CmaCh15G005000 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G005000
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pectate lyase
Location	Cma_Chr15 : 2246288 .. 2250192 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAAACAGAGTGTCTCATCTCAAGCTCAGCTCAGCTCAGCACAGATTTTTTTAATAGAAAGACAGAGAAAGAAGGAAGAAGCCCATCTTCCCTCTCATTGTCTGTGTCTCTGGATTATACCCTTTTAGAATAATGTGTTCATATCCCTAGAACAAATTTGGGTGACCCAAAAACCAGGTAGAAAAATGTCAGCAACAGGCTGCAAAAGGACACACCTAAAGGGCCAAGGAGGAGGAGGAGGAGGAGAGGGAATAGACAGAGGAAGGAGGACAGAGAATCATTTCTCTTTCAATTTCTCCTTCTTCTTCTTCTTCTTCCATCCATTCTACCTGGTTTTTGGGTCACTCTCCCATGTTCTTTCTTTTTGATTTCTCATTTTCCTAAGCTGTTTTGCAGATTCATTCATAGTTAAGTAGATTTGTTCTTGAGAATTTGAGAGAAAGGTACCTGAAAGTGAGTCTTGTTCTTGTTCTTGTTCTTGTTCAGATTAAGCAGTTCCCAACCAAATTTAGAAGCAGATATGTTTGCTACCACTGGCATTCTGTTCTTCATCTGGGTTTTGAGCTCCTCTCTGCCTCCTCCTGCCATGGCTACTTTCACCTTCAATCTCACTGTTCCTCATCTTCTTCCAGATCCTGAAACTGTTGCTTATCAAGTTCAGAGGTAACACATTTGTCTCAGTTTTGTTGGTTTTCACCAAGAAATGCTCCAAATGGGGTTTTCTGCACTTTTGCTCTTGTTGGCATTTTATCAAACACTTGCTGTGCATTACTGTATTGCTTAAGCTGCAGGGGGGGCTATTTCCATGGCCTTCCACATTAATCCATGGATATCTTTGTTTCTTGCAGGGCTGTGAACGATTCCTTTTCCCGGAGGCAAATGCTGTCCGTTAATTCGAAAGATCAATCCAGTTCCTGTCAAACTGGAAACCCTATCGACGATTGTTGGCGCTGTGACTCGAACTGGCAAGCCAATCGCCAACGACTCGCCGATTGCGGCATTGGATTCGGCCGAGACGCCATGGGAGGGAAGGGAGGTCAGATCTATGTTGTTACAGATTCCTCCGATTCCGACCCCGTGAACCCCCGCCCTGGAACTCTCCGCTACGCCGTGGTTCAAGACGAACCTCTCTGGATTGTTTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCCAATGTCCATATCACCGGGGGCGGTTGCGTCACACTTCAGTACATCTCGAATGTAATCATCCATAACATTAATATCCATCACTGTATTTCTACCGGCCACACCAACATCCGGTCGTCCCCCACGCACATCGGATACCGAGGAAAGTCCGATGGCGATGGAATCTCGATCTTCAGCTCGCGTAACATTTGGATCGATCATTGCTCACTCTCGTACTGTACCGATGGCTTAATCGACGCCATAATGGGATCCACCGGAATCACGATCTCCAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGACACGACGACGGCTACTCGCCGGATTCGGCTATGCAGGTGACTATTGCGTTTAATTTGTTCGGCGAGAAGCTCGTTCAGAGGATGCCCCGGTGCCGGCGAGGATACTTTCATGTCGTTAACAACGACTTCCGATCGTGGGAGATGTACGCCATCGGCGGAAGCGGCAGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCGGGGAATCCCAACGCGAAGGAGGTACGTTAACGTTATTCTCTCTCTTTATCCACCCTTTAATACAGTTCGGCGGCGCGTTTTAGGGACGCGCCGATGAAGGAAATTATTGATAGGAAAGGTAGATGGATTAAGGTAAATATCCTCAATGATTTCTAAATGATTTTCAGTTTTTTTATTTTAACTTATCATTAATTTAGTTTTTTTTTTTAATTTATCATTTTATTAATTAAAATTTATTTTTTTAACTAAATACTTTTATTTTGTGTATGGAGAAATTTTAAATTTTTGTTTATTTAAACCTATGTTTAGGGTATTAATTTTCAAATTATTTTATAATTTTTTAATGCATAAACAGTAATTTGTTATAAAGAAAGGGGCAGAACTGAAAATATCAAAAGTAAAAGGGCATGAGTAAAAAAAATTTTAAAGCGGTGATTTGACGGGACAGTCGTCAACCACAGTCTTGACGTTTTGGACTTTATTAAAAAAATTACTACAGTTCACACGTGGGAATAATTATTGGCTGTGAGGAAAAGTGCAAGTAGTGAAACGGTGCCGTTTTGGTGTGCAGGTGACGAAGCGCGTGGACACAAACGCGGGGGACTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAATGGAGCATTTTTTGTGCCGTCCGGGGAAGGAGTGAGCAACATGTACGTTAAAGCGTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGATCGCCTGACACTGAACGCCGGTGTCTTCGGCGGGGCCAGGTACTTTTCTCTCGTATGAAATTACCAAAATACCCTTGCTTTTAAAAAAAATTAAAATTGAGAGAATCTAGGCCCTTGAAAACCGCTCACTCATATATTTTATTGGAAAAGGAACCCATTGCTTTCCCATTAATGTCATCAATTTAAAGAGAATTAGAGATCAAATAATGTTGGTCTCTCTATAATAAAATAATATTCCCATATTTAAAAGAAAATTAGAGAGTAAAATTACCAAACACTTTGAATAATTGGATATAATTTCATAAATTTTTATTTGCATTATTGGATACTAATTCAAAATAGTAAAATTATCAGCTACATTTTAAAGGCTTCTTTAAATAATTTTTGTTTTCTTTCTTTTTTTGAGTAATATTAATTCAATTGTAAGGGGTAGAGTTGTCATTATGGATTTAATAAAGAAAAACTAAAAAATTAGTTGTCTTTTTAAGTTGTTAGCATAAAAAGGGTAAAAGGGGGAAGAGTAAGTGCATGTGTGTGTGTGTGATGACAGAGAAAAGAAGCAGTTGGGGCAAGTGGGGTTTTTTCATTAAATTAATATATTTATATATATATATATATATATATATATCAAGTTCTTGCTTTCCAGCCATTTCTTCTAGGGCCCACTCTCTTTGGAAATGGTGGGCCCTACATATCAACTTCAATTTTATATTATTTGGAAATGGTGGGACCCTAAAAAGTGGATTAAAAATTGTAGCTTTCTTAATTTTGTTTTTTATTAATTATTATTTTTTGCTACTATTTTATTTACATATATGAGTTTTATAATTACTATTATTATTATTCAAATTTAGTTTAAAATTATATTCGAAGCTAATTAAAATAAATTAAAGAAATCTAACAAGTCAAGTTTTTTTTTTTTACATCTTTTATTGTTACATTCATTATGTGATTGTGAAATTAGTGAACCAATAGCGATTAGAGAGATTCGGATGCTTTGTTGATCGTTTTATTCTCGACCCTCAGAATTTGTAGGATATTAAACTCAAACCGAACTATCTAACTATAATGTCGAGGTTGTGTCTTCTAAATCAGAGTCGAATCATTTGAATAGGAATCAGTTTTAACTAAAACTTTGTTCCAATTTCAATTGTGTAGGGAGAATAGACAGAGCTACTCTTATCCTGGAGACGAAAGCTCCTCTAGTTCGACTTCGAGTGGCAGCGATGGCGGTGGTGACTATTTCGGTATGATATTCGGTGGTGGCGGGGGGGTGAATATTGCACCACCACCACCATGTCTTTCAGTTGTCAACATGCTCATTCTAACTCTGCTTACTGTTTTAGTTGTGTACACGAACTATGATTCTGCTTTTTTATCATTGTAGTAATTGGAGAATTTCAGAAGAAAAAAAGATATATAAAACAAAAA

