGGTATGTCCTCCAGACTCCACCTTCTTCTTCGAGCTGGCCGCTAGTCAAGGTGGTTCACCTCTTCGTAATAGATCTTCTATCCTCCAGTACTATCCTCTGGTACCTGGCCGAGAGACTGATTGGTTGCTTTATCTCCAACTCTAGGATGTAAAGGCGGTGTGTGGTTCACCTCTTCCTAATAGATCTTCCATCCTCCAGTACCTTCCCGAGAGGCTGACTGGTTGCTCTACCTCCAACTCTTGGATGTAAAGGCGGTTTGTCGTGCACCGAACTTGCGTGAGCAACTGTCGTCGATCATCGTGGATCCTAAGTAACCCACGCTTGATGGAAATGTGGCAGCCGGTCTCATTGAGTTGACGGTACAACAGCCTCATCTTTGGAACTAATCTTACTGATGTGGCAGGTGATTATTTCTTTTTCTTTACCTTTTTAACATTTCTTTTCTTAAAAAAATGGTTAGCAAAATTAGAGAGAAATAAAATTGGATTGTTGACATGGTATAGATAACAACAACAGATCGACAGACAGGGGTCTTATTGGTGGGATAAGTTTCACAAAGGGGAGCTCAACATAACACGACCATACATGATCGAGATTATGTACTCTCAAATTCAAATTTCAGATCTCACTTTGATCAACTCTCCTTCTTAGTTCGTCCATAACGTGTATAGCAGTTTTGACTCTTTCACTCTCTCACAAAATTAAAATTTGAATAGTATTTGATTCAAATTTTTACTCTATATTTTGATAATATATCTCTATCTATATCTATATATATATATACTTATTTATTTATTTTAATTTGGTTCGGTGAAAAGCAGGAATGTGATTATCGAAGGGCTCACCATCTTGGCTCCAATCACCGTACCCAACACCGACGGAATCGATCCAGGTTCCCTCATCTTCACCTTTCAAATCTTAGGGCTTCTTTTTTTTTCTTCATCATCCCTCTACCTAATTCTCCATTCAATTTCACAGATTCCTATTCCAACACTTGAATCGAAGACTGTTACATCGTTTCCGGTGACGATTGCATTGCCATCAAGAGTGGATGGGATGAATACAGTATCAAATTCAGAATGCCGACCGAGGACCTCGTTATTCGCCGCCTCACTTGCATCTCACCAAATTCCGCAGGTATCGCCCTTGGTAGTGAAATGTCTGGTGGAATTCGCAACGTCAGAATCGAAAATGTCACTGCAATCAACATAGAGTCTGCTGTTAGAATTAAAATTGCTCGCAGACGAGGCGGCTTCGTCAAGGACATTTTCGTCCAAAGAATGTTTCTATCCACGATCAAATACGTCTTCTAGATTGCTGGAGACTACAAAGATCATGCAGATGATAAGTTCGATCCCTCGGCATTACCAGAGATTAAGAACATTAATTACAGAAACGTGGTAGCCGAGAATGTTACAATGTCGGCAAATTTGGCAAAGATTTCGGGAGATCCGTTCATGAATATATGTGTTTCAAATGTGAAGATTGAATTGTCAAAGAAGCCTAAAAAATTGCAATGGAACTATACAAAAATAAGAATGTTGTAA

