CmaCh14G004870 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G004870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transducin/WD40 repeat-like superfamily protein
Location	Cma_Chr14 : 2385362 .. 2387603 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCATCAATCTTTAAAAGGATCTCCATTGGAAAATCCGACTACGGACCCGAACCAGTGGGCGGGAAAATCCGGTGCTCAAACAATCCAAGAACTTCGCCGGAATCAAATTCAGTTCTCGAGCTGAATTGGGCAGAAATTCAGTCATTTGATCCATTTAGGGCTTTTAAGTTTCCTCATAATGCCTTCATTTCCTCCTCCTGGGTCTGTTACCATCTGCGAAATCAATCGCGACCTCAGTTAGTATCGAATTCTTACTTTGCTTCTCATGTATATAGTTCCAGTGTTCTACTTTTTATGATATTGAGCATCTGTTTTGTGAATTTCTTACTATTCAGTTACTGCTGATCGAATCTCCGATGATCTAGCGAACGACACTTATGGGAAAGTCCTTGTGAGTAATGATAGTTGAAATTTATTGTTGATGTTAGCGTTCTCTTCAGGCGCGATGTTTTTTGTTTATTGAATTTGTGGATGTGGCGTTTAACAGGGTATGGTGTTTAGTCCTGTTCCATTTCAGTCCGATTTTTTGGTGTCGCCGAATCCTGAACCGAACAATGAGGCTAGAAACGATGAAGCAAATGGGGAAAGTATCCAAAGGAAGAGTGTGATTGCATCTTTGCAGGGATTCCTCGAGGACTCCATCAAGCGTTTTTTACGTCCTAATGATGTAAGTTTAATAATTGTTAATAGCTAATCGTGTGGTTCAGAATCATTTCTAAATGCCGGTACAGTTCAGAAGAACTGTGTGTAGTTTTGTTCCATCCTTTTTTATTTTTTGTTTACAAGAGATCAGTCTTAAATGTTTTCTCTTAACAAATGAAAATATTCCATTTCATCTAAACAAAGAAAATTTTGGCTCAAAAAAGAAGAATTTGATTGTCTACATGAAATTAGTTTGCTAACCCAACTTCATAACAATAACAATCCTTCAATATCATTTTGTGTAAGGCATTCTGAAATCCTAGATCTTGTTCAATATAATTCATACCTAAGGCACTATAACACGATAAATTGTTAGGTTAGGAAATATTTGTAAGCATTTCCGCACGGACAACTTCGTTGCACTTAGGGACACATAGAGAAAAAATTGCTAGGCAATTTAATTTTAGTTTGCTATTACATTTTAATTGTTGTATCCTACTCCTACTGGCGTACCCTATATATATTGGCAACAAGGAAACATTTTGAAGTTCATGGTGCCTTTAAGTTTTTACTTAGAAATGATTGTTGGGGTTCAATAAATTCGAATACAGAAGATATGAAATTTAAAATGGTGTCTTTAAATTACACATCCATTGTAATTTTTAGGAAGTTCATCATTTCTTTTTTTGCATGGATAAAAATGGTTGCTTTATGGAACTCTATTTACTTTGAAGTTCTGAAGTTGTTAAAAGATACATTGGAGTTTAGTAAATTGACTGCAACGTGCATTCCAAAAGTAAAGCACATGCTTTGTAACTTGTGAATGAAAGTTAAGCAACTTATGCTCACTGATCAATTTTATAGGTAAAATACTTACCAGCAGAATATCTTCAAGGAATGAGTTGGCACCAGCACAAGCATATTTTAGCATTCATATCTGGGACGAATCAAGTTGTTGTCCGTGATTTTGAAAATGCAGGTCATCGAATCTGATTCACCATATGACTTGGTTAAAGTTTTGTAATCTTTTTATTTGTATATAGAAGTAGCGTTGTTGTATTTGTACTGTTCATTTCATCTTAGAATTTGTTGTTCAATTTCTTTCAAATAATGCGAATGTATTTTATGTTCTGGACAGAAGGAAAAGACCCTTGCATTTTGACCCACGACTTGCAAAAGGATGTTAAAGTTCTTGAGTGGAGACCAAATGGCGGGAGGACCCTTTCGGTGGCATGCAAGTAAGTACCTTAGAGCTGCAATCTTATCATTTAAAATAAACACTATATATCTTAGAACTTTAGATGACAAAACTATTTCTCGCAAGAATGTTTACCATTAACTCAACTTGAGATTCTTGGACTGAATGTTCTTTCAGAGATGGAATTTGCATCTGGGCTGCTTCTTTCCCAGGAAATGCTGCTTCGGTGAGACCTGGTGCCGTGTCCTTTTTAGGATCATTCTCAAGAGGCTCTGGGGTTCGATATACCCTAGTTGATTTTCTTCGGACCCGTGATGAACAGATTAGTGCCCTGTCATGGAGTCCTGATGGAAGATATCCAAATAAATTAAAGAAATTTAGTCCTTTGCATGATAGTTGA

