CmaCh15G003040 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G003040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Matrix metalloproteinase
Location	Cma_Chr15 : 1415939 .. 1416966 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAATATAAGACACACGGGCTTTGTCTCCGACTTTAAAACCAACCCAAACTCGAACCTTCTTCACACATCAATCCTTCTAATTTCATGACAATTACTGTCGGTTGCTGCTGCTTCTCGCCTTCATTGTGACACAATATCTACTACTCAATGTGAATAGATCTAAAAATATTATTATCAAGTAAACAATACAAAGATAAGAATGAGAAAATAAAATTGAAATCAAAGGTTCAATATATTCACAAGGTTTAAATTGAATATAAGCTACCAACTAATACCTACTCAAAATATAAGCTAACCATGAGAATAAAATAAAATATACTACTAATAATCAAATGAAAAATATTAACTGATTCAATAACTAATATCTTTTCCAAATATTAAAATATCTTGACTAATTCAAATTAGCAATAAGTTGCACTAAATTTTAAAATACTTATAATTAATATAGAACGGATTAAGAAAATATTTGACTAATTCACCTTTATCATTAATATATTTCCAAAATATTAAGAATATCTTAATTAATTTAAACTAGCAATCAGTTGCACTAAATTCTAATATATATTTGGTCCCGTGAGAAGATGCATTTGACATACAGATTCATTCACAATTACCCACCCAAGTTTGTGGCTCAAGTGATTCGAGCTTTTGAGACATGAGACATGGGAGGCCAGCACCAATTTCACCTTCTCCCAGTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA

mRNA sequence

ATGCCAAATATAAGACACACGGGCTTTTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA

Coding sequence (CDS)

ATGCCAAATATAAGACACACGGGCTTTTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA

Protein sequence

MPNIRHTGFLARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESVALHEIGHAHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIYPD

Homology

[Close]

BLAST of CmaCh15G003040 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRI-------LH 74
           T+DI + F  G+ GDG P DG  G LAH F P  G+ H DAD+ W  S  +         
Sbjct: 212 TSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAA 271

Query: 75  NDLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
            DLESVA+HEIGH     H+ V++++M+P I  G  K  L + D+ GI  +Y
Sbjct: 272 VDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]

BLAST of CmaCh15G003040 vs. Swiss-Prot
Match: 5MMP_ARATH (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-18
Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 1


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW-----DWSVRILHN-- 75
           ADI + F  GE GDG P DG  G LAH   P  G +H D D+ W     + S RIL    
Sbjct: 201 ADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTT 260

Query: 76  --DLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
             DLESVA+HEIGH     H+ V+DA+M+P I+ G  K  L   DI GI  +Y
Sbjct: 261 VVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]

BLAST of CmaCh15G003040 vs. Swiss-Prot
Match: 4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-18
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW----DWSVRILHNDLE 75
           ADI++ F  G+ GDG P DG  GVLAH F P +GR+H D  + W    D     +  DLE
Sbjct: 188 ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLE 247

Query: 76  SVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           SVA+HEIGH     H+ V+DA M+P +     K +L+  D+ G+ ++Y
Sbjct: 248 SVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of CmaCh15G003040 vs. Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 14  QTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHN----- 73
           +TA+I++ F     GD +P DG GG+L H F P DGR HFDAD+ W  S  +  +     
Sbjct: 190 ETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSA 249

Query: 74  -DLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
            DLESVA+HEIGH     H+    A+M+P I     K +L   DI+GI  +Y
Sbjct: 250 FDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLY 301

[Close]

BLAST of CmaCh15G003040 vs. Swiss-Prot
Match: 1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-15
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 1


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHN-----D 74
           TAD+++ F  G+ GDG P DG  G LAH F P +GR+H DA + W     +  +     D
Sbjct: 209 TADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVD 268

Query: 75  LESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           LESVA HEIGH     H+  + AVM+P +     K  L   D+ G+  +Y
Sbjct: 269 LESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

[Close]

BLAST of CmaCh15G003040 vs. TrEMBL
Match: A0A0A0KS35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632070 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.1e-26
Identity = 66/119 (55.46%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 3   NIRHTGFLA-RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWD- 62
           N + T  LA R+QTADI LSFERG+ GDG P DG GG+L H FGPIDGR+HFDAD+QW  
Sbjct: 185 NSKFTFSLAWRIQTADILLSFERGDHGDGKPFDGEGGILGHAFGPIDGRVHFDADEQWAE 244

Query: 63  -WSVRILHNDLESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAI 115
             S+   + D ESVALHEIGHA    H+    AVMW  +  G  KT L   DI G+ A+
Sbjct: 245 IGSLTNENFDFESVALHEIGHALGLGHSIFPSAVMWANMETGVNKTELTIDDIEGVHAL 303

[Close]

