CmaCh14G019340 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATGCCTCTACATTCGTCACAGTGCCAAAGCCCTTTATCAACGCGGCTAATTCACCTCCGTATCTGCACGGCGACGAGTAATCGGTACGCTGATAAGTAAATCCGTTGATAGACTGTCGCATTTTCTTTTCTCGATCAATTTCTGTCGCGCTATCCGTCTTCTGAATTTCTGGATGTTTTTTCTTCTTGATTTTTGGATAGGAGGACTGCGAAGAAGCGCTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCGAAGGTAGTCCTCCCCTGCGATTTGAGTTTTTTTTTTTTTTCTTTCTTTTGTGTTATTGAACTCATGAACTTGATTTTTAATGCTTATTATTGACATTTTATGATGCTTTTGGATTTAAGGTGTTTCCTCAAGCTGATAGAGTATACTCGTCCGTCTTGAGCAGCGCCCTGAGGTAATCTCACGCTCAACAAAAATTGCGAATGAATTTGTAAAATTTGTAGAATTTGTTTGATGTATTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTAAGTCGTTTGGTTTGGTGGAGTCATCATATTGGCTTGAATATTCTCTCAATTATTTATGGTCCAGCTTTGCTTTTCAATTATTGGGTATCATACCACAAATGTGCTGCAATCAAGAATGCGGATGGATGTTGCTTTTTAACCATATCTTTGATTGTTAAAAGTGGAAAAAAAAAAAAAAAAAAACTTGTTCTCAGAAATCTGATCATAGGTTTAGTATGGATTATAAATTTGTTTGAATTGAGTTTGTCTATGCACCATTCCTCTTAGAATTGGATGTCGAAAAGGTCTTGGCTCAAAAAATCTGGTCATAGGGTTGGTTGGTTTACATTATAAGTCTTACATCAATCACCGTATGGGACTGTTACTAGAGATGCTTTTGTAGGAAATATGAATGGTTTGGCGATGCATCCTTGGAAGTCTTAGCTTCTAAGTTGTATCTTGCGTGTTAGCTGACCCTCTTATTCATGTCATAAAGTCTATTCATGTTCATCTTTCTGCTTTCCCTACACATTATTTTTCCTTCTGCTTCTCTCCATTTCGGATTTCGAAATGAAAGCAATGAGCTATACTCGGGGACCAAGATGCAGCCGTAGTAGCCTCTTAGTCGTACTTTAGTTAGTTCAAACTCTTACAAACTAAAGTTAGAACTTTCTTATATTTGTTGTTAATATGGCAAACAAATGCGAATGAACTATATTTGAATGAGTGTAATTATTATTTTATCTATTGAGCTATATTCAATCAACGAACACTAACACATTATTTTTTTAAGATTGATTTTGAATGTTGGTGGTGGTTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAGAGAAGCTTCCTCCAACACTACAATCAGATCAACATCAGATATTTTCACTCAGATTAGTTCTCTTCCCTGATTCTCATTTGCTTGTTGCTTCTGCAATATCTGATCTTTGTTTTTGTCTTTATTGCTTTGTGTGATCCGTATAAAGATATCAGTTCTTCTCATTAGGAAGAATACCTTACCTTAAATTATATTTTAAAAATTACTCAACCTTCAAAACAAAACTGAAGAAAAACAAGAATAAATGATTTTTTTTAATACTTTTTCCCCCTAGAGAATGTAAAACCCTTTTCAAATAAATGATTTTT ATGGCGATGCCTCTACATTCGTCACAGTGCCAAAGCCCTTTATCAACGCGGCTAATTCACCTCCGTATCTGCACGGCGACGAGAGGACTGCGAAGAAGCGCTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCGAAGAGTATACTCGTCCGTCTTGAGCAGCGCCCTGAGAATTTGTTTGATGTATTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAGAGAAGCTTCCTCCAACACTACAATCAGATCAACATCAGATATTTTCACTCAGATTAGTTCTCTTCCCTGATTCTCATTTGCTTGTTGCTTCTGCAATATCTGATCTTTGTTTTTGTCTTTATTGCTTTGTGTGATCCGTATAAAGATATCAGTTCTTCTCATTAGGAAGAATACCTTACCTTAAATTATATTTTAAAAATTACTCAACCTTCAAAACAAAACTGAAGAAAAACAAGAATAAATGATTTTTTTTAATACTTTTTCCCCCTAGAGAATGTAAAACCCTTTTCAAATAAATGATTTTT ATGGCGATGCCTCTACATTCGTCACAGTGCCAAAGCCCTTTATCAACGCGGCTAATTCACCTCCGTATCTGCACGGCGACGAGAGGACTGCGAAGAAGCGCTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCGAAGAGTATACTCGTCCGTCTTGAGCAGCGCCCTGAGAATTTGTTTGATGTATTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTGGTTGAGTAG MAMPLHSSQCQSPLSTRLIHLRICTATRGLRRSAFKVRAVSKKREPAKSILVRLEQRPENLFDVLLSITFRVIISDINACQVDLGTDSKHCFCKAGDLLAVVE
BLAST of CmaCh14G019340 vs. TrEMBL