mRNA sequence

TCTCATCAATCTTTAAAAGGATCTCCATTGGAAAATCCGACTACGGACCCGAACCAGTGGGCGGGAAAATCCGGTGCTCAAACAATCCAAGAACTTCGCCGGAATCAAATTCAGTTCTCGAGCTGAATTGGGCAGAAATTCAGTCATTTGATCCATTTAGGGCTTTTAAGTTTCCTCATAATGCCTTCATTTCCTCCTCCTGGGTCTGTTACCATCTGCGAAATCAATCGCGACCTCATTACTGCTGATCGAATCTCCGATGATCTAGCGAACGACACTTATGGGAAAGTCCTTGGTATGGTGTTTAGTCCTGTTCCATTTCAGTCCGATTTTTTGGTGTCGCCGAATCCTGAACCGAACAATGAGGCTAGAAACGATGAAGCAAATGGGGAAAGTATCCAAAGGAAGAGTGTGATTGCATCTTTGCAGGGATTCCTCGAGGACTCCATCAAGCGTTTTTTACGTCCTAATGATGTAAAATACTTACCAGCAGAATATCTTCAAGGAATGAGTTGGCACCAGCACAAGCATATTTTAGCATTCATATCTGGGACGAATCAAGTTGTTGTCCGTGATTTTGAAAATGCAGAAGGAAAAGACCCTTGCATTTTGACCCACGACTTGCAAAAGGATGTTAAAGTTCTTGAGTGGAGACCAAATGGCGGGAGGACCCTTTCGGTGGCATGCAAAGATGGAATTTGCATCTGGGCTGCTTCTTTCCCAGGAAATGCTGCTTCGGTGAGACCTGGTGCCGTGTCCTTTTTAGGATCATTCTCAAGAGGCTCTGGGGTTCGATATACCCTAGTTGATTTTCTTCGGACCCGTGATGAACAGATTAGTGCCCTGTCATGGAGTCCTGATGGAAGATATCCAAATAAATTAAAGAAATTTAGTCCTTTGCATGATAGTTGA

Coding sequence (CDS)

ATGCCTTCATTTCCTCCTCCTGGGTCTGTTACCATCTGCGAAATCAATCGCGACCTCATTACTGCTGATCGAATCTCCGATGATCTAGCGAACGACACTTATGGGAAAGTCCTTGGTATGGTGTTTAGTCCTGTTCCATTTCAGTCCGATTTTTTGGTGTCGCCGAATCCTGAACCGAACAATGAGGCTAGAAACGATGAAGCAAATGGGGAAAGTATCCAAAGGAAGAGTGTGATTGCATCTTTGCAGGGATTCCTCGAGGACTCCATCAAGCGTTTTTTACGTCCTAATGATGTAAAATACTTACCAGCAGAATATCTTCAAGGAATGAGTTGGCACCAGCACAAGCATATTTTAGCATTCATATCTGGGACGAATCAAGTTGTTGTCCGTGATTTTGAAAATGCAGAAGGAAAAGACCCTTGCATTTTGACCCACGACTTGCAAAAGGATGTTAAAGTTCTTGAGTGGAGACCAAATGGCGGGAGGACCCTTTCGGTGGCATGCAAAGATGGAATTTGCATCTGGGCTGCTTCTTTCCCAGGAAATGCTGCTTCGGTGAGACCTGGTGCCGTGTCCTTTTTAGGATCATTCTCAAGAGGCTCTGGGGTTCGATATACCCTAGTTGATTTTCTTCGGACCCGTGATGAACAGATTAGTGCCCTGTCATGGAGTCCTGATGGAAGATATCCAAATAAATTAAAGAAATTTAGTCCTTTGCATGATAGTTGA

