CmaCh14G017590 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh14G017590
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr14 : 12818115 .. 12818500 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTAAATCGTGTAGCTTCAATACAGATATGCAAAGCGAAGTAAAGACGGGAGAAACAGAGAAAAGTCGATTGCTATTCCAAATAGAGACAGTCGAAGACTCCCCAAACTTGCAGGAGATTAGCTTCACAAAGCCAATGGAGAAACGAATAGGGAAGTTGGGAAGAAGCGATTCAGAGAAACTGAGACCTTCTTTTCCAGGGCTCGCGAAAGAAAAAGAAGAATCGGGGATGGAATTAAAAGCCATGGATCAAAATAACTTAGCAGCAATGTCTCTAAGGTAGCGAAAGACTTACCACCGCCATTGCTGATTTGTAAAGGGAAGCGTAGAACCAAATCCCTAATTTTTGAGACCTGCATCTGCTGTGCTACTGCGATCAATTGA

mRNA sequence

ATGCGTAAATCGTGTAGCTTCAATACAGATATGCAAAGCGAAGTAAAGACGGGAGAAACAGAGAAAAGTCGATTGCTATTCCAAATAGAGACAGTCGAAGACTCCCCAAACTTGCAGGAGATTAGCTTCACAAAGCCAATGGAGAAACGAATAGGGAAGTTGGGAAGAAGCGATTCAGAGAAACTGAGACCTTCTTTTCCAGGGCTCGCGAAAGAAAAAGAAGAATCGGGGATGGAATTAAAAGCCATGGATCAAAATAACTTAGCAGCAATGTCTCTAAGAACCAAATCCCTAATTTTTGAGACCTGCATCTGCTGTGCTACTGCGATCAATTGA

Coding sequence (CDS)

ATGCGTAAATCGTGTAGCTTCAATACAGATATGCAAAGCGAAGTAAAGACGGGAGAAACAGAGAAAAGTCGATTGCTATTCCAAATAGAGACAGTCGAAGACTCCCCAAACTTGCAGGAGATTAGCTTCACAAAGCCAATGGAGAAACGAATAGGGAAGTTGGGAAGAAGCGATTCAGAGAAACTGAGACCTTCTTTTCCAGGGCTCGCGAAAGAAAAAGAAGAATCGGGGATGGAATTAAAAGCCATGGATCAAAATAACTTAGCAGCAATGTCTCTAAGAACCAAATCCCTAATTTTTGAGACCTGCATCTGCTGTGCTACTGCGATCAATTGA

Protein sequence

MRKSCSFNTDMQSEVKTGETEKSRLLFQIETVEDSPNLQEISFTKPMEKRIGKLGRSDSEKLRPSFPGLAKEKEESGMELKAMDQNNLAAMSLRTKSLIFETCICCATAIN
Homology
[Close]
BLAST of CmaCh14G017590 vs. TrEMBL
Match: A0A0A0L8I8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144220 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.3e-33
Identity = 83/127 (65.35%), Postives = 91/127 (71.65%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIETVEDSPNLQEISFTKPMEKRIGKLGRSDSE 60
           MRKS SFN D+Q E KTGETEK  LL+QI+T+ED PNLQEISF  PMEKR+ KLGRSDSE
Sbjct: 679 MRKSPSFNIDIQIEGKTGETEKIPLLYQIKTIEDLPNLQEISFPNPMEKRVVKLGRSDSE 738

Query: 61  KLRPSFPGLAKEKEESGMELKAMDQNNLAAM----------------SLRTKSLIFETCI 112
           K RPSFPG  KEKEES ME+KA+DQNN  +                   RTKSLIF TCI
Sbjct: 739 KSRPSFPGFVKEKEESRMEIKAIDQNNFVSEKKEAKNLPPPSPIRKGKRRTKSLIFGTCI 798

[Close]
BLAST of CmaCh14G017590 vs. TrEMBL
Match: W9RXU0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013346 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-06
Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIET-VEDSPNLQEISF--------------TK 60
           MRKS SF+ D+Q+E K  E++++ LL+Q +  ++ SP+  EIS                 
Sbjct: 569 MRKSPSFSLDLQNEAKNDESDRTPLLYQDKAEIQSSPSQDEISLGTPLTVNGYSTQDQAM 628