BLAST of CmaCh15G003040 vs. TrEMBL
Match: A0A0A0KVC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632060 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-24
Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 3   NIRHTGFLA-RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDW 62
           N + + FL+ RVQTADI +SFERGE GD  P DG GG+LAH  G +DGR+HFDAD +W+ 
Sbjct: 185 NTKFSFFLSPRVQTADILVSFERGEHGDHEPFDGEGGILAHSLGAVDGRVHFDADDRWEG 244

Query: 63  SVRILHNDLESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
              +   DLE++ALHEIGHA    H+    A+MW  +  GF KT L   DI GI A+Y
Sbjct: 245 D-PMERYDLETLALHEIGHALGLGHSSSSLAIMWAYMYKGFPKTRLTIDDIEGIRALY 301

[Close]

BLAST of CmaCh15G003040 vs. TrEMBL
Match: A0A166BQ58_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011487 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.5e-23
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 1


Query: 14  QTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESV 73
           Q++D+ ++F RG+ GDG   DG GGV+AH F P DGR+HFDAD+ W       + DLESV
Sbjct: 243 QSSDLTVTFYRGDHGDGSAFDGPGGVIAHAFFPTDGRLHFDADEPWSIGAIPNYVDLESV 302

Query: 74  ALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           ALH+IGH     H+ V DA+M+P I++G  KT+ H  D  GI A+Y
Sbjct: 303 ALHQIGHLLGLGHSTVPDAIMYPGISYGVVKTNFHPDDRQGIKALY 348

[Close]

BLAST of CmaCh15G003040 vs. TrEMBL
Match: A0A0A0KS47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633160 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.4e-23
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 1


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDL 70
           ++ + ADI++SFE+G+ GDG P D  GGVLAH F P DGR+HFDA + W         D+
Sbjct: 203 SKYENADIKISFEKGDHGDGFPFDSVGGVLAHAFAPTDGRLHFDAVEHWADGAVPKSYDM 262

Query: 71  ESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           E+VALHEIGH     H+ V+ A+MWP I  G TK  LH  DI GI  +Y
Sbjct: 263 ETVALHEIGHLLGLHHSSVEGAIMWPSIMGGATK-GLHADDIEGIKVLY 310

[Close]

BLAST of CmaCh15G003040 vs. TrEMBL
Match: Q9LEL9_CUCSA (Matrix metalloproteinase OS=Cucumis sativus GN=MMP-1 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-22
Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = 1


Query: 10  LARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHND 69
           +A  + ADI++SFERGE GD  P DG GGVLAH + P DGR+HFD D  W       + D
Sbjct: 210 VADYRKADIKISFERGEHGDNAPFDGVGGVLAHAYAPTDGRLHFDGDDAWSVGAISGYFD 269

Query: 70  LESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +E+VALHEIGH     H+ +++A+M+P I  G TK  LH  DI GI A+Y
Sbjct: 270 VETVALHEIGHILGLQHSTIEEAIMFPSIPEGVTK-GLHGDDIAGIKALY 318

[Close]

BLAST of CmaCh15G003040 vs. TAIR10
Match: AT1G70170.1 (AT1G70170.1 matrix metalloproteinase)

HSP 1 Score: 93.6 bits (231), Expect = 8.7e-20
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 1


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRI-------LH 74
           T+DI + F  G+ GDG P DG  G LAH F P  G+ H DAD+ W  S  +         
Sbjct: 212 TSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAA 271

Query: 75  NDLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
            DLESVA+HEIGH     H+ V++++M+P I  G  K  L + D+ GI  +Y
Sbjct: 272 VDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]

BLAST of CmaCh15G003040 vs. TAIR10
Match: AT1G59970.1 (AT1G59970.1 Matrixin family protein)

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-19
Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 1


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW-----DWSVRILHN-- 75
           ADI + F  GE GDG P DG  G LAH   P  G +H D D+ W     + S RIL    
Sbjct: 201 ADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTT 260

Query: 76  --DLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
             DLESVA+HEIGH     H+ V+DA+M+P I+ G  K  L   DI GI  +Y
Sbjct: 261 VVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]

BLAST of CmaCh15G003040 vs. TAIR10
Match: AT2G45040.1 (AT2G45040.1 Matrixin family protein)

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-19
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 1


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW----DWSVRILHNDLE 75
           ADI++ F  G+ GDG P DG  GVLAH F P +GR+H D  + W    D     +  DLE
Sbjct: 188 ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLE 247

Query: 76  SVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           SVA+HEIGH     H+ V+DA M+P +     K +L+  D+ G+ ++Y
Sbjct: 248 SVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of CmaCh15G003040 vs. TAIR10
Match: AT1G24140.1 (AT1G24140.1 Matrixin family protein)

HSP 1 Score: 87.4 bits (215), Expect = 6.2e-18
Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 12  RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW-------DWSVR 71
           R  T+DI + F  GE GDG P DG    LAH F P  G  H D ++ W       D  + 
Sbjct: 213 RFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFIS 272

Query: 72  ILHN-DLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +    DLESVA+HEIGH     H+ V+ ++M+P I  G  K  L   D+ G+  +Y
Sbjct: 273 VSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 328

[Close]

BLAST of CmaCh15G003040 vs. TAIR10
Match: AT4G16640.1 (AT4G16640.1 Matrixin family protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.5e-16
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 1


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHN-----D 74
           TAD+++ F  G+ GDG P DG  G LAH F P +GR+H DA + W     +  +     D
Sbjct: 209 TADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVD 268

Query: 75  LESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           LESVA HEIGH     H+  + AVM+P +     K  L   D+ G+  +Y
Sbjct: 269 LESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: gi|659118025|ref|XP_008458911.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-27
Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 1


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWD-WSVRILHND 70
           ARVQTADI LSFERG+ GDG P DG GG L H FG IDGR+HFD D+QW+  S    + D
Sbjct: 193 ARVQTADILLSFERGDHGDGKPFDGPGGALGHAFGAIDGRVHFDGDEQWETGSFWQEYFD 252

Query: 71  LESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +ESVALHEIGHA    H+    AVMW  ++ G TKTHL   DI GI A+Y
Sbjct: 253 VESVALHEIGHALGLGHSREPSAVMWANMDSGVTKTHLTIDDIEGIHALY 302

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: gi|659118027|ref|XP_008458912.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26
Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 3   NIRHTGFLA-RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDW 62
           N + + FLA RVQTADI +SFERGE GD  P DG GG+LAH  G +DGR+HFDAD+QW+ 
Sbjct: 185 NTKFSFFLAPRVQTADILVSFERGEHGDDEPFDGPGGILAHSLGAVDGRVHFDADEQWEG 244

Query: 63  SVRILHNDLESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
                  DLE++ALHE+GHA    H+    AVMW  +  GF KT L   DI GI A+Y
Sbjct: 245 GPVEKRYDLETLALHELGHALGLGHSSSSLAVMWAYMYAGFPKTRLTIDDIEGIRALY 302

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: gi|778708735|ref|XP_004142466.2| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25
Identity = 66/119 (55.46%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 3   NIRHTGFLA-RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWD- 62
           N + T  LA R+QTADI LSFERG+ GDG P DG GG+L H FGPIDGR+HFDAD+QW  
Sbjct: 185 NSKFTFSLAWRIQTADILLSFERGDHGDGKPFDGEGGILGHAFGPIDGRVHFDADEQWAE 244

Query: 63  -WSVRILHNDLESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAI 115
             S+   + D ESVALHEIGHA    H+    AVMW  +  G  KT L   DI G+ A+
Sbjct: 245 IGSLTNENFDFESVALHEIGHALGLGHSIFPSAVMWANMETGVNKTELTIDDIEGVHAL 303

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: gi|470123775|ref|XP_004297896.1| (PREDICTED: metalloendoproteinase 1-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESVAL 75
           ADI++SFE+G+ GDG   DG GG+LAH + P  G++H+DAD+ W       + DLE+VAL
Sbjct: 207 ADIKISFEQGDHGDGSSFDGTGGILAHAYAPTYGKLHYDADEPWSIGALEGYYDLETVAL 266

Query: 76  HEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           HEIGH    AH+  +DA+M+P I+ G TK  LHH DI+GI A+Y
Sbjct: 267 HEIGHLLGLAHSSEEDAIMYPYISSGVTKLDLHHDDIHGIRALY 310

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: gi|449449429|ref|XP_004142467.1| (PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-24
Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 1


Query: 3   NIRHTGFLA-RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDW 62
           N + + FL+ RVQTADI +SFERGE GD  P DG GG+LAH  G +DGR+HFDAD +W+ 
Sbjct: 185 NTKFSFFLSPRVQTADILVSFERGEHGDHEPFDGEGGILAHSLGAVDGRVHFDADDRWEG 244

Query: 63  SVRILHNDLESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
              +   DLE++ALHEIGHA    H+    A+MW  +  GF KT L   DI GI A+Y
Sbjct: 245 D-PMERYDLETLALHEIGHALGLGHSSSSLAIMWAYMYKGFPKTRLTIDDIEGIRALY 301

The following BLAST results are available for this feature:

BLAST of CmaCh15G003040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
2MMP_ARATH	1.5e-18	41.96	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1	[more]
5MMP_ARATH	2.0e-18	46.02	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1	[more]
4MMP_ARATH	4.5e-18	42.59	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1	[more]
MEP1_SOYBN	1.0e-17	42.86	Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2	[more]
1MMP_ARATH	2.7e-15	40.00	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1	[more]

