CmaCh15G003500 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTGATTCCAACTTCAAAGATGACCTTCCCCTCCTCTCCAGCTTCTTCTCCGACAAAGCGGAGTCGAAACCGCCCCTCGACGACGACGACGACCGTGAGTTCTCGGGGATGGAATTAGGCTGCTCACCATCATCATCCAAGGGTTTGTTCCAAAGTTTACTCGATCATCATCATCATAATAACAATCACTTTCAATATCTTCATCAATACTTCCCCGTCGTCAACAGATCCGATTCGATCGATAATAGTAATAATTCTCATTACGATCTCGATCATCATCGCCGTCGTCTTGACGGGTCATTACAAAGCCTTCTTTCTGAGATGCCAACCCAATGTTTTGATCCAAAATTTGAAGCTTTTAGCAATGAAGCCCCCAAAGATCAGAGCTTTGAAAGTGGGGCCAAGTTCATGCATGGGTTTGCGGGGTCTGGGGGTGTTTGGACGAATTTTCCCGGAAACTTTATGCCTCAATTTTCTCAGCCGCCAAACAGCCATTTAGGGTTGGGATTGTCAGACACCATTATTGGGTATGATCACATCAAGAAGCGAAAAAGAATTCAGCTAAGAAAGGAAAACAAGCCTCCAAAGAAGCTTCCGAACATTATAAAGGGACAGTGGACTCCTCAAGAAGACAGGTAAAATCAAACGTTAATTCTTTGTGTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTGTATGTTTGAATGATTAAATCACAGCCGTTGAATTTGTGTGTGTTTTTCCAGATTATTGGTGCAATTAGTGGATGAATATGGCATAAAAAAATGGTCACAAATTGCAAAAATGCTGCAAGGAAGAGTAGGGAAGCAGTGTAGAGAGAGATGGCACAACCACCTCCGGCCAGACATTAGGGTTTTTTCCTTCTCTCTCTTCACTCTCTCTCTCTCTCCATACATATACATATACATACATACATACATACGATCTCATGTGATATCCGTACATACGCATGCCCGTCATACATTACACGTATCTATTTGTACCGACATACCATACATTTTGCATATATGTCAACATGGAATATATAGTATATCATTTAATTCACGGAATGAATGATTCGCTATCTCAACGCGTGTCGCACGTTGTATCGGAATATGACGTGACGTTTTGGTCTTTCTTCAAAGACGTATAATGTTTTTCGACACATTTTTAGAGCGTTAAACACTTTCCATGTCTACCATTTGTCTATACGTAGTTGACAACTCACGATAAATATAATTTTTTTAGGGCATATAATAAAAGAAAAATGGCCTTCCATTCTAATTCGATGAAAATTAGCCTATGTTTTGTTATTAATTTTCCTCCCAAAACTTTGCATAATTTGGGGTTTTTTTTTTTTGTAACAGTCATTTCAGACGATCATTCATTAGTTAATTGTTGTAAATAAATGATCGATGATAGCTTTTTGGGTTCAAATGGGTAACTCTCGATAACGGTTTTATTTTAGGCTTGAATTTTATTTTATTTTTTAGAATATTTTCTTTTAAAACAAATTCCTAAGAGAATTAATTATATTAATTATAGCTAAATTGTGTTTATTTTAGTATGAAAAATGCATATTGATTATTTATTTTTATTTTTTTAATTATTAAATTTGGGATGTGGGTGCAGAAAGACACGTGGAGTGAAGAAGAAGACAGAATACTAATTGAAGCCCACAAAGACATCGGAAACAAATGGGCGGAGATTGCCCGGCGGCTGCCCGGACGGACTGAAAACACCATAAAAAACCACTGGAACGCCACAAAGCGCCGCCAAAACTCCAAGAAGCTCAAAGGGAGAGATATTGATTCCAATCCCAACGGCTCGATTCTTCAAAATTACATCAAATCCGTCACCGCAGGAGATCGCAAAATCTCCGATTCGCTGCCGCTGCTGGTGGACAGCCACAGCCCTGCGGCGGAGGAGGGCGGGGGGTTCTGCTTCGGGTTCGGGTACGGATCTGGGTCCGGGTCGGGATCGGGGATGGAGTGTTTGAATCTGATGCAGAATGAAGAGATGAAATCAGAGATGGATCTGCTGGAGCTGATCTGTCAGGGGAATCTTTGA ATGGAGTTTGATTCCAACTTCAAAGATGACCTTCCCCTCCTCTCCAGCTTCTTCTCCGACAAAGCGGAGTCGAAACCGCCCCTCGACGACGACGACGACCGTGAGTTCTCGGGGATGGAATTAGGCTGCTCACCATCATCATCCAAGGGTTTGTTCCAAAGTTTACTCGATCATCATCATCATAATAACAATCACTTTCAATATCTTCATCAATACTTCCCCGTCGTCAACAGATCCGATTCGATCGATAATAGTAATAATTCTCATTACGATCTCGATCATCATCGCCGTCGTCTTGACGGGTCATTACAAAGCCTTCTTTCTGAGATGCCAACCCAATGTTTTGATCCAAAATTTGAAGCTTTTAGCAATGAAGCCCCCAAAGATCAGAGCTTTGAAAGTGGGGCCAAGTTCATGCATGGGTTTGCGGGGTCTGGGGGTGTTTGGACGAATTTTCCCGGAAACTTTATGCCTCAATTTTCTCAGCCGCCAAACAGCCATTTAGGGTTGGGATTGTCAGACACCATTATTGGGTATGATCACATCAAGAAGCGAAAAAGAATTCAGCTAAGAAAGGAAAACAAGCCTCCAAAGAAGCTTCCGAACATTATAAAGGGACAGTGGACTCCTCAAGAAGACAGATTATTGGTGCAATTAGTGGATGAATATGGCATAAAAAAATGGTCACAAATTGCAAAAATGCTGCAAGGAAGAGTAGGGAAGCAGTGTAGAGAGAGATGGCACAACCACCTCCGGCCAGACATTAGGAAAGACACGTGGAGTGAAGAAGAAGACAGAATACTAATTGAAGCCCACAAAGACATCGGAAACAAATGGGCGGAGATTGCCCGGCGGCTGCCCGGACGGACTGAAAACACCATAAAAAACCACTGGAACGCCACAAAGCGCCGCCAAAACTCCAAGAAGCTCAAAGGGAGAGATATTGATTCCAATCCCAACGGCTCGATTCTTCAAAATTACATCAAATCCGTCACCGCAGGAGATCGCAAAATCTCCGATTCGCTGCCGCTGCTGGTGGACAGCCACAGCCCTGCGGCGGAGGAGGGCGGGGGGTTCTGCTTCGGGTTCGGGTACGGATCTGGGTCCGGGTCGGGATCGGGGATGGAGTGTTTGAATCTGATGCAGAATGAAGAGATGAAATCAGAGATGGATCTGCTGGAGCTGATCTGTCAGGGGAATCTTTGA