CmaCh14G010240 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh14G010240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionThioredoxin-like family protein
LocationCma_Chr14 : 5393862 .. 5396313 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACAAGTTATCTCATAGGGCATTTCGCCCAAATTCACACACTGCAATTTCACTCTCGTTCTTTGAACAGCGATTCTTCGAAATCCAAGAAGAAGAAAAATGCCGCTGAAGCTACAGGACGCCACCGTCTCCGACTTCAATGCTGTATTCGACAAATTCCGATCGGAGCTGCCAAACAATAAAGCTAATTTCATCCTCTTCTTGGCCGACAAAGACCCCTCCACCTCTCTCAGCTGGTGTCCTGGTACACCAATTCTCTTCTACTTCTTTGTTTTTTCCCCGCTTTTTCTGATACTTGTGAAGATTTTTTCATTTTTTTTGTGGATGCTGTGATTACCGATCTCCAAAGGAAGATGAAAATCGTAAACGTACGCCATTGCTGTTTTGTCTCTGTGTTTTTTAAATTGGGAATTTGTTCTAATCCTGGTTCTGTCGTTACTTCTCGATTTTGATTGCTTGCGTTTTGTCTTCCGAGTTAAATAATTGTAACATGTGTTTGAAGTCCTCGAGTTTTCCTAATCAATTGGAGGGGGATAACTATATCTATGCACACACACACACACCATGTGCTACAGGAGAGACAAGGCTCAAGTATGTGTCCATTTTAAGTCATATATCGCATAGTCTATCTATGAAATTAGATGTTCCTTTGCATGCAATGAAAAACACTTGAAGGAATTAGTTAATTGAAGAAATTATGAAAAACACTTGAAGGAATTAGTTAATTGAAGAGATTATGTAGACAAATGGGTTTCTGTATTTGACTACGAGATTCTATATCATGGACCTGACACTGAGAAACAAAATTTGGAGGTCTCTTGTGATTCTGTATTCATGACTAAACTAGGAAGTTCTTTTTCAAGTTTGCTTACATTTAGGTTTAAGGATTGTCTCCAAGAGTATGAACTTTTTGTAGTGTGGGATTTCTTGGATCATTCCTAGTTCCCACTTTGAGCTTTACATGTTCGATGCAATGTCTAGATGTCTAGATGGAAACATCACGATAGTATTTGATACATTGCTGAATTTGGATTATCTAGCTTCTATTTTGTGCCAAATGGATCCCTTACAAATTCATCATATGTTAAAATTAACAAATACTATGCACTTTATGGATCATTAAATTTTCAATTGTGTCCAATAGTTAATTTTTGATGTACCATTGTCACTGTAGAAAAATTATGGACAATAAAGAAGGAATGTACATTTTCCATTAAGTAGTTTTCTCCATTATCTACGAAATGGTGGACTAGGATTGTAATAGCCTTAAGCTCACCGCTAGCAGATATTGTCCTCCAACAGCCTAAGCCCACCTCTAGCAATTATTGTCCTCTTTGGGTTTAATGCTTCGTTCCCCCTTGCAATTGATGTGCGATCTCACAATTTATTCCCTTTCGGGACTCAGCGTCCTCGCTGACACTCGTTCTCCTTTTCAATCAATGGGGATCTCACAATCCACTCTCCTTCGGGGACCAGTGTCCACCCCCCTTCAGTGCTCAGCGTCTTTGCTGGCACACTGCCAAGTGTCTGGCTTTGATACCATTTGTAACAGTCCAAACACACCGCTAGCAGATATTGTCCTCTTTGAGCTTTCCCTTTCGAGCTTCCTCTTCTCCTTCCCCTCAAGGTTTTTAAAATGCATCTGCTAGAAAGAGGTTTCCATACCCTTATTAACAATGTTTCGTTCCCCCTTCCAACCAATGTGGGATCTCACAAGGATAGCGATAATCCTTTCTTCCACCCTTTGAGTCTATTTACCTCTAATCAATAAGAATTATTAGATGTATGCTATTAGTATTAGCAAGTAGAAGAGCAGCTCAATTGGTCAATAGGTTTGAATTCTCCACCTGTTTGCTGTAGAAACAGGATGCAATCATTAATTGATCTTTGAACTGTTTGGTTTTTGTGTCAGACTGTGTGAGAGCTGAACCAGTAATCTACAAAAAACTGGAAGCAGCATCGGATGATATCGCACTTCTGAGAGCCTATGTTGGAGACAGACCAACATGGAGGAATCCCAGGCATCCATGGAGAGTGGATTCTAGGTTCAAGCTTACTGGAGTTCCAACGCTGGTCCGATGGGAGGCGAATGATAAAATCAGTGGTCGCCTTGAAGACCATGAAGCTCATGTGGAGAAGAAAATTGATGCCCTTATTGCCAATTAACCATTGTTAGTGTCTGCTCCATAACACATTGTTGGGAAGCACCTTTTCCAACTTAATATGCACTACATTCCTGAGGAACTTATATGTGATGCCTCAGTTATAGAACTATCCCATAAATAAAGCTTCATGAGAGTTCACAGTTTACTATTCCGCTGAAAATGGAAGAACACTTAGGGTATCTTCGTATGAATCTCCATTAAAAATTTGACATTTATTTTCTGGAAACCAGAAAAAATGTGTCATCTCTCCCAAGTTTCTAATAGTAATGATTTCTTGTAGCTTTTAT