mRNA sequence

ATTGAAACAGAGTGTCTCATCTCAAGCTCAGCTCAGCTCAGCACAGATTTTTTTAATAGAAAGACAGAGAAAGAAGGAAGAAGCCCATCTTCCCTCTCATTGTCTGTGTCTCTGGATTATACCCTTTTAGAATAATGTGTTCATATCCCTAGAACAAATTTGGGTGACCCAAAAACCAGGTAGAAAAATGTCAGCAACAGGCTGCAAAAGGACACACCTAAAGGGCCAAGGAGGAGGAGGAGGAGGAGAGGGAATAGACAGAGGAAGGAGGACAGAGAATCATTTCTCTTTCAATTTCTCCTTCTTCTTCTTCTTCTTCCATCCATTCTACCTGGTTTTTGGATTAAGCAGTTCCCAACCAAATTTAGAAGCAGATATGTTTGCTACCACTGGCATTCTGTTCTTCATCTGGGTTTTGAGCTCCTCTCTGCCTCCTCCTGCCATGGCTACTTTCACCTTCAATCTCACTGTTCCTCATCTTCTTCCAGATCCTGAAACTGTTGCTTATCAAGTTCAGAGGGCTGTGAACGATTCCTTTTCCCGGAGGCAAATGCTGTCCGTTAATTCGAAAGATCAATCCAGTTCCTGTCAAACTGGAAACCCTATCGACGATTGTTGGCGCTGTGACTCGAACTGGCAAGCCAATCGCCAACGACTCGCCGATTGCGGCATTGGATTCGGCCGAGACGCCATGGGAGGGAAGGGAGGTCAGATCTATGTTGTTACAGATTCCTCCGATTCCGACCCCGTGAACCCCCGCCCTGGAACTCTCCGCTACGCCGTGGTTCAAGACGAACCTCTCTGGATTGTTTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCCAATGTCCATATCACCGGGGGCGGTTGCGTCACACTTCAGTACATCTCGAATGTAATCATCCATAACATTAATATCCATCACTGTATTTCTACCGGCCACACCAACATCCGGTCGTCCCCCACGCACATCGGATACCGAGGAAAGTCCGATGGCGATGGAATCTCGATCTTCAGCTCGCGTAACATTTGGATCGATCATTGCTCACTCTCGTACTGTACCGATGGCTTAATCGACGCCATAATGGGATCCACCGGAATCACGATCTCCAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGACACGACGACGGCTACTCGCCGGATTCGGCTATGCAGGTGACTATTGCGTTTAATTTGTTCGGCGAGAAGCTCGTTCAGAGGATGCCCCGGTGCCGGCGAGGATACTTTCATGTCGTTAACAACGACTTCCGATCGTGGGAGATGTACGCCATCGGCGGAAGCGGCAGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCGGGGAATCCCAACGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGACTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAATGGAGCATTTTTTGTGCCGTCCGGGGAAGGAGTGAGCAACATGTACGTTAAAGCGTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGATCGCCTGACACTGAACGCCGGTGTCTTCGGCGGGGCCAGGGAGAATAGACAGAGCTACTCTTATCCTGGAGACGAAAGCTCCTCTAGTTCGACTTCGAGTGGCAGCGATGGCGGTGGTGACTATTTCGGTATGATATTCGGTGGTGGCGGGGGGGTGAATATTGCACCACCACCACCATGTCTTTCAGTTGTCAACATGCTCATTCTAACTCTGCTTACTGTTTTAGTTGTGTACACGAACTATGATTCTGCTTTTTTATCATTGTAGTAATTGGAGAATTTCAGAAGAAAAAAAGATATATAAAACAAAAA

Coding sequence (CDS)

ATGTCAGCAACAGGCTGCAAAAGGACACACCTAAAGGGCCAAGGAGGAGGAGGAGGAGGAGAGGGAATAGACAGAGGAAGGAGGACAGAGAATCATTTCTCTTTCAATTTCTCCTTCTTCTTCTTCTTCTTCCATCCATTCTACCTGGTTTTTGGATTAAGCAGTTCCCAACCAAATTTAGAAGCAGATATGTTTGCTACCACTGGCATTCTGTTCTTCATCTGGGTTTTGAGCTCCTCTCTGCCTCCTCCTGCCATGGCTACTTTCACCTTCAATCTCACTGTTCCTCATCTTCTTCCAGATCCTGAAACTGTTGCTTATCAAGTTCAGAGGGCTGTGAACGATTCCTTTTCCCGGAGGCAAATGCTGTCCGTTAATTCGAAAGATCAATCCAGTTCCTGTCAAACTGGAAACCCTATCGACGATTGTTGGCGCTGTGACTCGAACTGGCAAGCCAATCGCCAACGACTCGCCGATTGCGGCATTGGATTCGGCCGAGACGCCATGGGAGGGAAGGGAGGTCAGATCTATGTTGTTACAGATTCCTCCGATTCCGACCCCGTGAACCCCCGCCCTGGAACTCTCCGCTACGCCGTGGTTCAAGACGAACCTCTCTGGATTGTTTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGATGGCCGCGGCGCCAATGTCCATATCACCGGGGGCGGTTGCGTCACACTTCAGTACATCTCGAATGTAATCATCCATAACATTAATATCCATCACTGTATTTCTACCGGCCACACCAACATCCGGTCGTCCCCCACGCACATCGGATACCGAGGAAAGTCCGATGGCGATGGAATCTCGATCTTCAGCTCGCGTAACATTTGGATCGATCATTGCTCACTCTCGTACTGTACCGATGGCTTAATCGACGCCATAATGGGATCCACCGGAATCACGATCTCCAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGACACGACGACGGCTACTCGCCGGATTCGGCTATGCAGGTGACTATTGCGTTTAATTTGTTCGGCGAGAAGCTCGTTCAGAGGATGCCCCGGTGCCGGCGAGGATACTTTCATGTCGTTAACAACGACTTCCGATCGTGGGAGATGTACGCCATCGGCGGAAGCGGCAGTCCGACGATCAACAGCCAAGGGAATCGGTATATTGCTCCGGGGAATCCCAACGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGACTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAATGGAGCATTTTTTGTGCCGTCCGGGGAAGGAGTGAGCAACATGTACGTTAAAGCGTCGAGTGTGGCGCCCAAATCCGCCGCTCTTGTCGATCGCCTGACACTGAACGCCGGTGTCTTCGGCGGGGCCAGGGAGAATAGACAGAGCTACTCTTATCCTGGAGACGAAAGCTCCTCTAGTTCGACTTCGAGTGGCAGCGATGGCGGTGGTGACTATTTCGGTATGATATTCGGTGGTGGCGGGGGGGTGAATATTGCACCACCACCACCATGTCTTTCAGTTGTCAACATGCTCATTCTAACTCTGCTTACTGTTTTAGTTGTGTACACGAACTATGATTCTGCTTTTTTATCATTGTAG

Protein sequence

MSATGCKRTHLKGQGGGGGGEGIDRGRRTENHFSFNFSFFFFFFHPFYLVFGLSSSQPNLEADMFATTGILFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVLVVYTNYDSAFLSL

Homology

[Close]

BLAST of CmaCh15G005000 vs. Swiss-Prot
Match: PLY12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 604.7 bits (1558), Expect = 9.8e-172
Identity = 311/491 (63.34%), Postives = 364/491 (74.13%), Query Frame = 1


Query: 70  ILFFIWVLSSSLPPPAMATFTFNLT---VPHLLPDPETVAYQVQRAVNDSFSRRQMLSVN 129
           +LFF    S  L  P M     N T   +PH  PDPE VAYQVQ  VN S +RRQ L   
Sbjct: 9   VLFF----SLFLLVPQMVFSMLNRTLLLIPH--PDPELVAYQVQWKVNASITRRQALDTT 68

Query: 130 SKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSD 189
            +  S+ C TGNPIDDCW+CD NW  NRQ LADCGIGFG+ A+GGKGGQ Y VTDSSD D
Sbjct: 69  DQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDD 128

Query: 190 PVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTL 249
            VNP+PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGC+TL
Sbjct: 129 AVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITL 188

Query: 250 QYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYC 309
           QY+SN+IIHNI+IHHC  +G+TN+RSSPTH G+R KSDGDGISIF S++IWIDHCSLS C
Sbjct: 189 QYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRC 248

Query: 310 TDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMP 369
            DGLIDA+MGSTGITISNN+FSHH+EVMLLGH D Y PDS MQVTIAFN FGEKL+QRMP
Sbjct: 249 KDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMP 308

Query: 370 RCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWS 429
           RCRRGY HVVNNDF  WEMYAIGGSG+PTINSQGNRY AP NP AKEVTKRV+T  GDW 
Sbjct: 309 RCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWK 368

Query: 430 EWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVF--GGAREN 489
            WNWR+EGDI+VNGAFFV SGEG    Y KA SV PKSA+ + ++T ++GV   GG   N
Sbjct: 369 GWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNN 428

Query: 490 RQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVL 549
              ++  G E      +SG D   DY   + G G    ++      SV+ + +L+ ++ L
Sbjct: 429 LGMWTTTGSEG-----TSGLDSYNDYTDEMSGAGSTNRLS-----FSVL-VFLLSSISYL 482

Query: 550 VVYTNYDSAFL 556
           VV+T+    F+
Sbjct: 489 VVFTSSTQMFM 482

[Close]

BLAST of CmaCh15G005000 vs. Swiss-Prot
Match: PLY13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.3e-163
Identity = 295/489 (60.33%), Postives = 366/489 (74.85%), Query Frame = 1


Query: 87  ATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQM------LSVNSKDQSSSCQTGNPI 146
           AT   NLT+PH  P P++VA  V R+VN+S +RRQ+       S +S   SSSC+TGNPI
Sbjct: 22  ATKPLNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPI 81

Query: 147 DDCWRC-DSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAV 206
           DDCWRC D++W  NRQRLADC IGFG   +GGK G+IYVVTDSSD++P NP PGTLRY V
Sbjct: 82  DDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGV 141

Query: 207 VQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINI 266
           +Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG GC+TLQY+ ++IIHN++I
Sbjct: 142 IQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHI 201

Query: 267 HHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTG 326
           + C                 RG+SDGDGISIF S+ IW+DHCS+S+CTDGLIDA+MGST 
Sbjct: 202 YDC---------KPSAGFEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTA 261

Query: 327 ITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNND 386
           ITISNNYF+HHDEVMLLGHDD Y+PD+ MQVTIAFN FG+ LVQRMPRCRRGY HVVNND
Sbjct: 262 ITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNND 321

Query: 387 FRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDT-NAGDWSEWNWRTEGDIMV 446
           F  W+MYAIGGSG+PTINSQGNRY AP +P+AKEVTKRVD+ + G+WS WNWRTEGD+M 
Sbjct: 322 FTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLME 381

Query: 447 NGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENR----QSYSYPGDE 506
           NGAFFV SGEG+S+MY KASSV PK+A+LVD+LT NAGVFGG R+++     SYS  G +
Sbjct: 382 NGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQGQSGNSYSPYGGD 441

Query: 507 SSSSSTSSGSDGGG-------------------DYFGMIFGGGGGVNIAPPPPCLSVV-N 544
                +S GS GGG                   + F MIFG       AP  P L+++ +
Sbjct: 442 GGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMIFGSD-----APSRPRLTLLFS 496

[Close]

BLAST of CmaCh15G005000 vs. Swiss-Prot
Match: PLY14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2)

HSP 1 Score: 518.5 bits (1334), Expect = 9.3e-146
Identity = 241/380 (63.42%), Postives = 293/380 (77.11%), Query Frame = 1


Query: 97  HLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQR 156
           H + DPE +A  V  ++ +S  RR++         SSC TGNPIDDCWRCD  W   R+R
Sbjct: 55  HAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCDKKWHRRRKR 114

Query: 157 LADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIK 216
           LADC IGFGR+A+GG+ G+ Y+VTD SD DPV P+PGTLRYAV+QDEPLWIVF  DM I 
Sbjct: 115 LADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVIT 174

Query: 217 LKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTH 276
           L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+  +RSS +H
Sbjct: 175 LSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESH 234

Query: 277 IGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLL 336
            G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY +HH+E +LL
Sbjct: 235 YGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILL 294

Query: 337 GHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTI 396
           GH D Y+ D  MQVTIA+N FGE L+QRMPRCR GYFHVVNND+  WEMYAIGGS +PTI
Sbjct: 295 GHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTI 354

Query: 397 NSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVK 456
           NSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG G S  Y +
Sbjct: 355 NSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYAR 414

Query: 457 ASSVAPKSAALVDRLTLNAG 477
           ASS+A KS++LV  LT ++G
Sbjct: 415 ASSLAAKSSSLVGMLTSSSG 428

[Close]

BLAST of CmaCh15G005000 vs. Swiss-Prot
Match: PLY15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 3.5e-145
Identity = 239/379 (63.06%), Postives = 297/379 (78.36%), Query Frame = 1


Query: 101 DPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADC 160
           DP+ VA +V + V  S   R   +   K    SC TGNPIDDCWRCD NW  NR+RLADC
Sbjct: 88  DPDMVADEVAKLVQMSEQNR---TARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 147

Query: 161 GIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYE 220
           GIGFGR+A+GG+ G+ Y+VTD +D D VNP+PGTLR+AV+Q+EPLWIVF  DM I+LK E
Sbjct: 148 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 207

Query: 221 LMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYR 280
           L+MNS+KT+D RG+NVHI  G C+T+Q+I+NVIIH ++IH C  TG+  +RSSP+H G+R
Sbjct: 208 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 267

Query: 281 GKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDD 340
             +DGD +SIF S +IWIDH SLS+C DGL+DA+MGST IT+SNN+F+HH+EVMLLGH D
Sbjct: 268 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 327

Query: 341 GYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQG 400
            Y+ D  MQVTIA+N FGE LVQRMPRCR GYFHVVNND+  WEMYAIGGS  PTINSQG
Sbjct: 328 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 387

Query: 401 NRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSV 460
           NRY AP +  AKEVTKRV+T+A +W +WNWR+EGD+++NGAFF PSG G S  Y +ASS+
Sbjct: 388 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 447

Query: 461 APKSAALVDRLTLNAGVFG 480
           A K +++VD +T  AG  G
Sbjct: 448 AAKPSSMVDTITSTAGALG 463

[Close]

BLAST of CmaCh15G005000 vs. Swiss-Prot
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 3.0e-144
Identity = 245/420 (58.33%), Postives = 312/420 (74.29%), Query Frame = 1


Query: 65  FATTGILFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLS 124
           + +  ++FF  +L S+L            ++P  + DPE V  +V R +N+S SRR++  
Sbjct: 28  YLSFALIFFCCILFSALAS----------SLP--VSDPELVVEEVHRKINESISRRKL-- 87

Query: 125 VNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSD 184
                   SC +GNPIDDCWRCD +W+ NR+RLADCGIGFG++A+GG+ G+IYVVTD  +
Sbjct: 88  -----GFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGN 147

Query: 185 SDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCV 244
            DPVNPRPGTLRYAV+QDEPLWI+F  DMTI+LK EL+MNS+KTLDGRGA+VHI+GG C+
Sbjct: 148 DDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCI 207

Query: 245 TLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLS 304
           T+QY++N+IIH ++IH C   G+T +R SP H GYR  SDGDG+SIF   ++W+DHCSLS
Sbjct: 208 TIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLS 267

Query: 305 YCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQR 364
            C DGLIDAI GST ITISNNY +HH++VMLLGH D Y  D  MQVTIAFN FGE LVQR
Sbjct: 268 NCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQR 327

Query: 365 MPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGD 424
           MPRCR GYFHVVNND+  WEMYAIGGS +PTINSQGNR++AP + ++KEVTK  D    +
Sbjct: 328 MPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDE 387

Query: 425 WSEWNWRTEGDIMVNGAFFVPSGEG--VSNMYVKASSVAPKSAALVDRLTLNAGVFGGAR 483
           W  WNWR+EGD+++NGAFF  SG G   S+ Y KASS+A + ++ V  +T+ +G     R
Sbjct: 388 WRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKR 428

[Close]

BLAST of CmaCh15G005000 vs. TrEMBL
Match: A0A0A0LK67_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_2G326460 PE=3 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 2.0e-256
Identity = 442/495 (89.29%), Postives = 464/495 (93.74%), Query Frame = 1


Query: 64  MFATTGILFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQML 123
           MFATTG+LFFIW LS +L P  MATF FNLTVP+LLPDPETVAYQVQR+VNDSF RRQML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVPNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 124 SVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 183
           S++SK QS+SCQT NPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS
Sbjct: 61  SIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 184 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 243
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 244 VTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 303
           +TLQYISNVIIHNINIHHC+ TGHTNIRSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 304 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQ 363
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDG++PDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 364 RMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 423
           RMPRCRRGY HVVNNDF+SWEMYAIGGSG+PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 424 DWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARE 483
           DWSEWNWRTEGDIMVNGAFFVPSGEG+SNMYVKASS+ PKSAALVD+LTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 484 NRQSYSYPGDE-SSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLT 543
           NRQS SYPGDE SSSSS SSGSDGGGDYFGMIF GGGG+N A PPP LS VNM+ILTL T
Sbjct: 421 NRQSTSYPGDEASSSSSGSSGSDGGGDYFGMIF-GGGGINNA-PPPSLSAVNMIILTLFT 480