mRNA sequence

ATGCCGACCGAGGACCTCGTCATTTGTCGCCTCACTTGTATCTCACCAGATTCCGCAGGTATCGCCCTTGGTAGTGAAATGTCCGGCGGAATTCGCAACGTTAGGATTGAAAACGTCACTGCAATCAACAAAGAATCTGCTGTCAGAATCAGAACCGCTCGCAGACGAGGCGGCTTCGTCAAGGACATTTTCGTCCGAAGAATGTTTCTATCCACGATGAAATATGTCTTCTGGATTGCTGGAGACTATAAAGATCATGCGGATGATAAGTTTGATCCCTCGGTGTTGCCAGAGATTAAGGACATTAATTACAGAGACGTGGTGGCCGAGAATGTTACAATGTCGGCAAATTTGGTGGAAATTTCGCGAGATCCATTCACGTACATATGTGTTTCGAATGTGAAGATTGAATTGTCGAAGAAGCCTAAAAAGTTGCAGTGGAACTGTATGGAAATTGTAGGATTTAGTAGCGACGTGGAACCGCCGCCATGTGCTCCATTGGCTAAGGCAGCAAAAACTGGTGGATGTGACTTTTGTGCTTATCATCTCCCAATTGAGAATATCGACAGACAGGGGTCTTATTGGTGGGATAAGTTTCACAAAGGGGAGCTCAACATAACACGACCATACATGATCGAGATTATGTACTCTCAAATTCAAATTTCAGATCTCACTTTGATCAACTCTCCTTCTTACAGGAATGTGATTATCGAAGGGCTCACCATCTTGGCTCCAATCACCGTACCCAACACCGACGGAATCGATCCAGACTGTTACATCGTTTCCGGTGACGATTGCATTGCCATCAAGAGTGGATGGGATGAATACAGTATCAAATTCAGAATGCCGACCGAGGACCTCGTTATTCGCCGCCTCACTTGCATCTCACCAAATTCCGCAGGTATCGCCCTTGGTAGTGAAATGTCTGGTGGAATTCGCAACGTCAGAATCGAAAATGTCACTGCAATCAACATAGAGTCTGCTGTTAGAATTAAAATTGCTCGCAGACGAGGCGGCTTCGTCAAGGACATTTTCGTCCAAAGAATGTTTCTATCCACGATCAAATACATTGCTGGAGACTACAAAGATCATGCAGATGATAAGTTCGATCCCTCGGCATTACCAGAGATTAAGAACATTAATTACAGAAACGTGGTAGCCGAGAATGTTACAATGTCGGCAAATTTGGCAAAGATTTCGGGAGATCCGTTCATGAATATATGTGTTTCAAATGTGAAGATTGAATTGTCAAAGAAGCCTAAAAAATTGCAATGGAACTATACAAAAATAAGAATGTTGTAA

Coding sequence (CDS)

ATGCCGACCGAGGACCTCGTCATTTGTCGCCTCACTTGTATCTCACCAGATTCCGCAGGTATCGCCCTTGGTAGTGAAATGTCCGGCGGAATTCGCAACGTTAGGATTGAAAACGTCACTGCAATCAACAAAGAATCTGCTGTCAGAATCAGAACCGCTCGCAGACGAGGCGGCTTCGTCAAGGACATTTTCGTCCGAAGAATGTTTCTATCCACGATGAAATATGTCTTCTGGATTGCTGGAGACTATAAAGATCATGCGGATGATAAGTTTGATCCCTCGGTGTTGCCAGAGATTAAGGACATTAATTACAGAGACGTGGTGGCCGAGAATGTTACAATGTCGGCAAATTTGGTGGAAATTTCGCGAGATCCATTCACGTACATATGTGTTTCGAATGTGAAGATTGAATTGTCGAAGAAGCCTAAAAAGTTGCAGTGGAACTGTATGGAAATTGTAGGATTTAGTAGCGACGTGGAACCGCCGCCATGTGCTCCATTGGCTAAGGCAGCAAAAACTGGTGGATGTGACTTTTGTGCTTATCATCTCCCAATTGAGAATATCGACAGACAGGGGTCTTATTGGTGGGATAAGTTTCACAAAGGGGAGCTCAACATAACACGACCATACATGATCGAGATTATGTACTCTCAAATTCAAATTTCAGATCTCACTTTGATCAACTCTCCTTCTTACAGGAATGTGATTATCGAAGGGCTCACCATCTTGGCTCCAATCACCGTACCCAACACCGACGGAATCGATCCAGACTGTTACATCGTTTCCGGTGACGATTGCATTGCCATCAAGAGTGGATGGGATGAATACAGTATCAAATTCAGAATGCCGACCGAGGACCTCGTTATTCGCCGCCTCACTTGCATCTCACCAAATTCCGCAGGTATCGCCCTTGGTAGTGAAATGTCTGGTGGAATTCGCAACGTCAGAATCGAAAATGTCACTGCAATCAACATAGAGTCTGCTGTTAGAATTAAAATTGCTCGCAGACGAGGCGGCTTCGTCAAGGACATTTTCGTCCAAAGAATGTTTCTATCCACGATCAAATACATTGCTGGAGACTACAAAGATCATGCAGATGATAAGTTCGATCCCTCGGCATTACCAGAGATTAAGAACATTAATTACAGAAACGTGGTAGCCGAGAATGTTACAATGTCGGCAAATTTGGCAAAGATTTCGGGAGATCCGTTCATGAATATATGTGTTTCAAATGTGAAGATTGAATTGTCAAAGAAGCCTAAAAAATTGCAATGGAACTATACAAAAATAAGAATGTTGTAA

Protein sequence

MPTEDLVICRLTCISPDSAGIALGSEMSGGIRNVRIENVTAINKESAVRIRTARRRGGFVKDIFVRRMFLSTMKYVFWIAGDYKDHADDKFDPSVLPEIKDINYRDVVAENVTMSANLVEISRDPFTYICVSNVKIELSKKPKKLQWNCMEIVGFSSDVEPPPCAPLAKAAKTGGCDFCAYHLPIENIDRQGSYWWDKFHKGELNITRPYMIEIMYSQIQISDLTLINSPSYRNVIIEGLTILAPITVPNTDGIDPDCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIRRLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMFLSTIKYIAGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNICVSNVKIELSKKPKKLQWNYTKIRML