Match: A0A0A0L6L9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128890 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.3e-12 Identity = 52/111 (46.85%), Postives = 63/111 (56.76%), Query Frame = 1
BLAST of CmaCh14G019340 vs. TrEMBL
Match: A9P8A5_POPTR (Chaperonin 10 family protein OS=Populus trichocarpa GN=POPTR_0014s04380g PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-10 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 1
BLAST of CmaCh14G019340 vs. TrEMBL
Match: B9SKH0_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0658800 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 6.2e-10 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1
BLAST of CmaCh14G019340 vs. TrEMBL
Match: A0A103XUM2_CYNCS (Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_000672 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.2e-09 Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 1
BLAST of CmaCh14G019340 vs. TrEMBL
Match: W9QU16_9ROSA (10 kDa chaperonin OS=Morus notabilis GN=L484_008030 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.2e-09 Identity = 45/107 (42.06%), Postives = 59/107 (55.14%), Query Frame = 1
BLAST of CmaCh14G019340 vs. TAIR10
Match: AT2G44650.1 (AT2G44650.1 chloroplast chaperonin 10) HSP 1 Score: 60.1 bits (144), Expect = 9.4e-10 Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 1
BLAST of CmaCh14G019340 vs. TAIR10
Match: AT3G60210.1 (AT3G60210.1 GroES-like family protein) HSP 1 Score: 60.1 bits (144), Expect = 9.4e-10 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 1
BLAST of CmaCh14G019340 vs. NCBI nr
Match: gi|449432354|ref|XP_004133964.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Cucumis sativus]) HSP 1 Score: 79.7 bits (195), Expect = 3.3e-12 Identity = 52/111 (46.85%), Postives = 63/111 (56.76%), Query Frame = 1
BLAST of CmaCh14G019340 vs. NCBI nr
Match: gi|659075686|ref|XP_008438275.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Cucumis melo]) HSP 1 Score: 76.6 bits (187), Expect = 2.8e-11 Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 1
BLAST of CmaCh14G019340 vs. NCBI nr
Match: gi|743787748|ref|XP_011031730.1| (PREDICTED: 20 kDa chaperonin, chloroplastic-like [Populus euphratica]) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-10 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 1
BLAST of CmaCh14G019340 vs. NCBI nr
Match: gi|566202457|ref|XP_006375101.1| (chaperonin 10 family protein [Populus trichocarpa]) HSP 1 Score: 73.9 bits (180), Expect = 1.8e-10 Identity = 45/107 (42.06%), Postives = 60/107 (56.07%), Query Frame = 1
BLAST of CmaCh14G019340 vs. NCBI nr
Match: gi|255571099|ref|XP_002526500.1| (PREDICTED: 10 kDa chaperonin [Ricinus communis]) HSP 1 Score: 71.6 bits (174), Expect = 8.9e-10 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |