CmaCh15G007230 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G007230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	tRNA modification GTPase MnmE
Location	Cma_Chr15 : 3508254 .. 3513117 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGAATCAGAGCTATGGCTCTGCTTCCAGGATTCCGCCATTTCATCACCCATTTTTGCAGAACCACGCCGCCAATGGCATTTCTCTTTACCCATTTCCATACCCCTATTTCCAGGCCATCCTCTCTCTTCCATATACCCAACCCCTCCAGCCCTGTTCTCCCGAAATCCCTGATAAAGTCCCACGCTTCTGGGAAAAGTCATTCCCCTAATCAATTTCTCTTATTTTCACTTCAACTTTACTGGGTTTGTCCATTTTCTCATTCTTGTTTCCTCTTAGTGCAGAAACTACATTCTTTTTGACTCGGGATGAGCGATTGGAGGATTCGCATGCCGGGATTGAGCGTGAACAAATTGAGAATTCAAGCACAATTGCAGCCATCGTGACATCCATGGGGGGTCCTCCTGCTGCGGTGGGCATTGTGCGTTTATCAGGTCCTCGTGCTGTGAATATCGTTGGGAGTTTATTTTGCCCTGCCGCGAAAAAGAAGGGGAAGAATGTGAGCCAGCAGCATCCATGGAGACCCACCAGCCATGTCGTGGAGTACGGTGTGGTATTGGACCAACAGGGCGATGTAATTGACGAAGTACAGTAATGTTTACTTTGCTATGCTTGGAAAATTTCTCAATTCTGCGTTATGCTGTTATGGGTGTAGGCTTTTGTTAGTTTATGATTAATTTGAGCTGTGGTTGTGCACTTTTGTGAAGGTTTTGACGGTGCCAATGTTAGCCCCAAGATCTTATACTCGTGAAGATGTGATCGAGATTCAGTGTCACGGAAGTGAAGTATGTCTTCGTCGTGTGTTAAAAGCTTGTTTAGAAGCTGGAGCCCGGCTTGCAGAACCAGGTTTGTTTCTGAACTGGAATCACTTAGTCATTAAATTCATTGTAAGATCCCACATCGGTTGGGGAGGAGAACAAAACACCCACCAGAACCGAGTGATCTTCCTGCGAGGAGGTTGAGCCCGAAATGGGGTGGACATGAGGCAATGTGCCAACAAGGACACTAGGCCCCAAAAGGGTAGATTGTGAGATCCCACATCCACATCGGTTGGGAAAGAGAAAGAAACACCCTTCTTAAGGGTCTGGAAACTCTCCCTAGCAGACACGTTTTAAAAACCTTGAAGGGAAGCCCAAAACGGAAATCTCAAAAAGAACAATATTTGCTAGCAGTGGGCTTGGGCGTTACATGGTTTGAAGGGTCTGGTAACTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAACTCAAAACGGAAAGCTCAAAGAGAACAATATTTGCTAACGGTGGGCTTGGGTGTTACATGGTCTATATACGTGCCCCTTTTCATTTTTATACATTCACTGAAGTGTTTGCTTGCATCCATGTAATTAAAGCATAGGCTAACGCATGAATTTATACTTTAGGTGAATTTACCCTTCGTGCATTCTTAAATGGTCGCTTAGACCTTTCACAAGCAGAAAATGTTGGGAAATTAATTTCAGCCAAGTCTACGGCTGCTGCTGATGCTGCGTTGGCTGGAATTCAGGTTGGGGTCTTCTTTATTTGACTGATAACGTTGCCTGAATGGCTGCCGACTTGTTTACTGAAGTATATTGTATTTTGGTAGGGTGGCTTCTCTTCCTTAGTCAAATTGCTAAGAACACAATGCATCGAATTACTCACTGAAATCGAGGCCCGACTAGACTTCGATGATGAGATGCCACCGTTGAATTTGGAAACTATAATGGAGAAAGTGCATGCCATGGCACAGGAAGTAGAGACTGCTCTCGAGACAGCCAATTATGACAAGCTTCTTCAATCTGGAATACAGGTAAACTTTTAAGAGTCGTCGAATCAGTTTGTTTCCTGGCACAAGAGATGCGTGCATTTGTTAATACCTTCTGTCATCTCCTTAAAACTTGCAGATAGCAATTGTTGGCCGTCCTAATGTTGGGAAGTCGAGCCTTCTTAATGCATGGAGCAAAGTAAGCTGCATAACGTCCTTGTTTTCCCTTTCAACTTGAACTCCTTTAGATGATTTATTCTATCTGTGAGTCTGATGTGATATCCGATAATCTTCATGTCAGTTCTTTCTTTTTCCTTGTTATTTCCGTTGAGTGGTTGTATTTTCACTTAATCTTGAAATCACCTACTGCTTTATCACATGGGAGAGCTTGCTTGACTTTCCAGATTTGGTGATATGTGACTGAGAAATCTTGGTCCTTGTTACTACTTTCATACCAGTAATGGTTTGTGAGATCCCATATCGGTTGGGGAGGAGAACGAAGCATTCCTTATAAAGGTGTGGAAACTTCTCCCTAGTAGACGCGTTTTAAAATCGTGAGGCTGACAACGATATGTAACGGACCAGAGCGGATGATATCTACTAGTAGTGGGCTTGGGCTATTACATTGCTGGAGAAAGAAATTGTAAACTTCTTAAAAATGCTAAAAGATTACAAACCTCATAATGGAAATTTCTGTTTGATATAGTGGTTTTCTTTTACTCTTAGTCACATTATTCCATTGTCACATTTATTATTTAGTGTGCAGAGCGAGAGGGCAATAGTTACAGAAATTGCTGGAACTACCAGGGATGTAATTGAAGCGAATGTTACCGTTTCTGGTATTCCTGTTACTCTTCTTGATACTGCTGGAATTAGGGAAACAGATGACATTGTGGAAAAGATAGGTATGATTTACTAATTTCAGCATTTCGAGGGTTTAGACAAAACATTTGGTGTTGTGCCATACAGATATATGATTATTTTCCCGAAACGAGTTGATTGCAGGCAGGTCACACAAACCATGTCGGTGTAGGTTGTAACTCGACCTACACCGACCATACATTCCCTTAAATCTTATTGACAACTCGACCATATGTTGAGTTGCCCTTAATTCTTCTCGAGTTGCAACCCGACAATACGTTCTCTACTCCTTGGTCACGGCCCTACTCTGTTCTACAGGTGTCGAGAGATCTGAAGCTGCTGCCCTCGGAGCTGATGTCATTATTATGACTATAAGTGCCCTCGATGGATGGACTGAAGAAGATACCATACTTCTCGATAGCATACTTGCAAAAAAGGTTTGACAGCAAAATCCTACCACCCTCTGCCTTCAATGAGTTCTGCTGATCAAAATTGGTGCTTATGTTTTCTTCTCTTTTAAATTCTTTGAAAGTACAGAAATCAGATGGATCAACCACGCCTATACTTCTTGTCATAAACAAGATAGACTGTGCTCCATCTGCTGCAAACATGGATGCAATTAGTATCAACCGTGACTCTTTCAGTAAACAAGTTTTTACATGCGCTGTCACTGGACAAGGAATAGAGCATCTGGAGATGGCAATATCAGAGCTGATGGGACTCAACAATACTCTTGCAAGTGGACGTAGATGGACGGTAAACCAGGTAACCTTTTCCTACCTTCCCCTCACCAAACAAGATTGAAAGAGTAATGAGCAATATAGAACTTATGGGTTAGTGTTGTTTTGGTCATACAATCAGAGACAATGCGAGCAGCTTCTTAGAACCAAGGAGGCACTTGGAAGATTGAAATCTTCGATTGAAGAGGAGCTGCCTCTTGACTTTTGGACAGTGGATTTGAGAGGTGCTGTATTAGCTCTTGGGGAAATTAGTGGTGAGGATATCTCTGAAGAGGTTTTGTCCAATATTTTTGGCAAGTTCTGTATTGGTAAGTAGAAAGTATCAATGTAATGTACTATTTGGTTATGAAATCCAATTATGTAAATGGATTTCATATTATTTTCCATTTCTAGCCATGGCTTCACTCGAGTCACTTTCAGGATGCCATCCCATTTTGGTCGCTTCCAGCTTCCAACATGTGGAAGTTTTTTCTGACCTGTGAACAGAGTGGTTGCAAATGTCTTTTAAACTCTCATAGGTCCTTGAACTTTTTTATTTTATCTCATAGCGTCTTAATTTATTCAACATATCATTTGACTTACAAATCGAGAGATAGTTTGACAATATAAGCCATCGTCATCTTCAACTGTGATTTTGTATCCAAGTGTCATCTGCATAGTTTGATGAAGGATGTAAAAGGGTGGTTTTCGTTTCGACCGTTGCTTGAGAAGAGTCTTTCAGATCAACTAACAGGCACAACTCTTCAAAGATGCAACACCATTGAAGATTTTATCCTCAACTCAAAATCACAAGGCCGTAGCACTCTGAAAAGGTGCCACACCATTGAAGGGTGTAGGGTTGTGTGTTTAAGCTGCTCCTCTCTCAGCTGTTGCCCTTGAAACGCAGTTTGTTCTCATGAGATTACACATGTTCGGAACGTTTTGAGGCTTAACTTTTCAGTTGCCTCGGATGGTCACTACAGGTAAAAGGATATGCTAGATTCTTTGTAAAGCTCAATAAGGAATAATAAATATTTTAGGTGCTGGCCGGTTCTTTCCCCCCTCCTTACCAGATGCTGCAAAAGCCATAAAAATATAGGTATATAGGACACCCTGCAGGCCATTGGACGGCAATGGCTATTTAAGTAGAATCATTTTGATGCTTGAGATTACATAACTCTGAAGGATAACCACAGTTTAAAATCATATCCTCCTGACAACCTCTAAAGGGGTTAAACTTGGTATAGAACCAATGTGTTTCAACATCAGAAGAAAGCTTACAAAAGAAGAAATGAAGGAGGAAGAGAAGAAAAGGAGAGCAAAGGAAAAGGAAAAACAGAGGAAGGAAGAAGAGAGGAAAGCCAAGGAGAAGAAGGAACGTGAAAAACAAAGGAAGAAAGAAGAGAGGAAAGCCGAGGAGACGAGGGAAAAGGAAGAAAATCTGAGAAACAAAAGGAAACAGCAGAAAGCATTGAAGATAGAGAAACAGAAAAACAAGACAAAGAGGAAATAA