Query: 544 VLVVYTNYDSAFLSL 558
           V      YD+  L+L
Sbjct: 481 V------YDALLLTL 487

[Close]

BLAST of CmaCh15G005000 vs. TrEMBL
Match: E7BTN2_VITVI (Pectate lyase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 1.5e-195
Identity = 337/487 (69.20%), Postives = 389/487 (79.88%), Query Frame = 1


Query: 77  LSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQT 136
           L  SL P   AT   NLT+PH  P+PE V  +VQR +N S SRRQ+LSV   D  SSC T
Sbjct: 12  LLCSLSPLIRATLNLNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQEND-GSSCLT 71

Query: 137 GNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLR 196
           GNP+DDCWRCD NWQ NRQRLADCGIGFG+DAMGGKGGQ YVVTDSSD DP+NP PGTLR
Sbjct: 72  GNPVDDCWRCDPNWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPINPAPGTLR 131

Query: 197 YAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHN 256
           +AV+Q +PLWI F+ +M IKLKYEL++NS+KT+DGRGANVHITG GC+TLQY+SNVIIH 
Sbjct: 132 HAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHG 191

Query: 257 INIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMG 316
           +++HHC+ +G+ +IRSSPTH+G+RGKSDGDGISIF SR IWIDHCSLSYC DGLIDAIMG
Sbjct: 192 VHVHHCVPSGNADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMG 251

Query: 317 STGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVV 376
           STGITISNNYFSHHDEVMLLGHDD YSPDS MQVTIAFN FGE LVQRMPRCRRGY HVV
Sbjct: 252 STGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVV 311

Query: 377 NNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDI 436
           NNDF  WEMYAIGGS +PTINSQGNRY APG+ NAKEVTKRV+T+  DW+EWNWRTEGD+
Sbjct: 312 NNDFTRWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDV 371

Query: 437 MVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDESS 496
           MVNGAFFVPSG G+S  Y KASSV PKSAAL+ +LT+NAG   G+R++    SYPG  S 
Sbjct: 372 MVNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDDSMGLSYPGFSSG 431

Query: 497 SSSTSSGSDGG------GDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVLVVYTNY 556
            +S+S  ++GG       DYFGMIFG G G   APPPP +++     L ++ +L V  N+
Sbjct: 432 GTSSSISNNGGHGSSDDPDYFGMIFGSGSGSG-APPPPSVTISMFFSLLIILILYVTINH 491

Query: 557 DSAFLSL 558
               L L
Sbjct: 492 GGVLLFL 496

[Close]

BLAST of CmaCh15G005000 vs. TrEMBL
Match: D7TM46_VITVI (Pectate lyase OS=Vitis vinifera GN=VIT_13s0019g04910 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 2.6e-195
Identity = 337/487 (69.20%), Postives = 388/487 (79.67%), Query Frame = 1


Query: 77  LSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQT 136
           L  SL P   AT   NLT+PH  P+PE V  +VQR +N S SRRQ+LSV   D  SSC T
Sbjct: 12  LLCSLSPLIRATLNLNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQEND-GSSCLT 71

Query: 137 GNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLR 196
           GNP+DDCWRCD NWQ NRQRLADCGIGFG DAMGGKGGQ YVVTDSSD DP+NP PGTLR
Sbjct: 72  GNPVDDCWRCDPNWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPINPAPGTLR 131

Query: 197 YAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHN 256
           +AV+Q +PLWI F+ +M IKLKYEL++NS+KT+DGRGANVHITG GC+TLQY+SNVIIH 
Sbjct: 132 HAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHG 191

Query: 257 INIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMG 316
           +++HHC+ +G+ +IRSSPTH+G+RGKSDGDGISIF SR IWIDHCSLSYC DGLIDAIMG
Sbjct: 192 VHVHHCVPSGNADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMG 251

Query: 317 STGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVV 376
           STGITISNNYFSHHDEVMLLGHDD YSPDS MQVTIAFN FGE LVQRMPRCRRGY HVV
Sbjct: 252 STGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVV 311

Query: 377 NNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDI 436
           NNDF  WEMYAIGGS +PTINSQGNRY APG+ NAKEVTKRV+T+  DW+EWNWRTEGD+
Sbjct: 312 NNDFTQWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDV 371

Query: 437 MVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDESS 496
           MVNGAFFVPSG G+S  Y KASSV PKSAAL+ +LT+NAG   G+R++    SYPG  S 
Sbjct: 372 MVNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDDSMGVSYPGFSSG 431

Query: 497 SSSTSSGSDGG------GDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVLVVYTNY 556
            +S+S  ++GG       DYFGMIFG G G   APPPP +++     L ++ +L V  N+
Sbjct: 432 GTSSSISNNGGHGSSDDPDYFGMIFGSGSGSG-APPPPSVTIPMFFSLLIILILYVTINH 491

Query: 557 DSAFLSL 558
               L L
Sbjct: 492 GGVLLFL 496

[Close]

BLAST of CmaCh15G005000 vs. TrEMBL
Match: M5X7B4_PRUPE (Pectate lyase OS=Prunus persica GN=PL3 PE=2 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 9.8e-195
Identity = 355/523 (67.88%), Postives = 406/523 (77.63%), Query Frame = 1


Query: 44  FHPFYLVFGLSSSQPNLEADMFATTGILFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPE 103
           F P  L+F LSS    L + M  TT IL     L SSL P   A+ + NLT+PH  P+PE
Sbjct: 49  FGPPSLLFFLSS----LLSRMLPTTCILLIC--LLSSLSPLTKAS-SLNLTLPHQHPNPE 108

Query: 104 TVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIG 163
            VA +VQR VN S SRRQMLS+  K+Q   C  GNPIDDCWRCDSNW  NRQ+LADCGIG
Sbjct: 109 AVAQEVQRRVNASLSRRQMLSLELKEQQQ-CLIGNPIDDCWRCDSNWARNRQKLADCGIG 168

Query: 164 FGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMM 223
           FG+DAMGGKGGQIY+VTDSSD DP NP PGTLR+AV+Q EPLWI+F+ADMTIKLK EL++
Sbjct: 169 FGQDAMGGKGGQIYIVTDSSDRDPANPVPGTLRHAVIQTEPLWIIFSADMTIKLKCELIV 228

Query: 224 NSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKS 283
           NS+KT+DGRG NVH+TGGGC+TLQY+SN+IIHNI++HHC   G+TN+ SSPTH+G+RGKS
Sbjct: 229 NSFKTIDGRGFNVHVTGGGCITLQYVSNIIIHNIHVHHCKPAGNTNVASSPTHVGWRGKS 288

Query: 284 DGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYS 343
           DGDGIS+F +R IWIDHCSLSYC DGLIDAIMGSTGITISN+YF+HHDEVMLLGHDD Y 
Sbjct: 289 DGDGISLFGARKIWIDHCSLSYCADGLIDAIMGSTGITISNSYFAHHDEVMLLGHDDKYL 348

Query: 344 PDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRY 403
           PDS MQVTIAFN FGE LVQRMPRCRRGY HVVNNDF  WEMYAIGGS +PTINSQGNRY
Sbjct: 349 PDSGMQVTIAFNHFGEALVQRMPRCRRGYIHVVNNDFTQWEMYAIGGSANPTINSQGNRY 408

Query: 404 IAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPK 463
            AP + NAKEVTKRVDTN GDWS+WNWRT+GDIMVNGAFFVPSG G+S  Y +ASS  PK
Sbjct: 409 TAPQDQNAKEVTKRVDTNEGDWSDWNWRTDGDIMVNGAFFVPSGAGMSTQYARASSTEPK 468

Query: 464 SAALVDRLTLNAGVFGGARENRQSYSYPGDESSSSST------SSGSDGG-GDYFGMIFG 523
           S AL+DRLT NAGVFG  R +  S S+PGD+   + T      S GS GG GDYFGMIFG
Sbjct: 469 SVALIDRLTNNAGVFGDPRSS-TSVSHPGDDGGGTITDGTNTGSEGSSGGDGDYFGMIFG 528

