CmaCh14G013200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G013200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Auxin-responsive protein
Location	Cma_Chr14 : 10368681 .. 10368923 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTGAGGGATTAGGCCTTGAAATCACCCAGCTCCGGCTAGGATTCCCTGGTGGAGGTCCGTTCCCGGCGAGTAAAAACAATGAGAACAAAAGGGTTTTCTCGGAGGTGGAAGTAGAAGATCATAAGAGTCACGGCCAGGGGCGGAGCAAGCAGGCAGTAGGGTGGCCGCCCGTGTGCTCATACCGGCGGAGGAACAGCTTGAATTTTATTGCTAATAATGATGATTTTGGGATCTAA

mRNA sequence

ATGGCAGCTGAGGGATTAGGCCTTGAAATCACCCAGCTCCGGCTAGGATTCCCTGGTGGAGGTCCGTTCCCGGCGAGTAAAAACAATGAGAACAAAAGGGTTTTCTCGGAGGTGGAAGTAGAAGATCATAAGAGTCACGGCCAGGGGCGGAGCAAGCAGGCAGTAGGGTGGCCGCCCGTGTGCTCATACCGGCGGAGGAACAGCTTGAATTTTATTGCTAATAATGATGATTTTGGGATCTAA

Coding sequence (CDS)

ATGGCAGCTGAGGGATTAGGCCTTGAAATCACCCAGCTCCGGCTAGGATTCCCTGGTGGAGGTCCGTTCCCGGCGAGTAAAAACAATGAGAACAAAAGGGTTTTCTCGGAGGTGGAAGTAGAAGATCATAAGAGTCACGGCCAGGGGCGGAGCAAGCAGGCAGTAGGGTGGCCGCCCGTGTGCTCATACCGGCGGAGGAACAGCTTGAATTTTATTGCTAATAATGATGATTTTGGGATCTAA

Protein sequence

MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQGRSKQAVGWPPVCSYRRRNSLNFIANNDDFGI

Homology

[Close]

BLAST of CmaCh14G013200 vs. Swiss-Prot
Match: AX22C_VIGRR (Auxin-induced protein 22C OS=Vigna radiata var. radiata GN=AUX22C PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.3e-13
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGP---FPASKNNENKRVFSEVEVEDHKSHGQGRSK---QA 60
          M  E LGLEIT+LRLG PG G        KN   KRVFS++E E+  S   G+ +   Q 
Sbjct: 1  MEKEDLGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEEDGKKETKNQV 60

Query: 61 VGWPPVCSYRRRNSLN 71
          VGWPPVCSYR++N++N
Sbjct: 61 VGWPPVCSYRKKNTVN 76

[Close]

BLAST of CmaCh14G013200 vs. Swiss-Prot
Match: AX22A_VIGRR (Auxin-induced protein 22A OS=Vigna radiata var. radiata GN=AUX22A PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.6e-13
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFP-ASKNNE--NKRVFSEVEV---EDHKSHGQGRSK-- 60
          MA EGLGLEIT+LRLG P       A+KN E  NKRVFSE++    E+  S G G  K  
Sbjct: 1  MAKEGLGLEITELRLGLPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKME 60

Query: 61 ---QAVGWPPVCSYRRRNSLN 71
             Q VGWPPVCSYR++NS+N
Sbjct: 61 NKNQVVGWPPVCSYRKKNSVN 81

[Close]

BLAST of CmaCh14G013200 vs. Swiss-Prot
Match: AUX22_SOYBN (Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-12
Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPA--SKNNENKRVFSEVEV---EDHKSHGQGRSK--- 60
          MA EGLGLEIT+LRLG P      +  +K NE KR FSE++    +++ S G G  K   
Sbjct: 1  MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 61 ---QAVGWPPVCSYRRRNSLN 71
             Q VGWPPVCSYR++NS+N
Sbjct: 61 NKSQVVGWPPVCSYRKKNSMN 81

[Close]

BLAST of CmaCh14G013200 vs. Swiss-Prot
Match: IAA6_PEA (Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-12
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVE--VEDHKSHGQGRS----KQA 60
          MA EGLGLEIT+LRLG   G P    K NE KR+FSE++  VE++   G  +S     Q 
Sbjct: 1  MAREGLGLEITELRLGLSCGEP----KKNEKKRMFSEIDGGVEENGGSGDRKSVDKKNQV 60

