CmaCh14G020610 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G020610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	50S ribosomal protein L5, putative
Location	Cma_Chr14 : 14318703 .. 14321442 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATTCGTAATAATATGGAAATACGAGGATATACTCGGGACTGGAAATTGCACAAACACCCTTTGGCTAAAGTTATCTTCTAATTCACCTCTTTCCCTGCGCGAAAAGTAGAAACATCGCTGAAGCTCCGATGGCTTCTTCTTCGCTGTTGAGTTCCGCTATGTCGTCATTTCATGGCCATTCCCAATTAGTCTCGGCCCATTTTCCTGCACCGACTGCCCTCGGATACCCTAGCAATGTAGCTTCATTGGCGGTGAGGGTAAAAGCCTCGACTGGAGGTGCTATAGTGCTTGTCGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAATCAAACTACCTTGAGAAAATTGTGCCGATGCTTATGGATGAGTTCTCATACTCCAATATCCACCAGGTATTGACAGCGTAAATTGGGAGGTGTTGATTGAATTCTCGATTTATTAGCTCAATTGATCGCTGGAGTTCGTCGGCTTTTAATTCGGTAGAAGTTGGGTTGGATTCTGACTACATTGTTTTTGTTGTTCCGGAATGTTAATTTGTGTGTTCTGTAACTGTTTTTGTAATTGTTTCTTCTTATGTCAATTCATGGAATTCGACTATGCATATAAAATCTTGGCTTAGCGGGGCTTTCACTTTCATTTTATGGAGAGAAAGGAGCATCAATATAATGAGGCACGAGTATTTCTATGTTTGTATGCAAGTATTTACACCCACGTGGAAGATAAGGATTCTCGATGGATTAAGAACCTTGAAATCTGGGACCAAATTCATTTTTGTACTCAGCATTCTCCTAGATTAAGTTGATTTTTCATTTCTGGCTGTAATTTCAGTTACCGGGTCTCGAAGATTTTTGATTTTAGTGTTTTTCCCCTCCATCAAAAAGAATTGGCAACCCATATGATGACTAAACACAAATTCTTACGAAATATCTGTACCTTTTCTGTTAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAGGGTTTGGAAGCTGCAATGAGTGAGTTAGCATCCATTACAGGACAACGACCTGTGAAAACACGTGCAAAGAAGGCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACTTGGGATTGCTGCTACCCTACGGGGAAATGTGAGTTTCACTTGTTCCTTTTAGAATTATGAGCTCGTCATTGTTTCTATGGATCTTCTTCTGTTATAGTCCTCAATGCTACTTGGTTTGATATATCTTGATACGGAAAATGCATGTTGATATTTGGAACTGGCTCTGATTTTCAATGCTCGTAGTCATAAACATTCCTTATGTTCCTTGTGATCAGTATGTGCTTTTTTTGTGGTTGGTCTAGTGCATTTCTCTTGTATGATGTTGTTGGGAATTCGATTCTTCGAGTTAATAGTCTAAACGAAGTGCAAAGGAATGACTTTGGAGGGGAGGGAGTTGCTCCTTCATGTCACGGGCTCAATGCACATCACCATAATACTCAGTTTAATGAAAAAGAGTTTTGTGCCTGTTATTGACGAGTCGAAAGGACAAAAGAGATGGGGGATTCTCGTGTATTGTTATAATGTAAGGTAACTAGTATCATCAAATGGAAGAAGTCATGCGTGTGGATGCAGCCACTTGTTGTATTATTTTGATTATCTGTAAATGCGTCAATGTGTTTTGTGCAGTGGATTTCTCTGTATAATGATATTAGGAATTCGATTCTTTGATATAACTGTCCAAAACAAGTGCGAAGGAATGGCCTCGGAGTAGGGAGTTCCTCCTTCACAGTCTTGATACTTGTTTAGTGAACAAGATTTTTGTGTCCATTATTATGGAATATGTGGAAGGACAAAAAATCTAAGGGGTATTAAAGATCTGGTGTCGTAATAATGGAAGAAGTTTTGGGTGTTGCTGCTGGCATTTGTCTTAAATGTTAAAACGACTTGATTCTTATGCTGCTTGCTTGCTGACTGCACTTATAGGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGCTCCCTCGAACAAGGGACTTTCAGGGACTGAACTCAAACAGCTTTGATGGACATGGAAATTACTCCATTGGGATCCGGGAGCAGAGCGTGTTCCCAGAAATAAAGTTCGACACGCTTAGCAGACCGAGGGGAATGGACGTTTGTATCACAACGACAGCTGAAACTGATCAAGAAGCTCAACGACTCTTGGCACTCATGGGAATGCCTTTCAGAGAAAGTGCTGGTTCTGCATCTGGGCTGCGTAAAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGATCTCGGAGGTAATGAATACATTTTAGGAAGAAGACTTTTATATTTCCTCAATTCATTTGCTGTTCTTTACTTGAAGAAACTGTACTCTACCAAATTTAGCTGGATTGTATGCCAATTTTATGAAGTTATAGAGGTTTGTTTATGAGAGTAGTTCCTTTAACCCCGAAATTCTATCTGAAATTTGAGTCCTGAACAGTATTTTAGCATCGGATGCTGCATTTGAACAGTATTCCCATAGCCATTGCTCAAACCATAGGCCCTTGCTCTGAATAGTAAGAGAGAGATAATACCTAAAGAAACCAAACTTTTGTTTGAGAATTTGGACAAACAGTCGAACTAGATTTAAAGCTGCATCACTAGTTAGTTACCGTAAGTTATAGCATGTGAACTTATTGTCATTGTCCCCCTAAGAACAGGGAAG