mRNA sequence

TGACAAGTTATCTCATAGGGCATTTCGCCCAAATTCACACACTGCAATTTCACTCTCGTTCTTTGAACAGCGATTCTTCGAAATCCAAGAAGAAGAAAAATGCCGCTGAAGCTACAGGACGCCACCGTCTCCGACTTCAATGCTGTATTCGACAAATTCCGATCGGAGCTGCCAAACAATAAAGCTAATTTCATCCTCTTCTTGGCCGACAAAGACCCCTCCACCTCTCTCAGCTGGTGTCCTGACTGTGTGAGAGCTGAACCAGTAATCTACAAAAAACTGGAAGCAGCATCGGATGATATCGCACTTCTGAGAGCCTATGTTGGAGACAGACCAACATGGAGGAATCCCAGGCATCCATGGAGAGTGGATTCTAGGTTCAAGCTTACTGGAGTTCCAACGCTGGTCCGATGGGAGGCGAATGATAAAATCAGTGGTCGCCTTGAAGACCATGAAGCTCATGTGGAGAAGAAAATTGATGCCCTTATTGCCAATTAACCATTGTTAGTGTCTGCTCCATAACACATTGTTGGGAAGCACCTTTTCCAACTTAATATGCACTACATTCCTGAGGAACTTATATGTGATGCCTCAGTTATAGAACTATCCCATAAATAAAGCTTCATGAGAGTTCACAGTTTACTATTCCGCTGAAAATGGAAGAACACTTAGGGTATCTTCGTATGAATCTCCATTAAAAATTTGACATTTATTTTCTGGAAACCAGAAAAAATGTGTCATCTCTCCCAAGTTTCTAATAGTAATGATTTCTTGTAGCTTTTAT

Coding sequence (CDS)

ATGCCGCTGAAGCTACAGGACGCCACCGTCTCCGACTTCAATGCTGTATTCGACAAATTCCGATCGGAGCTGCCAAACAATAAAGCTAATTTCATCCTCTTCTTGGCCGACAAAGACCCCTCCACCTCTCTCAGCTGGTGTCCTGACTGTGTGAGAGCTGAACCAGTAATCTACAAAAAACTGGAAGCAGCATCGGATGATATCGCACTTCTGAGAGCCTATGTTGGAGACAGACCAACATGGAGGAATCCCAGGCATCCATGGAGAGTGGATTCTAGGTTCAAGCTTACTGGAGTTCCAACGCTGGTCCGATGGGAGGCGAATGATAAAATCAGTGGTCGCCTTGAAGACCATGAAGCTCATGTGGAGAAGAAAATTGATGCCCTTATTGCCAATTAA

Protein sequence

MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKKLEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEAHVEKKIDALIAN
Homology
[Close]
BLAST of CmaCh14G010240 vs. Swiss-Prot
Match: TCLOT_ARATH (Thioredoxin-like protein Clot OS=Arabidopsis thaliana GN=At5g42850 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.0e-42
Identity = 81/132 (61.36%), Postives = 95/132 (71.97%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRS-ELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYK 60
           M LK  DA  S   +   + +S E   +K NFILFLAD DP+T  SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 61  KLEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHE 120
            LE   +++ L+RAY GDRPTWR P HPWRVDSRFKLTGVPTLVRW+  D + GRLEDH+
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRWD-GDSVKGRLEDHQ 120