Homology

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BLAST of CmaCh15G010740 vs. Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.1e-81
Identity = 152/263 (57.79%), Postives = 193/263 (73.38%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QG  WW +FH G+L  TRPY+IE+MYS  IQIS+LTL+NSPS+       RN++I+G
Sbjct: 178 IDGQGGLWWQRFHGGKLKYTRPYLIELMYSADIQISNLTLLNSPSWNVHPVYSRNILIQG 237

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           +TILAP+  PNTDGI+P         DCYIVSGDDC+A+KSGWDEY I + MPT+ LVIR
Sbjct: 238 ITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIR 297

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP SA IALGSEMSGGI++VR E++ AIN ES +RIK    RGG+VKDI+V+ M 
Sbjct: 298 RLTCISPYSAVIALGSEMSGGIQDVRAEDIVAINSESGIRIKTGIGRGGYVKDIYVRGMT 357

Query: 368 LSTIK---YIAGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           + T+K   ++ G+Y  HAD+ +DP A P I+ INYR++VAENV+M+A L  I  DPF  I
Sbjct: 358 MKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVSMAARLEGIPSDPFTGI 417

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I L+ K KK+ W  T +
Sbjct: 418 CISNVTIHLAAKAKKVPWTCTDV 440

[Close]

BLAST of CmaCh15G010740 vs. Swiss-Prot
Match: PGLR3_ARATH (Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.8e-11
Identity = 68/228 (29.82%), Postives = 103/228 (45.18%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMY-SQIQISDLTLINSP-------SYRNVIIEG 247
           I+ QGS WW+  HKG    +RP  ++    + +++S LT ++SP           V I  
Sbjct: 123 INGQGSSWWE--HKG----SRPTALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISS 182

Query: 248 LTILAPITVPNTDGID---------PDCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           L I AP + PNTDGID          DC I +GDDCIAI SG           T ++ I 
Sbjct: 183 LRINAPESSPNTDGIDVGASSNVVIQDCIIATGDDCIAINSG-----------TSNIHIS 242

Query: 308 RLTCISPNSAGIALGSEMSGG----IRNVRIENVTAINIESAVRIKIARRRGGFVKDIFV 367
            + C  P   GI++GS    G    + NV ++N       +  RIK  +   G+ + I  
Sbjct: 243 GIDC-GPGH-GISIGSLGKDGETATVENVCVQNCNFRGTMNGARIKTWQGGSGYARMITF 302

Query: 368 QRMFLSTIK--------YIAGDYKDHADDKFDPSALPEIKNINYRNVV 387
             + L  ++        Y  GD  D+A D+   S+  E+  + + N +
Sbjct: 303 NGITLDNVENPIIIDQFYNGGD-SDNAKDR--KSSAVEVSKVVFSNFI 328

[Close]

BLAST of CmaCh15G010740 vs. Swiss-Prot
Match: PGLR_RHIRD (Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.0e-10
Identity = 44/127 (34.65%), Postives = 68/127 (53.54%), Query Frame = 1


Query: 241 TILAPITVPNTDGIDPD-CYIVS--------GDDCIAIKSG--WDEYSIKFRMPTEDLVI 300
           TI+AP   PNTDG +P+ C  V         GDDCIA+K+G    +        T  + +
Sbjct: 62  TIIAPHDSPNTDGFNPESCRNVMISGVRFSVGDDCIAVKAGKRGPDGEDDHLAETRGITV 121

Query: 301 RRLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKI-ARRRGGFVKDIFVQR 356
           R    + P   G+ +GSEMSGG+ +V +E+   I  +  +R+K  AR  GG V +I ++R
Sbjct: 122 RHCL-MQPGHGGLVIGSEMSGGVHDVTVEDCDMIGTDRGLRLKTGARSGGGMVGNITMRR 181

[Close]

BLAST of CmaCh15G010740 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-07
Identity = 66/255 (25.88%), Postives = 111/255 (43.53%), Query Frame = 1


Query: 189 DRQGSYWWDKF--------HKGELNITRPYMIEIMYSQIQISDLTL--INSPSYRNVIIE 248
           D QGS  ++K          K  +NI   ++   +   I   D  L  IN  + +N+ +E
Sbjct: 127 DGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNITLE 186

Query: 249 GLTILAPITVPNTDGIDPD---------CYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVI 308
            L I AP   PNTDGI              I +GDDCI+I  G           T+++VI
Sbjct: 187 RLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVI 246