Query: 61  PMEKRIGKLGRSDSEKLRPSFPGLAKEKEESGMELKAMDQNNL-----------AAMSLR 112
           P+E+++  L RSDS+K +  F G  KE+EE+ + +    Q              A  S  
Sbjct: 629 PLEEKVVTLERSDSDKSKSPFLGFLKEEEEAHIVVTPQKQKETKDLWRSSSTKKATSSAS 688

[Close]
BLAST of CmaCh14G017590 vs. TrEMBL
Match: B9HKB9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s15900g PE=4 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 4.5e-06
Identity = 50/151 (33.11%), Postives = 73/151 (48.34%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQ----IETVED-------SPNL-----QEISFT 60
           MRKS SF+ D++ E ++ E++++ LL+Q    +E++ D       SP+L     QE    
Sbjct: 668 MRKSPSFDLDLRIEARSEESDQTPLLYQDKITVESLSDQSDVSLQSPHLLSQCSQETLRA 727

Query: 61  KPMEKRIGKLGRSDSEKLRPSFPGLAKEKEESGMELKAMDQNNLAAMSLRTKSL------ 112
            P+E+++  L RSDSEK R  F G  KE EE+   +    Q+N AA    TK L      
Sbjct: 728 LPVEEKVIALERSDSEKSRTPFLGFLKEDEEAHAVVTPKKQDNHAAAKKTTKDLWNSPTK 787

[Close]
BLAST of CmaCh14G017590 vs. NCBI nr
Match: gi|659076299|ref|XP_008438605.1| (PREDICTED: myb-like protein X isoform X2 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 8.0e-33
Identity = 85/127 (66.93%), Postives = 93/127 (73.23%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIETVEDSPNLQEISFTKPMEKRIGKLGRSDSE 60
           MRKS SFN D+Q E KTGETEK+ LL+QI+T+ED  NLQEISF  PMEKR+ KLGRSDSE
Sbjct: 655 MRKSPSFNIDIQIEGKTGETEKTPLLYQIKTIEDLSNLQEISFPNPMEKRVVKLGRSDSE 714

Query: 61  KLRPSFPGLAKEKEESGMELKAMDQNNL-----AAMSL-----------RTKSLIFETCI 112
           K RPSFPG  KEKEESGME KA+DQNN       A +L           RTKSLIF TCI
Sbjct: 715 KSRPSFPGFVKEKEESGMEFKAIDQNNFVNEKKVAKNLPPPSPIRKGKRRTKSLIFGTCI 774

[Close]
BLAST of CmaCh14G017590 vs. NCBI nr
Match: gi|659076301|ref|XP_008438606.1| (PREDICTED: dentin sialophosphoprotein-like isoform X3 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 8.0e-33
Identity = 85/127 (66.93%), Postives = 93/127 (73.23%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIETVEDSPNLQEISFTKPMEKRIGKLGRSDSE 60
           MRKS SFN D+Q E KTGETEK+ LL+QI+T+ED  NLQEISF  PMEKR+ KLGRSDSE
Sbjct: 573 MRKSPSFNIDIQIEGKTGETEKTPLLYQIKTIEDLSNLQEISFPNPMEKRVVKLGRSDSE 632

Query: 61  KLRPSFPGLAKEKEESGMELKAMDQNNL-----AAMSL-----------RTKSLIFETCI 112
           K RPSFPG  KEKEESGME KA+DQNN       A +L           RTKSLIF TCI
Sbjct: 633 KSRPSFPGFVKEKEESGMEFKAIDQNNFVNEKKVAKNLPPPSPIRKGKRRTKSLIFGTCI 692

[Close]
BLAST of CmaCh14G017590 vs. NCBI nr
Match: gi|659076297|ref|XP_008438604.1| (PREDICTED: myb-like protein X isoform X1 [Cucumis melo])