Query: 121 AHVEKKIDALIA 132
           AH+   I  L+A
Sbjct: 121 AHLPHLILPLLA 131

[Close]
BLAST of CmaCh14G010240 vs. Swiss-Prot
Match: OCLOT_ORYSJ (Thioredoxin-like protein Clot OS=Oryza sativa subsp. japonica GN=Os06g0320000 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-37
Identity = 74/136 (54.41%), Postives = 97/136 (71.32%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKF--RSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIY 60
           M ++  DATV+DF+A FDK     +    K   +LFLAD+D S++ +WCPDC  AEPVIY
Sbjct: 1   MTVEKVDATVADFDAHFDKLFAAGDDAEGKVKLLLFLADRDASSNQTWCPDCNVAEPVIY 60

Query: 61  KKLEAASD----DIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGR 120
            ++EAA+     D+ LLRAYVGD+PTWR+P HPWR D RF+LTGVPTL+RWE N   + R
Sbjct: 61  DRVEAAAKGKEKDVVLLRAYVGDKPTWRDPAHPWRADPRFRLTGVPTLIRWE-NGAAAAR 120

Query: 121 LEDHEAHVEKKIDALI 131
           L D EAH+  K+DA++
Sbjct: 121 LGDDEAHLADKVDAVV 135

[Close]
BLAST of CmaCh14G010240 vs. Swiss-Prot
Match: TXD17_MOUSE (Thioredoxin domain-containing protein 17 OS=Mus musculus GN=Txndc17 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-12
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 1 

Query: 17  FDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKKLEAASDDIALLRAYVG 76
           FDK   E    K  F  F   KD +   SWCPDCV AEPVI + L+  ++D   +   VG
Sbjct: 15  FDKAVKE-HEGKTIFAYFSGSKD-TEGKSWCPDCVEAEPVIREGLKHVTEDCVFIYCQVG 74

Query: 77  DRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKI 112
           D+P W++P + +R   + K+T VPTL+++    K+
Sbjct: 75  DKPYWKDPNNDFR--QKLKITAVPTLLKYGTPQKL 105

[Close]
BLAST of CmaCh14G010240 vs. Swiss-Prot
Match: TXD17_PONAB (Thioredoxin domain-containing protein 17 OS=Pongo abelii GN=TXNDC17 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.1e-12
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 17  FDKFRS--ELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKKLEAASDDIALLRAY 76
           F++F    E  N K  F  F   KD     SWCPDCV+AEPV+ + L+  S+    +   
Sbjct: 12  FEEFHRAVEQHNGKTIFAYFTGSKDAGGK-SWCPDCVQAEPVVREGLKHISEGCVFIYCQ 71

Query: 77  VGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKI 112
           VG++P W++P + +R     K+T VPTL+++    K+
Sbjct: 72  VGEKPYWKDPNNDFR--KNLKVTAVPTLIKYGTPQKL 105

[Close]
BLAST of CmaCh14G010240 vs. Swiss-Prot
Match: TXD17_HUMAN (Thioredoxin domain-containing protein 17 OS=Homo sapiens GN=TXNDC17 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 35/97 (36.08%), Postives = 54/97 (55.67%), Query Frame = 1 

Query: 17  FDKFRS--ELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKKLEAASDDIALLRAY 76
           F++F    E  N K  F  F   KD     SWCPDCV+AEPV+ + L+  S+    +   
Sbjct: 12  FEEFHRAVEQHNGKTIFAYFTGSKDAGGK-SWCPDCVQAEPVVREGLKHISEGCVFIYCQ 71

Query: 77  VGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKI 112
           VG++P W++P + +R     K+T VPTL+++    K+
Sbjct: 72  VGEKPYWKDPNNDFR--KNLKVTAVPTLLKYGTPQKL 105

[Close]
BLAST of CmaCh14G010240 vs. TrEMBL
Match: A0A0A0LEX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G701560 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.4e-67
Identity = 123/131 (93.89%), Postives = 126/131 (96.18%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLK+ DATVSDF+AVFDKFRSELPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATVSDFSAVFDKFRSELPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEAASDDIALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPQHPWRVDPRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVE KIDALIA
Sbjct: 121 HVENKIDALIA 131

[Close]
BLAST of CmaCh14G010240 vs. TrEMBL
Match: M5XL63_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013260mg PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-60
Identity = 111/131 (84.73%), Postives = 119/131 (90.84%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DAT+S F++VF+KFR+E P NKAN ILFLADKDPSTSLSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLLDATISTFDSVFEKFRAEAPKNKANLILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA +DD+ALLRAYVGDRPTWRNP HPWRVDSRFKLTGVPTL RWE ND I GRLEDHEA
Sbjct: 61  LEATADDVALLRAYVGDRPTWRNPVHPWRVDSRFKLTGVPTLFRWE-NDAIKGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVE KIDAL+A
Sbjct: 121 HVESKIDALVA 130

