CmaCh15G008730 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G008730
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionGlutamate decarboxylase
LocationCma_Chr15 : 4426600 .. 4426896 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGTCCAAAGCATTCTCTGAATCTGATGTTTCTATACATTCCACATTCGCCTCCCGCTATGTCCGGGACTCTTCTCCTCGGTTCACCATCCCCCAAAACTCCATGTCCAAGGAGGCCGCCTTTCAGATCATCAACGACGAGCTCATGCTGGACGGCAACCCACGCCTCAATTTGGCATCCTTCGTCACCACATGGATGGAGCCCGAATGCGACAAGCTCATCATGGACTCAATCAATAAAAACTACGTCAACATGGACGAGTACCCTGTCGCCACCGGTGCATCAACATGA

mRNA sequence

ATGGTGATGTCCAAAGCATTCTCTGAATCTGATGTTTCTATACATTCCACATTCGCCTCCCGCTATGTCCGGGACTCTTCTCCTCGGTTCACCATCCCCCAAAACTCCATGTCCAAGGAGGCCGCCTTTCAGATCATCAACGACGAGCTCATGCTGGACGGCAACCCACGCCTCAATTTGGCATCCTTCGTCACCACATGGATGGAGCCCGAATGCGACAAGCTCATCATGGACTCAATCAATAAAAACTACGTCAACATGGACGAGTACCCTGTCGCCACCGGTGCATCAACATGA

Coding sequence (CDS)

ATGGTGATGTCCAAAGCATTCTCTGAATCTGATGTTTCTATACATTCCACATTCGCCTCCCGCTATGTCCGGGACTCTTCTCCTCGGTTCACCATCCCCCAAAACTCCATGTCCAAGGAGGCCGCCTTTCAGATCATCAACGACGAGCTCATGCTGGACGGCAACCCACGCCTCAATTTGGCATCCTTCGTCACCACATGGATGGAGCCCGAATGCGACAAGCTCATCATGGACTCAATCAATAAAAACTACGTCAACATGGACGAGTACCCTGTCGCCACCGGTGCATCAACATGA

Protein sequence

MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVNMDEYPVATGAST
Homology
[Close]
BLAST of CmaCh15G008730 vs. Swiss-Prot
Match: DCE4_ARATH (Glutamate decarboxylase 4 OS=Arabidopsis thaliana GN=GAD4 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-40
Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  SESDVSIHSTFASRYVR+S PRF +P+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTVSESDVSIHSTFASRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKL+M+SINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLMMESINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 6.0e-40
Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  S+SDVSIHSTFASRYVR S PRF +P NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKL+MDSINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 7.8e-40
Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+S A SESDVS+HSTFASRYVR S PRF +P+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIM SINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. Swiss-Prot
Match: DCE3_ARATH (Glutamate decarboxylase 3 OS=Arabidopsis thaliana GN=GAD3 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-35
Identity = 73/94 (77.66%), Postives = 82/94 (87.23%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  S+SD SIHSTFASRYVR+S  RF IP+NS+ KEAA+QIINDEL  DGNPRLNL
Sbjct: 1  MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKL+M+SINKN V MD+YPV T
Sbjct: 61 ASFVTTWMEPECDKLMMESINKNNVEMDQYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. Swiss-Prot
Match: DCE5_ARATH (Glutamate decarboxylase 5 OS=Arabidopsis thaliana GN=GAD5 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-34
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 1 

Query: 8  SESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNLASFVTTW 67
          S+SD  +HSTFASRYVR   PRF +P + M K+AA+Q+INDELMLDGNPRLNLASFVTTW
Sbjct: 7  SDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVTTW 66

Query: 68 MEPECDKLIMDSINKNYVNMDEYPVAT 95
          MEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 67 MEPECDKLIMDSVNKNYVDMDEYPVTT 93