Query: 524 GGGGVNIAPPPPCLSVVNMLILTLLTVLVVYT--NYDSAFLSL 558
            G       PP   S  N + L+LL + ++Y   N+  A LSL
Sbjct: 529 NGA------PPSSSSSSNTIFLSLLIIFILYVTINHGGALLSL 556

[Close]

BLAST of CmaCh15G005000 vs. TrEMBL
Match: A0A061FND9_THECC (Pectate lyase OS=Theobroma cacao GN=TCM_043329 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.6e-192
Identity = 330/468 (70.51%), Postives = 388/468 (82.91%), Query Frame = 1


Query: 85  AMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCW 144
           ++A   FNL++PH  PDPE+V   VQR +N S SRRQ LSV  KDQ   C+TGNPIDDCW
Sbjct: 18  SIARAAFNLSLPHQHPDPESVVQDVQRRLNVSLSRRQALSVTQKDQ---CRTGNPIDDCW 77

Query: 145 RCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEP 204
           RCD NW  NRQ LADC IGF +  +GGKGG+IY VTDSSDS+P NP+PGTLR+AV+Q+EP
Sbjct: 78  RCDPNWYNNRQHLADCSIGFAQGTLGGKGGRIYTVTDSSDSNPANPKPGTLRHAVIQNEP 137

Query: 205 LWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCIS 264
           LWI+F+ +M IKLK+EL+ NSYKT+DGRGANVH+TG GC+TLQY+S+VIIHNI++HHC  
Sbjct: 138 LWIIFSTNMVIKLKHELIFNSYKTVDGRGANVHVTGNGCITLQYVSHVIIHNIHVHHCKP 197

Query: 265 TGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISN 324
           +G+T+I SSPTH+G+RG+SDGDGISIFSS+ +WIDHCSLSYCTDGLIDAIMGSTGITISN
Sbjct: 198 SGNTDIASSPTHVGWRGRSDGDGISIFSSQKLWIDHCSLSYCTDGLIDAIMGSTGITISN 257

Query: 325 NYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWE 384
           NYFSHHDEVMLLGHDD Y PDS MQVTIAFN FG+ LVQRMPRCRRGY HVVNNDF +WE
Sbjct: 258 NYFSHHDEVMLLGHDDRYLPDSGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTAWE 317

Query: 385 MYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFV 444
           MYAIGGS +PTINSQGNRY APG+PNAKEVTKRVDTN  DW++WNWRTEGD++VNGA+FV
Sbjct: 318 MYAIGGSANPTINSQGNRYTAPGDPNAKEVTKRVDTNEKDWTDWNWRTEGDLLVNGAYFV 377

Query: 445 PSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDES-SSSSTSSG 504
           PSG G+S  Y KASSV PKSAAL+++LT NAGVFG ARE   S+SYPG  S  SSSTS+G
Sbjct: 378 PSGAGLSAQYAKASSVEPKSAALIEQLTFNAGVFGEAREETGSFSYPGYSSGGSSSTSTG 437

Query: 505 ---SDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVLVVYT 549
              S   GDYFGMIFG G     +P PP  + +  + L+LL +LV+Y+
Sbjct: 438 SARSGDDGDYFGMIFGSG-----SPLPPASTSIASIFLSLLIILVLYS 477

[Close]

BLAST of CmaCh15G005000 vs. TAIR10
Match: AT3G53190.1 (AT3G53190.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 604.7 bits (1558), Expect = 5.5e-173
Identity = 311/491 (63.34%), Postives = 364/491 (74.13%), Query Frame = 1


Query: 70  ILFFIWVLSSSLPPPAMATFTFNLT---VPHLLPDPETVAYQVQRAVNDSFSRRQMLSVN 129
           +LFF    S  L  P M     N T   +PH  PDPE VAYQVQ  VN S +RRQ L   
Sbjct: 9   VLFF----SLFLLVPQMVFSMLNRTLLLIPH--PDPELVAYQVQWKVNASITRRQALDTT 68

Query: 130 SKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSD 189
            +  S+ C TGNPIDDCW+CD NW  NRQ LADCGIGFG+ A+GGKGGQ Y VTDSSD D
Sbjct: 69  DQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDD 128

Query: 190 PVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTL 249
            VNP+PGTLRY V+Q+EPLWIVF ++M IKLK EL+ NSYKTLDGRGANVHI GGGC+TL
Sbjct: 129 AVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITL 188

Query: 250 QYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYC 309
           QY+SN+IIHNI+IHHC  +G+TN+RSSPTH G+R KSDGDGISIF S++IWIDHCSLS C
Sbjct: 189 QYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRC 248

Query: 310 TDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMP 369
            DGLIDA+MGSTGITISNN+FSHH+EVMLLGH D Y PDS MQVTIAFN FGEKL+QRMP
Sbjct: 249 KDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMP 308

Query: 370 RCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWS 429
           RCRRGY HVVNNDF  WEMYAIGGSG+PTINSQGNRY AP NP AKEVTKRV+T  GDW 
Sbjct: 309 RCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWK 368

Query: 430 EWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVF--GGAREN 489
            WNWR+EGDI+VNGAFFV SGEG    Y KA SV PKSA+ + ++T ++GV   GG   N
Sbjct: 369 GWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLGVGGRNNN 428

Query: 490 RQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVL 549
              ++  G E      +SG D   DY   + G G    ++      SV+ + +L+ ++ L
Sbjct: 429 LGMWTTTGSEG-----TSGLDSYNDYTDEMSGAGSTNRLS-----FSVL-VFLLSSISYL 482

Query: 550 VVYTNYDSAFL 556
           VV+T+    F+
Sbjct: 489 VVFTSSTQMFM 482

[Close]

BLAST of CmaCh15G005000 vs. TAIR10
Match: AT5G04310.1 (AT5G04310.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 601.7 bits (1550), Expect = 4.7e-172
Identity = 300/490 (61.22%), Postives = 365/490 (74.49%), Query Frame = 1


Query: 70  ILFFIWVLSSSLPPPAMATFT--FNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNS 129
           I++F  ++S S    A +T    FNL++PH  P PE V   VQR +NDS SRRQ+L+   
Sbjct: 19  IIWFCLLVSLSHHGRASSTSASIFNLSLPHQHPFPEHVVLNVQRKLNDSLSRRQLLTYQQ 78

Query: 130 KDQSS------SCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTD 189
            D ++      SC TGNPIDDCWRCD NW ANRQRLADC IGFG+  +GGKGGQ Y+VTD
Sbjct: 79  DDGTTASSPIPSCITGNPIDDCWRCDPNWSANRQRLADCSIGFGQGTLGGKGGQFYLVTD 138

Query: 190 SSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGG 249
           SSD+D  NP PGTLR+AV+Q EPLWI+F++DM IKLK+EL++ SYKT+DGRG N+ ITG 
Sbjct: 139 SSDNDAANPIPGTLRHAVIQPEPLWIIFSSDMGIKLKHELIIGSYKTIDGRGTNIQITGH 198

Query: 250 GCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHC 309
           GC+T+Q +S+VIIHN++IHHC  +G+T + SSPTH+G+RG SDGDGIS+ +S +IW+DHC
Sbjct: 199 GCLTIQQVSHVIIHNVHIHHCKPSGNTLVASSPTHVGFRGVSDGDGISVSASHHIWVDHC 258

Query: 310 SLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKL 369
           SL YC DGLID I+ ST +TISNNYFSHHDEVMLLGHDD Y+ D  MQVTIAFN FGE L
Sbjct: 259 SLGYCADGLIDVILASTAVTISNNYFSHHDEVMLLGHDDRYTADKGMQVTIAFNHFGEGL 318

Query: 370 VQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTN 429
           VQRMPRCR GY HVVNNDF +WEMYAIGGS SPTINSQGNRY AP +PNAKEVTKRVD+N
Sbjct: 319 VQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYTAPIDPNAKEVTKRVDSN 378

Query: 430 AGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGG- 489
              WS WNWRTEGD+MVNGAFFVPSG+GVS  Y +A+SV PK+AA++D+LT+NAGVFG  
Sbjct: 379 EKHWSGWNWRTEGDVMVNGAFFVPSGDGVSPAYARATSVQPKAAAIIDQLTVNAGVFGDP 438

Query: 490 ARENRQSYSYPG------------DESSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPP 539
           +  N Q  S+PG             +S  +   SGSD     F +IFG   G     P  
Sbjct: 439 SGRNGQGGSFPGITNGGGTITRGYSKSGPAGGGSGSDSDDGLFTLIFGNNSGAVALRPGQ 498

[Close]

BLAST of CmaCh15G005000 vs. TAIR10
Match: AT3G54920.1 (AT3G54920.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 577.8 bits (1488), Expect = 7.3e-165
Identity = 295/489 (60.33%), Postives = 366/489 (74.85%), Query Frame = 1


Query: 87  ATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQM------LSVNSKDQSSSCQTGNPI 146
           AT   NLT+PH  P P++VA  V R+VN+S +RRQ+       S +S   SSSC+TGNPI
Sbjct: 22  ATKPLNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPI 81

Query: 147 DDCWRC-DSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAV 206
           DDCWRC D++W  NRQRLADC IGFG   +GGK G+IYVVTDSSD++P NP PGTLRY V
Sbjct: 82  DDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGV 141

Query: 207 VQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINI 266
           +Q+EPLWIVF+++M I+LK EL++NSYKTLDGRG+ VHITG GC+TLQY+ ++IIHN++I
Sbjct: 142 IQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHI 201

Query: 267 HHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTG 326
           + C                 RG+SDGDGISIF S+ IW+DHCS+S+CTDGLIDA+MGST 
Sbjct: 202 YDC---------KPSAGFEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTA 261

Query: 327 ITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNND 386
           ITISNNYF+HHDEVMLLGHDD Y+PD+ MQVTIAFN FG+ LVQRMPRCRRGY HVVNND
Sbjct: 262 ITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNND 321

Query: 387 FRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDT-NAGDWSEWNWRTEGDIMV 446
           F  W+MYAIGGSG+PTINSQGNRY AP +P+AKEVTKRVD+ + G+WS WNWRTEGD+M 
Sbjct: 322 FTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLME 381

Query: 447 NGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENR----QSYSYPGDE 506
           NGAFFV SGEG+S+MY KASSV PK+A+LVD+LT NAGVFGG R+++     SYS  G +
Sbjct: 382 NGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQGQSGNSYSPYGGD 441

Query: 507 SSSSSTSSGSDGGG-------------------DYFGMIFGGGGGVNIAPPPPCLSVV-N 544
                +S GS GGG                   + F MIFG       AP  P L+++ +
Sbjct: 442 GGGGGSSGGSSGGGMDVMGGTTRGSSSSSGDDSNVFQMIFGSD-----APSRPRLTLLFS 496

[Close]

BLAST of CmaCh15G005000 vs. TAIR10
Match: AT4G13210.2 (AT4G13210.2 Pectin lyase-like superfamily protein)

HSP 1 Score: 518.5 bits (1334), Expect = 5.2e-147
Identity = 241/380 (63.42%), Postives = 293/380 (77.11%), Query Frame = 1


Query: 97  HLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQR 156
           H + DPE +A  V  ++ +S  RR++         SSC TGNPIDDCWRCD  W   R+R
Sbjct: 55  HAVKDPEEIAAMVDMSIRNSTYRRKL------GFFSSCSTGNPIDDCWRCDKKWHRRRKR 114

Query: 157 LADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIK 216
           LADC IGFGR+A+GG+ G+ Y+VTD SD DPV P+PGTLRYAV+QDEPLWIVF  DM I 
Sbjct: 115 LADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVIT 174

Query: 217 LKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTH 276
           L  EL+MNS+KT+DGRG NVHI GG C+T+QY++N+IIH INIH C  TG+  +RSS +H
Sbjct: 175 LSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESH 234

Query: 277 IGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLL 336
            G+R  +DGDGISIF S +IWIDH SLS C DGLIDAIMGST ITISNNY +HH+E +LL
Sbjct: 235 YGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILL 294

Query: 337 GHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTI 396
           GH D Y+ D  MQVTIA+N FGE L+QRMPRCR GYFHVVNND+  WEMYAIGGS +PTI
Sbjct: 295 GHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTI 354

Query: 397 NSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVK 456
           NSQGNR++APGN  AKEVTKRV    G+W+ WNWR++GD+M+NGA+F  SG G S  Y +
Sbjct: 355 NSQGNRFLAPGNRFAKEVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYAR 414

Query: 457 ASSVAPKSAALVDRLTLNAG 477
           ASS+A KS++LV  LT ++G
Sbjct: 415 ASSLAAKSSSLVGMLTSSSG 428

[Close]

BLAST of CmaCh15G005000 vs. TAIR10
Match: AT4G13710.1 (AT4G13710.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 516.5 bits (1329), Expect = 2.0e-146
Identity = 239/379 (63.06%), Postives = 297/379 (78.36%), Query Frame = 1


Query: 101 DPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADC 160
           DP+ VA +V + V  S   R   +   K    SC TGNPIDDCWRCD NW  NR+RLADC
Sbjct: 88  DPDMVADEVAKLVQMSEQNR---TARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADC 147

Query: 161 GIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYE 220
           GIGFGR+A+GG+ G+ Y+VTD +D D VNP+PGTLR+AV+Q+EPLWIVF  DM I+LK E
Sbjct: 148 GIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQE 207

Query: 221 LMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYR 280
           L+MNS+KT+D RG+NVHI  G C+T+Q+I+NVIIH ++IH C  TG+  +RSSP+H G+R
Sbjct: 208 LIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWR 267

Query: 281 GKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDD 340
             +DGD +SIF S +IWIDH SLS+C DGL+DA+MGST IT+SNN+F+HH+EVMLLGH D
Sbjct: 268 TMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSD 327

Query: 341 GYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQG 400
            Y+ D  MQVTIA+N FGE LVQRMPRCR GYFHVVNND+  WEMYAIGGS  PTINSQG
Sbjct: 328 SYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQG 387

Query: 401 NRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSV 460
           NRY AP +  AKEVTKRV+T+A +W +WNWR+EGD+++NGAFF PSG G S  Y +ASS+
Sbjct: 388 NRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSL 447

Query: 461 APKSAALVDRLTLNAGVFG 480
           A K +++VD +T  AG  G
Sbjct: 448 AAKPSSMVDTITSTAGALG 463

[Close]

BLAST of CmaCh15G005000 vs. NCBI nr
Match: gi|659113368|ref|XP_008456538.1| (PREDICTED: probable pectate lyase 12 [Cucumis melo])

HSP 1 Score: 906.7 bits (2342), Expect = 1.9e-260
Identity = 447/495 (90.30%), Postives = 469/495 (94.75%), Query Frame = 1


Query: 64  MFATTGILFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQML 123
           MFATTG+LFFIW LS +L P  MATF FNLTV +LLPDPETVAYQVQR+VNDSF RRQML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVQNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 124 SVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 183
           SV+SK QSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS
Sbjct: 61  SVHSKGQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 184 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 243
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 244 VTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 303
           +TLQYISNVIIHNINIHHC+ TGHTNIRSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 304 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQ 363
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDG++PDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 364 RMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 423
           RMPRCRRGY HVVNNDFRSWEMYAIGGSG+PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFRSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 424 DWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARE 483
           DWSEWNWRTEGDIMVNGAFFVPSGEG+SNMYVKASS+ PKSAALVD+LTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 484 NRQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTV 543
            RQS SYPGDE+SSSS SSGSDGGGDYFGMIF GGGG+N A PPP LS VNM+ILTL TV
Sbjct: 421 TRQSSSYPGDETSSSSGSSGSDGGGDYFGMIF-GGGGINNA-PPPSLSAVNMVILTLFTV 480

Query: 544 LVVYT-NYDSAFLSL 558
           L++YT NYD+  L+L
Sbjct: 481 LILYTNNYDALLLTL 493

[Close]

BLAST of CmaCh15G005000 vs. NCBI nr
Match: gi|449465310|ref|XP_004150371.1| (PREDICTED: probable pectate lyase 12 [Cucumis sativus])

HSP 1 Score: 892.9 bits (2306), Expect = 2.9e-256
Identity = 442/495 (89.29%), Postives = 464/495 (93.74%), Query Frame = 1


Query: 64  MFATTGILFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQML 123
           MFATTG+LFFIW LS +L P  MATF FNLTVP+LLPDPETVAYQVQR+VNDSF RRQML
Sbjct: 1   MFATTGVLFFIWFLSCTLLPLTMATFNFNLTVPNLLPDPETVAYQVQRSVNDSFFRRQML 60

Query: 124 SVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 183
           S++SK QS+SCQT NPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS
Sbjct: 61  SIHSKGQSNSCQTANPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSS 120

Query: 184 DSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 243
           D DPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC
Sbjct: 121 DPDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGC 180

Query: 244 VTLQYISNVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSL 303
           +TLQYISNVIIHNINIHHC+ TGHTNIRSSPTH+GYRGKSDGDGISIFSSRNIWIDHCSL
Sbjct: 181 ITLQYISNVIIHNINIHHCVPTGHTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSL 240

Query: 304 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQ 363
           SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDG++PDS MQVTIAFNLFGEKLVQ
Sbjct: 241 SYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGFTPDSGMQVTIAFNLFGEKLVQ 300

Query: 364 RMPRCRRGYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 423
           RMPRCRRGY HVVNNDF+SWEMYAIGGSG+PTINSQGNRYIAPGNPNAKEVTKRVDTNAG
Sbjct: 301 RMPRCRRGYIHVVNNDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAG 360

Query: 424 DWSEWNWRTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARE 483
           DWSEWNWRTEGDIMVNGAFFVPSGEG+SNMYVKASS+ PKSAALVD+LTLNAGVFGG+RE
Sbjct: 361 DWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSRE 420

Query: 484 NRQSYSYPGDE-SSSSSTSSGSDGGGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLT 543
           NRQS SYPGDE SSSSS SSGSDGGGDYFGMIF GGGG+N A PPP LS VNM+ILTL T
Sbjct: 421 NRQSTSYPGDEASSSSSGSSGSDGGGDYFGMIF-GGGGINNA-PPPSLSAVNMIILTLFT 480

Query: 544 VLVVYTNYDSAFLSL 558
           V      YD+  L+L
Sbjct: 481 V------YDALLLTL 487

[Close]

BLAST of CmaCh15G005000 vs. NCBI nr
Match: gi|526117419|ref|NP_001268017.1| (probable pectate lyase 12-like precursor [Vitis vinifera])

HSP 1 Score: 690.6 bits (1781), Expect = 2.2e-195
Identity = 337/487 (69.20%), Postives = 389/487 (79.88%), Query Frame = 1


Query: 77  LSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQT 136
           L  SL P   AT   NLT+PH  P+PE V  +VQR +N S SRRQ+LSV   D  SSC T
Sbjct: 12  LLCSLSPLIRATLNLNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQEND-GSSCLT 71

Query: 137 GNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLR 196
           GNP+DDCWRCD NWQ NRQRLADCGIGFG+DAMGGKGGQ YVVTDSSD DP+NP PGTLR
Sbjct: 72  GNPVDDCWRCDPNWQNNRQRLADCGIGFGQDAMGGKGGQFYVVTDSSDEDPINPAPGTLR 131

Query: 197 YAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHN 256
           +AV+Q +PLWI F+ +M IKLKYEL++NS+KT+DGRGANVHITG GC+TLQY+SNVIIH 
Sbjct: 132 HAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHG 191

Query: 257 INIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMG 316
           +++HHC+ +G+ +IRSSPTH+G+RGKSDGDGISIF SR IWIDHCSLSYC DGLIDAIMG
Sbjct: 192 VHVHHCVPSGNADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMG 251

Query: 317 STGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVV 376
           STGITISNNYFSHHDEVMLLGHDD YSPDS MQVTIAFN FGE LVQRMPRCRRGY HVV
Sbjct: 252 STGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVV 311

Query: 377 NNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDI 436
           NNDF  WEMYAIGGS +PTINSQGNRY APG+ NAKEVTKRV+T+  DW+EWNWRTEGD+
Sbjct: 312 NNDFTRWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDV 371

Query: 437 MVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDESS 496
           MVNGAFFVPSG G+S  Y KASSV PKSAAL+ +LT+NAG   G+R++    SYPG  S 
Sbjct: 372 MVNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDDSMGLSYPGFSSG 431

Query: 497 SSSTSSGSDGG------GDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVLVVYTNY 556
            +S+S  ++GG       DYFGMIFG G G   APPPP +++     L ++ +L V  N+
Sbjct: 432 GTSSSISNNGGHGSSDDPDYFGMIFGSGSGSG-APPPPSVTISMFFSLLIILILYVTINH 491

Query: 557 DSAFLSL 558
               L L
Sbjct: 492 GGVLLFL 496

[Close]

BLAST of CmaCh15G005000 vs. NCBI nr
Match: gi|296085972|emb|CBI31413.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 689.9 bits (1779), Expect = 3.7e-195
Identity = 337/487 (69.20%), Postives = 388/487 (79.67%), Query Frame = 1


Query: 77  LSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQSSSCQT 136
           L  SL P   AT   NLT+PH  P+PE V  +VQR +N S SRRQ+LSV   D  SSC T
Sbjct: 12  LLCSLSPLIRATLNLNLTLPHQHPNPEVVVDEVQRRLNVSISRRQVLSVQEND-GSSCLT 71

Query: 137 GNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLR 196
           GNP+DDCWRCD NWQ NRQRLADCGIGFG DAMGGKGGQ YVVTDSSD DP+NP PGTLR
Sbjct: 72  GNPVDDCWRCDPNWQNNRQRLADCGIGFGLDAMGGKGGQFYVVTDSSDEDPINPAPGTLR 131

Query: 197 YAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHN 256
           +AV+Q +PLWI F+ +M IKLKYEL++NS+KT+DGRGANVHITG GC+TLQY+SNVIIH 
Sbjct: 132 HAVIQTQPLWITFSTNMLIKLKYELIVNSFKTIDGRGANVHITGRGCMTLQYVSNVIIHG 191

Query: 257 INIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMG 316
           +++HHC+ +G+ +IRSSPTH+G+RGKSDGDGISIF SR IWIDHCSLSYC DGLIDAIMG
Sbjct: 192 VHVHHCVPSGNADIRSSPTHVGWRGKSDGDGISIFGSRKIWIDHCSLSYCRDGLIDAIMG 251

Query: 317 STGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVV 376
           STGITISNNYFSHHDEVMLLGHDD YSPDS MQVTIAFN FGE LVQRMPRCRRGY HVV
Sbjct: 252 STGITISNNYFSHHDEVMLLGHDDKYSPDSGMQVTIAFNHFGEGLVQRMPRCRRGYIHVV 311

Query: 377 NNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDI 436
           NNDF  WEMYAIGGS +PTINSQGNRY APG+ NAKEVTKRV+T+  DW+EWNWRTEGD+
Sbjct: 312 NNDFTQWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDV 371

Query: 437 MVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDESS 496
           MVNGAFFVPSG G+S  Y KASSV PKSAAL+ +LT+NAG   G+R++    SYPG  S 
Sbjct: 372 MVNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDDSMGVSYPGFSSG 431

Query: 497 SSSTSSGSDGG------GDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLTVLVVYTNY 556
            +S+S  ++GG       DYFGMIFG G G   APPPP +++     L ++ +L V  N+
Sbjct: 432 GTSSSISNNGGHGSSDDPDYFGMIFGSGSGSG-APPPPSVTIPMFFSLLIILILYVTINH 491

Query: 557 DSAFLSL 558
               L L
Sbjct: 492 GGVLLFL 496

[Close]

BLAST of CmaCh15G005000 vs. NCBI nr
Match: gi|1012245432|ref|XP_015942075.1| (PREDICTED: probable pectate lyase 18 [Arachis duranensis])

HSP 1 Score: 688.0 bits (1774), Expect = 1.4e-194
Identity = 343/493 (69.57%), Postives = 394/493 (79.92%), Query Frame = 1


Query: 71  LFFIWVLSSSLPPPAMATFTFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMLSVNSKDQ 130
           +  +W+L SS  PP  ATF  NLT+PH  P PE V +QVQR +N S SRR++LS   KDQ
Sbjct: 8   ILLMWLLLSSFSPPIKATF--NLTLPHQHPYPEAVVHQVQRKINASLSRRELLS---KDQ 67

Query: 131 SSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNP 190
           SS+C TGNP+DDCWRCD NW ANRQ+LADCGIGFGRDAMGGKGGQIYVVTDSSD DP NP
Sbjct: 68  SSACLTGNPVDDCWRCDPNWSANRQKLADCGIGFGRDAMGGKGGQIYVVTDSSDRDPANP 127