mRNA sequence

TTCGAATCAGAGCTATGGCTCTGCTTCCAGGATTCCGCCATTTCATCACCCATTTTTGCAGAACCACGCCGCCAATGGCATTTCTCTTTACCCATTTCCATACCCCTATTTCCAGGCCATCCTCTCTCTTCCATATACCCAACCCCTCCAGCCCTGTTCTCCCGAAATCCCTGATAAAGTCCCACGCTTCTGGGAAAAAAACTACATTCTTTTTGACTCGGGATGAGCGATTGGAGGATTCGCATGCCGGGATTGAGCGTGAACAAATTGAGAATTCAAGCACAATTGCAGCCATCGTGACATCCATGGGGGGTCCTCCTGCTGCGGTGGGCATTGTGCGTTTATCAGGTCCTCGTGCTGTGAATATCGTTGGGAGTTTATTTTGCCCTGCCGCGAAAAAGAAGGGGAAGAATGTGAGCCAGCAGCATCCATGGAGACCCACCAGCCATGTCGTGGAGTACGGTGTGGTATTGGACCAACAGGGCGATGTTTTGACGGTGCCAATGTTAGCCCCAAGATCTTATACTCGTGAAGATGTGATCGAGATTCAGTGTCACGGAAGTGAAGTATGTCTTCGTCGTGAATTTACCCTTCGTGCATTCTTAAATGGTCGCTTAGACCTTTCACAAGCAGAAAATGTTGGGAAATTAATTTCAGCCAAGTCTACGGCTGCTGCTGATGCTGCGTTGGCTGGAATTCAGGGTGGCTTCTCTTCCTTAGTCAAATTGCTAAGAACACAATGCATCGAATTACTCACTGAAATCGAGGCCCGACTAGACTTCGATGATGAGATGCCACCGTTGAATTTGGAAACTATAATGGAGAAAGTGCATGCCATGGCACAGGAAGTAGAGACTGCTCTCGAGACAGCCAATTATGACAAGCTTCTTCAATCTGGAATACAGATAGCAATTGTTGGCCGTCCTAATGTTGGGAAGTCGAGCCTTCTTAATGCATGGAGCAAAAGCGAGAGGGCAATAGTTACAGAAATTGCTGGAACTACCAGGGATGTAATTGAAGCGAATGTTACCGTTTCTGGTATTCCTGTTACTCTTCTTGATACTGCTGGAATTAGGGAAACAGATGACATTGTGGAAAAGATAGGTGTCGAGAGATCTGAAGCTGCTGCCCTCGGAGCTGATGTCATTATTATGACTATAAGTGCCCTCGATGGATGGACTGAAGAAGATACCATACTTCTCGATAGCATACTTGCAAAAAAGAAATCAGATGGATCAACCACGCCTATACTTCTTGTCATAAACAAGATAGACTGTGCTCCATCTGCTGCAAACATGGATGCAATTAGTATCAACCGTGACTCTTTCAGTAAACAAGTTTTTACATGCGCTGTCACTGGACAAGGAATAGAGCATCTGGAGATGGCAATATCAGAGCTGATGGGACTCAACAATACTCTTGCAAGTGGACGTAGATGGACGGTAAACCAGAGACAATGCGAGCAGCTTCTTAGAACCAAGGAGGCACTTGGAAGATTGAAATCTTCGATTGAAGAGGAGCTGCCTCTTGACTTTTGGACAGTGGATTTGAGAGGTGCTGTATTAGCTCTTGGGGAAATTAGTGGTGAGGATATCTCTGAAGAGGTTTTGTCCAATATTTTTGGCAAGTTCTGTATTGAACCAATGTGTTTCAACATCAGAAGAAAGCTTACAAAAGAAGAAATGAAGGAGGAAGAGAAGAAAAGGAGAGCAAAGGAAAAGGAAAAACAGAGGAAGGAAGAAGAGAGGAAAGCCAAGGAGAAGAAGGAACGTGAAAAACAAAGGAAGAAAGAAGAGAGGAAAGCCGAGGAGACGAGGGAAAAGGAAGAAAATCTGAGAAACAAAAGGAAACAGCAGAAAGCATTGAAGATAGAGAAACAGAAAAACAAGACAAAGAGGAAATAA

Coding sequence (CDS)

ATGGCTCTGCTTCCAGGATTCCGCCATTTCATCACCCATTTTTGCAGAACCACGCCGCCAATGGCATTTCTCTTTACCCATTTCCATACCCCTATTTCCAGGCCATCCTCTCTCTTCCATATACCCAACCCCTCCAGCCCTGTTCTCCCGAAATCCCTGATAAAGTCCCACGCTTCTGGGAAAAAAACTACATTCTTTTTGACTCGGGATGAGCGATTGGAGGATTCGCATGCCGGGATTGAGCGTGAACAAATTGAGAATTCAAGCACAATTGCAGCCATCGTGACATCCATGGGGGGTCCTCCTGCTGCGGTGGGCATTGTGCGTTTATCAGGTCCTCGTGCTGTGAATATCGTTGGGAGTTTATTTTGCCCTGCCGCGAAAAAGAAGGGGAAGAATGTGAGCCAGCAGCATCCATGGAGACCCACCAGCCATGTCGTGGAGTACGGTGTGGTATTGGACCAACAGGGCGATGTTTTGACGGTGCCAATGTTAGCCCCAAGATCTTATACTCGTGAAGATGTGATCGAGATTCAGTGTCACGGAAGTGAAGTATGTCTTCGTCGTGAATTTACCCTTCGTGCATTCTTAAATGGTCGCTTAGACCTTTCACAAGCAGAAAATGTTGGGAAATTAATTTCAGCCAAGTCTACGGCTGCTGCTGATGCTGCGTTGGCTGGAATTCAGGGTGGCTTCTCTTCCTTAGTCAAATTGCTAAGAACACAATGCATCGAATTACTCACTGAAATCGAGGCCCGACTAGACTTCGATGATGAGATGCCACCGTTGAATTTGGAAACTATAATGGAGAAAGTGCATGCCATGGCACAGGAAGTAGAGACTGCTCTCGAGACAGCCAATTATGACAAGCTTCTTCAATCTGGAATACAGATAGCAATTGTTGGCCGTCCTAATGTTGGGAAGTCGAGCCTTCTTAATGCATGGAGCAAAAGCGAGAGGGCAATAGTTACAGAAATTGCTGGAACTACCAGGGATGTAATTGAAGCGAATGTTACCGTTTCTGGTATTCCTGTTACTCTTCTTGATACTGCTGGAATTAGGGAAACAGATGACATTGTGGAAAAGATAGGTGTCGAGAGATCTGAAGCTGCTGCCCTCGGAGCTGATGTCATTATTATGACTATAAGTGCCCTCGATGGATGGACTGAAGAAGATACCATACTTCTCGATAGCATACTTGCAAAAAAGAAATCAGATGGATCAACCACGCCTATACTTCTTGTCATAAACAAGATAGACTGTGCTCCATCTGCTGCAAACATGGATGCAATTAGTATCAACCGTGACTCTTTCAGTAAACAAGTTTTTACATGCGCTGTCACTGGACAAGGAATAGAGCATCTGGAGATGGCAATATCAGAGCTGATGGGACTCAACAATACTCTTGCAAGTGGACGTAGATGGACGGTAAACCAGAGACAATGCGAGCAGCTTCTTAGAACCAAGGAGGCACTTGGAAGATTGAAATCTTCGATTGAAGAGGAGCTGCCTCTTGACTTTTGGACAGTGGATTTGAGAGGTGCTGTATTAGCTCTTGGGGAAATTAGTGGTGAGGATATCTCTGAAGAGGTTTTGTCCAATATTTTTGGCAAGTTCTGTATTGAACCAATGTGTTTCAACATCAGAAGAAAGCTTACAAAAGAAGAAATGAAGGAGGAAGAGAAGAAAAGGAGAGCAAAGGAAAAGGAAAAACAGAGGAAGGAAGAAGAGAGGAAAGCCAAGGAGAAGAAGGAACGTGAAAAACAAAGGAAGAAAGAAGAGAGGAAAGCCGAGGAGACGAGGGAAAAGGAAGAAAATCTGAGAAACAAAAGGAAACAGCAGAAAGCATTGAAGATAGAGAAACAGAAAAACAAGACAAAGAGGAAATAA

Protein sequence

MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHASGKKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDVLTVPMLAPRSYTREDVIEIQCHGSEVCLRREFTLRAFLNGRLDLSQAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCIEPMCFNIRRKLTKEEMKEEEKKRRAKEKEKQRKEEERKAKEKKEREKQRKKEERKAEETREKEENLRNKRKQQKALKIEKQKNKTKRK

Homology

[Close]

BLAST of CmaCh15G007230 vs. Swiss-Prot
Match: MNME_SYNE7 (tRNA modification GTPase MnmE OS=Synechococcus elongatus (strain PCC 7942) GN=mnmE PE=3 SV=3)

HSP 1 Score: 399.8 bits (1026), Expect = 5.4e-110
Identity = 224/476 (47.06%), Postives = 310/476 (65.13%), Query Frame = 1


Query: 87  NSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHV 146
           +  TIAAI T++     +VGIVRLSG  A  I   +F          ++ Q PW   SH 
Sbjct: 5   SGDTIAAIATAIVPQQGSVGIVRLSGAAATEIARQIF---------QIAGQQPWE--SHR 64

Query: 147 VEYGVVLDQQG-----DVLTVPMLAPRSYTREDVIEIQCHGS--------EVCLRR---- 206
           + YG + D +      + L +PMLAPRSYTREDV+E+ CHG         ++C+R     
Sbjct: 65  ILYGYIRDPESGRLVDEALLLPMLAPRSYTREDVVELHCHGGLMPVQQTLQLCIRAGARL 124

Query: 207 ----EFTLRAFLNGRLDLSQAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIE 266
               EFTLRAFLNGRLDLSQAE++  LISA+S  AA AAL  +QG     ++ LR +C++
Sbjct: 125 AEPGEFTLRAFLNGRLDLSQAESIADLISAQSPQAAQAALGSLQGKLGHPIRQLRDRCLD 184

Query: 267 LLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPN 326
           +L E+EAR+DF+D++PPL+LE I  ++ A   +++  L TA+  +LL++G++IAIVGRPN
Sbjct: 185 ILAEVEARIDFEDDLPPLDLEAIAAQLTAAGADMQAILSTADRGELLRTGLKIAIVGRPN 244

Query: 327 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGV 386
           VGKSSLLNAWS+ +RAIVT++ GTTRD++E+ + V GIPV +LDTAGIRET D VE+IGV
Sbjct: 245 VGKSSLLNAWSRCDRAIVTDLPGTTRDLVESQLIVGGIPVQVLDTAGIRETSDQVEQIGV 304

Query: 387 ERSEAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSA 446
           ERS  AA  AD++++TI A  GW+ ED  + +++        S  PILLVINK D   S 
Sbjct: 305 ERSRRAAQSADLVLLTIDASAGWSAEDQTIWEAV--------SDRPILLVINKRD-RLSE 364

Query: 447 ANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQL 506
           A   AI++ +  F   V+T A   QGIE LE AI   +G  +  ++   W +NQRQ   L
Sbjct: 365 AERHAIALPQQEFKAIVWTAAAQQQGIEDLEAAILAAVGTGDLTSANWDWALNQRQVAAL 424

Query: 507 LRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
              + AL R++ +++ +LPLDFWT+DLR A+ ALG I+GE+I+E +L  IF +FCI
Sbjct: 425 TTAQTALRRVEETLQAQLPLDFWTIDLREAIAALGSITGEEIAESMLDLIFSRFCI 460

[Close]

BLAST of CmaCh15G007230 vs. Swiss-Prot
Match: MNME_SYNP6 (tRNA modification GTPase MnmE OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=mnmE PE=3 SV=2)

HSP 1 Score: 394.8 bits (1013), Expect = 1.7e-108
Identity = 222/476 (46.64%), Postives = 308/476 (64.71%), Query Frame = 1


Query: 87  NSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHV 146
           +  TIAAI T++     +VGIVRLSG  A  I   +F          ++ Q PW   SH 
Sbjct: 5   SGDTIAAIATAIVPQQGSVGIVRLSGAAATEIARQIF---------QIAGQQPWE--SHR 64

Query: 147 VEYGVVLDQQG-----DVLTVPMLAPRSYTREDVIEIQCHGS--------EVCLRR---- 206
           + YG + D +      + L +PMLAPRSYTREDV+E+ CHG         ++C+R     
Sbjct: 65  ILYGYIRDPESGRLVDEALLLPMLAPRSYTREDVVELHCHGGLMPVQQTLQLCIRAGARL 124

Query: 207 ----EFTLRAFLNGRLDLSQAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIE 266
               EFTLRAFLNGRLDLSQAE++  LISA+S  AA AAL  +QG     ++ LR +C++
Sbjct: 125 AEPGEFTLRAFLNGRLDLSQAESIADLISAQSPQAAQAALGSLQGKLGHPIRQLRDRCLD 184

Query: 267 LLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPN 326
           +L E+EAR+DF+D++PPL+LE I  ++ A   +++  L TA+  +LL++G++IAIVGRPN
Sbjct: 185 ILAEVEARIDFEDDLPPLDLEAIAAQLTAAGADMQAILSTADRGELLRTGLKIAIVGRPN 244

Query: 327 VGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGV 386
           VGKSSLLNAWS+ +RAIVT++ G TRD++E+ + V GIPV +LDTAGIRET D VE+IGV
Sbjct: 245 VGKSSLLNAWSRCDRAIVTDLPGRTRDLVESQLIVGGIPVQVLDTAGIRETSDQVEQIGV 304

Query: 387 ERSEAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSA 446
           ERS  AA  AD++++TI A  GW+ ED  + +++        S  PILLVINK D   S 
Sbjct: 305 ERSRRAAQSADLVLLTIDASAGWSAEDQTIWEAV--------SDRPILLVINKRD-RLSE 364

Query: 447 ANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQL 506
           A   AI++ +  F   V+T A   +GIE LE AI   +G  +  ++   W +NQRQ   L
Sbjct: 365 AERHAIALPQQEFKAIVWTAAAQQKGIEDLEAAILAAVGTGDLTSANWDWALNQRQVAAL 424

Query: 507 LRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
              + AL R++ +++ +LPLDFWT+DLR A+ ALG I+GE I+E +L  IF +FCI
Sbjct: 425 TTAQTALRRVEETLQAQLPLDFWTIDLREAIAALGSITGEGIAESMLDLIFSRFCI 460

[Close]

BLAST of CmaCh15G007230 vs. Swiss-Prot
Match: MNME_THEEB (tRNA modification GTPase MnmE OS=Thermosynechococcus elongatus (strain BP-1) GN=mnmE PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.4e-104
Identity = 214/473 (45.24%), Postives = 301/473 (63.64%), Query Frame = 1


Query: 90  TIAAIVTSMGGPPAAVGIVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEY 149
           TIAAI T++     ++GIVRLSG +AV I  SLF    K+         PW   SH + Y
Sbjct: 7   TIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFEAPGKQ---------PWE--SHRILY 66

Query: 150 GVVLDQQ-----GDVLTVPMLAPRSYTREDVIEIQCHGSEVCLRR--------------- 209
           G V D Q      + L + MLAPRSYTREDV+E  CHG  + ++R               
Sbjct: 67  GYVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQLCVAAGARLADP 126

Query: 210 -EFTLRAFLNGRLDLSQAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLT 269
            EFTLRAFLNGRLDL+QAE+V +L++A+ST AA  ALAG+ G  +  ++ +R  C+ LL 
Sbjct: 127 GEFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPLQQIRQTCLSLLA 186

Query: 270 EIEARLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGK 329
           EIEARLDF DE+PPL+   I E++  +  +VE  L TA    L+++G+++AIVGRPNVGK
Sbjct: 187 EIEARLDFTDELPPLDPAAIAEQIRQLQHQVEAFLATAERGALIRTGLKVAIVGRPNVGK 246

Query: 330 SSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERS 389
           SSLLNAWS+S+RAIVT++ GTTRD++E+ + V GIP+ +LDTAGIRETD++VE+IGV+RS
Sbjct: 247 SSLLNAWSRSDRAIVTDLPGTTRDIVESQLVVGGIPIQVLDTAGIRETDNLVEQIGVQRS 306

Query: 390 EAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANM 449
             AAL AD+I++ I A  GWT  D  + D +  K++   +   +L+V+NK D       +
Sbjct: 307 RQAALSADLILLVIDASQGWTAADQAIYDQLQLKQRRQQAPQSVLVVLNKADLLSETTEV 366

Query: 450 DAISINRDSFSKQVFTCAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRT 509
             I +        V   A++ +GIE LE AI  L+      A+   + +NQRQ   L + 
Sbjct: 367 KDIPLPIAPI-PTVLLSALSQRGIEQLEDAILHLVQGQGVSAANLDFAINQRQAGLLEQV 426

Query: 510 KEALGRLKSSIEEELPLDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
            ++L  + ++I+ +LPLDFWT+DL  A  ALG ++GE+++E VL+ IF +FCI
Sbjct: 427 HQSLNHVLAAIDAQLPLDFWTIDLHAAARALGTLTGEEVTESVLTEIFSRFCI 467

[Close]

BLAST of CmaCh15G007230 vs. Swiss-Prot
Match: MNME_SYNEL (tRNA modification GTPase MnmE OS=Synechococcus elongatus GN=mnmE PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 3.4e-104
Identity = 214/473 (45.24%), Postives = 301/473 (63.64%), Query Frame = 1


Query: 90  TIAAIVTSMGGPPAAVGIVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEY 149
           TIAAI T++     ++GIVRLSG +AV I  SLF    K+         PW   SH + Y
Sbjct: 7   TIAAIATAIVPQQGSIGIVRLSGAKAVAIAQSLFEAPGKQ---------PWE--SHRILY 66

Query: 150 GVVLDQQ-----GDVLTVPMLAPRSYTREDVIEIQCHGSEVCLRR--------------- 209
           G V D Q      + L + MLAPRSYTREDV+E  CHG  + ++R               
Sbjct: 67  GYVRDPQTKERVDEALLLLMLAPRSYTREDVVEFHCHGGLIPVQRVLQLCVAAGARLADP 126

Query: 210 -EFTLRAFLNGRLDLSQAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLT 269
            EFTLRAFLNGRLDL+QAE+V +L++A+ST AA  ALAG+ G  +  ++ +R  C+ LL 
Sbjct: 127 GEFTLRAFLNGRLDLTQAESVAELVAAQSTTAAQIALAGLTGKLARPLQQIRQTCLSLLA 186

Query: 270 EIEARLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGK 329
           EIEARLDF DE+PPL+   I E++  +  +VE  L TA    L+++G+++AIVGRPNVGK
Sbjct: 187 EIEARLDFTDELPPLDPAAIAEQIRQLQHQVEAFLATAERGALIRTGLKVAIVGRPNVGK 246

Query: 330 SSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERS 389
           SSLLNAWS+S+RAIVT++ GTTRD++E+ + V GIP+ +LDTAGIRETD++VE+IGV+RS
Sbjct: 247 SSLLNAWSRSDRAIVTDLPGTTRDIVESQLVVGGIPIQVLDTAGIRETDNLVEQIGVQRS 306