[Close]
BLAST of CmaCh14G010240 vs. TrEMBL
Match: A0A067L4N1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16713 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.4e-60
Identity = 111/131 (84.73%), Postives = 121/131 (92.37%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DATVS+F++VF+ FRSE P NKAN ILFLADKDPST+LSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLVDATVSNFDSVFEMFRSEAPKNKANLILFLADKDPSTNLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA+SDDIALLRAYVGDRPTWRNP+HPWRVDSRFKLTGVPTLV WE ND I GRLEDHEA
Sbjct: 61  LEASSDDIALLRAYVGDRPTWRNPQHPWRVDSRFKLTGVPTLVSWE-NDVIKGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           H+E KIDAL++
Sbjct: 121 HLEHKIDALVS 130

[Close]
BLAST of CmaCh14G010240 vs. TrEMBL
Match: W9QYW1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013059 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.4e-60
Identity = 111/131 (84.73%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DATVS+F ++F+KF SE   NKAN ILFLADKDPSTSLSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLLDATVSNFESIFEKFISESTKNKANLILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA SDD+ALLRAYVGDRPTWRNP HPWRVDSRFKLTGVPTL+RWE ND I+GRLEDHEA
Sbjct: 61  LEATSDDVALLRAYVGDRPTWRNPPHPWRVDSRFKLTGVPTLIRWE-NDAITGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVEKKI+AL+A
Sbjct: 121 HVEKKIEALVA 130

[Close]
BLAST of CmaCh14G010240 vs. TrEMBL
Match: V5IV10_HEVBR (Thioredoxin-like family protein OS=Hevea brasiliensis GN=Trxl2 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-58
Identity = 110/132 (83.33%), Postives = 120/132 (90.91%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DATVS F+ VF+KFRSE P NKAN ILFLADKDPST+LSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLLDATVSTFDGVFEKFRSEAPKNKANLILFLADKDPSTNLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA+SDDIALLRAYVGDRPTWRNP+HPWRVDSRFKLTGVPTLV WE ND I GRLED+EA
Sbjct: 61  LEASSDDIALLRAYVGDRPTWRNPQHPWRVDSRFKLTGVPTLVSWE-NDAIKGRLEDNEA 120

Query: 121 HVEKKIDALIAN 133
            +E KIDAL+++
Sbjct: 121 DLEHKIDALVSS 131

[Close]
BLAST of CmaCh14G010240 vs. TAIR10
Match: AT5G42850.1 (AT5G42850.1 Thioredoxin superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 2.8e-43
Identity = 81/132 (61.36%), Postives = 95/132 (71.97%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRS-ELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYK 60
           M LK  DA  S   +   + +S E   +K NFILFLAD DP+T  SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 61  KLEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHE 120
            LE   +++ L+RAY GDRPTWR P HPWRVDSRFKLTGVPTLVRW+  D + GRLEDH+
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRWD-GDSVKGRLEDHQ 120

Query: 121 AHVEKKIDALIA 132
           AH+   I  L+A
Sbjct: 121 AHLPHLILPLLA 131

[Close]
BLAST of CmaCh14G010240 vs. NCBI nr
Match: gi|778682846|ref|XP_011651794.1| (PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 3.5e-67
Identity = 123/131 (93.89%), Postives = 126/131 (96.18%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLK+ DATVSDF+AVFDKFRSELPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATVSDFSAVFDKFRSELPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEAASDDIALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDIALLRAYVGDRPTWRNPQHPWRVDPRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVE KIDALIA
Sbjct: 121 HVENKIDALIA 131

[Close]
BLAST of CmaCh14G010240 vs. NCBI nr
Match: gi|659123666|ref|XP_008461777.1| (PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-66
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLK+ DAT+SDFNAVFDKFRS+LPNNKANFILFLADKDPSTS SWCPDCVRAEPVIYKK
Sbjct: 1   MPLKVVDATLSDFNAVFDKFRSQLPNNKANFILFLADKDPSTSRSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEAASDD ALLRAYVGDRPTWRNP+HPWRVD RFKLTGVPTLVRWE NDKISGRLEDHEA
Sbjct: 61  LEAASDDTALLRAYVGDRPTWRNPQHPWRVDCRFKLTGVPTLVRWEENDKISGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVE KIDALIA
Sbjct: 121 HVENKIDALIA 131