Query: 61 VGWPPVCSYRRRN 68
          VGWPPVCSYR++N
Sbjct: 61 VGWPPVCSYRKKN 69

[Close]

BLAST of CmaCh14G013200 vs. Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-09
Identity = 35/67 (52.24%), Postives = 41/67 (61.19%), Query Frame = 1


Query: 3  AEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQGRSKQAVGWPPVCS 62
          +  LGLEIT+LRLG PG         +  KR   EVE+ D K     +S Q VGWPPVCS
Sbjct: 5  SNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEI-DLKCEPAKKS-QVVGWPPVCS 64

Query: 63 YRRRNSL 70
          YRR+NSL
Sbjct: 65 YRRKNSL 69

[Close]

BLAST of CmaCh14G013200 vs. TrEMBL
Match: Q9SSY3_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=CsIAA1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-16
Identity = 49/73 (67.12%), Postives = 53/73 (72.60%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGG--GPFPASKNNENKRVFSEVEVEDH---KSHGQGRSKQAV 60
          +AA+GL LEIT+LRLG PG        SKNNE KRVFSEVEVED    K   +GR KQ V
Sbjct: 4  VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRKQVV 63

Query: 61 GWPPVCSYRRRNS 69
          GWPPVCSYRRRNS
Sbjct: 64 GWPPVCSYRRRNS 76

[Close]

BLAST of CmaCh14G013200 vs. TrEMBL
Match: A0A0D2TJ06_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_009G132300 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-13
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEV--EVEDHKSHG----QGRSKQA 60
          MA EGLGLEIT+LRLG PGGG    ++ NE KRVFSE+  E E+ KS+G    Q +S Q 
Sbjct: 1  MAKEGLGLEITELRLGLPGGG----TEKNEKKRVFSEISEEEENEKSNGPPELQSKS-QV 60

Query: 61 VGWPPVCSYRRRNS 69
          VGWPPVCSYR++NS
Sbjct: 61 VGWPPVCSYRKKNS 69

[Close]

BLAST of CmaCh14G013200 vs. TrEMBL
Match: I1KH60_SOYBN (Auxin-induced protein OS=Glycine max GN=GLYMA_07G034200 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-12
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQGRSK----QAVG 60
          MA EGLGLEIT+LRLG P          NE KR FS+++ E+  S G  + K    Q VG
Sbjct: 1  MAKEGLGLEITELRLGLPDAEHVTVVNKNEKKRAFSQIDDENSSSGGDRKIKTNKSQVVG 60

Query: 61 WPPVCSYRRRNSLN 71
          WPPVCSYR++NS+N
Sbjct: 61 WPPVCSYRKKNSMN 74

[Close]

BLAST of CmaCh14G013200 vs. TrEMBL
Match: C6TBC6_SOYBN (Auxin-induced protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-12
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQGRSK----QAVG 60
          MA EGLGLEIT+LRLG P          NE KR FS+++ E+  S G  + K    Q VG
Sbjct: 1  MAKEGLGLEITELRLGLPDAEHVTVVNKNEKKRAFSQIDDENSSSGGDRKIKTNKSQVVG 60

Query: 61 WPPVCSYRRRNSLN 71
          WPPVCSYR++NS+N
Sbjct: 61 WPPVCSYRKKNSMN 74

[Close]

BLAST of CmaCh14G013200 vs. TrEMBL
Match: A0A0B2NW48_GLYSO (Auxin-induced protein OS=Glycine soja GN=glysoja_009572 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-12
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQGRSK----QAVG 60
          MA EGLGLEIT+LRLG P          NE KR FS+++ E+  S G  + K    Q VG
Sbjct: 1  MAKEGLGLEITELRLGLPDAEHVTVVNKNEKKRAFSQIDDENSSSGGDRKIKTNKSQVVG 60

Query: 61 WPPVCSYRRRNSLN 71
          WPPVCSYR++NS+N
Sbjct: 61 WPPVCSYRKKNSMN 74

[Close]