BLAST of CmaCh15G003040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS35_CUCSA	9.1e-26	55.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632070 PE=3 SV=1	[more]
A0A0A0KVC8_CUCSA	1.7e-24	52.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632060 PE=3 SV=1	[more]
A0A166BQ58_DAUCA	5.5e-23	50.00	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011487 PE=4 SV=1	[more]
A0A0A0KS47_CUCSA	9.4e-23	50.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633160 PE=3 SV=1	[more]
Q9LEL9_CUCSA	1.2e-22	50.91	Matrix metalloproteinase OS=Cucumis sativus GN=MMP-1 PE=2 SV=1	[more]

BLAST of CmaCh15G003040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70170.1	8.7e-20	41.96	matrix metalloproteinase	[more]
AT1G59970.1	1.1e-19	46.02	Matrixin family protein	[more]
AT2G45040.1	2.5e-19	42.59	Matrixin family protein	[more]
AT1G24140.1	6.2e-18	38.79	Matrixin family protein	[more]
AT4G16640.1	1.5e-16	40.00	Matrixin family protein	[more]

BLAST of CmaCh15G003040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118025\|ref\|XP_008458911.1\|	4.1e-27	60.00	PREDICTED: metalloendoproteinase 1-like [Cucumis melo]	[more]
gi\|659118027\|ref\|XP_008458912.1\|	2.0e-26	54.24	PREDICTED: metalloendoproteinase 1-like [Cucumis melo]	[more]
gi\|778708735\|ref\|XP_004142466.2\|	1.3e-25	55.46	PREDICTED: metalloendoproteinase 1-like [Cucumis sativus]	[more]
gi\|470123775\|ref\|XP_004297896.1\|	1.4e-24	51.92	PREDICTED: metalloendoproteinase 1-like [Fragaria vesca subsp. vesca]	[more]
gi\|449449429\|ref\|XP_004142467.1\|	2.5e-24	52.54	PREDICTED: matrix metalloproteinase-9-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001818	Pept_M10_metallopeptidase
IPR021190	Pept_M10A
IPR024079	MetalloPept_cat_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008270	zinc ion binding
GO:0008237	metallopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0031012	extracellular matrix

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003040.1	CmaCh15G003040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 12..115 score: 2.6
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 16..44 score: 1.8E-14coord: 103..116 score: 1.8E-14coord: 69..94 score: 1.8
IPR024079	Metallopeptidase, catalytic domain	GENE3D	G3DSA:3.40.390.10		coord: 14..115 score: 8.9
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 11..115 score: 4.1
None	No IPR available	PANTHER	PTHR10201:SF152	SUBFAMILY NOT NAMED	coord: 11..115 score: 4.1
None	No IPR available	unknown	SSF55486	Metalloproteases ("zincins"), catalytic domain	coord: 14..116 score: 3.54

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G003040	CmoCh15G003160	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G003040	Lsi02G015260	Bottle gourd (USVL1VR-Ls)	cmalsiB272
CmaCh15G003040	Cp4.1LG13g08880	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G003040	MELO3C021504.2	Melon (DHL92) v3.6.1	cmamedB285
CmaCh15G003040	CsaV3_5G037640	Cucumber (Chinese Long) v3	cmacucB0353
CmaCh15G003040	Cla97C09G180020	Watermelon (97103) v2	cmawmbB322
CmaCh15G003040	Bhi06G000389	Wax gourd	cmawgoB0380
CmaCh15G003040	CsGy5G027880	Cucumber (Gy14) v2	cgybcmaB609
CmaCh15G003040	Carg02277	Silver-seed gourd	carcmaB0362

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G003040	CmaCh04G027330	Cucurbita maxima (Rimu)	cmacmaB324

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G003040	Cucurbita pepo (Zucchini)	cmacpeB317
CmaCh15G003040	Melon (DHL92) v3.6.1	cmamedB305
CmaCh15G003040	Silver-seed gourd	carcmaB0961
CmaCh15G003040	Cucumber (Chinese Long) v3	cmacucB0323
CmaCh15G003040	Cucurbita maxima (Rimu)	cmacmaB303
CmaCh15G003040	Cucumber (Gy14) v1	cgycmaB0212
CmaCh15G003040	Cucumber (Gy14) v1	cgycmaB0439
CmaCh15G003040	Cucurbita moschata (Rifu)	cmacmoB308
CmaCh15G003040	Wild cucumber (PI 183967)	cmacpiB304
CmaCh15G003040	Cucumber (Chinese Long) v2	cmacuB299
CmaCh15G003040	Melon (DHL92) v3.5.1	cmameB251
CmaCh15G003040	Melon (DHL92) v3.5.1	cmameB266
CmaCh15G003040	Watermelon (Charleston Gray)	cmawcgB244
CmaCh15G003040	Watermelon (97103) v1	cmawmB252