CmaCh14G019720 (gene) Cucurbita maxima (Rimu)

NameCmaCh14G019720
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUDP-glucuronate 4-epimerase 1
LocationCma_Chr14 : 13870426 .. 13876407 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCATCTCGATAACATTCCTTCAACTCCGGTAAAGTTTAAGATGGAGAAATCAGCGTGCATTCATCGCGTCCGGTGGCAGTCATCGATAACGAAGCTCGCATTCTGGTCCTTAATTATACTTGGTTCGATCTTGATTTTCTTCTACAGATCGCCGTCGTCGTCGCCGCTGTCCTCCGATCCTTCCCGCCGATCGCTAAGCACTTAAGACTGGGGCGGACCGTCCTGGGAGAAAAGAGTTCGCTCATCGGCTCGAGTTAGGTCTCGTAATGGGATCTCTGTTCTCGTGACCGGCACCGCCGGATTCGTAGGAACTCATGTCTCGGTGGCGCTGAAGCGCCGAGGCGACGGCGTCCTTGGCCTCGACAATTTCAACAACTACTACGATCAATCGTTAAAACGAGACCGTCAAGCGCTTTTGGAGCGCACCGGCGTGTTCGTCGTTGAAGGCGATATCAACGATTCGGCTCTGTTGAAGAAGCTTTTTGAAGTGGTTCCATTCACCCATGTGATGCATTTGGCAGCTCAGGCCGGTGTCTCAGGTACGCCATGGAAAATCCTAGTTCTTACGTTCATAGCAACATAGCTGGGTTAGTTAGTCTTTTGGAGGTCTGTAAATCTGCAAATCCACAGCCTGCAATTGTTTGGGCATCTTCTAGCTCTGTTTATGGATTGAATACTAAGGTACCCTTTTCGGAACAAGACCGGACCGATGAACCGGCGAGTCTTTACGCGGCGACGAAGAAGGGTGGAGAAGAAATTGCACACAGTTACAATCATATCTATGGACTTTCATTGACAGGGCTGAGATTCTTCACTGTTTATGGACCATGGGAAGGCCTGATATGGCTTACTTCTTCTTCACAAGAGATATCTTGAAAGGAAAGTCAATTCCCATATTTGAAGCAGCTGATCATGGCACTGTGGCTAGAGATTTCACGTACATTGATGACATTGTGAAGGGTTGTTTGGCATCTTTGGACACTGCTGAGAAGAGCACAGGGAGTGGAGGGAAGAAGAAGGGACCGGCGCAGCTTCGGGTTTTCAATTTAGGGAATACGTCGCCGGAGCATTTTGGAGAAGCTTTTGAAGGTGAAAGCAAAGAGGAACATAATGAAGTTGCCAAGGAATGGTGATGTTCAGTTTACTCATGCCAATATTAGCTTGGCTCAAAGGGAACTTGGATATAAACCAACCACAGATCTCCCGACCAGGCTGAAGAAGTTCGTCCGGTGGTATATGAATTATTATTCGCAAGGGAAGAAGGCCGATGCGTAGCGGGATTGCTCGGCGTTTACACGGTTGGCTACTTCCATTCTTATGCTTGGTTGTCTTCCATTCTTATTCACGTCGGTTGGAGAGGGGAACAAAGCATTCCTTGTAAGAGTGTAGAAACTTCTCCTCAACAAACACGTTTTGAGACTGTGAGACTGATGACAATATGTAACGGGTTAAAACAGACAATATTTGTTAATGGTGGGCTTGGCCTGTTACAAATGGTATCAGAGCCAGACACCAGGCGGTGTACAAGTGAGGACGTTGGGTTCTCCAAAGGGGGTGGGTTGTGAGATCCTACGTCGGTTGGAGAGAGGAACAAAGCATTGCTTATAAGAGTGTGGAAACCTCTTCTTAGCAGACACGTTTTAAAATTGTGAGGTTGACGACGACACGTAACAGACTAAAGCGGACAATATCTGTTGATTGTAAGTTTGACTTGTTATAAATACGGTTTTGGTGTCACGTTTTCAATGAATATTTAACATAACTTTAGCTGCTATGCAAAGCTAACATTGTCAAACCTTGTTTCTGGTTGTGTTCTTGAGCTACCCCTTAGGCACTGCACATGATTTCTTTTGGAAGGTAGCGGTTTTTATACGTCTTTGGGTCGATTTTTCGTGCAGAAGAGTTCAAATTTAGAACATAGCGATCGAATAGCTATTATCCGCTCAGCTGCATTTTGACTAAGGAGTATGCGGCAAGAGTAGGTGAGTGGTAAGCGGAAGCTGCTCGGGCAGCATTTCACATCGCTATATGTTTGATATAATTTCGAGTACAATGAGCCAAATCTTTGAAATGAGATTTTGAGGATATAGGTCACTAACTCGAGCATAGTTTAATGATTCAAACATTAACAGTATCATTTTCAATAAGAAAAGAGTTTTCGCTTACAAATGTCGGTATTTAGTTGAATAGCTAGTTTGTATACATTGTATGGAAGCAAATCTGAGATAATTTAATTGACTGAAATTAAGTATAGAGGGTTTTATCCATGGATGAATTCATCTTCAATTAATCATAATCATTAATTTTATGATCCATATGTCGTCTAGAGATACTTACAGGTAGGGGAAAGCCTTTCCCGTCTCTTGCCACCTATTTCATTCCTAATTCTCACAAAAATTTTTATTTATTTATGTAGGGATAATTTTTCTCCCGATCTTATTTTAGAGTTTTTACATTTTAATATAATCTTATTAAAAAATTGTAAAAAAAAAAAAATCAAATAATTTGATATATTTTATAAGAAAATATGTATATAATATTCTACAACCTAATTTCTAAAGTGTAATATTAAAATTTTTAAATTTATAGACCTAATATAAAAATGTATCTATCCCTCATAATTTTTTTAACTAATAAAATTTTAAATTTTTATAAATTAATTAATTTAAACTCTCCTTTAGATTTTCATTTAAAATTATTAATTTATTTTGAAAATAAAAATTTATTTAATATGATAAAAAAAAATGGTAGAAGCAAATAGACTGTAGTTTCCTTATTTATTTTTCTCTATTTATATTTTTAAAAATATTATGTGATAGTTTTTCAAAAAAAATAATTATAATTTATTAATTGAGTAGTAAATATAATTCTCCCTTTTTATAACTGTAAAATAAATAAATATATATATATATATATATATATATATAAATAAATAAAAAAAGAATATGATAAAATTCAATTTTAACTGTGAAATAAAGTTTGGGTGTACAATCTTTGTGAGAGGATTGAACATGACAGGTTCCTAAAAACAGCCCAAAAGGAATCTGTCCCACCCACTATCCTCTTAAGTGATGGATTCACATGTTGGTAATAAGGGGTAATTTCGTCCTAAAATATTATGTTCACATGAAGCACTGTTCATTTTTTTCTTTTTTCTTTTTTCTTTTTTTTTTTTTCTGGAGGGAAAAAATAGGAAGGTTCACATGAGCTATAAGAATGAATAATGGGTCCATACTCATAAAAATAGATGCAATTAAAATTTACAACACACTGGAGATTTGATTTGCCACCTACTCAATCACTCAAAATATATTTTGGTGGGTACCCCTCTTTTAAAAAATAATCTTAATAGTGGATTATAATTAAAATGTTATCATATCATATCATCATTAAAATAAATCATCATAATCGATTTGACAACTTTCAACGCGAGTATTAGAAAAATCGTACGTATAATCTTTCTCTTAATTAGTCAATGTGGGACTTCAAATCCTCAAAACGTATCTCAGAGAATTTTAACCCTAATGGATCTTAAAATATTATTTTAATATTTTTTTTAGTTCAATAATACATGAGAGTGAAGATTCGAACTTCTGACCTTTAATTCAAAAAATATGTTTAAATTTGATTAACCATTAATAAATTTAATTTTTGGAGTGATCTCAAATGGAATATTTAATGCAATTTTTTTTTTTTAATTGAAAAAGCTAAATTAATTTTGTTCCAAATATTAGTACATTATTTAAAACATGTTCCTCAAAATTAGAAGAAAAAAAAAGAGAGAATATTAAAAAGATATTAATGACAAAAAAAAAAGGGTAGGCAAAAGGACAGAAGAAAAGTAGGCACACAAGGTCAATGAATGGGCTCTCCTTGTTGGGAATCACTAACCATACCCATACCCAATAAATAAATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTAATAACTCAAACCTACTGCAACGGATATTGTCTTGTTTAAATTTTCTCTTTTAGGTTTCCCTCAAAACTTTAAAAACATGTTTGTTAGGAAGAGGTTTCATACTTTTATAAATAATGTTTTGTTTTTTTCTACGACGTATATGAGATCTCACAATTCAAATTTCACGTTAATTGAAGAGAAAATGAGTGTGAGCGAGTAAGGATACTGACCCTGAAGGGGAGGATTGTAAAATCTCACGTTAGTTTGAGGAAACAAAACATTTTTTCATAAATGTATGAAAACCTCTCCATAACAAACTCGTTTTAAAAATCTTGAGTAAAATTCAAATAGGACAATATCGACTCTTTTAACATGTCAACTTCAAAAATTAAATAAAATTAGAATATTTTTTTAATTTAACATGTGAATATGCACGAATCTGAGACGAATAAAGATATCATATGCCCAAATTATTTTTTAAAGTTATATAATATGGTGAGGTAGATGATTTAATAATGTTTGAGGTATAGTTAGGTTAATAATAAAATTATAATATATACTTTGTAATTTCACTAGAGACTATATAATATAACGTGCATAATGCATATAAATATTGTACCAAGGATGAAGCGCCCTGTTTCACAGCTTTTACTGAGACTGAACTCTTGCATATGAATCAGTACAAGAGACAGAGAGAAAGAGAGAGAAGAAGGAATCTCAAGGCTATGGGACTGTGAGGCGTTTTGTGGCCGTAGGTTTGTCAGTGATCTCTCTCGTATTCATTCACAAGATAACGCTCTTCATTTCCATTTCCATTTTGCTCCCACTTTTCTCGCTCAATCTCTCTCTGCTCCGTTTCTCTGACTCTCCCGCCACGATCAGTCCTCCATTTCCAACGCCATTGAAGACCTTTCACTGTTATCTTCCGAATCACAGACGACTAAATTGA