[Close]
BLAST of CmaCh15G008730 vs. TrEMBL
Match: A0A0A0KLK1_CUCSA (Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G100000 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.9e-42
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV SK FSESDVSIHSTFASRYVRDS+PRFT+P NSM KEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVFSKTFSESDVSIHSTFASRYVRDSAPRFTMPDNSMPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. TrEMBL
Match: A0A0A0KPU6_CUCSA (Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G106010 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-39
Identity = 79/94 (84.04%), Postives = 87/94 (92.55%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK FSESDVS+HSTFAS YVR+S+PR TIP NSM K+ AFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTFSESDVSVHSTFASPYVRNSAPRLTIPNNSMPKDVAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECD+LIMDSINKNYV+MDEYP+ T
Sbjct: 61 ASFVTTWMEPECDRLIMDSINKNYVDMDEYPITT 94

[Close]
BLAST of CmaCh15G008730 vs. TrEMBL
Match: A0A059D6B5_EUCGR (Glutamate decarboxylase OS=Eucalyptus grandis GN=EUGRSUZ_B02632 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38
Identity = 81/94 (86.17%), Postives = 87/94 (92.55%), Query Frame = 1 

Query: 1   MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
           MV+SK  SESDVSIHSTFASRYVR S PRF +P+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 61  MVLSKTASESDVSIHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 120

Query: 61  ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
           ASFVTTWMEPECDKLIMDSINKNYV+MDEYPV T
Sbjct: 121 ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTT 154

[Close]
BLAST of CmaCh15G008730 vs. TrEMBL
Match: V5TFY3_SCUBA (Glutamate decarboxylase OS=Scutellaria baicalensis GN=GAD2 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38
Identity = 80/94 (85.11%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  S+SD SIHSTF SRYVRD+ PRF IP+NS+ KEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTNSQSDASIHSTFGSRYVRDALPRFKIPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDSINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. TrEMBL
Match: B9HJL9_POPTR (Glutamate decarboxylase OS=Populus trichocarpa GN=POPTR_0008s14070g PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38
Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK FS+SDVS+HSTFASRYVR+S PR+ +P+NS+ KEAAFQIINDELMLDG PRLNL
Sbjct: 1  MVLSKIFSQSDVSMHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDSINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. TAIR10
Match: AT2G02010.1 (AT2G02010.1 glutamate decarboxylase 4)

HSP 1 Score: 165.6 bits (418), Expect = 1.5e-41
Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  SESDVSIHSTFASRYVR+S PRF +P+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTVSESDVSIHSTFASRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKL+M+SINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLMMESINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. TAIR10
Match: AT5G17330.1 (AT5G17330.1 glutamate decarboxylase)

HSP 1 Score: 164.1 bits (414), Expect = 4.4e-41
Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+S A SESDVS+HSTFASRYVR S PRF +P+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIM SINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. TAIR10
Match: AT2G02000.1 (AT2G02000.1 glutamate decarboxylase 3)

HSP 1 Score: 149.8 bits (377), Expect = 8.6e-37
Identity = 73/94 (77.66%), Postives = 82/94 (87.23%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  S+SD SIHSTFASRYVR+S  RF IP+NS+ KEAA+QIINDEL  DGNPRLNL
Sbjct: 1  MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKL+M+SINKN V MD+YPV T
Sbjct: 61 ASFVTTWMEPECDKLMMESINKNNVEMDQYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. TAIR10
Match: AT3G17760.1 (AT3G17760.1 glutamate decarboxylase 5)

HSP 1 Score: 146.7 bits (369), Expect = 7.3e-36
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 1 

Query: 8  SESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNLASFVTTW 67
          S+SD  +HSTFASRYVR   PRF +P + M K+AA+Q+INDELMLDGNPRLNLASFVTTW
Sbjct: 7  SDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNLASFVTTW 66

Query: 68 MEPECDKLIMDSINKNYVNMDEYPVAT 95
          MEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 67 MEPECDKLIMDSVNKNYVDMDEYPVTT 93