BLAST of CmaCh14G013200 vs. TAIR10
Match: AT1G15580.1 (AT1G15580.1 indole-3-acetic acid inducible 5)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-10
Identity = 35/67 (52.24%), Postives = 41/67 (61.19%), Query Frame = 1


Query: 3  AEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQGRSKQAVGWPPVCS 62
          +  LGLEIT+LRLG PG         +  KR   EVE+ D K     +S Q VGWPPVCS
Sbjct: 5  SNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEI-DLKCEPAKKS-QVVGWPPVCS 64

Query: 63 YRRRNSL 70
          YRR+NSL
Sbjct: 65 YRRKNSL 69

[Close]

BLAST of CmaCh14G013200 vs. TAIR10
Match: AT3G15540.1 (AT3G15540.1 indole-3-acetic acid inducible 19)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-08
Identity = 33/88 (37.50%), Postives = 42/88 (47.73%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQ------------ 60
          M  EGLGLEIT+LRLG PG      ++    KR F+E+ +    S+              
Sbjct: 1  MEKEGLGLEITELRLGLPGRD---VAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGD 60

Query: 61 --------GRSKQAVGWPPVCSYRRRNS 69
                      Q VGWPPVCSYR++NS
Sbjct: 61 AEKVNDSPAAKSQVVGWPPVCSYRKKNS 85

[Close]

BLAST of CmaCh14G013200 vs. TAIR10
Match: AT1G52830.1 (AT1G52830.1 indole-3-acetic acid 6)

HSP 1 Score: 53.9 bits (128), Expect = 5.2e-08
Identity = 34/85 (40.00%), Postives = 41/85 (48.24%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPAS---KNNENKRVFSEVEVEDHKSHGQGRS------ 60
          MA EGL LEIT+LRLG PG      S    + + KRV S++            S      
Sbjct: 1  MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE 60

Query: 61 --------KQAVGWPPVCSYRRRNS 69
                   QAVGWPPVCSYRR+ +
Sbjct: 61 DESLPVVKSQAVGWPPVCSYRRKKN 85

[Close]

BLAST of CmaCh14G013200 vs. TAIR10
Match: AT1G04240.1 (AT1G04240.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 48.1 bits (113), Expect = 2.9e-06
Identity = 32/76 (42.11%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 4  EGLGLEITQLRLGFPGGGPFPASK------NNENKRVFS-----EVEVEDHKSH-GQGRS 63
          E + L+ T+LRLG PG      +K      NN NKRV S     E+E    K+     R 
Sbjct: 3  EFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRK 62

Query: 64 KQAVGWPPVCSYRRRN 68
           Q VGWPPV SYR+ N
Sbjct: 63 AQIVGWPPVRSYRKNN 78

[Close]

BLAST of CmaCh14G013200 vs. NCBI nr
Match: gi|659093332|ref|XP_008447487.1| (PREDICTED: auxin-induced protein AUX22-like [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-16
Identity = 49/73 (67.12%), Postives = 54/73 (73.97%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPG--GGPFPASKNNENKRVFSEVEVEDH---KSHGQGRSKQAV 60
          MAA+GL LEIT+LRLG PG  G     SKNNE KRVFSEVEVED    K   +GR KQ V
Sbjct: 4  MAAKGLDLEITELRLGLPGDCGSLISTSKNNEKKRVFSEVEVEDKSRAKGEDEGRRKQVV 63

Query: 61 GWPPVCSYRRRNS 69
          GWPPVCSYR+R+S
Sbjct: 64 GWPPVCSYRQRSS 76

[Close]

BLAST of CmaCh14G013200 vs. NCBI nr
Match: gi|568384715|ref|NP_001275532.1| (auxin-induced protein AUX22-like [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-16
Identity = 49/73 (67.12%), Postives = 53/73 (72.60%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGG--GPFPASKNNENKRVFSEVEVEDH---KSHGQGRSKQAV 60
          +AA+GL LEIT+LRLG PG        SKNNE KRVFSEVEVED    K   +GR KQ V
Sbjct: 4  VAAKGLDLEITELRLGLPGDCCSLISTSKNNEKKRVFSEVEVEDKSRSKGEDEGRRKQVV 63