mRNA sequence

GTTTATTCGTAATAATATGGAAATACGAGGATATACTCGGGACTGGAAATTGCACAAACACCCTTTGGCTAAAGTTATCTTCTAATTCACCTCTTTCCCTGCGCGAAAAGTAGAAACATCGCTGAAGCTCCGATGGCTTCTTCTTCGCTGTTGAGTTCCGCTATGTCGTCATTTCATGGCCATTCCCAATTAGTCTCGGCCCATTTTCCTGCACCGACTGCCCTCGGATACCCTAGCAATGTAGCTTCATTGGCGGTGAGGGTAAAAGCCTCGACTGGAGGTGCTATAGTGCTTGTCGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAATCAAACTACCTTGAGAAAATTGTGCCGATGCTTATGGATGAGTTCTCATACTCCAATATCCACCAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAGGGTTTGGAAGCTGCAATGAGTGAGTTAGCATCCATTACAGGACAACGACCTGTGAAAACACGTGCAAAGAAGGCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACTTGGGATTGCTGCTACCCTACGGGGAAATGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGCTCCCTCGAACAAGGGACTTTCAGGGACTGAACTCAAACAGCTTTGATGGACATGGAAATTACTCCATTGGGATCCGGGAGCAGAGCGTGTTCCCAGAAATAAAGTTCGACACGCTTAGCAGACCGAGGGGAATGGACGTTTGTATCACAACGACAGCTGAAACTGATCAAGAAGCTCAACGACTCTTGGCACTCATGGGAATGCCTTTCAGAGAAAGTGCTGGTTCTGCATCTGGGCTGCGTAAAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGATCTCGGAGGTAATGAATACATTTTAGGAAGAAGACTTTTATATTTCCTCAATTCATTTGCTGTTCTTTACTTGAAGAAACTGTACTCTACCAAATTTAGCTGGATTGTATGCCAATTTTATGAAGTTATAGAGGTTTGTTTATGAGAGTAGTTCCTTTAACCCCGAAATTCTATCTGAAATTTGAGTCCTGAACAGTATTTTAGCATCGGATGCTGCATTTGAACAGTATTCCCATAGCCATTGCTCAAACCATAGGCCCTTGCTCTGAATAGTAAGAGAGAGATAATACCTAAAGAAACCAAACTTTTGTTTGAGAATTTGGACAAACAGTCGAACTAGATTTAAAGCTGCATCACTAGTTAGTTACCGTAAGTTATAGCATGTGAACTTATTGTCATTGTCCCCCTAAGAACAGGGAAG

Coding sequence (CDS)

ATGGCTTCTTCTTCGCTGTTGAGTTCCGCTATGTCGTCATTTCATGGCCATTCCCAATTAGTCTCGGCCCATTTTCCTGCACCGACTGCCCTCGGATACCCTAGCAATGTAGCTTCATTGGCGGTGAGGGTAAAAGCCTCGACTGGAGGTGCTATAGTGCTTGTCGAGAAGGCAGAGGCTGAGAAGGTCAACCGGCTCAAATCAAACTACCTTGAGAAAATTGTGCCGATGCTTATGGATGAGTTCTCATACTCCAATATCCACCAGGTTCCCAAAATTGAGAAGATAGTAGTGAACTGTGGTATTGGAGATGCTCAGCAGAATGCGAAGGGTTTGGAAGCTGCAATGAGTGAGTTAGCATCCATTACAGGACAACGACCTGTGAAAACACGTGCAAAGAAGGCCATTGCAACCTTCAAGATCAGGGAGGGTCAACCACTTGGGATTGCTGCTACCCTACGGGGAAATGTGATGTACTCCTTCCTGGATCGTCTGATCAACTTGGGGCTCCCTCGAACAAGGGACTTTCAGGGACTGAACTCAAACAGCTTTGATGGACATGGAAATTACTCCATTGGGATCCGGGAGCAGAGCGTGTTCCCAGAAATAAAGTTCGACACGCTTAGCAGACCGAGGGGAATGGACGTTTGTATCACAACGACAGCTGAAACTGATCAAGAAGCTCAACGACTCTTGGCACTCATGGGAATGCCTTTCAGAGAAAGTGCTGGTTCTGCATCTGGGCTGCGTAAAAAGAAGCTGAAGTCCCACCATTTTGATTCCAAATCCAAGGGAAGATCTCGGAGGTAA

Protein sequence

MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKASTGGAIVLVEKAEAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFRESAGSASGLRKKKLKSHHFDSKSKGRSRR

Homology

[Close]