[Close]
BLAST of CmaCh15G008730 vs. TAIR10
Match: AT1G65960.2 (AT1G65960.2 glutamate decarboxylase 2)

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-33
Identity = 66/94 (70.21%), Postives = 80/94 (85.11%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV++K  + +D S+ + F SRYVR + P++ I +NS+ K+AA+QII DELMLDGNPRLNL
Sbjct: 1  MVLTKT-ATNDESVCTMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDSINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTT 93

[Close]
BLAST of CmaCh15G008730 vs. NCBI nr
Match: gi|778698418|ref|XP_011654530.1| (PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV SK FSESDVSIHSTFASRYVRDS+PRFT+P NSM KEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVFSKTFSESDVSIHSTFASRYVRDSAPRFTMPDNSMPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. NCBI nr
Match: gi|700194572|gb|KGN49749.1| (Glutamate decarboxylase [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV SK FSESDVSIHSTFASRYVRDS+PRFT+P NSM KEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVFSKTFSESDVSIHSTFASRYVRDSAPRFTMPDNSMPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. NCBI nr
Match: gi|659072700|ref|XP_008466806.1| (PREDICTED: glutamate decarboxylase 4-like [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-41
Identity = 85/94 (90.43%), Postives = 89/94 (94.68%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV SK FSESDVSIHSTFASRYVRDS+PRFT+P NSM KEAAFQIINDELMLDGNPRLNL
Sbjct: 1  MVFSKTFSESDVSIHSTFASRYVRDSAPRFTMPDNSMPKEAAFQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. NCBI nr
Match: gi|1009125553|ref|XP_015879672.1| (PREDICTED: glutamate decarboxylase [Ziziphus jujuba])

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-40
Identity = 83/94 (88.30%), Postives = 88/94 (93.62%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK FSESDVSIHSTFASRYVR S PRF IP+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTFSESDVSIHSTFASRYVRTSLPRFKIPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDSINKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTT 94

[Close]
BLAST of CmaCh15G008730 vs. NCBI nr
Match: gi|729304197|ref|XP_010527839.1| (PREDICTED: glutamate decarboxylase 4 [Tarenaya hassleriana])

HSP 1 Score: 167.9 bits (424), Expect = 8.6e-39
Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = 1 

Query: 1  MVMSKAFSESDVSIHSTFASRYVRDSSPRFTIPQNSMSKEAAFQIINDELMLDGNPRLNL 60
          MV+SK  S+SDVS+HSTFASRYVRDS PRF +P+NS+ KEAA+QIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASQSDVSVHSTFASRYVRDSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMDSINKNYVNMDEYPVAT 95
          ASFVTTWMEPECDKLIMDS+NKNYV+MDEYPV T
Sbjct: 61 ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTT 94

The following BLAST results are available for this feature:
BLAST of CmaCh15G008730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DCE4_ARATH2.7e-4084.04Glutamate decarboxylase 4 OS=Arabidopsis thaliana GN=GAD4 PE=1 SV=1[more]
DCE_PETHY6.0e-4084.04Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1[more]
DCE1_ARATH7.8e-4084.04Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2[more]
DCE3_ARATH1.5e-3577.66Glutamate decarboxylase 3 OS=Arabidopsis thaliana GN=GAD3 PE=2 SV=1[more]
DCE5_ARATH1.3e-3478.16Glutamate decarboxylase 5 OS=Arabidopsis thaliana GN=GAD5 PE=2 SV=1[more]
BLAST of CmaCh15G008730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KLK1_CUCSA9.9e-4290.43Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G100000 PE=3 SV=1[more]
A0A0A0KPU6_CUCSA6.0e-3984.04Glutamate decarboxylase OS=Cucumis sativus GN=Csa_5G106010 PE=3 SV=1[more]
A0A059D6B5_EUCGR1.0e-3886.17Glutamate decarboxylase OS=Eucalyptus grandis GN=EUGRSUZ_B02632 PE=3 SV=1[more]
V5TFY3_SCUBA1.8e-3885.11Glutamate decarboxylase OS=Scutellaria baicalensis GN=GAD2 PE=2 SV=1[more]
B9HJL9_POPTR1.8e-3884.04Glutamate decarboxylase OS=Populus trichocarpa GN=POPTR_0008s14070g PE=3 SV=1[more]
BLAST of CmaCh15G008730 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G02010.11.5e-4184.04 glutamate decarboxylase 4[more]
AT5G17330.14.4e-4184.04 glutamate decarboxylase[more]
AT2G02000.18.6e-3777.66 glutamate decarboxylase 3[more]
AT3G17760.17.3e-3678.16 glutamate decarboxylase 5[more]
AT1G65960.29.8e-3370.21 glutamate decarboxylase 2[more]
BLAST of CmaCh15G008730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778698418|ref|XP_011654530.1|1.4e-4190.43PREDICTED: glutamate decarboxylase 4-like [Cucumis sativus][more]
gi|700194572|gb|KGN49749.1|1.4e-4190.43Glutamate decarboxylase [Cucumis sativus][more]
gi|659072700|ref|XP_008466806.1|1.4e-4190.43PREDICTED: glutamate decarboxylase 4-like [Cucumis melo][more]
gi|1009125553|ref|XP_015879672.1|7.8e-4088.30PREDICTED: glutamate decarboxylase [Ziziphus jujuba][more]
gi|729304197|ref|XP_010527839.1|8.6e-3984.04PREDICTED: glutamate decarboxylase 4 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002129PyrdxlP-dep_de-COase
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0019530 taurine metabolic process
biological_process GO:0019752 carboxylic acid metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004351 glutamate decarboxylase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016831 carboxy-lyase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G008730.1CmaCh15G008730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002129Pyridoxal phosphate-dependent decarboxylasePFAMPF00282Pyridoxal_deCcoord: 33..94
score: 7.5
IPR015424Pyridoxal phosphate-dependent transferaseunknownSSF53383PLP-dependent transferasescoord: 15..94
score: 6.02
NoneNo IPR availablePANTHERPTHR11999GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASEcoord: 1..94
score: 5.0
NoneNo IPR availablePANTHERPTHR11999:SF113GLUTAMATE DECARBOXYLASE 2coord: 1..94
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh15G008730CmoCh15G009100Cucurbita moschata (Rifu)cmacmoB287
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh15G008730Cucumber (Gy14) v2cgybcmaB612
CmaCh15G008730Melon (DHL92) v3.6.1cmamedB286
CmaCh15G008730Silver-seed gourdcarcmaB0664
CmaCh15G008730Silver-seed gourdcarcmaB1148
CmaCh15G008730Cucumber (Chinese Long) v3cmacucB0356
CmaCh15G008730Watermelon (97103) v2cmawmbB289
CmaCh15G008730Wax gourdcmawgoB0376
CmaCh15G008730Cucurbita maxima (Rimu)cmacmaB325
CmaCh15G008730Cucumber (Gy14) v1cgycmaB1060
CmaCh15G008730Cucurbita moschata (Rifu)cmacmoB309
CmaCh15G008730Wild cucumber (PI 183967)cmacpiB307
CmaCh15G008730Cucumber (Chinese Long) v2cmacuB302
CmaCh15G008730Melon (DHL92) v3.5.1cmameB252
CmaCh15G008730Watermelon (Charleston Gray)cmawcgB260
CmaCh15G008730Watermelon (97103) v1cmawmB278
CmaCh15G008730Cucurbita pepo (Zucchini)cmacpeB305
CmaCh15G008730Cucurbita pepo (Zucchini)cmacpeB318
CmaCh15G008730Bottle gourd (USVL1VR-Ls)cmalsiB268