Query: 309 RRLTCISPNSAGIALGS----EMSGGIRNVRIENVTAINIESAVRIKI-ARRRGGFVKDI 368
           + +TC  P   GI++GS    +    +  ++I N T  N  +  RIK      GG V +I
Sbjct: 247 KEITC-GPGH-GISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEI 306

Query: 369 FVQRMFLSTIK---YIAGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISG 416
             + + ++ +     I   Y      K +  +  ++ NI+++N+   +    A     SG
Sbjct: 307 HFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSG 366

[Close]

BLAST of CmaCh15G010740 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-07
Identity = 66/255 (25.88%), Postives = 111/255 (43.53%), Query Frame = 1


Query: 189 DRQGSYWWDKF--------HKGELNITRPYMIEIMYSQIQISDLTL--INSPSYRNVIIE 248
           D QGS  ++K          K  +NI   ++   +   I   D  L  IN  + +N+ +E
Sbjct: 127 DGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNITLE 186

Query: 249 GLTILAPITVPNTDGIDPD---------CYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVI 308
            L I AP   PNTDGI              I +GDDCI+I  G           T+++VI
Sbjct: 187 RLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDG-----------TKNMVI 246

Query: 309 RRLTCISPNSAGIALGS----EMSGGIRNVRIENVTAINIESAVRIKI-ARRRGGFVKDI 368
           + +TC  P   GI++GS    +    +  ++I N T  N  +  RIK      GG V +I
Sbjct: 247 KEITC-GPGH-GISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEI 306

Query: 369 FVQRMFLSTIK---YIAGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISG 416
             + + ++ +     I   Y      K +  +  ++ NI+++N+   +    A     SG
Sbjct: 307 HFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSG 366

[Close]

BLAST of CmaCh15G010740 vs. TrEMBL
Match: A0A0A0KNF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G140480 PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.4e-103
Identity = 194/263 (73.76%), Postives = 218/263 (82.89%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QG+YWWDKFHKGELN+TRPY+IEIMYS QIQISDLTL+NSPS+       +NVII+G
Sbjct: 171 IDGQGAYWWDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQG 230

Query: 248 LTILAPITVPNTDGIDPD---------CYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAPI  PNTDGIDPD         C+IVSGDDCIA+KSGWD+Y IKF MPTEDLVI+
Sbjct: 231 LTILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIK 290

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SAG+ALGSEMSGGIRNVRIEN T IN +SAVRIK AR RGGFVKDIFV+ M+
Sbjct: 291 RLTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMY 350

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G+YK H DDKFDP+ALPEI NINYR+VVAENVT SA L  ISGDPF NI
Sbjct: 351 LSTMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNI 410

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNVKI L+  PKKLQWN T +
Sbjct: 411 CISNVKIGLTATPKKLQWNCTDV 433

[Close]

BLAST of CmaCh15G010740 vs. TrEMBL
Match: K7LL01_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.8e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 163 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 222

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 223 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 282

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 283 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 342

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 343 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 402

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 403 CISNVSIQVSEQKKKLQWNCTDV 425

[Close]

BLAST of CmaCh15G010740 vs. TrEMBL
Match: I1LDL9_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=2)

HSP 1 Score: 341.3 bits (874), Expect = 1.8e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 168 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 227

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 228 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 287

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 288 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 347

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 348 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 407

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 408 CISNVSIQVSEQKKKLQWNCTDV 430

[Close]

BLAST of CmaCh15G010740 vs. TrEMBL
Match: K7LL00_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.8e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 163 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 222

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 223 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 282

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 283 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 342

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 343 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 402

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 403 CISNVSIQVSEQKKKLQWNCTDV 425

[Close]

BLAST of CmaCh15G010740 vs. TrEMBL
Match: A0A0B2QK52_GLYSO (Putative polygalacturonase OS=Glycine soja GN=glysoja_027669 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.8e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 148 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 207

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 208 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 267

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 268 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 327

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 328 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 387

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 388 CISNVSIQVSEQKKKLQWNCTDV 410

[Close]

BLAST of CmaCh15G010740 vs. TAIR10
Match: AT4G23500.1 (AT4G23500.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 320.1 bits (819), Expect = 2.1e-87
Identity = 162/263 (61.60%), Postives = 197/263 (74.90%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYSQ-IQISDLTLINSPSYR-------NVIIEG 247
           ID QG  WW KF +GEL  TRPY+IEIM+S  IQIS+LT +NSPS+        N+ I+G
Sbjct: 183 IDGQGEPWWGKFKRGELKYTRPYLIEIMHSDGIQISNLTFLNSPSWHIHPVYSSNIYIQG 242

