CmaCh15G010560 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G010560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	EPIDERMAL PATTERNING FACTOR-like protein 6
Location	Cma_Chr15 : 6670545 .. 6671272 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATTATATCTTGATTTTGGAAAGCATTAAAGGGAGCACCACAAGGCTTGTGAAACAATCAAATTTGGTTGTGTATGAAGTTCAACCGAACCAATAAACCTAAACCCTGTTTCTTCTTCTTAATGTTTTTCATGATCTTCATATTGTTCTCAGACAACACAAAGCGCTGCTCAACTGCTCAATCTGGCCATGCACATATCGAGGTAAAGTTATTTTAGTTCCAATATTATAAATGCATTATACTGTGCGACCCCATCGCTAATTATGCAACCTAGGTGCTCAAGGTCGTTGGAGATCATGAACATCAAGAGTTGACCTTGCCAAGAGGAAGATTGGGTAGGCCGGGATCGTCGCCGCCACATTGCACCTCAAAGTGTGGGAAATGCACGCCCTGCACCCCGGTTCTTGTGTCGGTGCCACCAGAAACTCCGACCGTGGGTGATTATTACCCGTCAGTCTGGAGATGCAAATGTAAGGGCAAGCTCTACATTCCTTGATCGAAAAAGGCAAGCCCCTCGGATGTCTATGCTCTTATATGTTACATTTCCTGATCGAAAAAGGCAAACCCCTCGGATGTCGCCGTCGCTTACGTATGCTCTTATATGTTACTTATCCGCTTATGAGCTGACGCGAAAAACTATGAATTTACCATAGTTTGGTGTATCTCCTATCATAGATCATGTAGGTGAATAAGATTATATACGAATATTTTATGGGCTCGATCCAG

mRNA sequence

TGTATTATATCTTGATTTTGGAAAGCATTAAAGGGAGCACCACAAGGCTTGTGAAACAATCAAATTTGGTTGTGTATGAAGTTCAACCGAACCAATAAACCTAAACCCTGTTTCTTCTTCTTAATGTTTTTCATGATCTTCATATTGTTCTCAGACAACACAAAGCGCTGCTCAACTGCTCAATCTGGCCATGCACATATCGAGGTGCTCAAGGTCGTTGGAGATCATGAACATCAAGAGTTGACCTTGCCAAGAGGAAGATTGGGTAGGCCGGGATCGTCGCCGCCACATTGCACCTCAAAGTGTGGGAAATGCACGCCCTGCACCCCGGTTCTTGTGTCGGTGCCACCAGAAACTCCGACCGTGGGTGATTATTACCCGTCAGTCTGGAGATGCAAATGTAAGGGCAAGCTCTACATTCCTTGATCGAAAAAGGCAAGCCCCTCGGATGTCTATGCTCTTATATGTTACATTTCCTGATCGAAAAAGGCAAACCCCTCGGATGTCGCCGTCGCTTACGTATGCTCTTATATGTTACTTATCCGCTTATGAGCTGACGCGAAAAACTATGAATTTACCATAGTTTGGTGTATCTCCTATCATAGATCATGTAGGTGAATAAGATTATATACGAATATTTTATGGGCTCGATCCAG

Coding sequence (CDS)

ATGAAGTTCAACCGAACCAATAAACCTAAACCCTGTTTCTTCTTCTTAATGTTTTTCATGATCTTCATATTGTTCTCAGACAACACAAAGCGCTGCTCAACTGCTCAATCTGGCCATGCACATATCGAGGTGCTCAAGGTCGTTGGAGATCATGAACATCAAGAGTTGACCTTGCCAAGAGGAAGATTGGGTAGGCCGGGATCGTCGCCGCCACATTGCACCTCAAAGTGTGGGAAATGCACGCCCTGCACCCCGGTTCTTGTGTCGGTGCCACCAGAAACTCCGACCGTGGGTGATTATTACCCGTCAGTCTGGAGATGCAAATGTAAGGGCAAGCTCTACATTCCTTGA

Protein sequence

MKFNRTNKPKPCFFFLMFFMIFILFSDNTKRCSTAQSGHAHIEVLKVVGDHEHQELTLPRGRLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP

Homology

[Close]

BLAST of CmaCh15G010560 vs. Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 1


Query: 67  GSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           GSSPP C+SKCG+CTPC PV V VPP TP   +YYP  WRCKC  KLY+P
Sbjct: 107 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of CmaCh15G010560 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 8.7e-14
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 1