ATGGAGTTTGATTCCAACTTCAAAGATGACCTTCCCCTCCTCTCCAGCTTCTTCTCCGACAAAGCGGAGTCGAAACCGCCCCTCGACGACGACGACGACCGTGAGTTCTCGGGGATGGAATTAGGCTGCTCACCATCATCATCCAAGGGTTTGTTCCAAAGTTTACTCGATCATCATCATCATAATAACAATCACTTTCAATATCTTCATCAATACTTCCCCGTCGTCAACAGATCCGATTCGATCGATAATAGTAATAATTCTCATTACGATCTCGATCATCATCGCCGTCGTCTTGACGGGTCATTACAAAGCCTTCTTTCTGAGATGCCAACCCAATGTTTTGATCCAAAATTTGAAGCTTTTAGCAATGAAGCCCCCAAAGATCAGAGCTTTGAAAGTGGGGCCAAGTTCATGCATGGGTTTGCGGGGTCTGGGGGTGTTTGGACGAATTTTCCCGGAAACTTTATGCCTCAATTTTCTCAGCCGCCAAACAGCCATTTAGGGTTGGGATTGTCAGACACCATTATTGGGTATGATCACATCAAGAAGCGAAAAAGAATTCAGCTAAGAAAGGAAAACAAGCCTCCAAAGAAGCTTCCGAACATTATAAAGGGACAGTGGACTCCTCAAGAAGACAGATTATTGGTGCAATTAGTGGATGAATATGGCATAAAAAAATGGTCACAAATTGCAAAAATGCTGCAAGGAAGAGTAGGGAAGCAGTGTAGAGAGAGATGGCACAACCACCTCCGGCCAGACATTAGGAAAGACACGTGGAGTGAAGAAGAAGACAGAATACTAATTGAAGCCCACAAAGACATCGGAAACAAATGGGCGGAGATTGCCCGGCGGCTGCCCGGACGGACTGAAAACACCATAAAAAACCACTGGAACGCCACAAAGCGCCGCCAAAACTCCAAGAAGCTCAAAGGGAGAGATATTGATTCCAATCCCAACGGCTCGATTCTTCAAAATTACATCAAATCCGTCACCGCAGGAGATCGCAAAATCTCCGATTCGCTGCCGCTGCTGGTGGACAGCCACAGCCCTGCGGCGGAGGAGGGCGGGGGGTTCTGCTTCGGGTTCGGGTACGGATCTGGGTCCGGGTCGGGATCGGGGATGGAGTGTTTGAATCTGATGCAGAATGAAGAGATGAAATCAGAGATGGATCTGCTGGAGCTGATCTGTCAGGGGAATCTTTGA MEFDSNFKDDLPLLSSFFSDKAESKPPLDDDDDREFSGMELGCSPSSSKGLFQSLLDHHHHNNNHFQYLHQYFPVVNRSDSIDNSNNSHYDLDHHRRRLDGSLQSLLSEMPTQCFDPKFEAFSNEAPKDQSFESGAKFMHGFAGSGGVWTNFPGNFMPQFSQPPNSHLGLGLSDTIIGYDHIKKRKRIQLRKENKPPKKLPNIIKGQWTPQEDRLLVQLVDEYGIKKWSQIAKMLQGRVGKQCRERWHNHLRPDIRKDTWSEEEDRILIEAHKDIGNKWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGRDIDSNPNGSILQNYIKSVTAGDRKISDSLPLLVDSHSPAAEEGGGFCFGFGYGSGSGSGSGMECLNLMQNEEMKSEMDLLELICQGNL
BLAST of CmaCh15G003500 vs. Swiss-Prot
Match: MYB98_ARATH (Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 8.1e-51 Identity = 93/136 (68.38%), Postives = 116/136 (85.29%), Query Frame = 1
BLAST of CmaCh15G003500 vs. Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2) HSP 1 Score: 164.1 bits (414), Expect = 3.2e-39 Identity = 87/191 (45.55%), Postives = 128/191 (67.02%), Query Frame = 1
BLAST of CmaCh15G003500 vs. Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=1 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 5.5e-39 Identity = 81/158 (51.27%), Postives = 115/158 (72.78%), Query Frame = 1
BLAST of CmaCh15G003500 vs. Swiss-Prot
Match: MYB_XENLA (Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 9.3e-39 Identity = 71/130 (54.62%), Postives = 100/130 (76.92%), Query Frame = 1
BLAST of CmaCh15G003500 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 9.3e-39 Identity = 79/153 (51.63%), Postives = 111/153 (72.55%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TrEMBL
Match: A0A061EBY4_THECC (Myb domain protein 118, putative OS=Theobroma cacao GN=TCM_016909 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 2.4e-62 Identity = 180/410 (43.90%), Postives = 231/410 (56.34%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TrEMBL