BLAST of CmaCh14G020610 vs. Swiss-Prot
Match: RK5_ARATH (50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-89
Identity = 175/268 (65.30%), Postives = 214/268 (79.85%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKASTGGAIVLVEKAEA 60
           MAS SLL S+ SSFHG    ++A    P++    S      V+V AS     VLVEK+EA
Sbjct: 1   MASPSLLQSSASSFHGRFSPLAA----PSSARMLSPPLRNVVKVSAS---GTVLVEKSEA 60

Query: 61  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELA 120
           EK  RLK+ YLE+I+P L +EF Y NIHQVPK++KIVVNCGIGDA QN KGLEAAM ++A
Sbjct: 61  EKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIA 120

Query: 121 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            ITGQ+P+KTRA+ +IATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++
Sbjct: 121 LITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVS 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
            +SFDG+GNYSIG+++Q VFPEI+FD + + RGMDVCI+TTA++DQE Q+LLALMGMPFR
Sbjct: 181 PSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFR 240

Query: 241 ESAGSASG--LRKKKLKSHHFDSKSKGR 267
           E  G ++G  +RKKKLKSHHFD+K KG+
Sbjct: 241 EGGGGSTGAIVRKKKLKSHHFDAKGKGK 261

[Close]

BLAST of CmaCh14G020610 vs. Swiss-Prot
Match: RK5_SPIOL (50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea GN=RPL5 PE=1 SV=2)

HSP 1 Score: 323.6 bits (828), Expect = 2.1e-87
Identity = 161/217 (74.19%), Postives = 191/217 (88.02%), Query Frame = 1


Query: 50  GAIVLVEKAEAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNA 109
           G  V V+KAEAE +NRLK+NY+EK+VP+L +EFSYSNI +VPK+ KIVVNCGIGDA QNA
Sbjct: 3   GTAVFVDKAEAETINRLKTNYIEKMVPLLKEEFSYSNILEVPKVVKIVVNCGIGDASQNA 62

Query: 110 KGLEAAMSELASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLG 169
           KGL+AA++ELA ITGQRPVKT+AK +IA FK+REG  LGIA TLRGN+MYSFLDRLINL 
Sbjct: 63  KGLDAAINELALITGQRPVKTKAKTSIAGFKVREGMTLGIAVTLRGNLMYSFLDRLINLA 122

Query: 170 LPRTRDFQGLNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQ 229
           LPRTRDFQG+N NSFDGHGNYS+G REQSVFPEIK + + + RGMDVCITTTA+TD+EA 
Sbjct: 123 LPRTRDFQGVNPNSFDGHGNYSVGFREQSVFPEIKPEIVGKARGMDVCITTTAKTDKEAY 182

Query: 230 RLLALMGMPFRESAGSASGLRKKKLKSHHFDSKSKGR 267
           +LL+LMGMPFRE +G ++ +RKKKLKSHHFD+K KGR
Sbjct: 183 KLLSLMGMPFREGSGPSTLVRKKKLKSHHFDAK-KGR 218

[Close]

BLAST of CmaCh14G020610 vs. Swiss-Prot
Match: RK5_ORYSJ (50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL5 PE=2 SV=2)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 150/266 (56.39%), Postives = 188/266 (70.68%), Query Frame = 1


Query: 23  AHFPAPTALGYPSNVASL--------AVRVKASTGG--------------AIVLVEKAEA 82
           A FP  T      NV  L        A+RV AS                  IVLV+  EA
Sbjct: 13  APFPVTTTASSSRNVRLLLRSPPPRRALRVAASAAADAPPKPAPPPTSPSGIVLVDPTEA 72

Query: 83  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELA 142
           +KV+RLK+ Y +K+VP++ +EF Y+N+HQVPK+EKIVVNCG+G    N+KGLE+AM +LA
Sbjct: 73  QKVHRLKAVYDQKVVPLITEEFGYTNVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLA 132

Query: 143 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 202
            ITGQ PVKT+AKK++A+FKIREG  +GIA TLRG VM++FLDRLINLGLPRT DF G+N
Sbjct: 133 MITGQWPVKTKAKKSVASFKIREGNTIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVN 192

Query: 203 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 262
            NSFDGHGN++IG+R+Q VFPEI ++   +  GMDVCI TTA+TD EA RLL L+GMPF 
Sbjct: 193 PNSFDGHGNFTIGLRDQGVFPEIPYEVGGKKNGMDVCIVTTAKTDNEALRLLTLLGMPFA 252

Query: 263 ESAGSASGLRKKKLKSHHFDSKSKGR 267
           E   S+  +RKK+LK HHF SK +GR
Sbjct: 253 EHIKSSVVIRKKRLKRHHFMSKGRGR 278

[Close]

BLAST of CmaCh14G020610 vs. Swiss-Prot
Match: RL5_THEEB (50S ribosomal protein L5 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplE PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.0e-61
Identity = 112/178 (62.92%), Postives = 141/178 (79.21%), Query Frame = 1


Query: 65  RLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITG 124
           RLK +Y + +VP LM +F Y NIHQVPKI K+ VN G+G+A QNAK LEA ++E+A+ITG
Sbjct: 4   RLKDHYNKTVVPQLMQQFQYKNIHQVPKIVKVTVNRGLGEAAQNAKALEATLAEIATITG 63