mRNA sequence

ATGTCCCATCTCGATAACATTCCTTCAACTCCGGTAAAGTTTAAGATGGAGAAATCAGCGTGCATTCATCGCATCGCCGTCGTCGTCGCCGCTGTCCTCCGATCCTTCCCGCCGATCGCTAAGCACTTAAGACTGGGGCGGACCGTCCTGGGAGAAAAGAGAACTCATGTCTCGGTGGCGCTGAAGCGCCGAGGCGACGGCGTCCTTGGCCTCGACAATTTCAACAACTACTACGATCAATCGTTAAAACGAGACCGTCAAGCGCTTTTGGAGCGCACCGGCGTGTTCGTCGTTGAAGGCGATATCAACGATTCGGCTCTGTTGAAGAAGCTTTTTGAAGTGGTTCCATTCACCCATGTGATGCATTTGGCAGCTCAGGCCGGTGTCTCAGGTACGCCATGGAAAATCCTAGTTCTTACGGCTGAGATTCTTCACTGTTTATGGACCATGGGAAGGCCTGATATGGCTTACTTCTTCTTCACAAGAGATATCTTGAAAGGAAAGTCAATTCCCATATTTGAAGCAGCTGATCATGGCACTGTGGCTAGAGATTTCACGTACATTGATGACATTGTGAAGGGTTGTTTGGCATCTTTGGACACTGCTGAGAAGAGCACAGGGAGTGGAGGGAAGAAGAAGGGACCGGCGCAGCTTCGGGTTTTCAATTTAGGGAATACGTCGCCGGAGCATTTTGGAGAAGCTTTTGAAGTACAAGAGACAGAGAGAAAGAGAGAGAAGAAGGAATCTCAAGGCTATGGGACTGTGAGGCGTTTTGTGGCCGTAGGTTTGTCAGTGATCTCTCTCGTATTCATTCACAAGATAACGCTCTTCATTTCCATTTCCATTTTGCTCCCACTTTTCTCGCTCAATCTCTCTCTGCTCCGTTTCTCTGACTCTCCCGCCACGATCAGTCCTCCATTTCCAACGCCATTGAAGACCTTTCACTGTTATCTTCCGAATCACAGACGACTAAATTGA