Match: V4KZ10_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10005564mg PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.3e-59 Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TrEMBL
Match: M5X7L2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019507mg PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.3e-58 Identity = 117/164 (71.34%), Postives = 135/164 (82.32%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TrEMBL
Match: W9S0Q4_9ROSA (Transcription factor OS=Morus notabilis GN=L484_020528 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58 Identity = 114/151 (75.50%), Postives = 132/151 (87.42%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TrEMBL
Match: V4U1M7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017526mg PE=4 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 3.1e-57 Identity = 160/361 (44.32%), Postives = 209/361 (57.89%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TAIR10
Match: AT3G27785.1 (AT3G27785.1 myb domain protein 118) HSP 1 Score: 229.9 bits (585), Expect = 2.7e-60 Identity = 114/154 (74.03%), Postives = 133/154 (86.36%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TAIR10
Match: AT4G18770.1 (AT4G18770.1 myb domain protein 98) HSP 1 Score: 202.6 bits (514), Expect = 4.6e-52 Identity = 93/136 (68.38%), Postives = 116/136 (85.29%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TAIR10
Match: AT5G58850.1 (AT5G58850.1 myb domain protein 119) HSP 1 Score: 187.2 bits (474), Expect = 2.0e-47 Identity = 88/140 (62.86%), Postives = 113/140 (80.71%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TAIR10
Match: AT5G40360.1 (AT5G40360.1 myb domain protein 115) HSP 1 Score: 186.4 bits (472), Expect = 3.4e-47 Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 1
BLAST of CmaCh15G003500 vs. TAIR10
Match: AT5G11050.1 (AT5G11050.1 myb domain protein 64) HSP 1 Score: 183.3 bits (464), Expect = 2.9e-46 Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 1
BLAST of CmaCh15G003500 vs. NCBI nr
Match: gi|449450203|ref|XP_004142853.1| (PREDICTED: transcription factor MYB98 [Cucumis sativus]) HSP 1 Score: 564.3 bits (1453), Expect = 1.7e-157 Identity = 318/439 (72.44%), Postives = 351/439 (79.95%), Query Frame = 1
BLAST of CmaCh15G003500 vs. NCBI nr
Match: gi|659118045|ref|XP_008458923.1| (PREDICTED: transcription factor MYB98-like [Cucumis melo]) HSP 1 Score: 529.6 bits (1363), Expect = 4.6e-147 Identity = 306/441 (69.39%), Postives = 338/441 (76.64%), Query Frame = 1
BLAST of CmaCh15G003500 vs. NCBI nr
Match: gi|590646051|ref|XP_007031515.1| (Myb domain protein 118, putative [Theobroma cacao]) HSP 1 Score: 247.7 bits (631), Expect = 3.5e-62 Identity = 180/410 (43.90%), Postives = 231/410 (56.34%), Query Frame = 1
BLAST of CmaCh15G003500 vs. NCBI nr
Match: gi|645249874|ref|XP_008230943.1| (PREDICTED: transcription factor MYB98-like [Prunus mume]) HSP 1 Score: 244.2 bits (622), Expect = 3.9e-61 Identity = 142/242 (58.68%), Postives = 166/242 (68.60%), Query Frame = 1
BLAST of CmaCh15G003500 vs. NCBI nr
Match: gi|567141616|ref|XP_006395402.1| (hypothetical protein EUTSA_v10005564mg [Eutrema salsugineum]) HSP 1 Score: 236.9 bits (603), Expect = 6.2e-59 Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |