CmaCh15G006250 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTCTCTCAATACTTCCGACCACCCTTACTTTCCTTTACCACCTTATCATCCTTTCTGGCCGCCTCTCCCACCGCCGCAAAACCCTATTGCTCCGCCATATAAACCAGTTAGACCGCCACCGCCCCCTCGACAACCAACTGCTCCTCCGCCCCCACGTCAGCCAATTGTGCCCCCTCCGCCTCCACGTCAGCCGATTGCACCCTCTCCGCCGCCCCCTCAAAAGCCGAATGCTCCTCCGCCACCACGCAAGCCTATTGCGCCCCCGACTGCGCCTCCGCCCCCGCCCCCGCCCCCGCGCAAGCCAATTGTGCCTCCTCCTCCACCGTCTCGAAAGCCGACTGCTCCTCCGCCACCACGCAAGCCTATTGTGCCCACTCCGCCACCTCATAAGCCGACGGCTCCTCCGCCACCACGCAAGCCTATTGCGCCCACTCCGCCACCTCAGAAGCCGACTGCTCCTCCGCCCCCACGCAAGCCAATCGTGCCCCCTCCGCCACCGCAAAAGCCGACTGCTCCACCACCGCCACGTAAGCCAATAGTACCTCCACCTCCACATAAGCCAACTGCCCCTCCACCACCACGCAAACCAATTGCGCCTCCGCCTCCTAAAAAGCCAGTTGCTCCTCCACCACCACGTAAGCCAATTACACCACCACCACCACACAAGCCAATTGCTCCACCAACACCATACAAGCCCATATCTCCCCCATCTCCGATGCTTCCGCCGCCGCCGCCTCCTTCTAACCACCACCCGACAGTGATCATCATAGTGTGTGTGTCCTTGGGTGGGCTCTTCCTGCTTGCATTCATGGCAGCTGCCTTCTTCTGCTTCGTGAAAAAGAGAAAGGAGAAAACCATTGAAGAAACAGAGATCATCCACATTGACGAACACAGGAAGATCAAAGAGGCCAAAGTTGCAGGACCCCATGGATCATGCGAAACTATGGTGCTATCAGTTGAAGATGACATCCACATAACCGAAGAAATCGTACGGAGCGAGAAGGTTGGGGGAAAAGGGTTACATGGTACGCATGAAGCAGGTGATCCAAGCTCCATAGAAGAGCCACAGCCCGCATCTTCCTCTCATCAAAACCATTCGTGA ATGCCCTCTCTCAATACTTCCGACCACCCTTACTTTCCTTTACCACCTTATCATCCTTTCTGGCCGCCTCTCCCACCGCCGCAAAACCCTATTGCTCCGCCATATAAACCAGTTAGACCGCCACCGCCCCCTCGACAACCAACTGCTCCTCCGCCCCCACGTCAGCCAATTGTGCCCCCTCCGCCTCCACGTCAGCCGATTGCACCCTCTCCGCCGCCCCCTCAAAAGCCGAATGCTCCTCCGCCACCACGCAAGCCTATTGCGCCCCCGACTGCGCCTCCGCCCCCGCCCCCGCCCCCGCGCAAGCCAATTGTGCCTCCTCCTCCACCGTCTCGAAAGCCGACTGCTCCTCCGCCACCACGCAAGCCTATTGTGCCCACTCCGCCACCTCATAAGCCGACGGCTCCTCCGCCACCACGCAAGCCTATTGCGCCCACTCCGCCACCTCAGAAGCCGACTGCTCCTCCGCCCCCACGCAAGCCAATCGTGCCCCCTCCGCCACCGCAAAAGCCGACTGCTCCACCACCGCCACGTAAGCCAATAGTACCTCCACCTCCACATAAGCCAACTGCCCCTCCACCACCACGCAAACCAATTGCGCCTCCGCCTCCTAAAAAGCCAGTTGCTCCTCCACCACCACGTAAGCCAATTACACCACCACCACCACACAAGCCAATTGCTCCACCAACACCATACAAGCCCATATCTCCCCCATCTCCGATGCTTCCGCCGCCGCCGCCTCCTTCTAACCACCACCCGACAGTGATCATCATAGTGTGTGTGTCCTTGGGTGGGCTCTTCCTGCTTGCATTCATGGCAGCTGCCTTCTTCTGCTTCGTGAAAAAGAGAAAGGAGAAAACCATTGAAGAAACAGAGATCATCCACATTGACGAACACAGGAAGATCAAAGAGGCCAAAGTTGCAGGACCCCATGGATCATGCGAAACTATGGTGCTATCAGTTGAAGATGACATCCACATAACCGAAGAAATCGTACGGAGCGAGAAGGTTGGGGGAAAAGGGTTACATGGTACGCATGAAGCAGGTGATCCAAGCTCCATAGAAGAGCCACAGCCCGCATCTTCCTCTCATCAAAACCATTCGTGA ATGCCCTCTCTCAATACTTCCGACCACCCTTACTTTCCTTTACCACCTTATCATCCTTTCTGGCCGCCTCTCCCACCGCCGCAAAACCCTATTGCTCCGCCATATAAACCAGTTAGACCGCCACCGCCCCCTCGACAACCAACTGCTCCTCCGCCCCCACGTCAGCCAATTGTGCCCCCTCCGCCTCCACGTCAGCCGATTGCACCCTCTCCGCCGCCCCCTCAAAAGCCGAATGCTCCTCCGCCACCACGCAAGCCTATTGCGCCCCCGACTGCGCCTCCGCCCCCGCCCCCGCCCCCGCGCAAGCCAATTGTGCCTCCTCCTCCACCGTCTCGAAAGCCGACTGCTCCTCCGCCACCACGCAAGCCTATTGTGCCCACTCCGCCACCTCATAAGCCGACGGCTCCTCCGCCACCACGCAAGCCTATTGCGCCCACTCCGCCACCTCAGAAGCCGACTGCTCCTCCGCCCCCACGCAAGCCAATCGTGCCCCCTCCGCCACCGCAAAAGCCGACTGCTCCACCACCGCCACGTAAGCCAATAGTACCTCCACCTCCACATAAGCCAACTGCCCCTCCACCACCACGCAAACCAATTGCGCCTCCGCCTCCTAAAAAGCCAGTTGCTCCTCCACCACCACGTAAGCCAATTACACCACCACCACCACACAAGCCAATTGCTCCACCAACACCATACAAGCCCATATCTCCCCCATCTCCGATGCTTCCGCCGCCGCCGCCTCCTTCTAACCACCACCCGACAGTGATCATCATAGTGTGTGTGTCCTTGGGTGGGCTCTTCCTGCTTGCATTCATGGCAGCTGCCTTCTTCTGCTTCGTGAAAAAGAGAAAGGAGAAAACCATTGAAGAAACAGAGATCATCCACATTGACGAACACAGGAAGATCAAAGAGGCCAAAGTTGCAGGACCCCATGGATCATGCGAAACTATGGTGCTATCAGTTGAAGATGACATCCACATAACCGAAGAAATCGTACGGAGCGAGAAGGTTGGGGGAAAAGGGTTACATGGTACGCATGAAGCAGGTGATCCAAGCTCCATAGAAGAGCCACAGCCCGCATCTTCCTCTCATCAAAACCATTCGTGA MPSLNTSDHPYFPLPPYHPFWPPLPPPQNPIAPPYKPVRPPPPPRQPTAPPPPRQPIVPPPPPRQPIAPSPPPPQKPNAPPPPRKPIAPPTAPPPPPPPPRKPIVPPPPPSRKPTAPPPPRKPIVPTPPPHKPTAPPPPRKPIAPTPPPQKPTAPPPPRKPIVPPPPPQKPTAPPPPRKPIVPPPPHKPTAPPPPRKPIAPPPPKKPVAPPPPRKPITPPPPHKPIAPPTPYKPISPPSPMLPPPPPPSNHHPTVIIIVCVSLGGLFLLAFMAAAFFCFVKKRKEKTIEETEIIHIDEHRKIKEAKVAGPHGSCETMVLSVEDDIHITEEIVRSEKVGGKGLHGTHEAGDPSSIEEPQPASSSHQNHS
BLAST of CmaCh15G006250 vs. TrEMBL
Match: A0A0A0KFA4_CUCSA (Carboxypeptidase OS=Cucumis sativus GN=Csa_6G338160 PE=3 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 4.6e-100 Identity = 286/370 (77.30%), Postives = 307/370 (82.97%), Query Frame = 1
BLAST of CmaCh15G006250 vs. TrEMBL
Match: W9RTU8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023880 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 6.2e-28 Identity = 107/197 (54.31%), Postives = 132/197 (67.01%), Query Frame = 1
BLAST of CmaCh15G006250 vs. TrEMBL
Match: A0A061FI83_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035439 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.4e-26 Identity = 93/179 (51.96%), Postives = 118/179 (65.92%), Query Frame = 1
BLAST of CmaCh15G006250 vs. TrEMBL
Match: A0A0D2PPR5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G081600 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.8e-26 Identity = 106/216 (49.07%), Postives = 133/216 (61.57%), Query Frame = 1
BLAST of CmaCh15G006250 vs. TrEMBL
Match: W9QU73_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007306 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 2.2e-25 Identity = 92/176 (52.27%), Postives = 116/176 (65.91%), Query Frame = 1
BLAST of CmaCh15G006250 vs. TAIR10
Match: AT5G48920.1 (AT5G48920.1 tracheary element differentiation-related 7) HSP 1 Score: 73.9 bits (180), Expect = 2.2e-13 Identity = 84/180 (46.67%), Postives = 107/180 (59.44%), Query Frame = 1
BLAST of CmaCh15G006250 vs. NCBI nr
Match: gi|778714918|ref|XP_011657308.1| (PREDICTED: basic salivary proline-rich protein 2 [Cucumis sativus]) HSP 1 Score: 391.3 bits (1004), Expect = 1.8e-105 Identity = 294/389 (75.58%), Postives = 320/389 (82.26%), Query Frame = 1
BLAST of CmaCh15G006250 vs. NCBI nr
Match: gi|700192280|gb|KGN47484.1| (hypothetical protein Csa_6G338160 [Cucumis sativus]) HSP 1 Score: 372.9 bits (956), Expect = 6.6e-100 Identity = 286/370 (77.30%), Postives = 307/370 (82.97%), Query Frame = 1
BLAST of CmaCh15G006250 vs. NCBI nr
Match: gi|659131282|ref|XP_008465604.1| (PREDICTED: uncharacterized protein LOC103503244 [Cucumis melo]) HSP 1 Score: 182.6 bits (462), Expect = 1.3e-42 Identity = 97/130 (74.62%), Postives = 110/130 (84.62%), Query Frame = 1
BLAST of CmaCh15G006250 vs. NCBI nr
Match: gi|720087061|ref|XP_010244035.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Nelumbo nucifera]) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28 Identity = 152/306 (49.67%), Postives = 189/306 (61.76%), Query Frame = 1
BLAST of CmaCh15G006250 vs. NCBI nr
Match: gi|703103476|ref|XP_010097739.1| (hypothetical protein L484_023880 [Morus notabilis]) HSP 1 Score: 133.3 bits (334), Expect = 8.9e-28 Identity = 107/197 (54.31%), Postives = 132/197 (67.01%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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