[Close]
BLAST of CmaCh14G010240 vs. NCBI nr
Match: gi|596010806|ref|XP_007218586.1| (hypothetical protein PRUPE_ppa013260mg [Prunus persica])

HSP 1 Score: 239.2 bits (609), Expect = 4.1e-60
Identity = 111/131 (84.73%), Postives = 119/131 (90.84%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DAT+S F++VF+KFR+E P NKAN ILFLADKDPSTSLSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLLDATISTFDSVFEKFRAEAPKNKANLILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA +DD+ALLRAYVGDRPTWRNP HPWRVDSRFKLTGVPTL RWE ND I GRLEDHEA
Sbjct: 61  LEATADDVALLRAYVGDRPTWRNPVHPWRVDSRFKLTGVPTLFRWE-NDAIKGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVE KIDAL+A
Sbjct: 121 HVESKIDALVA 130

[Close]
BLAST of CmaCh14G010240 vs. NCBI nr
Match: gi|694327660|ref|XP_009354687.1| (PREDICTED: thioredoxin-like protein Clot [Pyrus x bretschneideri])

HSP 1 Score: 238.4 bits (607), Expect = 7.0e-60
Identity = 109/131 (83.21%), Postives = 119/131 (90.84%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DAT+S F++ F+KF++E PNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLSDATISTFDSAFEKFKAEAPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA  DD+ALLRAYVGDRPTWRN  HPWRVDSRFKLTGVPTL+RWE ND I GRLEDHEA
Sbjct: 61  LEATPDDVALLRAYVGDRPTWRNAHHPWRVDSRFKLTGVPTLIRWE-NDAIKGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           HVE KI+AL+A
Sbjct: 121 HVENKINALLA 130

[Close]
BLAST of CmaCh14G010240 vs. NCBI nr
Match: gi|802555567|ref|XP_012065509.1| (PREDICTED: thioredoxin-like protein Clot [Jatropha curcas])

HSP 1 Score: 238.0 bits (606), Expect = 9.2e-60
Identity = 111/131 (84.73%), Postives = 121/131 (92.37%), Query Frame = 1 

Query: 1   MPLKLQDATVSDFNAVFDKFRSELPNNKANFILFLADKDPSTSLSWCPDCVRAEPVIYKK 60
           MPLKL DATVS+F++VF+ FRSE P NKAN ILFLADKDPST+LSWCPDCVRAEPVIYKK
Sbjct: 1   MPLKLVDATVSNFDSVFEMFRSEAPKNKANLILFLADKDPSTNLSWCPDCVRAEPVIYKK 60

Query: 61  LEAASDDIALLRAYVGDRPTWRNPRHPWRVDSRFKLTGVPTLVRWEANDKISGRLEDHEA 120
           LEA+SDDIALLRAYVGDRPTWRNP+HPWRVDSRFKLTGVPTLV WE ND I GRLEDHEA
Sbjct: 61  LEASSDDIALLRAYVGDRPTWRNPQHPWRVDSRFKLTGVPTLVSWE-NDVIKGRLEDHEA 120

Query: 121 HVEKKIDALIA 132
           H+E KIDAL++
Sbjct: 121 HLEHKIDALVS 130

The following BLAST results are available for this feature:
BLAST of CmaCh14G010240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCLOT_ARATH5.0e-4261.36Thioredoxin-like protein Clot OS=Arabidopsis thaliana GN=At5g42850 PE=2 SV=1[more]
OCLOT_ORYSJ2.2e-3754.41Thioredoxin-like protein Clot OS=Oryza sativa subsp. japonica GN=Os06g0320000 PE... [more]
TXD17_MOUSE1.9e-1238.95Thioredoxin domain-containing protein 17 OS=Mus musculus GN=Txndc17 PE=1 SV=1[more]
TXD17_PONAB7.1e-1236.08Thioredoxin domain-containing protein 17 OS=Pongo abelii GN=TXNDC17 PE=2 SV=1[more]
TXD17_HUMAN1.2e-1136.08Thioredoxin domain-containing protein 17 OS=Homo sapiens GN=TXNDC17 PE=1 SV=1[more]
BLAST of CmaCh14G010240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEX6_CUCSA2.4e-6793.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G701560 PE=4 SV=1[more]
M5XL63_PRUPE2.9e-6084.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013260mg PE=4 SV=1[more]
A0A067L4N1_JATCU6.4e-6084.73Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16713 PE=4 SV=1[more]
W9QYW1_9ROSA6.4e-6084.73Uncharacterized protein OS=Morus notabilis GN=L484_013059 PE=4 SV=1[more]
V5IV10_HEVBR1.2e-5883.33Thioredoxin-like family protein OS=Hevea brasiliensis GN=Trxl2 PE=2 SV=1[more]
BLAST of CmaCh14G010240 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42850.12.8e-4361.36 Thioredoxin superfamily protein[more]
BLAST of CmaCh14G010240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778682846|ref|XP_011651794.1|3.5e-6793.89PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis sativus][more]
gi|659123666|ref|XP_008461777.1|1.7e-6692.37PREDICTED: thioredoxin-like protein Clot isoform X2 [Cucumis melo][more]
gi|596010806|ref|XP_007218586.1|4.1e-6084.73hypothetical protein PRUPE_ppa013260mg [Prunus persica][more]
gi|694327660|ref|XP_009354687.1|7.0e-6083.21PREDICTED: thioredoxin-like protein Clot [Pyrus x bretschneideri][more]
gi|802555567|ref|XP_012065509.1|9.2e-6084.73PREDICTED: thioredoxin-like protein Clot [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010357DUF953_thioredox
IPR012336Thioredoxin-like_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0030206 chondroitin sulfate biosynthetic process
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
molecular_function GO:0030158 protein xylosyltransferase activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0047134 protein-disulfide reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G010240.1CmaCh14G010240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010357Protein of unknown function DUF953, thioredoxin-likePANTHERPTHR1245242-9-9 PROTEIN-RELATEDcoord: 1..131
score: 3.2
IPR010357Protein of unknown function DUF953, thioredoxin-likePFAMPF06110DUF953coord: 13..130
score: 9.0
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 10..130
score: 9.2
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 18..123
score: 9.47

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh14G010240Cucsa.177690Cucumber (Gy14) v1cgycmaB0497
CmaCh14G010240Cla017245Watermelon (97103) v1cmawmB227
CmaCh14G010240Csa3G701560Cucumber (Chinese Long) v2cmacuB241
CmaCh14G010240MELO3C023952Melon (DHL92) v3.5.1cmameB226
CmaCh14G010240ClCG10G012580Watermelon (Charleston Gray)cmawcgB221
CmaCh14G010240CSPI03G29890Wild cucumber (PI 183967)cmacpiB243
CmaCh14G010240CmoCh14G010430Cucurbita moschata (Rifu)cmacmoB244
CmaCh14G010240Lsi03G012270Bottle gourd (USVL1VR-Ls)cmalsiB240
CmaCh14G010240Cp4.1LG03g09060Cucurbita pepo (Zucchini)cmacpeB283
CmaCh14G010240MELO3C023952.2Melon (DHL92) v3.6.1cmamedB257
CmaCh14G010240CsaV3_3G032370Cucumber (Chinese Long) v3cmacucB0280
CmaCh14G010240Cla97C10G195410Watermelon (97103) v2cmawmbB248
CmaCh14G010240Bhi11G001206Wax gourdcmawgoB0289
CmaCh14G010240CsGy3G027710Cucumber (Gy14) v2cgybcmaB307
CmaCh14G010240Carg11240Silver-seed gourdcarcmaB1132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh14G010240Cucurbita pepo (Zucchini)cmacpeB260
CmaCh14G010240Cucurbita pepo (Zucchini)cmacpeB269
CmaCh14G010240Cucurbita pepo (Zucchini)cmacpeB279
CmaCh14G010240Cucumber (Gy14) v2cgybcmaB911
CmaCh14G010240Silver-seed gourdcarcmaB0496
CmaCh14G010240Silver-seed gourdcarcmaB0624
CmaCh14G010240Silver-seed gourdcarcmaB1057
CmaCh14G010240Cucurbita maxima (Rimu)cmacmaB250
CmaCh14G010240Cucurbita maxima (Rimu)cmacmaB255
CmaCh14G010240Cucurbita maxima (Rimu)cmacmaB293
CmaCh14G010240Cucurbita moschata (Rifu)cmacmoB252
CmaCh14G010240Cucurbita moschata (Rifu)cmacmoB257
CmaCh14G010240Cucurbita moschata (Rifu)cmacmoB276
CmaCh14G010240Watermelon (Charleston Gray)cmawcgB220
CmaCh14G010240Watermelon (97103) v1cmawmB226