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+TVPNTDGI+P         DCYIVSGDDCIA+KSGWD+Y I + MPT+ L+IR
Sbjct: 243 LTILAPVTVPNTDGINPDSCTNTRIEDCYIVSGDDCIAVKSGWDQYGINYGMPTKQLLIR 302

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI +VR E++ AIN ES +RIK A  RGG+VKD++V+ M 
Sbjct: 303 RLTCISPDSAVIALGSEMSGGIEDVRAEDIVAINSESGIRIKTAIGRGGYVKDVYVRGMT 362

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           + T+KY+    G Y  H DD +DP ALP I+NINY+++VAENVTM A LA ISGD F  I
Sbjct: 363 MMTMKYVFWMTGSYGSHPDDHYDPKALPVIQNINYQDMVAENVTMPAQLAGISGDQFTGI 422

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I LSKKPKK+ WN T +
Sbjct: 423 CISNVTITLSKKPKKVLWNCTDV 445

[Close]

BLAST of CmaCh15G010740 vs. TAIR10
Match: AT3G48950.1 (AT3G48950.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 320.1 bits (819), Expect = 2.1e-87
Identity = 159/263 (60.46%), Postives = 201/263 (76.43%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYSQ-IQISDLTLINSPSYR-------NVIIEG 247
           I+ QG YWWDKF K +  ITRPY+IEI++S+ IQIS++TLI+SPS+        +VI++ 
Sbjct: 161 INGQGQYWWDKFKKKQFKITRPYLIEILFSKNIQISNITLIDSPSWNIHPVYCNSVIVKS 220

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           +T+LAP+TVPNTDGI+P         DCYIVSGDDCIA+KSGWD+Y IKF MPT+ L IR
Sbjct: 221 VTVLAPVTVPNTDGINPDSCTNTLIEDCYIVSGDDCIAVKSGWDQYGIKFGMPTQQLSIR 280

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP SAG+ALGSEMSGGI++VRIE+VT  N ESA+RIK A  RG +VKDI+ +R+ 
Sbjct: 281 RLTCISPKSAGVALGSEMSGGIKDVRIEDVTLTNTESAIRIKTAVGRGAYVKDIYARRIT 340

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           + T+KY+   +G+Y  H D+ FDP ALPEI NINYR++ AENVTMSA+L  I  DPF  I
Sbjct: 341 MKTMKYVFWMSGNYGSHPDEGFDPKALPEITNINYRDMTAENVTMSASLDGIDKDPFTGI 400

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I L+ K KK+QWN T +
Sbjct: 401 CISNVTIALAAKAKKMQWNCTDV 423

[Close]

BLAST of CmaCh15G010740 vs. TAIR10
Match: AT3G61490.1 (AT3G61490.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 302.0 bits (772), Expect = 6.0e-82
Identity = 152/258 (58.91%), Postives = 189/258 (73.26%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYSQ-IQISDLTLINSPSYR-------NVIIEG 247
           ID QGS+WW KFH G+L  TRPY+IE+M+S  IQIS+LT ++SPS+        N+I++G
Sbjct: 160 IDGQGSFWWQKFHGGKLKYTRPYLIELMFSDTIQISNLTFLDSPSWNIHPVYSSNIIVKG 219

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           +TI+AP+  PNTDGI+P         DCYI+SGDDCIA+KSGWDEY I F MPT+ LVIR
Sbjct: 220 VTIIAPVKSPNTDGINPDSCTNTRIEDCYIISGDDCIAVKSGWDEYGISFGMPTKHLVIR 279

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP SA IALGSEMSGGI +VR E++TA   ES VRIK A  RG FVK+I+V+ M 
Sbjct: 280 RLTCISPYSAAIALGSEMSGGIEDVRAEDITAYQTESGVRIKTAVGRGAFVKNIYVKGMN 339

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 426
           L T+K++    G+YK HAD  +DP ALPEI  INYR++VAENV+M+  L  ISGDPF  I
Sbjct: 340 LHTMKWVFWMTGNYKAHADSHYDPHALPEITGINYRDIVAENVSMAGRLEGISGDPFTGI 399

[Close]

BLAST of CmaCh15G010740 vs. TAIR10
Match: AT2G23900.1 (AT2G23900.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-79
Identity = 148/264 (56.06%), Postives = 191/264 (72.35%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELN-ITRPYMIEIMYSQ-IQISDLTLINSPSYR-------NVIIE 247
           I+ QG YWW K+  G    ITRPY IEI++SQ +QIS++T+I+SP++        NVI++
Sbjct: 171 INGQGKYWWVKYRSGGFKGITRPYTIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVK 230

Query: 248 GLTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVI 307
           G+TILAPI  PNTDGI+P         DCY+VSGDDCIA+KSGWD++ IK  MPT+ L I
Sbjct: 231 GVTILAPIDSPNTDGINPDSCTNTLIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQLSI 290

Query: 308 RRLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRM 367
           RRLTCISP+SAGIALGSEMSGGI++VRIE++T +  +SA+RIK A  RGG+VKDIF +R 
Sbjct: 291 RRLTCISPDSAGIALGSEMSGGIKDVRIEDITLLQTQSAIRIKTAVGRGGYVKDIFARRF 350

Query: 368 FLSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMN 427
            + T+KY+   +G Y  H    FDP A+P I NINYR++ A+NVT  A L     DPF  
Sbjct: 351 TMKTMKYVFWMSGAYNQHPASGFDPKAMPVITNINYRDMTADNVTQPARLDGFKNDPFTK 410

Query: 428 ICVSNVKIELSKKPKKLQWNYTKI 431
           IC+SN+KI+L+ +PKKL WN T I
Sbjct: 411 ICMSNIKIDLAAEPKKLLWNCTSI 434

[Close]

BLAST of CmaCh15G010740 vs. TAIR10
Match: AT3G62110.1 (AT3G62110.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 227.3 bits (578), Expect = 1.9e-59
Identity = 113/264 (42.80%), Postives = 166/264 (62.88%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYSQ-IQISDLTLINSPSY-------RNVIIEG 247
           ID QG+ WWD F  GELN TRP+++E+M S  + IS+LT +NSP +       R+V+++ 
Sbjct: 158 IDGQGTVWWDWFRNGELNYTRPHLVELMNSTGLIISNLTFLNSPFWNIHPVYCRDVVVKN 217

Query: 248 LTILAPITVPNTDGIDPD---------CYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDG+DPD         CYIV+GDD ++IKSGWDEY I +  P+  + I 
Sbjct: 218 LTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGDDLVSIKSGWDEYGISYARPSSKIKIN 277

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLT  + +S+GIA+GSEMSGG+  + I+++   N  + +RIK +  RGG+V+++ +  + 
Sbjct: 278 RLTGQTTSSSGIAIGSEMSGGVSEIYIKDLHLFNSNTGIRIKTSAGRGGYVRNVHILNVK 337

Query: 368 LSTIK---YIAGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           L  +K      G Y +H D+K+DP ALP I+ I + NV  + + ++  L  I GD F NI
Sbjct: 338 LDNVKKAIRFTGKYGEHPDEKYDPKALPAIEKITFENVNGDGIGVAGLLEGIEGDVFKNI 397

Query: 428 CVSNVKIELSKKPKKLQWNYTKIR 432
           C  NV + + K  KK  W  + +R
Sbjct: 398 CFLNVTLRVKKNSKKSPWECSNVR 421

[Close]

BLAST of CmaCh15G010740 vs. NCBI nr
Match: gi|659074299|ref|XP_008437531.1| (PREDICTED: probable polygalacturonase [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 1.8e-104
Identity = 197/263 (74.90%), Postives = 220/263 (83.65%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHKGELN+TRPYMIEI+YS QIQIS+LTL+NSPS+       +NVII+G
Sbjct: 169 IDGQGSYWWDKFHKGELNLTRPYMIEILYSDQIQISNLTLVNSPSWFVHPIYSKNVIIQG 228

Query: 248 LTILAPITVPNTDGIDPD---------CYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAPI  PNTDGIDPD         C+IVSGDDCIA+KSGWD+Y IKF MPTEDLVIR
Sbjct: 229 LTILAPIDSPNTDGIDPDSCSNIRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIR 288

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SAGIALGSEMSGGIRNVRIENVT IN +SAVRIK AR RGGFVKDIFV+ M+
Sbjct: 289 RLTCISPDSAGIALGSEMSGGIRNVRIENVTGINTQSAVRIKTARGRGGFVKDIFVRGMY 348

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G+YK H D+KFDP+ALPEI NINYR+VVAENVT SA L  ISGDPF NI
Sbjct: 349 LSTMKYVFWMTGNYKSHPDEKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNI 408

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNVKI L+ KPKKLQWN T +
Sbjct: 409 CISNVKIGLTAKPKKLQWNCTDV 431

[Close]

BLAST of CmaCh15G010740 vs. NCBI nr
Match: gi|778699038|ref|XP_011654644.1| (PREDICTED: probable polygalacturonase [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 2.0e-103
Identity = 194/263 (73.76%), Postives = 218/263 (82.89%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QG+YWWDKFHKGELN+TRPY+IEIMYS QIQISDLTL+NSPS+       +NVII+G
Sbjct: 171 IDGQGAYWWDKFHKGELNLTRPYLIEIMYSDQIQISDLTLVNSPSWFVHPIYSKNVIIQG 230