Query: 125 QRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSF 184
           Q+PV TRAKKAIA FKIR+G P+G+A TLR   MY+FLDRLINL LPR RDF+G+N  SF
Sbjct: 64  QKPVVTRAKKAIAGFKIRKGMPVGVAVTLRSERMYAFLDRLINLALPRIRDFRGVNPKSF 123

Query: 185 DGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFRES 243
           DG GNY++G+REQ +FPE+ +D + + RGMDV I TTA TD+E + LL  MGMPFRE+
Sbjct: 124 DGRGNYTLGLREQLIFPEVNYDDIDQIRGMDVSIITTANTDEEGRALLKAMGMPFREN 181

[Close]

BLAST of CmaCh14G020610 vs. Swiss-Prot
Match: RL5_SYNY3 (50S ribosomal protein L5 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rplE PE=3 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 4.4e-61
Identity = 112/176 (63.64%), Postives = 142/176 (80.68%), Query Frame = 1


Query: 65  RLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITG 124
           RLK+ Y E I+P L +EF Y NIHQVPK+ K+ VN G+G+A QNAK LE++++ELA+ITG
Sbjct: 4   RLKTLYQETILPKLQEEFGYKNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITG 63

Query: 125 QRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSF 184
           Q+PV TRA+KAIA FKIREG P+G+  TLR   MY+FLDRLINL LPR RDF+G++ NSF
Sbjct: 64  QKPVVTRARKAIAGFKIREGMPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSF 123

Query: 185 DGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 241
           DG GNYS+GIREQ +FPEI +DT+ + RGMDV I T+A+TD+E + LL  +GMPFR
Sbjct: 124 DGRGNYSLGIREQLIFPEIDYDTIDQIRGMDVSIITSAQTDEEGRALLKALGMPFR 179

[Close]

BLAST of CmaCh14G020610 vs. TrEMBL
Match: A0A0A0L3D6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121660 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.0e-105
Identity = 215/271 (79.34%), Postives = 226/271 (83.39%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKA--STGGAIVLVEKA 60
           MASSSLLSS+ SSFHGHS   S  F AP   G PSNVA L +RVKA  STGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGCGNPSNVAQLGMRVKALASTGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEKV                           PKIEKIVVNCGIGDAQQNAKGLEAA++E
Sbjct: 61  EAEKV---------------------------PKIEKIVVNCGIGDAQQNAKGLEAAINE 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRES G+A+ +RKKKLKSHHFDSKSKGR+RR
Sbjct: 241 FRESGGAAAVMRKKKLKSHHFDSKSKGRARR 244

[Close]

BLAST of CmaCh14G020610 vs. TrEMBL
Match: V4TD26_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021696mg PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 201/271 (74.17%), Postives = 232/271 (85.61%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGH-SQLVSAHFPAPTALGYPSNV-ASLAVRVKASTGGAIVLVEKA 60
           MA  SLL S+ SSFHG    L S+ +  PT   YP+ +  +  V VKA+ GG IVLVEK+
Sbjct: 1   MACPSLLHSSASSFHGRFPALSSSSYVRPT---YPNPINVNGVVSVKAAAGG-IVLVEKS 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEK  RLK+ YLEKIVP+L +EFSY+NIHQVPKIEKIVVNCGIGDA QNAKGLEAAM++
Sbjct: 61  EAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMND 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LA ITGQRPVKTRA+ +IATFKIREG+PLGIA TLRGN+MYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           +N NSFDGHGNYSIG++EQSVFPEI++D L +P+GMDVCITTTA+TD+E QRLLALMGMP
Sbjct: 181 VNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPKGMDVCITTTAKTDKEGQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRE  G A+ +RKKKLK+HHFDSKSKG+SRR
Sbjct: 241 FREGGGPANLIRKKKLKAHHFDSKSKGKSRR 267

[Close]

BLAST of CmaCh14G020610 vs. TrEMBL
Match: A0A067H379_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024440mg PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 3.1e-101
Identity = 200/271 (73.80%), Postives = 232/271 (85.61%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGH-SQLVSAHFPAPTALGYPSNV-ASLAVRVKASTGGAIVLVEKA 60
           MA  SLL S+ SSFHG    L S+ +  PT   YP+ +  +  V VKA+ GG IVLVEK+
Sbjct: 1   MACPSLLHSSASSFHGRFPALSSSSYVRPT---YPNPINVNGVVSVKAAAGG-IVLVEKS 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEK  RLK+ YLEKIVP+L +EFSY+NIHQVPKIEKIVVNCGIGDA QNAKGLEAAM++
Sbjct: 61  EAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMND 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LA ITGQRPVKTRA+ +IATFKIREG+PLGIA TLRGN+MYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           +N NSFDGHGNYSIG++EQSVFPEI++D L +P+G+DVCITTTA+TD+E QRLLALMGMP
Sbjct: 181 VNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRE  G A+ +RKKKLK+HHFDSKSKG+SRR
Sbjct: 241 FREGGGPANLIRKKKLKAHHFDSKSKGKSRR 267

[Close]