Query: 390 EAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANM 449
             AAL AD+I++ I A  GWT  D  + D +  K++   +   +L+V+NK D       +
Sbjct: 307 RQAALSADLILLVIDASQGWTAADQAIYDQLQLKQRRQQAPQSVLVVLNKADLLSETTEV 366

Query: 450 DAISINRDSFSKQVFTCAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRT 509
             I +        V   A++ +GIE LE AI  L+      A+   + +NQRQ   L + 
Sbjct: 367 KDIPLPIAPI-PTVLLSALSQRGIEQLEDAILHLVQGQGVSAANLDFAINQRQAGLLEQV 426

Query: 510 KEALGRLKSSIEEELPLDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
            ++L  + ++I+ +LPLDFWT+DL  A  ALG ++GE+++E VL+ IF +FCI
Sbjct: 427 HQSLNHVLAAIDAQLPLDFWTIDLHAAARALGTLTGEEVTESVLTEIFSRFCI 467

[Close]

BLAST of CmaCh15G007230 vs. Swiss-Prot
Match: MNME_ACAM1 (tRNA modification GTPase MnmE OS=Acaryochloris marina (strain MBIC 11017) GN=mnmE PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 5.8e-104
Identity = 216/474 (45.57%), Postives = 301/474 (63.50%), Query Frame = 1


Query: 89  STIAAIVTSMGGPPAAVGIVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVE 148
           +TIAAI T++     ++GIVRLSG  AV+I   LF    K++         W   SH V 
Sbjct: 4   TTIAAIATAIVPQQGSIGIVRLSGVEAVSIAKQLFQTPGKQQ---------WE--SHRVL 63

Query: 149 YGVV---LDQQ--GDVLTVPMLAPRSYTREDVIEIQCHGS--------EVCLRR------ 208
           YG +   L QQ   + L + MLAPRSYTREDV+E  CHG         E CL+       
Sbjct: 64  YGYIQQPLTQQIIDEGLLLLMLAPRSYTREDVVEFHCHGGMIAVQQVLEACLQAGAELAQ 123

Query: 209 --EFTLRAFLNGRLDLSQAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELL 268
             EFTLRAFLNGRLDL+QAE V  L+ A+S  AA AALAG+QG  +S ++ LR +C++ L
Sbjct: 124 PGEFTLRAFLNGRLDLTQAEGVADLVGARSPQAAQAALAGVQGKLASPIRELRQRCLDTL 183

Query: 269 TEIEARLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVG 328
            E+EAR+DF+D++PPL+   +  ++  +   ++  L TA+  +LL++G+ +AI+GRPNVG
Sbjct: 184 AEVEARVDFEDDLPPLDEAGVQAELQDIHATLQAILATADQGELLRNGLTVAIIGRPNVG 243

Query: 329 KSSLLNAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVER 388
           KSSLLNAW + +RAIVT++ GTTRDV+E+ + V GIP+ +LDTAGIRET+D VE+IGV R
Sbjct: 244 KSSLLNAWCRCDRAIVTDLPGTTRDVVESQLVVGGIPIQVLDTAGIRETEDQVEQIGVTR 303

Query: 389 SEAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAAN 448
           S  AA  AD++++TI A  GWT +D  L  +            P++L++NK+D  P    
Sbjct: 304 SHQAAQSADLVLLTIDASVGWTSDDQQLYQAF--------QDLPLILIVNKVDLVPQEQ- 363

Query: 449 MDAISINRDSFSKQVFTCAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLR 508
                +  ++ ++ V T A   QGI  LE AI E +   +  A+   W +NQRQ   L +
Sbjct: 364 ----VVYPEAIAQVVSTIAAQNQGISELETAILETVQTQSLKAANLDWAINQRQAAALQK 423

Query: 509 TKEALGRLKSSIEEELPLDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
            + AL  ++ +I ++LPLDFWT+DLRGA+ ALGEI+GEDI+E VL  IF +FCI
Sbjct: 424 AQAALEHVQGAIADQLPLDFWTIDLRGAIQALGEITGEDITESVLDRIFSRFCI 453

[Close]

BLAST of CmaCh15G007230 vs. TrEMBL
Match: A0A0A0KTK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396040 PE=3 SV=1)

HSP 1 Score: 901.4 bits (2328), Expect = 6.4e-259
Identity = 483/561 (86.10%), Postives = 505/561 (90.02%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHASG 60
           MALLPGFRHFI HF RTTPPMAFLFTHF TPISRPSS++ I   S+ VL KSLIKSH++G
Sbjct: 1   MALLPGFRHFIAHFYRTTPPMAFLFTHFSTPISRPSSIYSISKTSNHVLSKSLIKSHSTG 60

Query: 61  KKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIVG 120
           K+ TF L  DERL DSHAG EREQI+NSSTIAAIVTS+GGPPAAVGIVRLSGPRAVNIVG
Sbjct: 61  KENTFVLAPDERLGDSHAGTEREQIDNSSTIAAIVTSIGGPPAAVGIVRLSGPRAVNIVG 120

Query: 121 SLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDV----LTVPMLAPRSYTREDVI 180
           +LF PAAKKKGKN+S  HPWRPTSHVVEYGVVLDQQGDV    LTVPMLAPRSYTREDVI
Sbjct: 121 TLFFPAAKKKGKNLSL-HPWRPTSHVVEYGVVLDQQGDVIDEVLTVPMLAPRSYTREDVI 180

Query: 181 EIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGKLISAKSTAA 240
           E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENVGKLISAKSTAA
Sbjct: 181 ELQCHGSEVCLRRVLKACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLISAKSTAA 240

Query: 241 ADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVE 300
           ADAALAGIQGGFSSLVK LRTQCIELLTEIEARLDFDDEMPPL+L  +MEKVHAM+QEVE
Sbjct: 241 ADAALAGIQGGFSSLVKSLRTQCIELLTEIEARLDFDDEMPPLDLNIVMEKVHAMSQEVE 300

Query: 301 TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV 360
           TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV
Sbjct: 301 TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV 360

Query: 361 SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEEDTILLDSIL 420
           SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIM ISALDGWT EDTILL+ IL
Sbjct: 361 SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMAISALDGWTAEDTILLNRIL 420

Query: 421 AKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAIS 480
           +KKKSD S TPILLVINKIDCAPS   MDA+SINRDSFSKQVFTCAVTGQGI++LEMAIS
Sbjct: 421 SKKKSDESCTPILLVINKIDCAPS-PKMDAMSINRDSFSKQVFTCAVTGQGIQNLEMAIS 480

Query: 481 ELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALG 540
           EL+GLN TLASGRRWTVNQRQC QLLRTKEA  RLKSSIE+ELP DFWTVDLR AVLALG
Sbjct: 481 ELVGLNKTLASGRRWTVNQRQCVQLLRTKEAFTRLKSSIEDELPPDFWTVDLRDAVLALG 540

Query: 541 EISGEDISEEVLSNIFGKFCI 542
           EI GEDISEE+LSNIFGKFCI
Sbjct: 541 EICGEDISEEILSNIFGKFCI 559

[Close]

BLAST of CmaCh15G007230 vs. TrEMBL
Match: V4T2B8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003846mg PE=3 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 7.7e-196
Identity = 389/572 (68.01%), Postives = 439/572 (76.75%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPP-----MAFLFTHFHTPISRPSSL----FHIPNPSSPVLPK 60
           MALLP  R  ITH     PP     ++     FH P  R ++     F   + S P+   
Sbjct: 1   MALLPSLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNLSFSFSSSSKPITHN 60

Query: 61  SLIKSHASGKKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLS 120
            L    A+ K       +DERL   + G   E+     TIAAIVTS+GGPP AVGIVRLS
Sbjct: 61  PL----ATPKDNKLVFKKDERLVADN-GESEEKAATFRTIAAIVTSIGGPPGAVGIVRLS 120

Query: 121 GPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQG----DVLTVPMLAP 180
           GP AV+IVG +F P  KKK K+ S    WRPTSHVVEYGVVLD+ G    +VL VPMLAP
Sbjct: 121 GPMAVDIVGRVFKPVKKKKKKS-SGSVSWRPTSHVVEYGVVLDRHGIVVDEVLAVPMLAP 180

Query: 181 RSYTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGK 240
           RSYTREDV+E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENV K
Sbjct: 181 RSYTREDVVELQCHGSEVCLRRVLRACLEAGATLAQPGEFTLRAFLNGRLDLSQAENVEK 240

Query: 241 LISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEK 300
           LISAKS AAADAALAGIQGGFSSLV  +R +CIELLTEIEARLDFDDEMPPLNL  +M+K
Sbjct: 241 LISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLVMDK 300

Query: 301 VHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR 360
           +HAM+Q+VE A+ETANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR
Sbjct: 301 IHAMSQDVENAMETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR 360

Query: 361 DVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEE 420
           DV+EA+VTV G+PVTLLDTAGIRETDDIVEKIGVERSEA ALGADVIIMT+SA+DGWT E
Sbjct: 361 DVVEASVTVCGVPVTLLDTAGIRETDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSE 420

Query: 421 DTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINR--DSFSKQVFTCAVTG 480
           D+ LL+ I + KKS  S+TP++LVINKIDCAPSA+N      N+  +SF+  VFTCAVTG
Sbjct: 421 DSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN----EWNKVGNSFNDHVFTCAVTG 480

Query: 481 QGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWT 540
           QGI+ LE AI +++GL+   A GRRW VNQRQCEQL+RTKEAL RLKSSIEEELPLDFWT
Sbjct: 481 QGIQDLETAIMKIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWT 540

Query: 541 VDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
           +DLR A LALG+ISGEDISEEVLSNIFGKFCI
Sbjct: 541 IDLRDAALALGQISGEDISEEVLSNIFGKFCI 562

[Close]

BLAST of CmaCh15G007230 vs. TrEMBL
Match: E0CRH3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04970 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 8.5e-195
Identity = 384/577 (66.55%), Postives = 438/577 (75.91%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPS--SLFHIPNPSS--PVLPKSLIKS 60
           M  LP  RH I+H    +P ++       +P +R S   LF IP         P SL   
Sbjct: 1   MGHLPAIRHLISHL-HMSPRLSS-----SSPTTRSSLQPLFSIPTFQKLYSFFPPSLKPY 60

Query: 61  HASGKK-----------TTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAV 120
           H   K            TT  L +DERL       E  +  +++TIAAIVTS+GGPP+AV
Sbjct: 61  HTHSKTLVPHLHLTPNDTTLVLKKDERLGSRSVNQEHIEGTSTTTIAAIVTSLGGPPSAV 120

Query: 121 GIVRLSGPRAVNIVGSLFCPAAKKKGKNV-SQQHPWRPTSHVVEYGVVLDQQG----DVL 180
           GIVRLSGP AV IV  +F PA + KGK + S    WRPTSHVVEYGVVLD  G    +VL
Sbjct: 121 GIVRLSGPEAVAIVARVFRPARRNKGKTLGSGSGSWRPTSHVVEYGVVLDHHGNVVDEVL 180

Query: 181 TVPMLAPRSYTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLS 240
            +PMLAPRSYTREDV+E+QCHGSEVCLRR                EFTLRAFLNGRLDLS
Sbjct: 181 AIPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLESGARLAEPGEFTLRAFLNGRLDLS 240

Query: 241 QAENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLN 300
           QAENVGKLISAKS AAADAALAGIQGGFSSLV+ LR QCIELLTEIEARLDFDDEMPPL+
Sbjct: 241 QAENVGKLISAKSIAAADAALAGIQGGFSSLVRSLRIQCIELLTEIEARLDFDDEMPPLD 300

Query: 301 LETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVT 360
           L  IM+K+H+M+Q+VE ALETANYD+LLQSG+QIAI+GRPNVGKSSLLNAWSKSERAIVT
Sbjct: 301 LNLIMDKIHSMSQDVENALETANYDQLLQSGLQIAIIGRPNVGKSSLLNAWSKSERAIVT 360

Query: 361 EIAGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISA 420
           EIAGTTRDV+EA+V++ GIPVTLLDTAGIRETDDIVEKIGVERSEA A+ ADVIIMTISA
Sbjct: 361 EIAGTTRDVVEASVSIHGIPVTLLDTAGIRETDDIVEKIGVERSEAVAISADVIIMTISA 420

Query: 421 LDGWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFT 480
           LDGWT +DT L + I++ KK   S+TP++LV+NKIDCAPSA     + +  +SFSK +FT
Sbjct: 421 LDGWTSQDTKLFNRIISNKKFVESSTPVILVVNKIDCAPSACT--ELFMEGNSFSKHIFT 480

Query: 481 CAVTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELP 540
           CAVTGQGI  LE AI E++GLN   A GRRWTVNQRQCEQL+RTKEAL RL SSIEEE+P
Sbjct: 481 CAVTGQGISDLESAIIEIVGLNKIPAGGRRWTVNQRQCEQLVRTKEALARLISSIEEEMP 540

Query: 541 LDFWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
           LDFWT+DLR A LALG+ISGEDISEEVL+NIFGKFCI
Sbjct: 541 LDFWTIDLREAALALGQISGEDISEEVLTNIFGKFCI 569

[Close]

BLAST of CmaCh15G007230 vs. TrEMBL
Match: A0A061FGP2_THECC (TRNA modification GTPase OS=Theobroma cacao GN=TCM_034959 PE=3 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 2.7e-193
Identity = 380/568 (66.90%), Postives = 442/568 (77.82%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTT-PPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHAS 60
           MALLP  R  ITHF R T PP     +    P  + S LFH+      + P   + S  +
Sbjct: 1   MALLPSVRAIITHFYRPTKPPPRLPLSSLFFP-KKLSFLFHLSPKPQALKPLKPLAS--A 60

Query: 61  GKKTTFFLTRDERLEDSHAGIEREQIE---NSSTIAAIVTSMGGPPAAVGIVRLSGPRAV 120
            ++TTF    D+RL    +  + + I+   ++STIAAIVTS+GGPPAAVGIVRLSGP AV
Sbjct: 61  RQETTFVSNNDDRLVGFGSVNQGDAIKTQSSTSTIAAIVTSLGGPPAAVGIVRLSGPTAV 120

Query: 121 NIVGSLFCPAAKKKGKNVSQQH---PWRPTSHVVEYGVVLDQQG----DVLTVPMLAPRS 180
           +I G +F PA KKK +  S       WRPTSHVVEYGVVLD +G    +VL VPMLAP+S
Sbjct: 121 DIAGRVFFPAKKKKKQEKSFDSGSASWRPTSHVVEYGVVLDSRGNVVDEVLAVPMLAPKS 180

Query: 181 YTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGKLI 240
           YTREDV+E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENVGKLI
Sbjct: 181 YTREDVVELQCHGSEVCLRRVLKACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLI 240

Query: 241 SAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVH 300
           SAKS  AADAALAGIQGGF SLV+LLR QCIELLTEIEARLDF+DEMPPL+   +M+++H
Sbjct: 241 SAKSVGAADAALAGIQGGFCSLVRLLRGQCIELLTEIEARLDFEDEMPPLDFNLVMDRIH 300

Query: 301 AMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDV 360
           AM+Q+VE ALETANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVT+IAGTTRDV
Sbjct: 301 AMSQDVEHALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTDIAGTTRDV 360

Query: 361 IEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEEDT 420
           +EA+VTVSG+PVTLLDTAGIRETDDIVEK+GVERS A A+GADVIIMT+SALDGWT EDT
Sbjct: 361 VEASVTVSGVPVTLLDTAGIRETDDIVEKMGVERSVAVAMGADVIIMTVSALDGWTVEDT 420

Query: 421 ILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIE 480
            LL+ I + K+S  ++ P++L+INKIDCA SA + D +     SF+K VFTCA+TGQGI 
Sbjct: 421 KLLERIQSNKRS--TSIPMILLINKIDCASSACS-DWVDREAKSFTKHVFTCAITGQGIR 480

Query: 481 HLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLR 540
            LE +ISE++GLN   A GRRWTVNQRQCEQL+R KEA  RLKSSI+EELPLDFWT+DL+
Sbjct: 481 DLEKSISEIVGLNQIPAGGRRWTVNQRQCEQLMRAKEAFVRLKSSIKEELPLDFWTIDLK 540

Query: 541 GAVLALGEISGEDISEEVLSNIFGKFCI 542
            A LALG+ISGEDISEE+LSNIFGKFCI
Sbjct: 541 DAALALGQISGEDISEEILSNIFGKFCI 562

[Close]

BLAST of CmaCh15G007230 vs. TrEMBL
Match: B9GUJ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09320g PE=3 SV=2)

HSP 1 Score: 682.2 bits (1759), Expect = 6.1e-193
Identity = 379/562 (67.44%), Postives = 434/562 (77.22%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHAS- 60
           MALLP FR  ITHF +       L   F  P         + N S     K+L K HAS 
Sbjct: 1   MALLPVFRTIITHFFKPKTLNPSLSPLFQEPT--------VKNLSFLAKHKTLPKPHASL 60

Query: 61  GKKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIV 120
             KTT  L   ++      G + + I  S+TIAAIVTS+GGPPA+VGIVRLSGP AV I 
Sbjct: 61  NSKTTLLLNGQDQRFMGLNGTDDKSI--STTIAAIVTSVGGPPASVGIVRLSGPSAVEIA 120

Query: 121 GSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQG----DVLTVPMLAPRSYTREDV 180
             +F P  KKK K       W+PTSHVV+YGVVLD QG    +VL VPMLAPRSYTREDV
Sbjct: 121 ARVFKPMRKKKKKGFCV---WKPTSHVVDYGVVLDHQGNVVDEVLAVPMLAPRSYTREDV 180

Query: 181 IEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGKLISAKSTA 240
           +E+QCHG+EVCLRR                EFTLRAFLNGRLDLSQAENVGKLIS+KS A
Sbjct: 181 VELQCHGTEVCLRRVLRACIEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLISSKSVA 240

Query: 241 AADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEV 300
           AADAALAGIQGGF+SLVK LRTQCIELLTEIEARLDFDDEMPPL+L  IM+K+H+M++ V
Sbjct: 241 AADAALAGIQGGFASLVKSLRTQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHSMSENV 300

Query: 301 ETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVT 360
           E AL+TANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRD++EA++T
Sbjct: 301 ENALKTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDIVEASIT 360

Query: 361 VSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEEDTILLDSI 420
           V GIPV LLDTAGIR TDD+VEKIGVERSEA ALGADVI+MT+SALDGWT EDT LL+ I
Sbjct: 361 VGGIPVILLDTAGIRVTDDVVEKIGVERSEAVALGADVIVMTVSALDGWTPEDTELLNRI 420

Query: 421 LAKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAI 480
           ++KKKS GS TP++LV+NKIDC+ S  + + +     SFSK VFTCA+TGQGI+ LEMAI
Sbjct: 421 VSKKKSVGSFTPMILVVNKIDCSLSLCS-EWVDRGGGSFSKHVFTCAITGQGIQDLEMAI 480

Query: 481 SELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLRGAVLAL 540
           SE++GLN   A G +WTVN RQCEQL+R KEAL RLKSSIEEE+PLDFWT+DLR A LAL
Sbjct: 481 SEIVGLNKIPAGGLKWTVNHRQCEQLVRMKEALVRLKSSIEEEMPLDFWTIDLRDAALAL 540

Query: 541 GEISGEDISEEVLSNIFGKFCI 542
           G+ISGE+ISEE+LSNIFGKFCI
Sbjct: 541 GQISGENISEEILSNIFGKFCI 548

[Close]

BLAST of CmaCh15G007230 vs. TAIR10
Match: AT1G78010.1 (AT1G78010.1 tRNA modification GTPase, putative)

HSP 1 Score: 611.7 bits (1576), Expect = 5.1e-175
Identity = 349/572 (61.01%), Postives = 418/572 (73.08%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHA-S 60
           M  L  FR    +  R   P+         PIS+  +L  +   SSP    SL+K  A S
Sbjct: 1   MVSLLCFRSVGVYLLRQATPIITRGGRISRPISK--NLCFVLFSSSP--KTSLLKPRAQS 60