Query: 62  RLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           R G PGSSPP C SKCGKC PC PV V + P      +YYP  WRCKC  KL++P
Sbjct: 55  RFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CmaCh15G010560 vs. Swiss-Prot
Match: EPFL5_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 30/55 (54.55%), Postives = 34/55 (61.82%), Query Frame = 1


Query: 62  RLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           RLG PGS PP C  KCGKC PC  V V + P      +YYP  WRCKC  KL++P
Sbjct: 53  RLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CmaCh15G010560 vs. Swiss-Prot
Match: EPFL8_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana GN=EPFL8 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.1e-06
Identity = 34/114 (29.82%), Postives = 47/114 (41.23%), Query Frame = 1


Query: 6   TNKPKPCFFFLMFFMIFILFSDNTKRCSTAQSGHAHIEVLKVVGDHEHQELTLPRGRLGR 65
           + K K C F    F+  I FS  +  C              + G H HQ+    R +   
Sbjct: 4   SRKYKRCGFGAALFVANIFFSLLSLHC--------------ISGAHGHQQ----RMKESV 63

Query: 66  PGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGD---YYPSVWRCKCKGKLYIP 117
            GS PP C +KC  C PC P L  +        D   YYP  W C+C+ +++ P
Sbjct: 64  MGSEPPVCATKCRNCKPCLPYLFDIRGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

[Close]

BLAST of CmaCh15G010560 vs. TrEMBL
Match: A0A0A0LXR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533610 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.7e-25
Identity = 65/135 (48.15%), Postives = 74/135 (54.81%), Query Frame = 1


Query: 4   NRTNKPKPC---------FFFLMFFMIFILFS-------------DNTKRCSTAQSGHAH 63
           N+TN PKP          FFF +F M+FIL S             DNT+ CS  +S    
Sbjct: 12  NKTN-PKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSFGKSVQYS 71

Query: 64  IEVLKVVGDHEHQELTLPRGRLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYY 117
           I        H+ Q + LPR  LG PGSSPP C SKCGKCTPCT V V VPP TP   +YY
Sbjct: 72  IIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYY 131

[Close]

BLAST of CmaCh15G010560 vs. TrEMBL
Match: V7B894_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G248700g PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-21
Identity = 57/124 (45.97%), Postives = 66/124 (53.23%), Query Frame = 1


Query: 4   NRTNKPKPCFFFLMFFMIFILFSDNTK---------RCSTAQSGHAHIEVLKVVGDHEHQ 63
           N T+     FFFL+     I  S  T          +C T    H   +  KVV   +  
Sbjct: 12  NTTHLSSVSFFFLLSICTLIFSSRITTASTIPCLDTKCPTFTKAHTDFQENKVVSGGKRD 71

Query: 64  ELTL--PRGRLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGK 117
            L++  PR  LG PGSSPP CTSKCGKCTPC PV V VPP TP   +YYP  WRCKC  K
Sbjct: 72  VLSMGWPRRLLGGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNK 131

[Close]

BLAST of CmaCh15G010560 vs. TrEMBL
Match: B9I6W3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s15150g PE=4 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 53/113 (46.90%), Postives = 60/113 (53.10%), Query Frame = 1


Query: 13  FFFLMFFMIFILFSDNTK-----RCSTAQSGH----AHIEVLKVVGDHEHQELTLPRGRL 72
           FFFL F  +F   S  T      RC  +           E  +  GD     L++ R  L
Sbjct: 27  FFFLSFVALFSTISSKTTCLGIIRCPLSGKARNFYFQEFEKTRGYGDPMEVSLSMARRFL 86

Query: 73  GRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
             PGSSPP CTSKCGKCTPC PV V VPP TP   +YYP  WRCKC  KLY+P
Sbjct: 87  SGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 139

[Close]

BLAST of CmaCh15G010560 vs. TrEMBL
Match: M5W6R6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023991mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-19
Identity = 50/111 (45.05%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 10  KPCFFFLMFFM-IFILFSDNT---KRCSTAQSGHAHIEVLKVVGDHEHQELTLPRGRLGR 69
           KPC FFL+    +F   + NT    RC+       + + L +        L++ R  L  
Sbjct: 15  KPCLFFLLSISALFTTINSNTCPDSRCALKAKDGTYFQRLNI-------PLSMARRYLSG 74