Coding sequence (CDS)

ATGTCCCATCTCGATAACATTCCTTCAACTCCGGTAAAGTTTAAGATGGAGAAATCAGCGTGCATTCATCGCATCGCCGTCGTCGTCGCCGCTGTCCTCCGATCCTTCCCGCCGATCGCTAAGCACTTAAGACTGGGGCGGACCGTCCTGGGAGAAAAGAGAACTCATGTCTCGGTGGCGCTGAAGCGCCGAGGCGACGGCGTCCTTGGCCTCGACAATTTCAACAACTACTACGATCAATCGTTAAAACGAGACCGTCAAGCGCTTTTGGAGCGCACCGGCGTGTTCGTCGTTGAAGGCGATATCAACGATTCGGCTCTGTTGAAGAAGCTTTTTGAAGTGGTTCCATTCACCCATGTGATGCATTTGGCAGCTCAGGCCGGTGTCTCAGGTACGCCATGGAAAATCCTAGTTCTTACGGCTGAGATTCTTCACTGTTTATGGACCATGGGAAGGCCTGATATGGCTTACTTCTTCTTCACAAGAGATATCTTGAAAGGAAAGTCAATTCCCATATTTGAAGCAGCTGATCATGGCACTGTGGCTAGAGATTTCACGTACATTGATGACATTGTGAAGGGTTGTTTGGCATCTTTGGACACTGCTGAGAAGAGCACAGGGAGTGGAGGGAAGAAGAAGGGACCGGCGCAGCTTCGGGTTTTCAATTTAGGGAATACGTCGCCGGAGCATTTTGGAGAAGCTTTTGAAGTACAAGAGACAGAGAGAAAGAGAGAGAAGAAGGAATCTCAAGGCTATGGGACTGTGAGGCGTTTTGTGGCCGTAGGTTTGTCAGTGATCTCTCTCGTATTCATTCACAAGATAACGCTCTTCATTTCCATTTCCATTTTGCTCCCACTTTTCTCGCTCAATCTCTCTCTGCTCCGTTTCTCTGACTCTCCCGCCACGATCAGTCCTCCATTTCCAACGCCATTGAAGACCTTTCACTGTTATCTTCCGAATCACAGACGACTAAATTGA

Protein sequence

MSHLDNIPSTPVKFKMEKSACIHRIAVVVAAVLRSFPPIAKHLRLGRTVLGEKRTHVSVALKRRGDGVLGLDNFNNYYDQSLKRDRQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGVSGTPWKILVLTAEILHCLWTMGRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGGKKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKESQGYGTVRRFVAVGLSVISLVFIHKITLFISISILLPLFSLNLSLLRFSDSPATISPPFPTPLKTFHCYLPNHRRLN
BLAST of CmaCh14G019720 vs. Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 9.2e-37
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DILKGKSI IFE+A+HGTVARDFTYIDDIVKGCLA+LDTAEKSTGSGG
Sbjct: 283 GRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGG 342