Query: 61  GKKTTFFLTRDERL--------EDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLS 120
            +  +     DER+        +D+   ++R Q  +SSTI AIVT +GGPP AVGIVRLS
Sbjct: 61  SENNSLVFKGDERVVGLVGKVVDDAFDKVDRFQ--SSSTIVAIVTPIGGPPGAVGIVRLS 120

Query: 121 GPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQG----DVLTVPMLAP 180
           GP+AV +   +F  +AKK  K  S    WRP SH VEYG V+D  G    +VL VPMLAP
Sbjct: 121 GPKAVEVARRVF-RSAKKTKKKESDSDTWRPKSHFVEYGAVVDSNGNVVDEVLAVPMLAP 180

Query: 181 RSYTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGK 240
           RSYTREDV+E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENV K
Sbjct: 181 RSYTREDVVELQCHGSEVCLRRVLRTCVEAGARLAEPGEFTLRAFLNGRLDLSQAENVEK 240

Query: 241 LISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEK 300
           LISAKS+AAADAAL GIQGGFSSLVK LR QCIELLTEIEARLDF+DEMPPL++E+++ K
Sbjct: 241 LISAKSSAAADAALEGIQGGFSSLVKSLRAQCIELLTEIEARLDFEDEMPPLDIESVINK 300

Query: 301 VHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR 360
           + +M+Q+VE+AL+TANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTE+AGTTR
Sbjct: 301 ITSMSQDVESALDTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTR 360

Query: 361 DVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEE 420
           DV+EANVTV G+P+TLLDTAGIRET+DIVEKIGVERSE AA  ADVIIM +SA++GWTEE
Sbjct: 361 DVVEANVTVRGVPITLLDTAGIRETNDIVEKIGVERSETAAKVADVIIMAVSAVEGWTEE 420

Query: 421 DTILLDSILAKKKSDGSTTPILLVINKIDCAP--SAANMDAISINRDSFSKQVFTCAVTG 480
           DT LL  I + K       P++LV+NKIDCAP  S   ++      + F K VFT AVTG
Sbjct: 421 DTELLRKIQSDK-------PMILVMNKIDCAPPGSCDQLEDQRKKEEVFHKSVFTSAVTG 480

Query: 481 QGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWT 540
           QGIE LE AI E++GL+     G +WTVNQRQCEQL+RTKEAL RL+ +IE+E+P+DFWT
Sbjct: 481 QGIEELEDAILEILGLDRVPTGGHQWTVNQRQCEQLVRTKEALVRLREAIEDEIPIDFWT 540

Query: 541 VDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
           ++LR A L+L +ISG+D+SEEVLS+IF KFCI
Sbjct: 541 IELREAALSLAQISGQDVSEEVLSSIFAKFCI 558

[Close]

BLAST of CmaCh15G007230 vs. TAIR10
Match: AT3G12080.1 (AT3G12080.1 GTP-binding family protein)

HSP 1 Score: 84.3 bits (207), Expect = 2.8e-16
Identity = 60/176 (34.09%), Postives = 94/176 (53.41%), Query Frame = 1


Query: 298 IAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVT-VSGIPVTLLDTAGIRET 357
           IAI+GRPNVGKSS+LNA  + +R IV+ ++GTTRD I+A  T   G    L+DTAGIR+ 
Sbjct: 371 IAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFRLIDTAGIRKK 430

Query: 358 DDI------VEKIGVERSEAAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTT 417
             +       E + V R+  A   +DV+ + I A+   TE+D  + + I  + K      
Sbjct: 431 SSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDLKIAERIEREGKG----- 490

Query: 418 PILLVINKIDCAPSAANMDAISINRD--------SFSKQVFTCAVTGQGIEHLEMA 459
             L+V+NK D  P+     A     D         ++  V++ A+TG  ++++ +A
Sbjct: 491 -CLVVVNKWDTIPNKNQETAAHYEDDVREKLRSLKWAPIVYSTAITGHSVDNIVVA 540

[Close]

BLAST of CmaCh15G007230 vs. TAIR10
Match: AT5G39960.1 (AT5G39960.1 GTP binding;GTP binding)

HSP 1 Score: 59.7 bits (143), Expect = 7.5e-09
Identity = 60/231 (25.97%), Postives = 113/231 (48.92%), Query Frame = 1


Query: 203 LSQAENVGKLISAKSTAAA-----DAALAGIQG-GFSSLVKLLRT----QCIELLTEIEA 262
           ++++E++G L    S A A       A++   G G ++L ++LR       +E+L +I +
Sbjct: 238 MNKSESIGSLDEVASEALALGFGEPIAISAETGLGMTTLYEVLRPLLEDYTVEMLNDIGS 297

Query: 263 RLDFDDEMPPLNLETIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLL 322
           +   DD +   NL          + E++ +          +  +Q+AIVG+PNVGKS+LL
Sbjct: 298 Q---DDVLTDENL----------SDEIDES----------KLPLQLAIVGKPNVGKSTLL 357

Query: 323 NAWSKSERAIVTEIAGTTRDVIEANVTVSGIPVTLLDTAG---IRETDDIVEKIGVERSE 382
           NA  + ER +V   AG TRD +       G  V L+DTAG     E D     + + +S 
Sbjct: 358 NALLEEERVLVGPEAGLTRDAVRVQFEFQGRTVYLVDTAGWLERTERDKGPASLSIMQSR 417

Query: 383 AAALGADVIIMTISALDGWTEEDTILLDSILAKKKSDGSTTPILLVINKID 421
            + + A VI + + A +    + ++    ++  +++      +++++NK+D
Sbjct: 418 KSLMRAHVIALVLDAEEIIKAKCSMTHSEVVIARRAVEEGRGLVVIVNKMD 445

[Close]

BLAST of CmaCh15G007230 vs. NCBI nr
Match: gi|449445112|ref|XP_004140317.1| (PREDICTED: probable tRNA modification GTPase MnmE [Cucumis sativus])

HSP 1 Score: 901.4 bits (2328), Expect = 9.2e-259
Identity = 483/561 (86.10%), Postives = 505/561 (90.02%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHASG 60
           MALLPGFRHFI HF RTTPPMAFLFTHF TPISRPSS++ I   S+ VL KSLIKSH++G
Sbjct: 1   MALLPGFRHFIAHFYRTTPPMAFLFTHFSTPISRPSSIYSISKTSNHVLSKSLIKSHSTG 60

Query: 61  KKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIVG 120
           K+ TF L  DERL DSHAG EREQI+NSSTIAAIVTS+GGPPAAVGIVRLSGPRAVNIVG
Sbjct: 61  KENTFVLAPDERLGDSHAGTEREQIDNSSTIAAIVTSIGGPPAAVGIVRLSGPRAVNIVG 120

Query: 121 SLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDV----LTVPMLAPRSYTREDVI 180
           +LF PAAKKKGKN+S  HPWRPTSHVVEYGVVLDQQGDV    LTVPMLAPRSYTREDVI
Sbjct: 121 TLFFPAAKKKGKNLSL-HPWRPTSHVVEYGVVLDQQGDVIDEVLTVPMLAPRSYTREDVI 180

Query: 181 EIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGKLISAKSTAA 240
           E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENVGKLISAKSTAA
Sbjct: 181 ELQCHGSEVCLRRVLKACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLISAKSTAA 240

Query: 241 ADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVE 300
           ADAALAGIQGGFSSLVK LRTQCIELLTEIEARLDFDDEMPPL+L  +MEKVHAM+QEVE
Sbjct: 241 ADAALAGIQGGFSSLVKSLRTQCIELLTEIEARLDFDDEMPPLDLNIVMEKVHAMSQEVE 300

Query: 301 TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV 360
           TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV
Sbjct: 301 TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV 360

Query: 361 SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEEDTILLDSIL 420
           SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIM ISALDGWT EDTILL+ IL
Sbjct: 361 SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMAISALDGWTAEDTILLNRIL 420

Query: 421 AKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAIS 480
           +KKKSD S TPILLVINKIDCAPS   MDA+SINRDSFSKQVFTCAVTGQGI++LEMAIS
Sbjct: 421 SKKKSDESCTPILLVINKIDCAPS-PKMDAMSINRDSFSKQVFTCAVTGQGIQNLEMAIS 480

Query: 481 ELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALG 540
           EL+GLN TLASGRRWTVNQRQC QLLRTKEA  RLKSSIE+ELP DFWTVDLR AVLALG
Sbjct: 481 ELVGLNKTLASGRRWTVNQRQCVQLLRTKEAFTRLKSSIEDELPPDFWTVDLRDAVLALG 540

Query: 541 EISGEDISEEVLSNIFGKFCI 542
           EI GEDISEE+LSNIFGKFCI
Sbjct: 541 EICGEDISEEILSNIFGKFCI 559

[Close]

BLAST of CmaCh15G007230 vs. NCBI nr
Match: gi|659121060|ref|XP_008460482.1| (PREDICTED: probable tRNA modification GTPase MnmE [Cucumis melo])

HSP 1 Score: 901.4 bits (2328), Expect = 9.2e-259
Identity = 481/561 (85.74%), Postives = 504/561 (89.84%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPPMAFLFTHFHTPISRPSSLFHIPNPSSPVLPKSLIKSHASG 60
           MALLPGFRHFI HF RTTPPMAFL+THF TPISRPSSL+ I   S+ VL KSLIKSH++ 
Sbjct: 1   MALLPGFRHFIAHFYRTTPPMAFLYTHFSTPISRPSSLYSISKTSNHVLSKSLIKSHSTA 60

Query: 61  KKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLSGPRAVNIVG 120
           K+ TF L  DERL DSH GIEREQIENSSTIAAIVTS+GGPPAAVGIVRLSGPRAVNIVG
Sbjct: 61  KENTFLLAPDERLADSHTGIEREQIENSSTIAAIVTSIGGPPAAVGIVRLSGPRAVNIVG 120

Query: 121 SLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDV----LTVPMLAPRSYTREDVI 180
           +LFCPAAKKKGKN+S+ HPWRPTSHVVEYGVVLDQQGDV    LTVPMLAPRSYTREDVI
Sbjct: 121 TLFCPAAKKKGKNLSR-HPWRPTSHVVEYGVVLDQQGDVIDEVLTVPMLAPRSYTREDVI 180

Query: 181 EIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGKLISAKSTAA 240
           E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENVGKLISAKSTAA
Sbjct: 181 ELQCHGSEVCLRRVLKACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLISAKSTAA 240

Query: 241 ADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVE 300
           ADAALA IQGGFSSLVKLLR QCIELLTEIEARLDFDDEMPPL+L  +MEKV AM+QEVE
Sbjct: 241 ADAALAAIQGGFSSLVKLLRAQCIELLTEIEARLDFDDEMPPLDLNVVMEKVQAMSQEVE 300

Query: 301 TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV 360
           TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV
Sbjct: 301 TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV 360

Query: 361 SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEEDTILLDSIL 420
           SGIPVTLLDTAGIRETDDIVEKIGVERSEAAA GADVIIM ISA DGWTEEDTILL+ IL
Sbjct: 361 SGIPVTLLDTAGIRETDDIVEKIGVERSEAAAHGADVIIMAISAPDGWTEEDTILLNRIL 420

Query: 421 AKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAIS 480
           +KKKSD S  PILLV+NKIDCAPS  NMDA+SINRDSFSKQVFTCAVTGQGI++LEMAIS
Sbjct: 421 SKKKSDESCIPILLVVNKIDCAPS-PNMDAMSINRDSFSKQVFTCAVTGQGIQNLEMAIS 480

Query: 481 ELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALG 540
           EL+GLN TLASGRRWTVNQRQCEQLLRTKEA  RLKSSIE+ELP DFWTVDLR AVLALG
Sbjct: 481 ELVGLNKTLASGRRWTVNQRQCEQLLRTKEAFTRLKSSIEDELPPDFWTVDLRAAVLALG 540

Query: 541 EISGEDISEEVLSNIFGKFCI 542
           EI GEDISEE+LSNIFGKFCI
Sbjct: 541 EICGEDISEEILSNIFGKFCI 559

[Close]

BLAST of CmaCh15G007230 vs. NCBI nr
Match: gi|568837263|ref|XP_006472646.1| (PREDICTED: tRNA modification GTPase MnmE isoform X3 [Citrus sinensis])

HSP 1 Score: 697.6 bits (1799), Expect = 2.0e-197
Identity = 393/572 (68.71%), Postives = 442/572 (77.27%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPP-----MAFLFTHFHTPISRPSSL----FHIPNPSSPVLPK 60
           MALLP  R  ITH     PP     ++     FH P  R ++     F   + S P+   
Sbjct: 1   MALLPSLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNLSFSFSSSSKPITLN 60

Query: 61  SLIKSHASGKKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLS 120
            L    A+ K  T    +DERL   + G   E+    STIAAIVTS+GGPP AVGIVRLS
Sbjct: 61  PL----ATPKDNTLVFKKDERLVADN-GESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLS 120

Query: 121 GPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQG----DVLTVPMLAP 180
           GP AV+IVG +F P  KKK K+ S    WRPTSHVVEYGVVLD+ G    +VL VPMLAP
Sbjct: 121 GPMAVDIVGRVFKPVKKKKKKS-SGSGSWRPTSHVVEYGVVLDRHGNVVDEVLAVPMLAP 180

Query: 181 RSYTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAENVGK 240
           RSYTREDV+E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAENV K
Sbjct: 181 RSYTREDVVELQCHGSEVCLRRVLRACLEAGATFAQPGEFTLRAFLNGRLDLSQAENVEK 240

Query: 241 LISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEK 300
           LISAKS AAADAALAGIQGGFSSLV  +R +CIELLTEIEARLDFDDEMPPLNL  +M+K
Sbjct: 241 LISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLVMDK 300

Query: 301 VHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR 360
           +HAM+Q+VE ALETANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR
Sbjct: 301 IHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTR 360

Query: 361 DVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTEE 420
           DVIEA+VTV G+PVTLLDTAGIR+TDDIVEKIGVERSEA ALGADVIIMT+SA+DGWT E
Sbjct: 361 DVIEASVTVCGVPVTLLDTAGIRKTDDIVEKIGVERSEAVALGADVIIMTVSAVDGWTSE 420

Query: 421 DTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINR--DSFSKQVFTCAVTG 480
           D+ LL+ I + KKS  S+TP++LVINKIDCAPSA+N      N+  +SF++ VFTCAVTG
Sbjct: 421 DSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN----EWNKVGNSFNEHVFTCAVTG 480

Query: 481 QGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWT 540
           QGI+ LE AI E++GL+   A GRRW VNQRQCEQL+RTKEAL RLKSSIEEELPLDFWT
Sbjct: 481 QGIQDLETAIMEIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLDFWT 540

Query: 541 VDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
           +DLR A LALG+ISGEDISEEVLSNIFGKFCI
Sbjct: 541 IDLRDAALALGQISGEDISEEVLSNIFGKFCI 562

[Close]

BLAST of CmaCh15G007230 vs. NCBI nr
Match: gi|1009136468|ref|XP_015885541.1| (PREDICTED: tRNA modification GTPase MnmE [Ziziphus jujuba])

HSP 1 Score: 696.8 bits (1797), Expect = 3.4e-197
Identity = 392/575 (68.17%), Postives = 442/575 (76.87%), Query Frame = 1


Query: 1   MALLPGFRHFIT--HFCR-TTPPMAFLFTHF-HTPISR--------PSSLFHIPNPSSPV 60
           MA LP  R   +  H  R TT  +A L  H  ++PIS         P  L H   P S  
Sbjct: 1   MAGLPAVRFLSSSRHSYRPTTSTIASLLAHLSNSPISTSTKPSLFFPPPLCHSTKPISSK 60

Query: 61  LPKSLIKSHASGKKTTFFLTRDERLEDSHAGI--EREQIENSSTIAAIVTSMGGPPAAVG 120
           +P    K+H + ++ T    RDERL D  +G     E  +++STIAAIVTS+GGPP AVG
Sbjct: 61  IPAP--KTHLTSRENTLVFKRDERLADGGSGSLNGNELTQSASTIAAIVTSIGGPPGAVG 120

Query: 121 IVRLSGPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDV----LTV 180
           IVRLSGP AV IVG +F PA KKK KN S  + WRPTSHVVEYGVV+D  GDV    L +
Sbjct: 121 IVRLSGPSAVGIVGLVFRPAGKKKKKNCSS-YSWRPTSHVVEYGVVVDPNGDVVDEVLAI 180

Query: 181 PMLAPRSYTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQA 240
           PMLAPRSYTREDV+E+QCHGSEVCL R                EFTLRAFLNGRLDLSQA
Sbjct: 181 PMLAPRSYTREDVVELQCHGSEVCLNRVLRACLDAGAKLAEPGEFTLRAFLNGRLDLSQA 240

Query: 241 ENVGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLE 300
           ENVGKLISAKS AAADAALAGIQGGFSSLVK LR QCIELLTEIEARLDFDDEMPPL+L 
Sbjct: 241 ENVGKLISAKSVAAADAALAGIQGGFSSLVKSLRMQCIELLTEIEARLDFDDEMPPLDLG 300

Query: 301 TIMEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEI 360
            IM K+ +M+Q+VE ALETANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTEI
Sbjct: 301 LIMNKIDSMSQDVEHALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEI 360

Query: 361 AGTTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALD 420
           AGTTRDV+EA+VTV+GIPVTLLDTAGIRETDDIVEKIGVERSE  A+ ADVIIMT+SALD
Sbjct: 361 AGTTRDVVEASVTVNGIPVTLLDTAGIRETDDIVEKIGVERSETVAMAADVIIMTVSALD 420

Query: 421 GWTEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCA 480
           GWT ED++LL+ I + KK  GS+TP++LVINKIDC  SA  M+ +    ++FSK V TCA
Sbjct: 421 GWTTEDSLLLNRIQSNKKLTGSSTPMILVINKIDCVKSAC-MEEVHKYGNAFSKHVLTCA 480

Query: 481 VTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLD 540
           VTGQGI+ LEM ISE++GLN     GRRWTVNQRQCEQL+RTKEA   LKSSI E++PLD
Sbjct: 481 VTGQGIKELEMTISEIVGLNRVPKGGRRWTVNQRQCEQLVRTKEAFTSLKSSIAEQIPLD 540

Query: 541 FWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
           FWT+DLR A LALG+ISGEDISEEVLSNIFGKFCI
Sbjct: 541 FWTIDLRDAALALGQISGEDISEEVLSNIFGKFCI 571

[Close]

BLAST of CmaCh15G007230 vs. NCBI nr
Match: gi|985440720|ref|XP_015384141.1| (PREDICTED: tRNA modification GTPase MnmE isoform X2 [Citrus sinensis])

HSP 1 Score: 696.0 bits (1795), Expect = 5.9e-197
Identity = 393/575 (68.35%), Postives = 442/575 (76.87%), Query Frame = 1


Query: 1   MALLPGFRHFITHFCRTTPP-----MAFLFTHFHTPISRPSSL----FHIPNPSSPVLPK 60
           MALLP  R  ITH     PP     ++     FH P  R ++     F   + S P+   
Sbjct: 1   MALLPSLRSVITHQLHHRPPPPPPLLSIASFLFHKPKLRRTTCKNLSFSFSSSSKPITLN 60

Query: 61  SLIKSHASGKKTTFFLTRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLS 120
            L    A+ K  T    +DERL   + G   E+    STIAAIVTS+GGPP AVGIVRLS
Sbjct: 61  PL----ATPKDNTLVFKKDERLVADN-GESEEKAGTFSTIAAIVTSIGGPPGAVGIVRLS 120