Query: 191 RPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYIS 250
            PGTLR+AV+QD PLWIVF+ DMTI LK+EL+ NSYKT+DGRGANVH+TG GC+TLQYIS
Sbjct: 128 VPGTLRHAVIQDVPLWIVFSGDMTIVLKHELIFNSYKTVDGRGANVHVTGHGCITLQYIS 187

Query: 251 NVIIHNINIHHCISTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGL 310
           NVIIHNI++HHC  +G+TNIR+SPTH+G+RG SDGDGISIF SR IWIDHCSLSYCTDGL
Sbjct: 188 NVIIHNIHVHHCKPSGNTNIRASPTHVGWRGVSDGDGISIFGSRKIWIDHCSLSYCTDGL 247

Query: 311 IDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRR 370
           IDAIMGSTGITISNN+F+HHDEVMLLGH+D Y PD  MQVTIAFN FGE LVQRMPRCR 
Sbjct: 248 IDAIMGSTGITISNNHFAHHDEVMLLGHNDKYLPDKGMQVTIAFNHFGEGLVQRMPRCRL 307

Query: 371 GYFHVVNNDFRSWEMYAIGGSGSPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNW 430
           GY HVVNNDF  WEMYAIGGS +PTINSQGNRY AP +PNAKEVTKRVDTN G+WS+WNW
Sbjct: 308 GYIHVVNNDFTQWEMYAIGGSANPTINSQGNRYTAPADPNAKEVTKRVDTNEGEWSDWNW 367

Query: 431 RTEGDIMVNGAFFVPSGEGVSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSY-S 490
           RT+GDIMVNGAFFVPSG G+S  Y +ASSV PKSA  +D LT+ +GVFG  R+N   +  
Sbjct: 368 RTDGDIMVNGAFFVPSGGGMSAQYAEASSVQPKSAVQIDHLTMYSGVFGDPRDNGDLFPG 427

Query: 491 YPGDESSSSST-----SSGSDG--GGDYFGMIFGGGGGVNIAPPPPCLSVVNMLILTLLT 550
           Y G  + +S+T     S GS G  GGD+FGMIFGGG     APPP  + V     L+LL 
Sbjct: 428 YTGGGTVTSATNKGGSSGGSSGGDGGDFFGMIFGGGSS-QAAPPPSSILVFVSTFLSLLI 487

Query: 551 VLVVYTNYDSAFL 556
           + ++ T  + A L
Sbjct: 488 IFILDTTTNHAIL 494

The following BLAST results are available for this feature:

BLAST of CmaCh15G005000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY12_ARATH	9.8e-172	63.34	Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2	[more]
PLY13_ARATH	1.3e-163	60.33	Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1	[more]
PLY14_ARATH	9.3e-146	63.42	Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=2	[more]
PLY15_ARATH	3.5e-145	63.06	Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1	[more]
PLY22_ARATH	3.0e-144	58.33	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	[more]

BLAST of CmaCh15G005000 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK67_CUCSA	2.0e-256	89.29	Pectate lyase OS=Cucumis sativus GN=Csa_2G326460 PE=3 SV=1	[more]
E7BTN2_VITVI	1.5e-195	69.20	Pectate lyase OS=Vitis vinifera PE=2 SV=1	[more]
D7TM46_VITVI	2.6e-195	69.20	Pectate lyase OS=Vitis vinifera GN=VIT_13s0019g04910 PE=3 SV=1	[more]
M5X7B4_PRUPE	9.8e-195	67.88	Pectate lyase OS=Prunus persica GN=PL3 PE=2 SV=1	[more]
A0A061FND9_THECC	1.6e-192	70.51	Pectate lyase OS=Theobroma cacao GN=TCM_043329 PE=3 SV=1	[more]

BLAST of CmaCh15G005000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G53190.1	5.5e-173	63.34	Pectin lyase-like superfamily protein	[more]
AT5G04310.1	4.7e-172	61.22	Pectin lyase-like superfamily protein	[more]
AT3G54920.1	7.3e-165	60.33	Pectin lyase-like superfamily protein	[more]
AT4G13210.2	5.2e-147	63.42	Pectin lyase-like superfamily protein	[more]
AT4G13710.1	2.0e-146	63.06	Pectin lyase-like superfamily protein	[more]

BLAST of CmaCh15G005000 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113368\|ref\|XP_008456538.1\|	1.9e-260	90.30	PREDICTED: probable pectate lyase 12 [Cucumis melo]	[more]
gi\|449465310\|ref\|XP_004150371.1\|	2.9e-256	89.29	PREDICTED: probable pectate lyase 12 [Cucumis sativus]	[more]
gi\|526117419\|ref\|NP_001268017.1\|	2.2e-195	69.20	probable pectate lyase 12-like precursor [Vitis vinifera]	[more]
gi\|296085972\|emb\|CBI31413.3\|	3.7e-195	69.20	unnamed protein product [Vitis vinifera]	[more]
gi\|1012245432\|ref\|XP_015942075.1\|	1.4e-194	69.57	PREDICTED: probable pectate lyase 18 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002022	Pec_lyase
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G005000.1	CmaCh15G005000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 220..400 score: 5.8
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 212..409 score: 1.7
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 138..477 score: 4.4
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 138..477 score: 2.4E
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 184..209 score: 6.6E-75coord: 428..452 score: 6.6E-75coord: 220..236 score: 6.6E-75coord: 457..480 score: 6.6E-75coord: 386..405 score: 6.6E-75coord: 160..177 score: 6.6E-75coord: 364..383 score: 6.6E-75coord: 284..305 score: 6.6
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 60..487 score:
None	No IPR available	PANTHER	PTHR31683:SF11	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 60..487 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G005000	Cucsa.186200	Cucumber (Gy14) v1	cgycmaB0536
CmaCh15G005000	Cla013736	Watermelon (97103) v1	cmawmB261
CmaCh15G005000	Csa2G326460	Cucumber (Chinese Long) v2	cmacuB280
CmaCh15G005000	MELO3C019840	Melon (DHL92) v3.5.1	cmameB269
CmaCh15G005000	ClCG08G007850	Watermelon (Charleston Gray)	cmawcgB274
CmaCh15G005000	CSPI02G16060	Wild cucumber (PI 183967)	cmacpiB284
CmaCh15G005000	CmoCh04G026670	Cucurbita moschata (Rifu)	cmacmoB302
CmaCh15G005000	CmoCh15G005080	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G005000	Lsi08G006880	Bottle gourd (USVL1VR-Ls)	cmalsiB293
CmaCh15G005000	Cp4.1LG01g24660	Cucurbita pepo (Zucchini)	cmacpeB309
CmaCh15G005000	Cp4.1LG13g10220	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G005000	MELO3C019840.2	Melon (DHL92) v3.6.1	cmamedB308
CmaCh15G005000	CsaV3_2G021070	Cucumber (Chinese Long) v3	cmacucB0327
CmaCh15G005000	CsaV3_5G035910	Cucumber (Chinese Long) v3	cmacucB0349
CmaCh15G005000	Cla97C08G150600	Watermelon (97103) v2	cmawmbB320
CmaCh15G005000	Cla97C05G103030	Watermelon (97103) v2	cmawmbB310
CmaCh15G005000	Bhi07G000694	Wax gourd	cmawgoB0406
CmaCh15G005000	Bhi04G001052	Wax gourd	cmawgoB0392
CmaCh15G005000	CsGy2G016270	Cucumber (Gy14) v2	cgybcmaB190
CmaCh15G005000	CsGy5G026210	Cucumber (Gy14) v2	cgybcmaB607
CmaCh15G005000	Carg04587	Silver-seed gourd	carcmaB0962
CmaCh15G005000	Carg01697	Silver-seed gourd	carcmaB1148

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G005000	CmaCh04G025490	Cucurbita maxima (Rimu)	cmacmaB316
CmaCh15G005000	CmaCh04G013920	Cucurbita maxima (Rimu)	cmacmaB332

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G005000	Melon (DHL92) v3.5.1	cmameB271
CmaCh15G005000	Melon (DHL92) v3.5.1	cmameB273
CmaCh15G005000	Watermelon (Charleston Gray)	cmawcgB271
CmaCh15G005000	Watermelon (97103) v1	cmawmB258
CmaCh15G005000	Bottle gourd (USVL1VR-Ls)	cmalsiB294
CmaCh15G005000	Silver-seed gourd	carcmaB0961
CmaCh15G005000	Watermelon (97103) v2	cmawmbB317