CmaCh15G007440 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh15G007440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing family protein
LocationCma_Chr15 : 3622900 .. 3623800 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTTTTAGGCATTGGATGAGTTGAGTTCTTAGAAATTTTATATGCGATGATTCATTCACAAGACGCGAAAGCTTGGAACTAAACGATTTCTTGGTTCAGAAAGTCTTAGCTCGGATTTCAGCTGCCCGCTGATGCCAAACGCGCTTTGGGGTTCTTCCACTGGTCGGCTAAGAGGAAGATTTTCAATCGTGGGTTTCAATCTTATGGTATTATGATTCATACTTCAGTGAAAGCGCGGCTGATAATTGATTGTAGATTCGCTATTGGATTCTTATGAGGTGACTGATTCATCCCCATTTGAATTCGATTTATTGATACAGCCTTGTGCTAAATTAAGATTGATTGATTGATTTTGCTTTGCCTGTGTGTTCCCATTTTGAGGGTTCTCGTTGAGTTATCGTAAGGTTTGGAAAATTTATGAGCTAATGATCCGGAAAAGACTTCGCCCAAATGCGATTACTGCTAGAACCATGATTAATTCGTTATGTAAATAAGGTAAATTGCAAGAAACTCCTGATATGTTGAATAGAATCCATGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGTTTGTTTGATTTACACGCTGTTGTGGAGAATGTTGCTGAAAAGTATGGTTCTTGATGACATTGCTTATTCATTGATTGTTTATGCTAAAGTAAAAATTGGGAATATAACATCCGCATGGGAAGTGTTTGAAGAAATGTCTGAAAGAGGGTTTCAGGCAAATTCTTTCACTTATACCTTGTTTATCGGTGTCTATTGTAGAGATGGGAAGATTGAAGAAACTCATTGCTTAATGCAAGAGATGGAAAACATAGGTTTGAAGTCATATCCTGAGACCTTTAATCTGTTCTATATCAGGACATTCAGAAGAAAGCTTGAGAATGTGTGA

mRNA sequence

ATGAATCTGCCCGCTGATGCCAAACGCGCTTTGGGGTTCTTCCACTGGTCGGCTAAGAGGAAGATTTTCAATCGTGGGTTTCAATCTTATGGTAAATTGCAAGAAACTCCTGATATGTTGAATAGAATCCATGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGTTTGTTTGATTTACACGCTGTTGTGGAGAATGTTGCTGAAAAGTATGGTTCTTGATGACATTGCTTATTCATTGATTGTTTATGCTAAAGTAAAAATTGGGAATATAACATCCGCATGGGAAGTGTTTGAAGAAATGTCTGAAAGAGGGTTTCAGGCAAATTCTTTCACTTATACCTTGTTTATCGGTGTCTATTGTAGAGATGGGAAGATTGAAGAAACTCATTGCTTAATGCAAGAGATGGAAAACATAGGTTTGAAGTCATATCCTGAGACCTTTAATCTGTTCTATATCAGGACATTCAGAAGAAAGCTTGAGAATGTGTGA

Coding sequence (CDS)

ATGAATCTGCCCGCTGATGCCAAACGCGCTTTGGGGTTCTTCCACTGGTCGGCTAAGAGGAAGATTTTCAATCGTGGGTTTCAATCTTATGGTAAATTGCAAGAAACTCCTGATATGTTGAATAGAATCCATGGCAGTCGTTGCTCTGCTTCTTTGATTGTCAATGTTTGTTTGATTTACACGCTGTTGTGGAGAATGTTGCTGAAAAGTATGGTTCTTGATGACATTGCTTATTCATTGATTGTTTATGCTAAAGTAAAAATTGGGAATATAACATCCGCATGGGAAGTGTTTGAAGAAATGTCTGAAAGAGGGTTTCAGGCAAATTCTTTCACTTATACCTTGTTTATCGGTGTCTATTGTAGAGATGGGAAGATTGAAGAAACTCATTGCTTAATGCAAGAGATGGAAAACATAGGTTTGAAGTCATATCCTGAGACCTTTAATCTGTTCTATATCAGGACATTCAGAAGAAAGCTTGAGAATGTGTGA

Protein sequence

MNLPADAKRALGFFHWSAKRKIFNRGFQSYGKLQETPDMLNRIHGSRCSASLIVNVCLIYTLLWRMLLKSMVLDDIAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMENIGLKSYPETFNLFYIRTFRRKLENV
Homology
[Close]
BLAST of CmaCh15G007440 vs. Swiss-Prot
Match: PP107_ARATH (Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana GN=At1g66345 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.4e-27
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           G+L+E  D+L+RI G RC  S+IVN  L++            +LL R+L+K+MV+D I Y
Sbjct: 248 GRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGY 307