Query: 248 LTILAPITVPNTDGIDPD---------CYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAPI  PNTDGIDPD         C+IVSGDDCIA+KSGWD+Y IKF MPTEDLVI+
Sbjct: 231 LTILAPIDSPNTDGIDPDSCSNTRIEDCFIVSGDDCIAVKSGWDQYGIKFGMPTEDLVIK 290

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SAG+ALGSEMSGGIRNVRIEN T IN +SAVRIK AR RGGFVKDIFV+ M+
Sbjct: 291 RLTCISPDSAGVALGSEMSGGIRNVRIENFTGINTQSAVRIKTARGRGGFVKDIFVRGMY 350

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G+YK H DDKFDP+ALPEI NINYR+VVAENVT SA L  ISGDPF NI
Sbjct: 351 LSTMKYVFWMTGNYKSHPDDKFDPAALPEITNINYRDVVAENVTYSARLEGISGDPFTNI 410

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNVKI L+  PKKLQWN T +
Sbjct: 411 CISNVKIGLTATPKKLQWNCTDV 433

[Close]

BLAST of CmaCh15G010740 vs. NCBI nr
Match: gi|947086519|gb|KRH35240.1| (hypothetical protein GLYMA_10G231100 [Glycine max])

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 163 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 222

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 223 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 282

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 283 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 342

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 343 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 402

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 403 CISNVSIQVSEQKKKLQWNCTDV 425

[Close]

BLAST of CmaCh15G010740 vs. NCBI nr
Match: gi|356535839|ref|XP_003536450.1| (PREDICTED: probable polygalacturonase [Glycine max])

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 168 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 227

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 228 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 287

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 288 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 347

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 348 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 407

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 408 CISNVSIQVSEQKKKLQWNCTDV 430

[Close]

BLAST of CmaCh15G010740 vs. NCBI nr
Match: gi|734377949|gb|KHN21784.1| (Putative polygalacturonase [Glycine soja])

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 174/263 (66.16%), Postives = 203/263 (77.19%), Query Frame = 1


Query: 188 IDRQGSYWWDKFHKGELNITRPYMIEIMYS-QIQISDLTLINSPSY-------RNVIIEG 247
           ID QGSYWWDKFHK +LN+TRPYMIEIMYS QIQIS+LTL+NSPS+        N+ I+G
Sbjct: 164 IDGQGSYWWDKFHKNQLNLTRPYMIEIMYSDQIQISNLTLVNSPSWFVHPIYSSNITIKG 223

Query: 248 LTILAPITVPNTDGIDP---------DCYIVSGDDCIAIKSGWDEYSIKFRMPTEDLVIR 307
           LTILAP+  PNTDGIDP         DCYIVSGDDC+A+KSGWDEY IKF  PT+ LVIR
Sbjct: 224 LTILAPVDSPNTDGIDPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIKFGKPTQHLVIR 283

Query: 308 RLTCISPNSAGIALGSEMSGGIRNVRIENVTAINIESAVRIKIARRRGGFVKDIFVQRMF 367
           RLTCISP+SA IALGSEMSGGI++VR+E++TAIN +SAVRIK A  RGG+VKDIFV+ M 
Sbjct: 284 RLTCISPDSAMIALGSEMSGGIQDVRVEDITAINTQSAVRIKTAVGRGGYVKDIFVKGMT 343

Query: 368 LSTIKYI---AGDYKDHADDKFDPSALPEIKNINYRNVVAENVTMSANLAKISGDPFMNI 427
           LST+KY+    G Y  H D  FDP ALP I  INYR+VVA NVT SA L  IS DPF  I
Sbjct: 344 LSTMKYVFWMTGSYGSHPDPAFDPKALPNITGINYRDVVATNVTYSAKLEGISNDPFTGI 403

Query: 428 CVSNVKIELSKKPKKLQWNYTKI 431
           C+SNV I++S++ KKLQWN T +
Sbjct: 404 CISNVSIQVSEQKKKLQWNCTDV 426

The following BLAST results are available for this feature:

BLAST of CmaCh15G010740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_VITVI	2.1e-81	57.79	Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1	[more]
PGLR3_ARATH	6.8e-11	29.82	Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana GN=At3g15720 PE=1 S...	[more]
PGLR_RHIRD	2.0e-10	34.65	Polygalacturonase OS=Rhizobium radiobacter GN=pgl PE=2 SV=1	[more]
PGLR_GOSBA	1.2e-07	25.88	Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1	[more]
PGLR_GOSHI	1.2e-07	25.88	Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1	[more]

BLAST of CmaCh15G010740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNF9_CUCSA	1.4e-103	73.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G140480 PE=3 SV=1	[more]
K7LL01_SOYBN	1.8e-90	66.16	Uncharacterized protein OS=Glycine max PE=3 SV=1	[more]
I1LDL9_SOYBN	1.8e-90	66.16	Uncharacterized protein OS=Glycine max PE=3 SV=2	[more]
K7LL00_SOYBN	1.8e-90	66.16	Uncharacterized protein OS=Glycine max PE=3 SV=1	[more]
A0A0B2QK52_GLYSO	1.8e-90	66.16	Putative polygalacturonase OS=Glycine soja GN=glysoja_027669 PE=3 SV=1	[more]

BLAST of CmaCh15G010740 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23500.1	2.1e-87	61.60	Pectin lyase-like superfamily protein	[more]
AT3G48950.1	2.1e-87	60.46	Pectin lyase-like superfamily protein	[more]
AT3G61490.1	6.0e-82	58.91	Pectin lyase-like superfamily protein	[more]
AT2G23900.1	1.2e-79	56.06	Pectin lyase-like superfamily protein	[more]
AT3G62110.1	1.9e-59	42.80	Pectin lyase-like superfamily protein	[more]

BLAST of CmaCh15G010740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074299\|ref\|XP_008437531.1\|	1.8e-104	74.90	PREDICTED: probable polygalacturonase [Cucumis melo]	[more]
gi\|778699038\|ref\|XP_011654644.1\|	2.0e-103	73.76	PREDICTED: probable polygalacturonase [Cucumis sativus]	[more]
gi\|947086519\|gb\|KRH35240.1\|	2.5e-90	66.16	hypothetical protein GLYMA_10G231100 [Glycine max]	[more]
gi\|356535839\|ref\|XP_003536450.1\|	2.5e-90	66.16	PREDICTED: probable polygalacturonase [Glycine max]	[more]
gi\|734377949\|gb\|KHN21784.1\|	2.5e-90	66.16	Putative polygalacturonase [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G010740.1	CmaCh15G010740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 19..144 score: 7.1E-8coord: 187..422 score: 5.8
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 188..420 score: 2.22E-47coord: 3..177 score: 1.39
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 6..158 score: 8.9E-28coord: 188..428 score: 6.1
None	No IPR available	PANTHER	PTHR31339	FAMILY NOT NAMED	coord: 188..431 score: 7.8E
None	No IPR available	PANTHER	PTHR31339:SF17	ENDO-POLYGALACTURONASE-LIKE PROTEIN-RELATED	coord: 188..431 score: 7.8E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G010740	Cucumber (Gy14) v2	cgybcmaB602
CmaCh15G010740	Melon (DHL92) v3.6.1	cmamedB292
CmaCh15G010740	Silver-seed gourd	carcmaB0992
CmaCh15G010740	Silver-seed gourd	carcmaB1365
CmaCh15G010740	Cucumber (Chinese Long) v3	cmacucB0342
CmaCh15G010740	Watermelon (97103) v2	cmawmbB284
CmaCh15G010740	Wax gourd	cmawgoB0368
CmaCh15G010740	Cucurbita maxima (Rimu)	cmacmaB242
CmaCh15G010740	Cucurbita maxima (Rimu)	cmacmaB300
CmaCh15G010740	Cucurbita maxima (Rimu)	cmacmaB306
CmaCh15G010740	Cucurbita maxima (Rimu)	cmacmaB313
CmaCh15G010740	Cucumber (Gy14) v1	cgycmaB0560
CmaCh15G010740	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G010740	Cucurbita moschata (Rifu)	cmacmoB289
CmaCh15G010740	Cucurbita moschata (Rifu)	cmacmoB292
CmaCh15G010740	Cucurbita moschata (Rifu)	cmacmoB299
CmaCh15G010740	Wild cucumber (PI 183967)	cmacpiB298
CmaCh15G010740	Cucumber (Chinese Long) v2	cmacuB292
CmaCh15G010740	Melon (DHL92) v3.5.1	cmameB257
CmaCh15G010740	Watermelon (Charleston Gray)	cmawcgB255
CmaCh15G010740	Watermelon (Charleston Gray)	cmawcgB266
CmaCh15G010740	Watermelon (97103) v1	cmawmB269
CmaCh15G010740	Watermelon (97103) v1	cmawmB272
CmaCh15G010740	Cucurbita pepo (Zucchini)	cmacpeB301
CmaCh15G010740	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G010740	Cucurbita pepo (Zucchini)	cmacpeB307
CmaCh15G010740	Cucurbita pepo (Zucchini)	cmacpeB330
CmaCh15G010740	Bottle gourd (USVL1VR-Ls)	cmalsiB262
CmaCh15G010740	Bottle gourd (USVL1VR-Ls)	cmalsiB290