Query: 70  PGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           PGSSPP CTSKCG+CTPC PV V VPP TP   +YYP  WRCKC  +LY+P
Sbjct: 75  PGSSPPRCTSKCGRCTPCKPVHVPVPPGTPVTTEYYPEAWRCKCGNRLYMP 118

[Close]

BLAST of CmaCh15G010560 vs. TrEMBL
Match: B9INN4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14870g PE=4 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 2.8e-19
Identity = 54/112 (48.21%), Postives = 65/112 (58.04%), Query Frame = 1


Query: 13  FFFLMFFMIFILFSDNTK----RCSTAQSG-HAHI-EVLKVVGDHEHQELTLPRGR--LG 72
           FFFL F  +F  F+ NT     RC  ++   H +  E  K  G  E  E++    R  L 
Sbjct: 28  FFFLSFVALFSPFTSNTTCLGIRCPLSEKADHFYFQEFEKTRGYDEQMEVSSSMARRFLS 87

Query: 73  RPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
            PGSSPP CTSKCG CTPC PV V++PP TP   +YYP  WRCKC  KLY+P
Sbjct: 88  GPGSSPPRCTSKCGNCTPCKPVHVAMPPGTPVTTEYYPEAWRCKCGNKLYMP 139

[Close]

BLAST of CmaCh15G010560 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related)

HSP 1 Score: 87.4 bits (215), Expect = 6.2e-18
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 1


Query: 67  GSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           GSSPP C+SKCG+CTPC PV V VPP TP   +YYP  WRCKC  KLY+P
Sbjct: 181 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of CmaCh15G010560 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 77.8 bits (190), Expect = 4.9e-15
Identity = 32/55 (58.18%), Postives = 36/55 (65.45%), Query Frame = 1


Query: 62  RLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           R G PGSSPP C SKCGKC PC PV V + P      +YYP  WRCKC  KL++P
Sbjct: 55  RFGGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CmaCh15G010560 vs. TAIR10
Match: AT3G22820.1 (AT3G22820.1 allergen-related)

HSP 1 Score: 70.9 bits (172), Expect = 6.0e-13
Identity = 30/55 (54.55%), Postives = 34/55 (61.82%), Query Frame = 1


Query: 62  RLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
           RLG PGS PP C  KCGKC PC  V V + P      +YYP  WRCKC  KL++P
Sbjct: 53  RLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CmaCh15G010560 vs. TAIR10
Match: AT1G80133.1 (AT1G80133.1 unknown protein)

HSP 1 Score: 52.0 bits (123), Expect = 2.9e-07
Identity = 34/114 (29.82%), Postives = 47/114 (41.23%), Query Frame = 1


Query: 6   TNKPKPCFFFLMFFMIFILFSDNTKRCSTAQSGHAHIEVLKVVGDHEHQELTLPRGRLGR 65
           + K K C F    F+  I FS  +  C              + G H HQ+    R +   
Sbjct: 4   SRKYKRCGFGAALFVANIFFSLLSLHC--------------ISGAHGHQQ----RMKESV 63

Query: 66  PGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGD---YYPSVWRCKCKGKLYIP 117
            GS PP C +KC  C PC P L  +        D   YYP  W C+C+ +++ P
Sbjct: 64  MGSEPPVCATKCRNCKPCLPYLFDIRGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

[Close]

BLAST of CmaCh15G010560 vs. TAIR10
Match: AT1G71866.1 (AT1G71866.1 LOCATED IN: endomembrane system)

HSP 1 Score: 47.0 bits (110), Expect = 9.3e-06
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 1


Query: 67  GSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLY 115
           GSS P C++ CG C PC  V++S    T +  +  P V++C CKGK Y
Sbjct: 122 GSSIPDCSNACGPCKPCKLVVIS---STCSASEACPLVYKCLCKGKYY 166

[Close]

BLAST of CmaCh15G010560 vs. NCBI nr
Match: gi|778661835|ref|XP_011658830.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 65/135 (48.15%), Postives = 74/135 (54.81%), Query Frame = 1


Query: 4   NRTNKPKPC---------FFFLMFFMIFILFS-------------DNTKRCSTAQSGHAH 63
           N+TN PKP          FFF +F M+FIL S             DNT+ CS  +S    
Sbjct: 12  NKTN-PKPILILILIFISFFFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSFGKSVQYS 71

Query: 64  IEVLKVVGDHEHQELTLPRGRLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYY 117
           I        H+ Q + LPR  LG PGSSPP C SKCGKCTPCT V V VPP TP   +YY
Sbjct: 72  IIANCEDDHHQDQFMRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYY 131