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           S++VYAK K G++ SA +VF+EM +RGF ANSF YT+F+ V C  G ++E   L+ EME 
Sbjct: 308 SIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE 367

[Close]
BLAST of CmaCh15G007440 vs. Swiss-Prot
Match: PP180_ARATH (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 63  LWRMLLKSMVLDDIAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCR 122
           L+RM+   + L  ++Y+ ++    K GN+  A  +F EMS +G Q N+ TY + I  YC+
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516

Query: 123 DGKIEETHCLMQEMENIGL 142
            GKI+E   L   ME  G+
Sbjct: 517 QGKIKEARKLRANMEANGM 535

[Close]
BLAST of CmaCh15G007440 vs. Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06
Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1 

Query: 62  LLWRMLLKSMVLDDIAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYC 121
           L+ RM+      D + Y+ IV    + G+ + A ++  +M ER  +A+ FTY+  I   C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 122 RDGKIEETHCLMQEMENIGLKSYPETFN 150
           RDG I+    L +EME  G+KS   T+N
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYN 267

[Close]
BLAST of CmaCh15G007440 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-06
Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 1 

Query: 67  LLKSMVLDDIAYSLIVY-----AKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYC 126
           +L  MVL+  + S++ Y     A  + G +  A E+  +M+E+G + + FTYT  +  + 
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395

Query: 127 RDGKIEETHCLMQEMENIGLKSYPETFNLF 152
           R GK+E    + +EM N G K    TFN F
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAF 425

[Close]
BLAST of CmaCh15G007440 vs. Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.2e-06
Identity = 30/126 (23.81%), Postives = 67/126 (53.17%), Query Frame = 1 

Query: 25  RGFQSYGKLQETPDMLNRIHGS---RCSASLIVNVCLIYTL-----LWRMLLKSMV-LDD 84
           +G+   G+     ++ +R+      R  + L+  +C+ + +     L+  + KS + LD 
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416

Query: 85  IAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQE 142
             Y+++++   KIGN+  AW++F  +S +G + +  +YT  I  +CR  + +++  L ++
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476

[Close]
BLAST of CmaCh15G007440 vs. TrEMBL
Match: A0A0A0KRP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G423870 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.4e-50
Identity = 105/132 (79.55%), Postives = 110/132 (83.33%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           GKLQET DMLNRIHGSRCSASLIVN CLIY            TLL RML K+MVLDDIAY
Sbjct: 243 GKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAY 302

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK G+ITS WEVFEEMSERGFQANSF YTLFIGV+CR GK+EE HCLMQEMEN
Sbjct: 303 SLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMEN 362

[Close]
BLAST of CmaCh15G007440 vs. TrEMBL
Match: W9R7P1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019990 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-33
Identity = 74/131 (56.49%), Postives = 99/131 (75.57%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           GKLQ+  +ML+RIHG RCS S+IVN  L++             LL RML ++M+ D IAY
Sbjct: 415 GKLQKYVEMLDRIHGRRCSPSVIVNTSLVFKIFEEGRVEEGVVLLKRMLQRNMLFDTIAY 474

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAK+K+GNI SA +V+EEM +RGF+AN F YTLFI  YC++G+I+ETHC+M++ME+
Sbjct: 475 SLIVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAYCKEGRIDETHCMMKDMED 534

[Close]
BLAST of CmaCh15G007440 vs. TrEMBL
Match: M5X9J7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014874mg PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-33
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIYT------------LLWRMLLKSMVLDDIAY 90
           GKL++  DML+RIHG RCS S+IVN  L+++            LL RML K+MVLD IAY
Sbjct: 235 GKLKKCVDMLDRIHGKRCSPSVIVNTSLVFSILEGGRVEEGLMLLRRMLQKNMVLDTIAY 294

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK+G++ SAWEV+EEM +RGF+ANSF YTLF+G +C +G++EE   +M EMEN
Sbjct: 295 SLIVYAKVKLGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEEAQGMMNEMEN 354

[Close]
BLAST of CmaCh15G007440 vs. TrEMBL
Match: A0A067E6L0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016681mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.2e-33
Identity = 81/132 (61.36%), Postives = 91/132 (68.94%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           G+LQ   DML+RIHG RCS  +IVN  LI              LL RML K+M+ D IAY
Sbjct: 72  GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 131

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK+ N+ SA  V+EEM +RGF ANSF YT FIG YC  GKIEE +CLMQEMEN
Sbjct: 132 SLIVYAKVKMRNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 191