Query: 121 GPRAVNIVGSLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDV-------LTVPM 180
           GP AV+IVG +F P  KKK K+ S    WRPTSHVVEYGVVLD+ G+V       L VPM
Sbjct: 121 GPMAVDIVGRVFKPVKKKKKKS-SGSGSWRPTSHVVEYGVVLDRHGNVVDEMGWVLAVPM 180

Query: 181 LAPRSYTREDVIEIQCHGSEVCLRR----------------EFTLRAFLNGRLDLSQAEN 240
           LAPRSYTREDV+E+QCHGSEVCLRR                EFTLRAFLNGRLDLSQAEN
Sbjct: 181 LAPRSYTREDVVELQCHGSEVCLRRVLRACLEAGATFAQPGEFTLRAFLNGRLDLSQAEN 240

Query: 241 VGKLISAKSTAAADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETI 300
           V KLISAKS AAADAALAGIQGGFSSLV  +R +CIELLTEIEARLDFDDEMPPLNL  +
Sbjct: 241 VEKLISAKSVAAADAALAGIQGGFSSLVTSVRAKCIELLTEIEARLDFDDEMPPLNLNLV 300

Query: 301 MEKVHAMAQEVETALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAG 360
           M+K+HAM+Q+VE ALETANYDKLLQSG+QIAIVGRPNVGKSSLLNAWSKSERAIVTEIAG
Sbjct: 301 MDKIHAMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAG 360

Query: 361 TTRDVIEANVTVSGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGW 420
           TTRDVIEA+VTV G+PVTLLDTAGIR+TDDIVEKIGVERSEA ALGADVIIMT+SA+DGW
Sbjct: 361 TTRDVIEASVTVCGVPVTLLDTAGIRKTDDIVEKIGVERSEAVALGADVIIMTVSAVDGW 420

Query: 421 TEEDTILLDSILAKKKSDGSTTPILLVINKIDCAPSAANMDAISINR--DSFSKQVFTCA 480
           T ED+ LL+ I + KKS  S+TP++LVINKIDCAPSA+N      N+  +SF++ VFTCA
Sbjct: 421 TSEDSELLNRIQSNKKSTESSTPMILVINKIDCAPSASN----EWNKVGNSFNEHVFTCA 480

Query: 481 VTGQGIEHLEMAISELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLD 540
           VTGQGI+ LE AI E++GL+   A GRRW VNQRQCEQL+RTKEAL RLKSSIEEELPLD
Sbjct: 481 VTGQGIQDLETAIMEIVGLHQIPAGGRRWAVNQRQCEQLMRTKEALVRLKSSIEEELPLD 540

Query: 541 FWTVDLRGAVLALGEISGEDISEEVLSNIFGKFCI 542
           FWT+DLR A LALG+ISGEDISEEVLSNIFGKFCI
Sbjct: 541 FWTIDLRDAALALGQISGEDISEEVLSNIFGKFCI 565

The following BLAST results are available for this feature:

BLAST of CmaCh15G007230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MNME_SYNE7	5.4e-110	47.06	tRNA modification GTPase MnmE OS=Synechococcus elongatus (strain PCC 7942) GN=mn...	[more]
MNME_SYNP6	1.7e-108	46.64	tRNA modification GTPase MnmE OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301...	[more]
MNME_THEEB	3.4e-104	45.24	tRNA modification GTPase MnmE OS=Thermosynechococcus elongatus (strain BP-1) GN=...	[more]
MNME_SYNEL	3.4e-104	45.24	tRNA modification GTPase MnmE OS=Synechococcus elongatus GN=mnmE PE=3 SV=1	[more]
MNME_ACAM1	5.8e-104	45.57	tRNA modification GTPase MnmE OS=Acaryochloris marina (strain MBIC 11017) GN=mnm...	[more]

BLAST of CmaCh15G007230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTK4_CUCSA	6.4e-259	86.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396040 PE=3 SV=1	[more]
V4T2B8_9ROSI	7.7e-196	68.01	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003846mg PE=3 SV=1	[more]
E0CRH3_VITVI	8.5e-195	66.55	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04970 PE=3 SV=...	[more]
A0A061FGP2_THECC	2.7e-193	66.90	TRNA modification GTPase OS=Theobroma cacao GN=TCM_034959 PE=3 SV=1	[more]
B9GUJ9_POPTR	6.1e-193	67.44	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09320g PE=3 SV=2	[more]

BLAST of CmaCh15G007230 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78010.1	5.1e-175	61.01	tRNA modification GTPase, putative	[more]
AT3G12080.1	2.8e-16	34.09	GTP-binding family protein	[more]
AT5G39960.1	7.5e-09	25.97	GTP binding;GTP binding	[more]

BLAST of CmaCh15G007230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445112\|ref\|XP_004140317.1\|	9.2e-259	86.10	PREDICTED: probable tRNA modification GTPase MnmE [Cucumis sativus]	[more]
gi\|659121060\|ref\|XP_008460482.1\|	9.2e-259	85.74	PREDICTED: probable tRNA modification GTPase MnmE [Cucumis melo]	[more]
gi\|568837263\|ref\|XP_006472646.1\|	2.0e-197	68.71	PREDICTED: tRNA modification GTPase MnmE isoform X3 [Citrus sinensis]	[more]
gi\|1009136468\|ref\|XP_015885541.1\|	3.4e-197	68.17	PREDICTED: tRNA modification GTPase MnmE [Ziziphus jujuba]	[more]
gi\|985440720\|ref\|XP_015384141.1\|	5.9e-197	68.35	PREDICTED: tRNA modification GTPase MnmE isoform X2 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004520	GTPase_MnmE
IPR005225	Small_GTP-bd_dom
IPR006073	GTP_binding_domain
IPR018948	GTP-bd_TrmE_N
IPR025867	MnmE_helical
IPR027266	TrmE/GcvT_dom1
IPR027368	MnmE_dom2
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006400	tRNA modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006400	tRNA modification
biological_process	GO:0006897	endocytosis
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G007230.1	CmaCh15G007230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004520	tRNA modification GTPase MnmE	HAMAP	MF_00379	GTPase_MnmE	coord: 89..544 score: 27
IPR004520	tRNA modification GTPase MnmE	TIGRFAMs	TIGR00450	TIGR00450	coord: 103..541 score: 6.9
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 295..454 score: 3.9
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 297..418 score: 4.3
IPR018948	GTP-binding protein TrmE, N-terminal	PFAM	PF10396	TrmE_N	coord: 90..188 score: 3.3
IPR025867	MnmE, helical domain	PFAM	PF12631	MnmE_helical	coord: 203..540 score: 1.1
IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1	GENE3D	G3DSA:3.30.1360.120		coord: 83..200 score: 1.6
IPR027368	tRNA modification GTPase MnmE domain 2	GENE3D	G3DSA:1.20.120.430		coord: 326..350 score: 2.6E-44coord: 473..541 score: 2.6E-44coord: 201..262 score: 2.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 277..325 score: 5.8E-7coord: 366..463 score: 4.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 169..250 score: 7.96E-39coord: 283..459 score: 7.96
None	No IPR available	unknown	Coil	Coil	coord: 549..629 scor
None	No IPR available	PANTHER	PTHR11649	MSS1/TRME-RELATED GTP-BINDING PROTEIN	coord: 92..541 score: 3.4E
None	No IPR available	PANTHER	PTHR11649:SF56	TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL	coord: 92..541 score: 3.4E
None	No IPR available	unknown	SSF103025	Folate-binding domain	coord: 89..200 score: 1.41

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G007230	Cucsa.034510	Cucumber (Gy14) v1	cgycmaB0019
CmaCh15G007230	Cla002149	Watermelon (97103) v1	cmawmB263
CmaCh15G007230	Csa5G396040	Cucumber (Chinese Long) v2	cmacuB293
CmaCh15G007230	MELO3C022795	Melon (DHL92) v3.5.1	cmameB252
CmaCh15G007230	ClCG03G008990	Watermelon (Charleston Gray)	cmawcgB261
CmaCh15G007230	CSPI05G14530	Wild cucumber (PI 183967)	cmacpiB297
CmaCh15G007230	CmoCh15G007440	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G007230	Lsi09G009610	Bottle gourd (USVL1VR-Ls)	cmalsiB268
CmaCh15G007230	Cp4.1LG13g05110	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G007230	MELO3C022795.2	Melon (DHL92) v3.6.1	cmamedB287
CmaCh15G007230	CsaV3_5G023620	Cucumber (Chinese Long) v3	cmacucB0343
CmaCh15G007230	Cla97C03G060180	Watermelon (97103) v2	cmawmbB300
CmaCh15G007230	Bhi12G001105	Wax gourd	cmawgoB0373
CmaCh15G007230	CsGy5G014490	Cucumber (Gy14) v2	cgybcmaB600
CmaCh15G007230	Carg01485	Silver-seed gourd	carcmaB1148

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G007230	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G007230	Cucurbita pepo (Zucchini)	cmacpeB325
CmaCh15G007230	Bottle gourd (USVL1VR-Ls)	cmalsiB282
CmaCh15G007230	Cucumber (Gy14) v2	cgybcmaB489
CmaCh15G007230	Silver-seed gourd	carcmaB0737
CmaCh15G007230	Silver-seed gourd	carcmaB0941
CmaCh15G007230	Cucumber (Chinese Long) v3	cmacucB0338
CmaCh15G007230	Watermelon (97103) v2	cmawmbB298
CmaCh15G007230	Wax gourd	cmawgoB0409
CmaCh15G007230	Cucurbita maxima (Rimu)	cmacmaB307
CmaCh15G007230	Cucurbita maxima (Rimu)	cmacmaB325
CmaCh15G007230	Cucurbita moschata (Rifu)	cmacmoB294
CmaCh15G007230	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G007230	Wild cucumber (PI 183967)	cmacpiB294
CmaCh15G007230	Cucumber (Chinese Long) v2	cmacuB289
CmaCh15G007230	Melon (DHL92) v3.5.1	cmameB282
CmaCh15G007230	Watermelon (Charleston Gray)	cmawcgB254
CmaCh15G007230	Watermelon (97103) v1	cmawmB264
CmaCh15G007230	Watermelon (97103) v1	cmawmB288