[Close]

BLAST of CmaCh15G010560 vs. NCBI nr
Match: gi|659114962|ref|XP_008457315.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 6.0e-23
Identity = 64/145 (44.14%), Postives = 78/145 (53.79%), Query Frame = 1


Query: 1   MKFNRT-----NKPKP----------CFFFLMFFMIFILFS-------------DNTKRC 60
           M+FNR      NK  P           FFF +F M+FIL S             DNT+ C
Sbjct: 1   MEFNRNRVVIENKTNPKSIFIFILIFFFFFFLFLMVFILSSFCSSIRSSSNGDSDNTRSC 60

Query: 61  STAQSGHAHIEVLKVVG-DHEHQELTLPRGRLGRPGSSPPHCTSKCGKCTPCTPVLVSVP 117
           S  ++    ++   +   + + Q + LPR  LG PGSSPP CTSKCGKCTPCT V V VP
Sbjct: 61  SFVEA----VQYPMIANCEDQDQFMRLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVP 120

[Close]

BLAST of CmaCh15G010560 vs. NCBI nr
Match: gi|593509741|ref|XP_007142055.1| (hypothetical protein PHAVU_008G248700g [Phaseolus vulgaris])

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-21
Identity = 57/124 (45.97%), Postives = 66/124 (53.23%), Query Frame = 1


Query: 4   NRTNKPKPCFFFLMFFMIFILFSDNTK---------RCSTAQSGHAHIEVLKVVGDHEHQ 63
           N T+     FFFL+     I  S  T          +C T    H   +  KVV   +  
Sbjct: 12  NTTHLSSVSFFFLLSICTLIFSSRITTASTIPCLDTKCPTFTKAHTDFQENKVVSGGKRD 71

Query: 64  ELTL--PRGRLGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGK 117
            L++  PR  LG PGSSPP CTSKCGKCTPC PV V VPP TP   +YYP  WRCKC  K
Sbjct: 72  VLSMGWPRRLLGGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNK 131

[Close]

BLAST of CmaCh15G010560 vs. NCBI nr
Match: gi|802540790|ref|XP_012078300.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Jatropha curcas])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = 1


Query: 9   PKPCFFFLMFFMIFILF-----SDNTK--RCS-TAQSGHAHIEVLKVVGDHEHQELTLPR 68
           P  CF F  FF  F  F     S N    +CS + ++G  H +  +   + E+ ++++  
Sbjct: 19  PFYCFSFFFFFFSFCAFFTIITSTNCLGIKCSFSGKAGGFHFQDFEEKRERENMDISIIA 78

Query: 69  GR--LGRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
            R  L  PGSSPP CTSKCGKCTPC PV V VPP TP   +YYP  WRCKC  KLY+P
Sbjct: 79  VRRVLSGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 136

[Close]

BLAST of CmaCh15G010560 vs. NCBI nr
Match: gi|566201437|ref|XP_002319414.2| (hypothetical protein POPTR_0013s15150g [Populus trichocarpa])

HSP 1 Score: 104.0 bits (258), Expect = 1.8e-19
Identity = 53/113 (46.90%), Postives = 60/113 (53.10%), Query Frame = 1


Query: 13  FFFLMFFMIFILFSDNTK-----RCSTAQSGH----AHIEVLKVVGDHEHQELTLPRGRL 72
           FFFL F  +F   S  T      RC  +           E  +  GD     L++ R  L
Sbjct: 27  FFFLSFVALFSTISSKTTCLGIIRCPLSGKARNFYFQEFEKTRGYGDPMEVSLSMARRFL 86

Query: 73  GRPGSSPPHCTSKCGKCTPCTPVLVSVPPETPTVGDYYPSVWRCKCKGKLYIP 117
             PGSSPP CTSKCGKCTPC PV V VPP TP   +YYP  WRCKC  KLY+P
Sbjct: 87  SGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 139

The following BLAST results are available for this feature:

BLAST of CmaCh15G010560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPFL6_ARATH	1.1e-16	68.00	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1...	[more]
EPFL4_ARATH	8.7e-14	58.18	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1...	[more]
EPFL5_ARATH	1.1e-11	54.55	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana GN=EPFL5 PE=1...	[more]
EPFL8_ARATH	5.1e-06	29.82	EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana GN=EPFL8 PE=1...	[more]