[Close]
BLAST of CmaCh15G007440 vs. TrEMBL
Match: B9H373_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0004s08990g PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32
Identity = 74/131 (56.49%), Postives = 95/131 (72.52%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           GKLQ   +ML++IHG RCS  +IVN CL++             LL  ML K+M+LD +AY
Sbjct: 247 GKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAY 306

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK+GN+ SA +V+EEM +RGF ANSF YT FIG YC++ +IEE + L+QEMEN
Sbjct: 307 SLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMEN 366

[Close]
BLAST of CmaCh15G007440 vs. TAIR10
Match: AT1G66345.1 (AT1G66345.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-28
Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           G+L+E  D+L+RI G RC  S+IVN  L++            +LL R+L+K+MV+D I Y
Sbjct: 248 GRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGY 307

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           S++VYAK K G++ SA +VF+EM +RGF ANSF YT+F+ V C  G ++E   L+ EME 
Sbjct: 308 SIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEE 367

[Close]
BLAST of CmaCh15G007440 vs. TAIR10
Match: AT2G32630.1 (AT2G32630.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.7e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 63  LWRMLLKSMVLDDIAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCR 122
           L+RM+   + L  ++Y+ ++    K GN+  A  +F EMS +G Q N+ TY + I  YC+
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516

Query: 123 DGKIEETHCLMQEMENIGL 142
            GKI+E   L   ME  G+
Sbjct: 517 QGKIKEARKLRANMEANGM 535

[Close]
BLAST of CmaCh15G007440 vs. TAIR10
Match: AT1G12700.1 (AT1G12700.1 ATP binding;nucleic acid binding;helicases)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1 

Query: 62  LLWRMLLKSMVLDDIAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYC 121
           L+ RM+      D + Y+ IV    + G+ + A ++  +M ER  +A+ FTY+  I   C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 122 RDGKIEETHCLMQEMENIGLKSYPETFN 150
           RDG I+    L +EME  G+KS   T+N
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYN 267

[Close]
BLAST of CmaCh15G007440 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.4e-07
Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 1 

Query: 67  LLKSMVLDDIAYSLIVY-----AKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYC 126
           +L  MVL+  + S++ Y     A  + G +  A E+  +M+E+G + + FTYT  +  + 
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395

Query: 127 RDGKIEETHCLMQEMENIGLKSYPETFNLF 152
           R GK+E    + +EM N G K    TFN F
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNICTFNAF 425

[Close]
BLAST of CmaCh15G007440 vs. TAIR10
Match: AT1G52640.1 (AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 52.0 bits (123), Expect = 4.1e-07
Identity = 23/84 (27.38%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 66  MLLKSMVLDDIAYSLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGK 125
           ML ++ V+D +AY+ ++ A  K G++   +++F+EM   G + +++++ +FI  YC  G 
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD 293

Query: 126 IEETHCLMQEMENIGLKSYPETFN 150
           +   + ++  M+   L     TFN
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFN 317

[Close]
BLAST of CmaCh15G007440 vs. NCBI nr
Match: gi|778702614|ref|XP_004140361.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 105/132 (79.55%), Postives = 110/132 (83.33%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           GKLQET DMLNRIHGSRCSASLIVN CLIY            TLL RML K+MVLDDIAY
Sbjct: 243 GKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDIAY 302

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK G+ITS WEVFEEMSERGFQANSF YTLFIGV+CR GK+EE HCLMQEMEN
Sbjct: 303 SLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQEMEN 362

[Close]
BLAST of CmaCh15G007440 vs. NCBI nr
Match: gi|659121166|ref|XP_008460527.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-46
Identity = 100/132 (75.76%), Postives = 107/132 (81.06%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIYT------------LLWRMLLKSMVLDDIAY 90
           GKLQET DMLNRIHGSRCSASLIVN CLIY             LL RML K+MVLDDIAY
Sbjct: 244 GKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGVMLLKRMLQKNMVLDDIAY 303

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK G+ITS WEVFEEMS+RGFQANSF YTL IGV+CR G++EE HCLMQEMEN
Sbjct: 304 SLIVYAKVKTGSITSTWEVFEEMSKRGFQANSFIYTLLIGVHCRGGEVEEAHCLMQEMEN 363

[Close]
BLAST of CmaCh15G007440 vs. NCBI nr
Match: gi|568857138|ref|XP_006482125.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Citrus sinensis])

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-33
Identity = 82/132 (62.12%), Postives = 92/132 (69.70%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           G+LQ   DML+RIHG RCS  +IVN  LI              LL RML K+M+ D IAY
Sbjct: 241 GQLQTYVDMLDRIHGKRCSPMVIVNTSLILRIIQEERIEEGMVLLKRMLRKNMIHDTIAY 300

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK+GN+ SA  V+EEM +RGF ANSF YT FIG YC  GKIEE +CLMQEMEN
Sbjct: 301 SLIVYAKVKMGNLESALVVYEEMLKRGFSANSFVYTTFIGAYCEYGKIEEANCLMQEMEN 360

[Close]
BLAST of CmaCh15G007440 vs. NCBI nr
Match: gi|703092950|ref|XP_010094780.1| (hypothetical protein L484_019990 [Morus notabilis])

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-33
Identity = 74/131 (56.49%), Postives = 99/131 (75.57%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIY------------TLLWRMLLKSMVLDDIAY 90
           GKLQ+  +ML+RIHG RCS S+IVN  L++             LL RML ++M+ D IAY
Sbjct: 415 GKLQKYVEMLDRIHGRRCSPSVIVNTSLVFKIFEEGRVEEGVVLLKRMLQRNMLFDTIAY 474

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAK+K+GNI SA +V+EEM +RGF+AN F YTLFI  YC++G+I+ETHC+M++ME+
Sbjct: 475 SLIVYAKLKLGNIVSAQDVYEEMLKRGFRANPFVYTLFIRAYCKEGRIDETHCMMKDMED 534

[Close]
BLAST of CmaCh15G007440 vs. NCBI nr
Match: gi|595913103|ref|XP_007214531.1| (hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica])

HSP 1 Score: 150.6 bits (379), Expect = 2.4e-33
Identity = 75/132 (56.82%), Postives = 99/132 (75.00%), Query Frame = 1 

Query: 31  GKLQETPDMLNRIHGSRCSASLIVNVCLIYT------------LLWRMLLKSMVLDDIAY 90
           GKL++  DML+RIHG RCS S+IVN  L+++            LL RML K+MVLD IAY
Sbjct: 235 GKLKKCVDMLDRIHGKRCSPSVIVNTSLVFSILEGGRVEEGLMLLRRMLQKNMVLDTIAY 294

Query: 91  SLIVYAKVKIGNITSAWEVFEEMSERGFQANSFTYTLFIGVYCRDGKIEETHCLMQEMEN 150
           SLIVYAKVK+G++ SAWEV+EEM +RGF+ANSF YTLF+G +C +G++EE   +M EMEN
Sbjct: 295 SLIVYAKVKLGDVCSAWEVYEEMLKRGFRANSFVYTLFMGAHCEEGRMEEAQGMMNEMEN 354

The following BLAST results are available for this feature:
BLAST of CmaCh15G007440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP107_ARATH7.4e-2747.33Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidop... [more]
PP180_ARATH1.0e-0736.71Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana GN... [more]
PPR38_ARATH1.9e-0635.23Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
PP362_ARATH4.2e-0633.33Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN... [more]
PPR93_ARATH7.2e-0623.81Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN... [more]
BLAST of CmaCh15G007440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRP7_CUCSA7.4e-5079.55Uncharacterized protein OS=Cucumis sativus GN=Csa_5G423870 PE=4 SV=1[more]
W9R7P1_9ROSA1.3e-3356.49Uncharacterized protein OS=Morus notabilis GN=L484_019990 PE=4 SV=1[more]
M5X9J7_PRUPE1.7e-3356.82Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa014874mg PE=4 S... [more]
A0A067E6L0_CITSI8.2e-3361.36Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016681mg PE=4 SV=1[more]
B9H373_POPTR1.4e-3256.49Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
BLAST of CmaCh15G007440 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66345.14.2e-2847.33 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G32630.15.7e-0936.71 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G12700.11.1e-0735.23 ATP binding;nucleic acid binding;helicases[more]
AT5G02860.12.4e-0733.33 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G52640.14.1e-0727.38 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CmaCh15G007440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702614|ref|XP_004140361.2|1.1e-4979.55PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial ... [more]
gi|659121166|ref|XP_008460527.1|1.9e-4675.76PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial ... [more]
gi|568857138|ref|XP_006482125.1|1.4e-3362.12PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial ... [more]
gi|703092950|ref|XP_010094780.1|1.8e-3356.49hypothetical protein L484_019990 [Morus notabilis][more]
gi|595913103|ref|XP_007214531.1|2.4e-3356.82hypothetical protein PRUPE_ppa014874mg, partial [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh15G007440.1CmaCh15G007440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 76..122
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 111..137
score: 1.3E-4coord: 77..109
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 109..143
score: 10.6coord: 74..108
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 4..149
score: 1.2
NoneNo IPR availablePANTHERPTHR24015:SF686SUBFAMILY NOT NAMEDcoord: 4..149
score: 1.2