Query: 61 GWPPVCSYRRRNS 69
          GWPPVCSYRRRNS
Sbjct: 64 GWPPVCSYRRRNS 76

[Close]

BLAST of CmaCh14G013200 vs. NCBI nr
Match: gi|823230471|ref|XP_012447963.1| (PREDICTED: auxin-induced protein AUX22 [Gossypium raimondii])

HSP 1 Score: 82.4 bits (202), Expect = 3.9e-13
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEV--EVEDHKSHG----QGRSKQA 60
          MA EGLGLEIT+LRLG PGGG    ++ NE KRVFSE+  E E+ KS+G    Q +S Q 
Sbjct: 1  MAKEGLGLEITELRLGLPGGG----TEKNEKKRVFSEISEEEENEKSNGPPELQSKS-QV 60

Query: 61 VGWPPVCSYRRRNS 69
          VGWPPVCSYR++NS
Sbjct: 61 VGWPPVCSYRKKNS 69

[Close]

BLAST of CmaCh14G013200 vs. NCBI nr
Match: gi|828322517|ref|XP_012573044.1| (PREDICTED: auxin-induced protein IAA6-like isoform X1 [Cicer arietinum])

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-13
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQG-----RSKQAV 60
          MA EGLG EIT+LRLG PGG P P+   NE KR+FSE+  E  ++   G     +  Q V
Sbjct: 1  MAREGLGFEITELRLGLPGGEP-PSVVKNEKKRMFSEINGEGDENECSGDRKIDKKNQVV 60

Query: 61 GWPPVCSYRRRNSLN 71
          GWPPVCSYR++N++N
Sbjct: 61 GWPPVCSYRKKNTMN 74

[Close]

BLAST of CmaCh14G013200 vs. NCBI nr
Match: gi|828322519|ref|XP_012573045.1| (PREDICTED: auxin-induced protein IAA6-like isoform X2 [Cicer arietinum])

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-13
Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 1  MAAEGLGLEITQLRLGFPGGGPFPASKNNENKRVFSEVEVEDHKSHGQG-----RSKQAV 60
          MA EGLG EIT+LRLG PGG P P+   NE KR+FSE+  E  ++   G     +  Q V
Sbjct: 1  MAREGLGFEITELRLGLPGGEP-PSVVKNEKKRMFSEINGEGDENECSGDRKIDKKNQVV 60

Query: 61 GWPPVCSYRRRNSLN 71
          GWPPVCSYR++N++N
Sbjct: 61 GWPPVCSYRKKNTMN 74

The following BLAST results are available for this feature:

BLAST of CmaCh14G013200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AX22C_VIGRR	1.3e-13	51.32	Auxin-induced protein 22C OS=Vigna radiata var. radiata GN=AUX22C PE=2 SV=1	[more]
AX22A_VIGRR	6.6e-13	55.56	Auxin-induced protein 22A OS=Vigna radiata var. radiata GN=AUX22A PE=2 SV=1	[more]
AUX22_SOYBN	1.5e-12	50.62	Auxin-induced protein AUX22 OS=Glycine max GN=AUX22 PE=2 SV=1	[more]
IAA6_PEA	1.9e-12	54.79	Auxin-induced protein IAA6 OS=Pisum sativum GN=IAA6 PE=2 SV=1	[more]
IAA5_ARATH	2.6e-09	52.24	Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3	[more]

BLAST of CmaCh14G013200 vs. TrEMBL


Match Name	E-value	Identity	Description
Q9SSY3_CUCSA	3.4e-16	67.12	Auxin-responsive protein OS=Cucumis sativus GN=CsIAA1 PE=2 SV=1	[more]
A0A0D2TJ06_GOSRA	2.7e-13	62.16	Auxin-responsive protein OS=Gossypium raimondii GN=B456_009G132300 PE=3 SV=1	[more]
I1KH60_SOYBN	2.3e-12	52.70	Auxin-induced protein OS=Glycine max GN=GLYMA_07G034200 PE=3 SV=1	[more]
C6TBC6_SOYBN	2.3e-12	52.70	Auxin-induced protein (Fragment) OS=Glycine max PE=2 SV=1	[more]
A0A0B2NW48_GLYSO	2.3e-12	52.70	Auxin-induced protein OS=Glycine soja GN=glysoja_009572 PE=3 SV=1	[more]

BLAST of CmaCh14G013200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15580.1	1.5e-10	52.24	indole-3-acetic acid inducible 5	[more]
AT3G15540.1	1.4e-08	37.50	indole-3-acetic acid inducible 19	[more]
AT1G52830.1	5.2e-08	40.00	indole-3-acetic acid 6	[more]
AT1G04240.1	2.9e-06	42.11	AUX/IAA transcriptional regulator family protein	[more]

BLAST of CmaCh14G013200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659093332\|ref\|XP_008447487.1\|	2.9e-16	67.12	PREDICTED: auxin-induced protein AUX22-like [Cucumis melo]	[more]
gi\|568384715\|ref\|NP_001275532.1\|	4.9e-16	67.12	auxin-induced protein AUX22-like [Cucumis sativus]	[more]
gi\|823230471\|ref\|XP_012447963.1\|	3.9e-13	62.16	PREDICTED: auxin-induced protein AUX22 [Gossypium raimondii]	[more]
gi\|828322517\|ref\|XP_012573044.1\|	8.7e-13	53.33	PREDICTED: auxin-induced protein IAA6-like isoform X1 [Cicer arietinum]	[more]
gi\|828322519\|ref\|XP_012573045.1\|	8.7e-13	53.33	PREDICTED: auxin-induced protein IAA6-like isoform X2 [Cicer arietinum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003311	AUX_IAA

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G013200.1	CmaCh14G013200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	FAMILY NOT NAMED	coord: 1..72 score: 2.3
None	No IPR available	PANTHER	PTHR31734:SF12	AUXIN-RESPONSIVE PROTEIN IAA19-RELATED	coord: 1..72 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G013200	CmoCh14G013550	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G013200	CmoCh01G001260	Cucurbita moschata (Rifu)	cmacmoB256
CmaCh14G013200	Cp4.1LG02g14700	Cucurbita pepo (Zucchini)	cmacpeB282
CmaCh14G013200	CsaV3_7G032960	Cucumber (Chinese Long) v3	cmacucB0322

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G013200	CmaCh01G001200	Cucurbita maxima (Rimu)	cmacmaB254

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G013200	Melon (DHL92) v3.6.1	cmamedB250
CmaCh14G013200	Melon (DHL92) v3.6.1	cmamedB261
CmaCh14G013200	Silver-seed gourd	carcmaB0154
CmaCh14G013200	Silver-seed gourd	carcmaB0276
CmaCh14G013200	Silver-seed gourd	carcmaB0798
CmaCh14G013200	Silver-seed gourd	carcmaB1043
CmaCh14G013200	Silver-seed gourd	carcmaB1418
CmaCh14G013200	Watermelon (97103) v2	cmawmbB275
CmaCh14G013200	Watermelon (97103) v2	cmawmbB281
CmaCh14G013200	Wax gourd	cmawgoB0316
CmaCh14G013200	Cucurbita maxima (Rimu)	cmacmaB277
CmaCh14G013200	Cucurbita moschata (Rifu)	cmacmoB249
CmaCh14G013200	Cucurbita moschata (Rifu)	cmacmoB280
CmaCh14G013200	Wild cucumber (PI 183967)	cmacpiB279
CmaCh14G013200	Cucumber (Chinese Long) v2	cmacuB275
CmaCh14G013200	Melon (DHL92) v3.5.1	cmameB221
CmaCh14G013200	Melon (DHL92) v3.5.1	cmameB230
CmaCh14G013200	Watermelon (Charleston Gray)	cmawcgB216
CmaCh14G013200	Watermelon (Charleston Gray)	cmawcgB242
CmaCh14G013200	Watermelon (97103) v1	cmawmB220
CmaCh14G013200	Watermelon (97103) v1	cmawmB232
CmaCh14G013200	Cucurbita pepo (Zucchini)	cmacpeB267
CmaCh14G013200	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G013200	Bottle gourd (USVL1VR-Ls)	cmalsiB238
CmaCh14G013200	Bottle gourd (USVL1VR-Ls)	cmalsiB256
CmaCh14G013200	Cucumber (Gy14) v2	cgybcmaB915