BLAST of CmaCh15G010560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR9_CUCSA	7.7e-25	48.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533610 PE=4 SV=1	[more]
V7B894_PHAVU	1.0e-21	45.97	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G248700g PE=4 SV=1	[more]
B9I6W3_POPTR	1.3e-19	46.90	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s15150g PE=4 SV=2	[more]
M5W6R6_PRUPE	2.2e-19	45.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023991mg PE=4 SV=1	[more]
B9INN4_POPTR	2.8e-19	48.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s14870g PE=4 SV=2	[more]

BLAST of CmaCh15G010560 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30370.1	6.2e-18	68.00	allergen-related	[more]
AT4G14723.1	4.9e-15	58.18	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:A...	[more]
AT3G22820.1	6.0e-13	54.55	allergen-related	[more]
AT1G80133.1	2.9e-07	29.82	unknown protein	[more]
AT1G71866.1	9.3e-06	43.75	LOCATED IN: endomembrane system	[more]

BLAST of CmaCh15G010560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661835\|ref\|XP_011658830.1\|	1.1e-24	48.15	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis sativus]	[more]
gi\|659114962\|ref\|XP_008457315.1\|	6.0e-23	44.14	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Cucumis melo]	[more]
gi\|593509741\|ref\|XP_007142055.1\|	1.5e-21	45.97	hypothetical protein PHAVU_008G248700g [Phaseolus vulgaris]	[more]
gi\|802540790\|ref\|XP_012078300.1\|	1.8e-19	45.76	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Jatropha curcas]	[more]
gi\|566201437\|ref\|XP_002319414.2\|	1.8e-19	46.90	hypothetical protein POPTR_0013s15150g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G010560.1	CmaCh15G010560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 12..116 score: 9.2
None	No IPR available	PANTHER	PTHR33109:SF2	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6	coord: 12..116 score: 9.2
None	No IPR available	PFAM	PF17181	EPF	coord: 65..116 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G010560	Cp4.1LG13g02880	Cucurbita pepo (Zucchini)	cmacpeB305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G010560	Cucumber (Gy14) v2	cgybcmaB602
CmaCh15G010560	Melon (DHL92) v3.6.1	cmamedB292
CmaCh15G010560	Silver-seed gourd	carcmaB0805
CmaCh15G010560	Silver-seed gourd	carcmaB1365
CmaCh15G010560	Cucumber (Chinese Long) v3	cmacucB0342
CmaCh15G010560	Watermelon (97103) v2	cmawmbB284
CmaCh15G010560	Watermelon (97103) v2	cmawmbB307
CmaCh15G010560	Wax gourd	cmawgoB0368
CmaCh15G010560	Wax gourd	cmawgoB0389
CmaCh15G010560	Cucurbita maxima (Rimu)	cmacmaB242
CmaCh15G010560	Cucurbita maxima (Rimu)	cmacmaB300
CmaCh15G010560	Cucurbita maxima (Rimu)	cmacmaB306
CmaCh15G010560	Cucurbita maxima (Rimu)	cmacmaB313
CmaCh15G010560	Cucumber (Gy14) v1	cgycmaB0599
CmaCh15G010560	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G010560	Cucurbita moschata (Rifu)	cmacmoB289
CmaCh15G010560	Cucurbita moschata (Rifu)	cmacmoB292
CmaCh15G010560	Cucurbita moschata (Rifu)	cmacmoB299
CmaCh15G010560	Wild cucumber (PI 183967)	cmacpiB298
CmaCh15G010560	Cucumber (Chinese Long) v2	cmacuB292
CmaCh15G010560	Melon (DHL92) v3.5.1	cmameB257
CmaCh15G010560	Watermelon (Charleston Gray)	cmawcgB255
CmaCh15G010560	Watermelon (Charleston Gray)	cmawcgB266
CmaCh15G010560	Watermelon (97103) v1	cmawmB269
CmaCh15G010560	Watermelon (97103) v1	cmawmB272
CmaCh15G010560	Cucurbita pepo (Zucchini)	cmacpeB301
CmaCh15G010560	Cucurbita pepo (Zucchini)	cmacpeB307
CmaCh15G010560	Cucurbita pepo (Zucchini)	cmacpeB330
CmaCh15G010560	Bottle gourd (USVL1VR-Ls)	cmalsiB262
CmaCh15G010560	Bottle gourd (USVL1VR-Ls)	cmalsiB290