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KK+GPAQLRVFNLGNTSP    +   + E + K + K++
Sbjct: 343 KKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKN 381

BLAST of CmaCh14G019720 vs. Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-34
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGK+I IFE A+HGTVARDFTYIDDIVKGCL +LDTAEKSTGSGG
Sbjct: 278 GRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGG 337

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KK+G AQLRVFNLGNTSP    +   + E   K + K +
Sbjct: 338 KKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRN 376

BLAST of CmaCh14G019720 vs. Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-34
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGK+I IFE  +HGTVARDFTYIDDIVKGCL +LDTAEKSTGSGG
Sbjct: 277 GRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGG 336

Query: 211 KKKGPAQLRVFNLGNTSP 229
           KK+G AQLRVFNLGNTSP
Sbjct: 337 KKRGAAQLRVFNLGNTSP 354

BLAST of CmaCh14G019720 vs. Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.1e-32
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DILKGK+I +FE+ D G+VARDFTYIDDIVKGCL +LDTAEKSTGSGG
Sbjct: 282 GRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGG 341

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKE 249
           KKKGPA  R++NLGNTSP    +   + E   K + K+
Sbjct: 342 KKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKK 379

BLAST of CmaCh14G019720 vs. Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-30
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DIL GKSI I+   D+  VARDFTYIDDIVKGC+ +LDTAEKSTGSGG
Sbjct: 298 GRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGG 357

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQE 240
           KK+G AQLRV+NLGNTSP   G    + E
Sbjct: 358 KKRGQAQLRVYNLGNTSPVPVGRLVSILE 386

BLAST of CmaCh14G019720 vs. TrEMBL
Match: A0A0A0L7M6_CUCSA (UDP-glucuronate 4-epimerase 3 OS=Cucumis sativus GN=Csa_3G126220 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.4e-38
Identity = 102/180 (56.67%), Postives = 109/180 (60.56%), Query Frame = 1

Query: 1   MSHLDNIPSTPVKFKMEKSACIHRI-------------AVVVAAVLRSF----------- 60
           MSHLDNIPSTP KFKM+KS  IHR+              V++ ++L  F           
Sbjct: 1   MSHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 60

Query: 61  --------------PPIAKHLRLGRTV-------------LGEKRTHVSVALKRRGDGVL 120
                         P   K +R    V              G   THVSVALKRRGDGVL
Sbjct: 61  DHSRRSLSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGDGVL 120

Query: 121 GLDNFNNYYDQSLKRDRQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV 130
           GLDNFNNYYDQSLKR RQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV
Sbjct: 121 GLDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV 180

BLAST of CmaCh14G019720 vs. TrEMBL
Match: A0A166FFB6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008554 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-36
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DILKGKSIPIFEAA+HGTVARDFTYIDDIVKGCLA+LDTAEKSTGSGG
Sbjct: 247 GRPDMAYFFFTKDILKGKSIPIFEAANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGG 306

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KKKGPAQLRVFNLGNTSP    +   + E   K + K S
Sbjct: 307 KKKGPAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRS 345

BLAST of CmaCh14G019720 vs. TrEMBL
Match: A0A067JY29_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14538 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-36
Identity = 79/99 (79.80%), Postives = 84/99 (84.85%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGKSIPIFEAA HGTVARDFTYIDDIVKGCLA+LDTAEKSTGSGG
Sbjct: 281 GRPDMAYFFFTRDILKGKSIPIFEAASHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGG 340

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KKKGPAQLRVFNLGNTSP    +   + E   K + K +
Sbjct: 341 KKKGPAQLRVFNLGNTSPVPVTDLVSILERLLKAKAKRN 379

BLAST of CmaCh14G019720 vs. TrEMBL
Match: M5XCI5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005953mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.1e-36
Identity = 79/99 (79.80%), Postives = 85/99 (85.86%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGK+IPIFEAA+HGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG
Sbjct: 282 GRPDMAYFFFTRDILKGKTIPIFEAANHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 341