HSP 1 Score: 148.3 bits (373), Expect = 8.0e-33
Identity = 85/127 (66.93%), Postives = 93/127 (73.23%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIETVEDSPNLQEISFTKPMEKRIGKLGRSDSE 60
           MRKS SFN D+Q E KTGETEK+ LL+QI+T+ED  NLQEISF  PMEKR+ KLGRSDSE
Sbjct: 680 MRKSPSFNIDIQIEGKTGETEKTPLLYQIKTIEDLSNLQEISFPNPMEKRVVKLGRSDSE 739

Query: 61  KLRPSFPGLAKEKEESGMELKAMDQNNL-----AAMSL-----------RTKSLIFETCI 112
           K RPSFPG  KEKEESGME KA+DQNN       A +L           RTKSLIF TCI
Sbjct: 740 KSRPSFPGFVKEKEESGMEFKAIDQNNFVNEKKVAKNLPPPSPIRKGKRRTKSLIFGTCI 799

[Close]
BLAST of CmaCh14G017590 vs. NCBI nr
Match: gi|778678361|ref|XP_011650954.1| (PREDICTED: myb-like protein X [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32
Identity = 83/127 (65.35%), Postives = 91/127 (71.65%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIETVEDSPNLQEISFTKPMEKRIGKLGRSDSE 60
           MRKS SFN D+Q E KTGETEK  LL+QI+T+ED PNLQEISF  PMEKR+ KLGRSDSE
Sbjct: 679 MRKSPSFNIDIQIEGKTGETEKIPLLYQIKTIEDLPNLQEISFPNPMEKRVVKLGRSDSE 738

Query: 61  KLRPSFPGLAKEKEESGMELKAMDQNNLAAM----------------SLRTKSLIFETCI 112
           K RPSFPG  KEKEES ME+KA+DQNN  +                   RTKSLIF TCI
Sbjct: 739 KSRPSFPGFVKEKEESRMEIKAIDQNNFVSEKKEAKNLPPPSPIRKGKRRTKSLIFGTCI 798

[Close]
BLAST of CmaCh14G017590 vs. NCBI nr
Match: gi|703142343|ref|XP_010107730.1| (hypothetical protein L484_013346 [Morus notabilis])

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06
Identity = 47/145 (32.41%), Postives = 71/145 (48.97%), Query Frame = 1 

Query: 1   MRKSCSFNTDMQSEVKTGETEKSRLLFQIET-VEDSPNLQEISF--------------TK 60
           MRKS SF+ D+Q+E K  E++++ LL+Q +  ++ SP+  EIS                 
Sbjct: 569 MRKSPSFSLDLQNEAKNDESDRTPLLYQDKAEIQSSPSQDEISLGTPLTVNGYSTQDQAM 628

Query: 61  PMEKRIGKLGRSDSEKLRPSFPGLAKEKEESGMELKAMDQNNL-----------AAMSLR 112
           P+E+++  L RSDS+K +  F G  KE+EE+ + +    Q              A  S  
Sbjct: 629 PLEEKVVTLERSDSDKSKSPFLGFLKEEEEAHIVVTPQKQKETKDLWRSSSTKKATSSAS 688

The following BLAST results are available for this feature:
BLAST of CmaCh14G017590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh14G017590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8I8_CUCSA7.3e-3365.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144220 PE=4 SV=1[more]
W9RXU0_9ROSA1.2e-0632.41Uncharacterized protein OS=Morus notabilis GN=L484_013346 PE=4 SV=1[more]
B9HKB9_POPTR4.5e-0633.11Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s15900g PE=4 SV=2[more]
BLAST of CmaCh14G017590 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh14G017590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076299|ref|XP_008438605.1|8.0e-3366.93PREDICTED: myb-like protein X isoform X2 [Cucumis melo][more]
gi|659076301|ref|XP_008438606.1|8.0e-3366.93PREDICTED: dentin sialophosphoprotein-like isoform X3 [Cucumis melo][more]
gi|659076297|ref|XP_008438604.1|8.0e-3366.93PREDICTED: myb-like protein X isoform X1 [Cucumis melo][more]
gi|778678361|ref|XP_011650954.1|1.0e-3265.35PREDICTED: myb-like protein X [Cucumis sativus][more]
gi|703142343|ref|XP_010107730.1|1.7e-0632.41hypothetical protein L484_013346 [Morus notabilis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G017590.1CmaCh14G017590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh14G017590Wax gourdcmawgoB0310
CmaCh14G017590Wax gourdcmawgoB0328
CmaCh14G017590Wax gourdcmawgoB0344
CmaCh14G017590Cucurbita maxima (Rimu)cmacmaB249
CmaCh14G017590Cucurbita maxima (Rimu)cmacmaB260
CmaCh14G017590Cucurbita maxima (Rimu)cmacmaB267
CmaCh14G017590Cucurbita maxima (Rimu)cmacmaB284
CmaCh14G017590Cucurbita maxima (Rimu)cmacmaB296
CmaCh14G017590Cucumber (Gy14) v1cgycmaB0709
CmaCh14G017590Cucumber (Gy14) v1cgycmaB1073
CmaCh14G017590Cucurbita moschata (Rifu)cmacmoB245
CmaCh14G017590Cucurbita moschata (Rifu)cmacmoB251
CmaCh14G017590Cucurbita moschata (Rifu)cmacmoB271
CmaCh14G017590Cucurbita moschata (Rifu)cmacmoB279
CmaCh14G017590Wild cucumber (PI 183967)cmacpiB240
CmaCh14G017590Wild cucumber (PI 183967)cmacpiB255
CmaCh14G017590Cucumber (Chinese Long) v2cmacuB238
CmaCh14G017590Cucumber (Chinese Long) v2cmacuB253
CmaCh14G017590Melon (DHL92) v3.5.1cmameB235
CmaCh14G017590Melon (DHL92) v3.5.1cmameB242
CmaCh14G017590Watermelon (Charleston Gray)cmawcgB233
CmaCh14G017590Watermelon (Charleston Gray)cmawcgB235
CmaCh14G017590Watermelon (Charleston Gray)cmawcgB240
CmaCh14G017590Watermelon (97103) v1cmawmB242
CmaCh14G017590Watermelon (97103) v1cmawmB236
CmaCh14G017590Watermelon (97103) v1cmawmB250
CmaCh14G017590Cucurbita pepo (Zucchini)cmacpeB259
CmaCh14G017590Cucurbita pepo (Zucchini)cmacpeB266
CmaCh14G017590Cucurbita pepo (Zucchini)cmacpeB283
CmaCh14G017590Cucurbita pepo (Zucchini)cmacpeB290
CmaCh14G017590Cucurbita pepo (Zucchini)cmacpeB292
CmaCh14G017590Bottle gourd (USVL1VR-Ls)cmalsiB225
CmaCh14G017590Bottle gourd (USVL1VR-Ls)cmalsiB245
CmaCh14G017590Bottle gourd (USVL1VR-Ls)cmalsiB247
CmaCh14G017590Cucumber (Gy14) v2cgybcmaB188
CmaCh14G017590Cucumber (Gy14) v2cgybcmaB318
CmaCh14G017590Melon (DHL92) v3.6.1cmamedB267
CmaCh14G017590Melon (DHL92) v3.6.1cmamedB273
CmaCh14G017590Silver-seed gourdcarcmaB0313
CmaCh14G017590Silver-seed gourdcarcmaB0325
CmaCh14G017590Silver-seed gourdcarcmaB0453
CmaCh14G017590Silver-seed gourdcarcmaB1075
CmaCh14G017590Silver-seed gourdcarcmaB1320
CmaCh14G017590Cucumber (Chinese Long) v3cmacucB0277
CmaCh14G017590Cucumber (Chinese Long) v3cmacucB0278
CmaCh14G017590Cucumber (Chinese Long) v3cmacucB0291
CmaCh14G017590Watermelon (97103) v2cmawmbB263
CmaCh14G017590Watermelon (97103) v2cmawmbB266
CmaCh14G017590Watermelon (97103) v2cmawmbB273