BLAST of CmaCh14G020610 vs. TrEMBL
Match: D7UCH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01780 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98
Identity = 192/269 (71.38%), Postives = 220/269 (81.78%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKASTGGAIVLVEKAEA 60
           MAS +LL S  SSFHG   L S+ F      G P N    +V+  +     IVLVEK+EA
Sbjct: 1   MASPALLQSNASSFHGQFPLASSPFSVRLPYGNPRNGCGFSVKALSE----IVLVEKSEA 60

Query: 61  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELA 120
            K NRLK+ YLEKIVP+L +EFSY N+H+VPKIEKIV+NCGIGDA QNAKGLEAAM+ELA
Sbjct: 61  VKTNRLKTTYLEKIVPLLKEEFSYQNMHEVPKIEKIVLNCGIGDASQNAKGLEAAMNELA 120

Query: 121 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            I GQRPVKTRA+ +IATFK+REGQP+GIA TLRGN+MYSFLDRLINLGLPRTRDFQG+N
Sbjct: 121 LIAGQRPVKTRARASIATFKLREGQPVGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
            NSFDGHGNYSIG+++QSVFPEI+FD L R RGMDVCITTTA+TD+E Q+LLALMGMPFR
Sbjct: 181 PNSFDGHGNYSIGMKDQSVFPEIRFDILGRARGMDVCITTTAKTDKEGQQLLALMGMPFR 240

Query: 241 ESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           E  GS    RKKKLK+HHFDSKSKGR+RR
Sbjct: 241 EGGGSTVVQRKKKLKAHHFDSKSKGRARR 265

[Close]

BLAST of CmaCh14G020610 vs. TrEMBL
Match: M5XEU4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010127mg PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.2e-98
Identity = 197/266 (74.06%), Postives = 224/266 (84.21%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKASTGGAIVLVEKAEA 60
           MA  SLL SA SSFHG   +V +  P   + G P N   L + VKAS   A+VLVEK+EA
Sbjct: 1   MACPSLLRSATSSFHGQFPVVVSPPPLRLSYGNPRNGGGLVMPVKAS---AVVLVEKSEA 60

Query: 61  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELA 120
           EKV+RLK+ YLEKIVP L +EFSY+NIHQVPKIEK+VVNCGIGDAQQNAKGLEAAM++LA
Sbjct: 61  EKVSRLKTTYLEKIVPQLKEEFSYTNIHQVPKIEKVVVNCGIGDAQQNAKGLEAAMNDLA 120

Query: 121 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            ITGQRP+KTRAK ++ATFKIREGQPLGIA TLRGNVMYSFLDRLINLGLPRTRDFQGLN
Sbjct: 121 LITGQRPIKTRAKVSLATFKIREGQPLGIAVTLRGNVMYSFLDRLINLGLPRTRDFQGLN 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
            NSFDG+GNY++GI+EQSVFPEI+FD L + RGMDVCI TTA+TD+EAQ LLALMGMPFR
Sbjct: 181 PNSFDGNGNYAVGIKEQSVFPEIRFD-LGKGRGMDVCIRTTAKTDKEAQTLLALMGMPFR 240

Query: 241 ESAGSASGLRKKKLKSHHFDSKSKGR 267
           E+ G  S +RKKKLKSHHF SK +GR
Sbjct: 241 ET-GPVSAVRKKKLKSHHFSSKGRGR 261

[Close]

BLAST of CmaCh14G020610 vs. TAIR10
Match: AT4G01310.1 (AT4G01310.1 Ribosomal L5P family protein)

HSP 1 Score: 330.5 bits (846), Expect = 9.7e-91
Identity = 175/268 (65.30%), Postives = 214/268 (79.85%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKASTGGAIVLVEKAEA 60
           MAS SLL S+ SSFHG    ++A    P++    S      V+V AS     VLVEK+EA
Sbjct: 1   MASPSLLQSSASSFHGRFSPLAA----PSSARMLSPPLRNVVKVSAS---GTVLVEKSEA 60

Query: 61  EKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELA 120
           EK  RLK+ YLE+I+P L +EF Y NIHQVPK++KIVVNCGIGDA QN KGLEAAM ++A
Sbjct: 61  EKTQRLKTAYLERIIPALKEEFKYVNIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIA 120

Query: 121 SITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLN 180
            ITGQ+P+KTRA+ +IATFKIRE QPLGIA TLRG+VMYSFLDRLINL LPRTRDFQG++
Sbjct: 121 LITGQKPIKTRARASIATFKIREDQPLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVS 180

Query: 181 SNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMPFR 240
            +SFDG+GNYSIG+++Q VFPEI+FD + + RGMDVCI+TTA++DQE Q+LLALMGMPFR
Sbjct: 181 PSSFDGNGNYSIGVKDQGVFPEIRFDAVGKTRGMDVCISTTAKSDQEGQKLLALMGMPFR 240

Query: 241 ESAGSASG--LRKKKLKSHHFDSKSKGR 267
           E  G ++G  +RKKKLKSHHFD+K KG+
Sbjct: 241 EGGGGSTGAIVRKKKLKSHHFDAKGKGK 261

[Close]

BLAST of CmaCh14G020610 vs. TAIR10
Match: AT2G42740.1 (AT2G42740.1 ribosomal protein large subunit 16A)

HSP 1 Score: 48.5 bits (114), Expect = 7.4e-06
Identity = 38/138 (27.54%), Postives = 69/138 (50.00%), Query Frame = 1


Query: 78  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITGQRPVKTRAKKAIA 137
           +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+  + 
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVR 60

Query: 138 TFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQ 197
           +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G +  GI+E 
Sbjct: 61  SFGIRRNEKIACYVTVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH 120

Query: 198 SVFPEIKFDTLSRPRGMD 216
            +   IK+D  +   GMD
Sbjct: 121 -IDLGIKYDPSTGIYGMD 128

[Close]

BLAST of CmaCh14G020610 vs. TAIR10
Match: AT3G58700.1 (AT3G58700.1 Ribosomal L5P family protein)

HSP 1 Score: 48.5 bits (114), Expect = 7.4e-06
Identity = 38/138 (27.54%), Postives = 69/138 (50.00%), Query Frame = 1


Query: 78  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITGQRPVKTRAKKAIA 137
           +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+  + 
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVR 60

Query: 138 TFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQ 197
           +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G +  GI+E 
Sbjct: 61  SFGIRRNEKIACYVTVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH 120

Query: 198 SVFPEIKFDTLSRPRGMD 216
            +   IK+D  +   GMD
Sbjct: 121 -IDLGIKYDPSTGIYGMD 128

[Close]

BLAST of CmaCh14G020610 vs. TAIR10
Match: AT4G18730.1 (AT4G18730.1 ribosomal protein L16B)

HSP 1 Score: 48.5 bits (114), Expect = 7.4e-06
Identity = 38/138 (27.54%), Postives = 69/138 (50.00%), Query Frame = 1


Query: 78  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITGQRPVKTRAKKAIA 137
           +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+  + 
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVR 60

Query: 138 TFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQ 197
           +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G +  GI+E 
Sbjct: 61  SFGIRRNEKIACYVTVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH 120

Query: 198 SVFPEIKFDTLSRPRGMD 216
            +   IK+D  +   GMD
Sbjct: 121 -IDLGIKYDPSTGIYGMD 128

[Close]

BLAST of CmaCh14G020610 vs. TAIR10
Match: AT5G45775.2 (AT5G45775.2 Ribosomal L5P family protein)

HSP 1 Score: 48.5 bits (114), Expect = 7.4e-06
Identity = 38/138 (27.54%), Postives = 69/138 (50.00%), Query Frame = 1


Query: 78  LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSELASITGQRPVKTRAKKAIA 137
           +  E   SN  +  K++K+V+N  +G++      L  A   L  ++GQ PV ++A+  + 
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDR---LTRASKVLEQLSGQTPVFSKARYTVR 60

Query: 138 TFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSNSFDGHGNYSIGIREQ 197
           +F IR  + +    T+RG        +L+  GL + ++++ L  N F   G +  GI+E 
Sbjct: 61  SFGIRRNEKIACYVTVRGEKAM----QLLESGL-KVKEYELLRRN-FSDTGCFGFGIQEH 120

Query: 198 SVFPEIKFDTLSRPRGMD 216
            +   IK+D  +   GMD
Sbjct: 121 -IDLGIKYDPSTGIYGMD 128

[Close]

BLAST of CmaCh14G020610 vs. NCBI nr
Match: gi|659075174|ref|XP_008438004.1| (PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo])

HSP 1 Score: 459.5 bits (1181), Expect = 3.9e-126
Identity = 242/271 (89.30%), Postives = 254/271 (93.73%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKA--STGGAIVLVEKA 60
           MASSSLLSS+ SSFHGHS   S  F AP   G PSNVA LAVRVKA  S GGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGFGNPSNVAQLAVRVKALASAGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEKVNRLKSNY+EKIVP+LMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGL+AAM+E
Sbjct: 61  EAEKVNRLKSNYIEKIVPLLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLDAAMNE 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRESAG+A+ +RKKKLKSHHFDSKSKGR+RR
Sbjct: 241 FRESAGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of CmaCh14G020610 vs. NCBI nr
Match: gi|449432122|ref|XP_004133849.1| (PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 5.7e-125
Identity = 240/271 (88.56%), Postives = 252/271 (92.99%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKA--STGGAIVLVEKA 60
           MASSSLLSS+ SSFHGHS   S  F AP   G PSNVA L +RVKA  STGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGCGNPSNVAQLGMRVKALASTGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEKVNRLKSNYLEKIVP+LMDEFSY NIHQVPKIEKIVVNCGIGDAQQNAKGLEAA++E
Sbjct: 61  EAEKVNRLKSNYLEKIVPLLMDEFSYDNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAINE 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRES G+A+ +RKKKLKSHHFDSKSKGR+RR
Sbjct: 241 FRESGGAAAVMRKKKLKSHHFDSKSKGRARR 271

[Close]

BLAST of CmaCh14G020610 vs. NCBI nr
Match: gi|700201357|gb|KGN56490.1| (hypothetical protein Csa_3G121660 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.9e-105
Identity = 215/271 (79.34%), Postives = 226/271 (83.39%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGHSQLVSAHFPAPTALGYPSNVASLAVRVKA--STGGAIVLVEKA 60
           MASSSLLSS+ SSFHGHS   S  F AP   G PSNVA L +RVKA  STGGAIVLVEKA
Sbjct: 1   MASSSLLSSSTSSFHGHSPFFSVRFAAPVGCGNPSNVAQLGMRVKALASTGGAIVLVEKA 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEKV                           PKIEKIVVNCGIGDAQQNAKGLEAA++E
Sbjct: 61  EAEKV---------------------------PKIEKIVVNCGIGDAQQNAKGLEAAINE 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LASITGQRPVKTRAKK+IATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LASITGQRPVKTRAKKSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           LNS+SFDGHGNYSIGIREQSVFPEIKFDTL +PRGMDVCITTTAETDQEAQRLLALMGMP
Sbjct: 181 LNSSSFDGHGNYSIGIREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRES G+A+ +RKKKLKSHHFDSKSKGR+RR
Sbjct: 241 FRESGGAAAVMRKKKLKSHHFDSKSKGRARR 244

[Close]

BLAST of CmaCh14G020610 vs. NCBI nr
Match: gi|567904950|ref|XP_006444963.1| (hypothetical protein CICLE_v10021696mg [Citrus clementina])

HSP 1 Score: 377.9 bits (969), Expect = 1.5e-101
Identity = 201/271 (74.17%), Postives = 232/271 (85.61%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGH-SQLVSAHFPAPTALGYPSNV-ASLAVRVKASTGGAIVLVEKA 60
           MA  SLL S+ SSFHG    L S+ +  PT   YP+ +  +  V VKA+ GG IVLVEK+
Sbjct: 1   MACPSLLHSSASSFHGRFPALSSSSYVRPT---YPNPINVNGVVSVKAAAGG-IVLVEKS 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEK  RLK+ YLEKIVP+L +EFSY+NIHQVPKIEKIVVNCGIGDA QNAKGLEAAM++
Sbjct: 61  EAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMND 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LA ITGQRPVKTRA+ +IATFKIREG+PLGIA TLRGN+MYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           +N NSFDGHGNYSIG++EQSVFPEI++D L +P+GMDVCITTTA+TD+E QRLLALMGMP
Sbjct: 181 VNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPKGMDVCITTTAKTDKEGQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRE  G A+ +RKKKLK+HHFDSKSKG+SRR
Sbjct: 241 FREGGGPANLIRKKKLKAHHFDSKSKGKSRR 267

[Close]

BLAST of CmaCh14G020610 vs. NCBI nr
Match: gi|641867610|gb|KDO86294.1| (hypothetical protein CISIN_1g024440mg [Citrus sinensis])

HSP 1 Score: 376.3 bits (965), Expect = 4.4e-101
Identity = 200/271 (73.80%), Postives = 232/271 (85.61%), Query Frame = 1


Query: 1   MASSSLLSSAMSSFHGH-SQLVSAHFPAPTALGYPSNV-ASLAVRVKASTGGAIVLVEKA 60
           MA  SLL S+ SSFHG    L S+ +  PT   YP+ +  +  V VKA+ GG IVLVEK+
Sbjct: 1   MACPSLLHSSASSFHGRFPALSSSSYVRPT---YPNPINVNGVVSVKAAAGG-IVLVEKS 60

Query: 61  EAEKVNRLKSNYLEKIVPMLMDEFSYSNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAMSE 120
           EAEK  RLK+ YLEKIVP+L +EFSY+NIHQVPKIEKIVVNCGIGDA QNAKGLEAAM++
Sbjct: 61  EAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMND 120

Query: 121 LASITGQRPVKTRAKKAIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQG 180
           LA ITGQRPVKTRA+ +IATFKIREG+PLGIA TLRGN+MYSFLDRLINLGLPRTRDFQG
Sbjct: 121 LALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQG 180

Query: 181 LNSNSFDGHGNYSIGIREQSVFPEIKFDTLSRPRGMDVCITTTAETDQEAQRLLALMGMP 240
           +N NSFDGHGNYSIG++EQSVFPEI++D L +P+G+DVCITTTA+TD+E QRLLALMGMP
Sbjct: 181 VNPNSFDGHGNYSIGVKEQSVFPEIRYDALGKPKGIDVCITTTAKTDKEGQRLLALMGMP 240

Query: 241 FRESAGSASGLRKKKLKSHHFDSKSKGRSRR 270
           FRE  G A+ +RKKKLK+HHFDSKSKG+SRR
Sbjct: 241 FREGGGPANLIRKKKLKAHHFDSKSKGKSRR 267

The following BLAST results are available for this feature:

BLAST of CmaCh14G020610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RK5_ARATH	1.7e-89	65.30	50S ribosomal protein L5, chloroplastic OS=Arabidopsis thaliana GN=RPL5 PE=2 SV=...	[more]
RK5_SPIOL	2.1e-87	74.19	50S ribosomal protein L5, chloroplastic OS=Spinacia oleracea GN=RPL5 PE=1 SV=2	[more]
RK5_ORYSJ	3.2e-75	56.39	50S ribosomal protein L5, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL5 ...	[more]
RL5_THEEB	2.0e-61	62.92	50S ribosomal protein L5 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplE ...	[more]
RL5_SYNY3	4.4e-61	63.64	50S ribosomal protein L5 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=rplE...	[more]

BLAST of CmaCh14G020610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3D6_CUCSA	2.0e-105	79.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121660 PE=3 SV=1	[more]
V4TD26_9ROSI	1.1e-101	74.17	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021696mg PE=3 SV=1	[more]
A0A067H379_CITSI	3.1e-101	73.80	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024440mg PE=3 SV=1	[more]
D7UCH7_VITVI	3.2e-98	71.38	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g01780 PE=3 SV=...	[more]
M5XEU4_PRUPE	3.2e-98	74.06	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010127mg PE=3 SV=1	[more]

BLAST of CmaCh14G020610 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01310.1	9.7e-91	65.30	Ribosomal L5P family protein	[more]
AT2G42740.1	7.4e-06	27.54	ribosomal protein large subunit 16A	[more]
AT3G58700.1	7.4e-06	27.54	Ribosomal L5P family protein	[more]
AT4G18730.1	7.4e-06	27.54	ribosomal protein L16B	[more]
AT5G45775.2	7.4e-06	27.54	Ribosomal L5P family protein	[more]

BLAST of CmaCh14G020610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075174\|ref\|XP_008438004.1\|	3.9e-126	89.30	PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis melo]	[more]
gi\|449432122\|ref\|XP_004133849.1\|	5.7e-125	88.56	PREDICTED: 50S ribosomal protein L5, chloroplastic [Cucumis sativus]	[more]
gi\|700201357\|gb\|KGN56490.1\|	2.9e-105	79.34	hypothetical protein Csa_3G121660 [Cucumis sativus]	[more]
gi\|567904950\|ref\|XP_006444963.1\|	1.5e-101	74.17	hypothetical protein CICLE_v10021696mg [Citrus clementina]	[more]
gi\|641867610\|gb\|KDO86294.1\|	4.4e-101	73.80	hypothetical protein CISIN_1g024440mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020929	Ribosomal_L5_CS
IPR020930	Ribosomal_L5_bac-type
IPR022803	Ribosomal_L5_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0009735	response to cytokinin
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0000027	ribosomal large subunit assembly
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0016020	membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G020610.1	CmaCh14G020610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020929	Ribosomal protein L5, conserved site	PROSITE	PS00358	RIBOSOMAL_L5	coord: 119..135 scor
IPR020930	Ribosomal protein L5, bacterial-type	HAMAP	MF_01333_B	Ribosomal_L5_B	coord: 63..241 score: 41
IPR022803	Ribosomal protein L5 domain	GENE3D	G3DSA:3.30.1440.10		coord: 64..240 score: 1.3
IPR022803	Ribosomal protein L5 domain	unknown	SSF55282	RL5-like	coord: 65..240 score: 2.83
None	No IPR available	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 52..265 score: 3.9
None	No IPR available	PANTHER	PTHR11994:SF4	54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL	coord: 52..265 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G020610	Cucsa.258640	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G020610	Cla021214	Watermelon (97103) v1	cmawmB242
CmaCh14G020610	Csa3G121660	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G020610	MELO3C006088	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G020610	ClCG05G001320	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G020610	CSPI03G08570	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G020610	Cp4.1LG03g16460	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G020610	MELO3C006088.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G020610	CsaV3_3G008690	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G020610	Cla97C05G081650	Watermelon (97103) v2	cmawmbB263
CmaCh14G020610	Bhi01G000231	Wax gourd	cmawgoB0325
CmaCh14G020610	CsGy3G008660	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G020610	Carg20984	Silver-seed gourd	carcmaB0683

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G020610	Cucumber (Gy14) v2	cgybcmaB597
CmaCh14G020610	Melon (DHL92) v3.6.1	cmamedB235
CmaCh14G020610	Silver-seed gourd	carcmaB0534
CmaCh14G020610	Silver-seed gourd	carcmaB1364
CmaCh14G020610	Cucumber (Chinese Long) v3	cmacucB0305
CmaCh14G020610	Watermelon (97103) v2	cmawmbB247
CmaCh14G020610	Cucurbita maxima (Rimu)	cmacmaB242
CmaCh14G020610	Cucurbita maxima (Rimu)	cmacmaB243
CmaCh14G020610	Cucurbita maxima (Rimu)	cmacmaB253
CmaCh14G020610	Cucurbita maxima (Rimu)	cmacmaB280
CmaCh14G020610	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh14G020610	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G020610	Cucurbita moschata (Rifu)	cmacmoB255
CmaCh14G020610	Cucurbita moschata (Rifu)	cmacmoB260
CmaCh14G020610	Cucurbita moschata (Rifu)	cmacmoB269
CmaCh14G020610	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G020610	Wild cucumber (PI 183967)	cmacpiB253
CmaCh14G020610	Cucumber (Chinese Long) v2	cmacuB250
CmaCh14G020610	Cucurbita pepo (Zucchini)	cmacpeB253
CmaCh14G020610	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G020610	Cucurbita pepo (Zucchini)	cmacpeB298
CmaCh14G020610	Bottle gourd (USVL1VR-Ls)	cmalsiB226
CmaCh14G020610	Bottle gourd (USVL1VR-Ls)	cmalsiB245