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KKKGPAQLRVFNLGNTSP    +   + E   K + K +
Sbjct: 342 KKKGPAQLRVFNLGNTSPVPVSDLVTILERLLKVKAKRN 380

BLAST of CmaCh14G019720 vs. TrEMBL
Match: A0A0D2SGV4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G090500 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.3e-36
Identity = 76/89 (85.39%), Postives = 81/89 (91.01%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGKSIPIFEAA+HGTVARDFTYIDDIVKGCLA+LDTAEKSTGSGG
Sbjct: 284 GRPDMAYFFFTRDILKGKSIPIFEAANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGG 343

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQE 240
           KKKGPAQLRV+NLGNTSP    +   + E
Sbjct: 344 KKKGPAQLRVYNLGNTSPVPVSDLVSILE 372

BLAST of CmaCh14G019720 vs. TAIR10
Match: AT2G45310.1 (AT2G45310.1 UDP-D-glucuronate 4-epimerase 4)

HSP 1 Score: 155.6 bits (392), Expect = 5.2e-38
Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DILKGKSI IFE+A+HGTVARDFTYIDDIVKGCLA+LDTAEKSTGSGG
Sbjct: 283 GRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGG 342

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KK+GPAQLRVFNLGNTSP    +   + E + K + K++
Sbjct: 343 KKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKN 381

BLAST of CmaCh14G019720 vs. TAIR10
Match: AT1G02000.1 (AT1G02000.1 UDP-D-glucuronate 4-epimerase 2)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGK+I IFE A+HGTVARDFTYIDDIVKGCL +LDTAEKSTGSGG
Sbjct: 278 GRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGG 337

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KK+G AQLRVFNLGNTSP    +   + E   K + K +
Sbjct: 338 KKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRN 376

BLAST of CmaCh14G019720 vs. TAIR10
Match: AT4G00110.1 (AT4G00110.1 UDP-D-glucuronate 4-epimerase 3)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-35
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGK+I IFE  +HGTVARDFTYIDDIVKGCL +LDTAEKSTGSGG
Sbjct: 277 GRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGG 336

Query: 211 KKKGPAQLRVFNLGNTSP 229
           KK+G AQLRVFNLGNTSP
Sbjct: 337 KKRGAAQLRVFNLGNTSP 354

BLAST of CmaCh14G019720 vs. TAIR10
Match: AT4G12250.1 (AT4G12250.1 UDP-D-glucuronate 4-epimerase 5)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-33
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DILKGK+I +FE+ D G+VARDFTYIDDIVKGCL +LDTAEKSTGSGG
Sbjct: 282 GRPDMAYFFFTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGG 341

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKE 249
           KKKGPA  R++NLGNTSP    +   + E   K + K+
Sbjct: 342 KKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKK 379

BLAST of CmaCh14G019720 vs. TAIR10
Match: AT3G23820.1 (AT3G23820.1 UDP-D-glucuronate 4-epimerase 6)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFT+DIL GKSI I+   D+  VARDFTYIDDIVKGC+ +LDTAEKSTGSGG
Sbjct: 298 GRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGG 357

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQE 240
           KK+G AQLRV+NLGNTSP   G    + E
Sbjct: 358 KKRGQAQLRVYNLGNTSPVPVGRLVSILE 386

BLAST of CmaCh14G019720 vs. NCBI nr
Match: gi|296081442|emb|CBI18845.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 191.4 bits (485), Expect = 2.4e-45
Identity = 115/208 (55.29%), Postives = 132/208 (63.46%), Query Frame = 1

Query: 46  GRTVL-----GEKRTHVSVALKRRGDGVLGLDNFNNYYDQSLKRDRQALLERTGVFVVEG 105
           G TVL     G   +HVS ALKRRGDGV+GLDNFNNYYD  LKR R+ LLER GVFVVEG
Sbjct: 12  GHTVLVTGGAGFVGSHVSAALKRRGDGVIGLDNFNNYYDPELKRHRRDLLERAGVFVVEG 71