Protein sequence

MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPNNEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILAFISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASFPGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRYPNKLKKFSPLHDS

Homology

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BLAST of CmaCh14G004870 vs. Swiss-Prot
Match: AAAS_ARATH (Aladin OS=Arabidopsis thaliana GN=AAAS PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75
Identity = 143/233 (61.37%), Postives = 176/233 (75.54%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           M SFP PGSVT+CEINRDLITA  +SD+ A +TYGKVLGMVFSPV F S    +P+    
Sbjct: 1   MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDS----TPSSLQE 60

Query: 61  NEARN--DEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHI 120
           NE +   D+A+GES   K ++A+LQ  + DS+K+ L+P DV  L    LQG+SWHQ KHI
Sbjct: 61  NEGQENGDKASGES---KGLVATLQMKVADSLKQILQPTDVTLLSEIDLQGVSWHQGKHI 120

Query: 121 LAFISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAA 180
           +AFISG NQV +RD+E+ + K+PCILT D Q++VK LEWRPNGG++LS+AC+ GICIWAA
Sbjct: 121 IAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAA 180

Query: 181 SFPGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTR-DEQISALSWSPDGRY 231
           S+PGN A VR G  +  GS SRGSG R+ LVDFLR + DEQISALSWSP GRY
Sbjct: 181 SYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRY 226

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BLAST of CmaCh14G004870 vs. TrEMBL
Match: A0A0A0LH99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816680 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 2.7e-120
Identity = 207/230 (90.00%), Postives = 216/230 (93.91%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITAD +SDD ANDTYGK+LGMVFSPVPFQSDFLVSP PEP 
Sbjct: 1   MPSFPPPGSVTICEINRDLITADCLSDDRANDTYGKILGMVFSPVPFQSDFLVSPTPEPK 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NE RNDE NGE IQRK VIASLQGF+E S+ R LRPNDVKYLP EYLQG+SWHQHKHI+A
Sbjct: 61  NEPRNDEVNGEIIQRKGVIASLQGFIEGSVNRLLRPNDVKYLPTEYLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRD+ENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACK GICIWAASF
Sbjct: 121 FISGTNQVVVRDYENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLR+ DEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRSHDEQISALSWSPDGRY 230

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BLAST of CmaCh14G004870 vs. TrEMBL
Match: M5W213_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005975mg PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-87
Identity = 161/235 (68.51%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFP PGSV+ICEINRDLITA+ +SDD+A DTYGK+LGMVFSPVPFQSD L  P P P 
Sbjct: 1   MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQSDQLARP-PSPE 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
            +   D+    +   K ++ +LQG L  S+     PN V  LP   LQG+SWHQHKHI+A
Sbjct: 61  QD---DQQVATTAPTKGLLQTLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG NQV+VRDFE++EGK+PCIL ++ Q++VKVLEWRPNGGR LSVAC  GICIWAASF
Sbjct: 121 FISGPNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRD-EQISALSWSPDGRYPNKL 235
           PG+AASVR GA SFLG+ SRGSGVRYTLVDFLR+ + EQISALSWSPDGRYPN L
Sbjct: 181 PGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYPNNL 231

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BLAST of CmaCh14G004870 vs. TrEMBL
Match: V4SXF2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011725mg PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 6.8e-84
Identity = 153/231 (66.23%), Postives = 180/231 (77.92%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFP PGSVT+CEINRDLITAD +SDD A DTYGKVLGMVF+PVPFQSD L S +P+  
Sbjct: 1   MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDTQ 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
              +     GE +      ++L G +  SIK  L P+ V  LP   LQG+SWHQHKHI+A
Sbjct: 61  ESEQRGREEGEGL-----FSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG+ QV+VRD+E++EGKD CILT D Q+DVKVLEWRPNGGR+LSV CK GICIWA S+
Sbjct: 121 FISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRD-EQISALSWSPDGRY 231
           PGNAASVR GA SFLG+ SRG G R+TLVDFLR+++ EQI+ALSW PDGRY
Sbjct: 181 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRY 226