Query: 106 DINDSALLKKLFEVVPFTHVMHLAAQAGV-SGTPWKILVLTAEILHCLWTMGRPDMAYFF 165
           DINDS LL+KLF+VV FTHVMHLAAQA   S  P   + +   ++H +         Y  
Sbjct: 72  DINDSELLRKLFDVVAFTHVMHLAAQAVCKSADPQPAIQVKPLLIHII--------IYTV 131

Query: 166 FTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGGKKKGPAQLR 225
           F              A D    + DFTYIDDIVKGCLASLDTA+KSTG+GGKKKG AQ R
Sbjct: 132 FQ-----------LLACD---FSPDFTYIDDIVKGCLASLDTAKKSTGTGGKKKGAAQFR 191

Query: 226 VFNLGNTSPEHFGEAFEVQETERKREKK 248
           +FNLGNTSP    +   + E   K + K
Sbjct: 192 IFNLGNTSPVDVSKLVSILEKLLKVKAK 197

BLAST of CmaCh14G019720 vs. NCBI nr
Match: gi|778677452|ref|XP_011650790.1| (PREDICTED: UDP-glucuronate 4-epimerase 3 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 102/180 (56.67%), Postives = 109/180 (60.56%), Query Frame = 1

Query: 1   MSHLDNIPSTPVKFKMEKSACIHRI-------------AVVVAAVLRSF----------- 60
           MSHLDNIPSTP KFKM+KS  IHR+              V++ ++L  F           
Sbjct: 1   MSHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 60

Query: 61  --------------PPIAKHLRLGRTV-------------LGEKRTHVSVALKRRGDGVL 120
                         P   K +R    V              G   THVSVALKRRGDGVL
Sbjct: 61  DHSRRSLSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGDGVL 120

Query: 121 GLDNFNNYYDQSLKRDRQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV 130
           GLDNFNNYYDQSLKR RQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV
Sbjct: 121 GLDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV 180

BLAST of CmaCh14G019720 vs. NCBI nr
Match: gi|659075492|ref|XP_008438174.1| (PREDICTED: UDP-glucuronate 4-epimerase 3 [Cucumis melo])

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 102/180 (56.67%), Postives = 109/180 (60.56%), Query Frame = 1

Query: 1   MSHLDNIPSTPVKFKMEKSACIHRI-------------AVVVAAVLRSF----------- 60
           MSHLDNIPSTP KFKM+KS  IHR+              V++ ++L  F           
Sbjct: 1   MSHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 60

Query: 61  --------------PPIAKHLRLGRTV-------------LGEKRTHVSVALKRRGDGVL 120
                         P   K +R    V              G   THVSVALKRRGDGVL
Sbjct: 61  DHSRRSLSTYDWGGPSWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGDGVL 120

Query: 121 GLDNFNNYYDQSLKRDRQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV 130
           GLDNFNNYYDQSLKR RQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV
Sbjct: 121 GLDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGV 180

BLAST of CmaCh14G019720 vs. NCBI nr
Match: gi|697121810|ref|XP_009614886.1| (PREDICTED: UDP-glucuronate 4-epimerase 3-like [Nicotiana tomentosiformis])

HSP 1 Score: 161.0 bits (406), Expect = 3.5e-36
Identity = 80/99 (80.81%), Postives = 85/99 (85.86%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGKSIPIFEAA+HGTVARDFTYIDDIVKGCLA+LDTAEKSTGSGG
Sbjct: 283 GRPDMAYFFFTRDILKGKSIPIFEAANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGG 342

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KKKGPAQLRVFNLGNTSP    +   + E   K + K S
Sbjct: 343 KKKGPAQLRVFNLGNTSPVPVSDLVSILERLLKVKAKRS 381

BLAST of CmaCh14G019720 vs. NCBI nr
Match: gi|470142476|ref|XP_004306933.1| (PREDICTED: UDP-glucuronate 4-epimerase 3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 160.6 bits (405), Expect = 4.6e-36
Identity = 80/99 (80.81%), Postives = 85/99 (85.86%), Query Frame = 1

Query: 151 GRPDMAYFFFTRDILKGKSIPIFEAADHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 210
           GRPDMAYFFFTRDILKGK+IPIFEAA+HGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG
Sbjct: 281 GRPDMAYFFFTRDILKGKTIPIFEAANHGTVARDFTYIDDIVKGCLASLDTAEKSTGSGG 340

Query: 211 KKKGPAQLRVFNLGNTSPEHFGEAFEVQETERKREKKES 250
           KKKGPAQLRVFNLGNTSP    +   + E   K + K S
Sbjct: 341 KKKGPAQLRVFNLGNTSPVPVSDLVTILERLLKVKAKRS 379

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GAE4_ARATH9.2e-3775.76UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1[more]
GAE2_ARATH2.5e-3473.74UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1[more]
GAE3_ARATH2.5e-3488.46UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1[more]
GAE5_ARATH3.1e-3268.37UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1[more]
GAE6_ARATH2.2e-3071.91UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L7M6_CUCSA3.4e-3856.67UDP-glucuronate 4-epimerase 3 OS=Cucumis sativus GN=Csa_3G126220 PE=4 SV=1[more]
A0A166FFB6_DAUCA5.4e-3679.80Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008554 PE=4 SV=1[more]
A0A067JY29_JATCU7.1e-3679.80Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14538 PE=4 SV=1[more]
M5XCI5_PRUPE7.1e-3679.80Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005953mg PE=4 SV=1[more]
A0A0D2SGV4_GOSRA9.3e-3685.39Uncharacterized protein OS=Gossypium raimondii GN=B456_007G090500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G45310.15.2e-3875.76 UDP-D-glucuronate 4-epimerase 4[more]
AT1G02000.11.4e-3573.74 UDP-D-glucuronate 4-epimerase 2[more]
AT4G00110.11.4e-3588.46 UDP-D-glucuronate 4-epimerase 3[more]
AT4G12250.11.7e-3368.37 UDP-D-glucuronate 4-epimerase 5[more]
AT3G23820.11.2e-3171.91 UDP-D-glucuronate 4-epimerase 6[more]
Match NameE-valueIdentityDescription
gi|296081442|emb|CBI18845.3|2.4e-4555.29unnamed protein product [Vitis vinifera][more]
gi|778677452|ref|XP_011650790.1|4.9e-3856.67PREDICTED: UDP-glucuronate 4-epimerase 3 [Cucumis sativus][more]
gi|659075492|ref|XP_008438174.1|4.9e-3856.67PREDICTED: UDP-glucuronate 4-epimerase 3 [Cucumis melo][more]
gi|697121810|ref|XP_009614886.1|3.5e-3680.81PREDICTED: UDP-glucuronate 4-epimerase 3-like [Nicotiana tomentosiformis][more]
gi|470142476|ref|XP_004306933.1|4.6e-3680.81PREDICTED: UDP-glucuronate 4-epimerase 3 [Fragaria vesca subsp. vesca][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050662coenzyme binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G019720.1CmaCh14G019720.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratase, N-terminal domainPFAMPF01370Epimerasecoord: 56..130
score: 1.
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 56..130
score: 2.5
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 56..238
score: 7.1
NoneNo IPR availableGENE3DG3DSA:3.90.25.10coord: 155..232
score: 1.
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 55..228
score: 4.2
NoneNo IPR availablePANTHERPTHR10366:SF319UDP-GLUCURONATE 4-EPIMERASE 2-RELATEDcoord: 55..228
score: 4.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh14G019720CmaCh16G010460Cucurbita maxima (Rimu)cmacmaB244