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BLAST of CmaCh14G004870 vs. TrEMBL
Match: A0A067F1M0_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0133382mg PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.9e-84
Identity = 153/231 (66.23%), Postives = 180/231 (77.92%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFP PGSVT+CEINRDLITAD +SDD A DTYGKVLGMVF+PVPFQSD L S +P+  
Sbjct: 1   MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQ 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
              +     GE +      ++L G +  SIK  L P+ V  LP   LQG+SWHQHKHI+A
Sbjct: 61  ESEQRGREEGEGL-----FSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG+ QV+VRD+E++EGKD CILT D Q+DVKVLEWRPNGGR+LSV CK GICIWA S+
Sbjct: 121 FISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRD-EQISALSWSPDGRY 231
           PGNAASVR GA SFLG+ SRG G R+TLVDFLR+++ EQI+ALSW PDGRY
Sbjct: 181 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRY 226

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BLAST of CmaCh14G004870 vs. TrEMBL
Match: A0A067EQD9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0133382mg PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.8e-82
Identity = 152/232 (65.52%), Postives = 180/232 (77.59%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFP PGSVT+CEINRDLITAD +SDD A DTYGKVLGMVF+PVPFQSD L S +P+  
Sbjct: 1   MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDRQ 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
              +     GE +      ++L G +  SIK  L P+ V  LP   LQG+SWHQHKHI+A
Sbjct: 61  ESEQRGREEGEGL-----FSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG+ QV+VRD+E++ GKD CILT D Q+DVKVLEWRPNGGR+LSV CK GICIWA S+
Sbjct: 121 FISGSTQVIVRDYEDS-GKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRD-EQISALSWSPDGRYP 232
           PGNAASVR GA SFLG+ SRG G R+TLVDFLR+++ EQI+ALSW PDGR+P
Sbjct: 181 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRFP 226

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BLAST of CmaCh14G004870 vs. TAIR10
Match: AT3G56900.1 (AT3G56900.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 283.9 bits (725), Expect = 9.4e-77
Identity = 143/233 (61.37%), Postives = 176/233 (75.54%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           M SFP PGSVT+CEINRDLITA  +SD+ A +TYGKVLGMVFSPV F S    +P+    
Sbjct: 1   MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDS----TPSSLQE 60

Query: 61  NEARN--DEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHI 120
           NE +   D+A+GES   K ++A+LQ  + DS+K+ L+P DV  L    LQG+SWHQ KHI
Sbjct: 61  NEGQENGDKASGES---KGLVATLQMKVADSLKQILQPTDVTLLSEIDLQGVSWHQGKHI 120

Query: 121 LAFISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAA 180
           +AFISG NQV +RD+E+ + K+PCILT D Q++VK LEWRPNGG++LS+AC+ GICIWAA
Sbjct: 121 IAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAA 180

Query: 181 SFPGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTR-DEQISALSWSPDGRY 231
           S+PGN A VR G  +  GS SRGSG R+ LVDFLR + DEQISALSWSP GRY
Sbjct: 181 SYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRY 226

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BLAST of CmaCh14G004870 vs. NCBI nr
Match: gi|659085037|ref|XP_008443209.1| (PREDICTED: aladin [Cucumis melo])

HSP 1 Score: 440.3 bits (1131), Expect = 2.2e-120
Identity = 209/230 (90.87%), Postives = 217/230 (94.35%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITAD +SDD ANDTYGKVLGMVFSPVPFQSDFLVSP PEP 
Sbjct: 1   MPSFPPPGSVTICEINRDLITADCLSDDRANDTYGKVLGMVFSPVPFQSDFLVSPTPEPK 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NE RNDEANGE IQRK VIASLQGF+E SI RFLRPNDVKYLP EYLQG+SWHQHKHI+A
Sbjct: 61  NEPRNDEANGEIIQRKGVIASLQGFIEGSINRFLRPNDVKYLPTEYLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVV D+ENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACK GICIWAASF
Sbjct: 121 FISGTNQVVVHDYENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLR+ DEQISALSWSP+GRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRSHDEQISALSWSPNGRY 230

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BLAST of CmaCh14G004870 vs. NCBI nr
Match: gi|778685097|ref|XP_011652161.1| (PREDICTED: aladin [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 3.8e-120
Identity = 207/230 (90.00%), Postives = 216/230 (93.91%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITAD +SDD ANDTYGK+LGMVFSPVPFQSDFLVSP PEP 
Sbjct: 1   MPSFPPPGSVTICEINRDLITADCLSDDRANDTYGKILGMVFSPVPFQSDFLVSPTPEPK 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NE RNDE NGE IQRK VIASLQGF+E S+ R LRPNDVKYLP EYLQG+SWHQHKHI+A
Sbjct: 61  NEPRNDEVNGEIIQRKGVIASLQGFIEGSVNRLLRPNDVKYLPTEYLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRD+ENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACK GICIWAASF
Sbjct: 121 FISGTNQVVVRDYENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLR+ DEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRSHDEQISALSWSPDGRY 230

[Close]

BLAST of CmaCh14G004870 vs. NCBI nr
Match: gi|1009141892|ref|XP_015888430.1| (PREDICTED: aladin [Ziziphus jujuba])

HSP 1 Score: 332.0 bits (850), Expect = 8.6e-88
Identity = 160/231 (69.26%), Postives = 186/231 (80.52%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           M SFPPPG+VT+CEINR+LITAD +SDD A DTYGK+LGMVFSPV FQ D  V P P P 
Sbjct: 1   MASFPPPGTVTVCEINRELITADTLSDDRARDTYGKLLGMVFSPVAFQLDQPVQP-PSPE 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
            +A      G    RKS I +LQG   DS+KR   PNDV  LP   LQG+SWHQHKHI+A
Sbjct: 61  GDAEGAVTTG----RKSTIGTLQGIFTDSLKRLFHPNDVNLLPEVDLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG+NQV+VRD+E++EGKDPCIL ++ Q+DVKVLEWRPNGGRTLSVAC  GICIWAAS+
Sbjct: 121 FISGSNQVIVRDYEDSEGKDPCILANEYQRDVKVLEWRPNGGRTLSVACNGGICIWAASY 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTR-DEQISALSWSPDGRY 231
           PGNAASVR GA SFLG+ SRGSG+RY LVDFL+++ +EQISALSWSPDGR+
Sbjct: 181 PGNAASVRSGAASFLGTLSRGSGIRYILVDFLKSQNNEQISALSWSPDGRF 226

[Close]

BLAST of CmaCh14G004870 vs. NCBI nr
Match: gi|595803864|ref|XP_007202074.1| (hypothetical protein PRUPE_ppa005975mg [Prunus persica])

HSP 1 Score: 329.7 bits (844), Expect = 4.3e-87
Identity = 161/235 (68.51%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFP PGSV+ICEINRDLITA+ +SDD+A DTYGK+LGMVFSPVPFQSD L  P P P 
Sbjct: 1   MPSFPHPGSVSICEINRDLITAESLSDDVAKDTYGKILGMVFSPVPFQSDQLARP-PSPE 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
            +   D+    +   K ++ +LQG L  S+     PN V  LP   LQG+SWHQHKHI+A
Sbjct: 61  QD---DQQVATTAPTKGLLQTLQGILNRSLTPLFHPNHVNLLPEVDLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG NQV+VRDFE++EGK+PCIL ++ Q++VKVLEWRPNGGR LSVAC  GICIWAASF
Sbjct: 121 FISGPNQVIVRDFEDSEGKEPCILANESQREVKVLEWRPNGGRQLSVACNGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRD-EQISALSWSPDGRYPNKL 235
           PG+AASVR GA SFLG+ SRGSGVRYTLVDFLR+ + EQISALSWSPDGRYPN L
Sbjct: 181 PGSAASVRSGASSFLGTLSRGSGVRYTLVDFLRSHNGEQISALSWSPDGRYPNNL 231

[Close]

BLAST of CmaCh14G004870 vs. NCBI nr
Match: gi|567875761|ref|XP_006430470.1| (hypothetical protein CICLE_v10011725mg [Citrus clementina])

HSP 1 Score: 318.5 bits (815), Expect = 9.8e-84
Identity = 153/231 (66.23%), Postives = 180/231 (77.92%), Query Frame = 1


Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFP PGSVT+CEINRDLITAD +SDD A DTYGKVLGMVF+PVPFQSD L S +P+  
Sbjct: 1   MPSFPRPGSVTVCEINRDLITADNLSDDRAKDTYGKVLGMVFAPVPFQSDELASSSPDTQ 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
              +     GE +      ++L G +  SIK  L P+ V  LP   LQG+SWHQHKHI+A
Sbjct: 61  ESEQRGREEGEGL-----FSTLHGIISHSIKPLLHPDHVHLLPEVDLQGVSWHQHKHIVA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISG+ QV+VRD+E++EGKD CILT D Q+DVKVLEWRPNGGR+LSV CK GICIWA S+
Sbjct: 121 FISGSTQVIVRDYEDSEGKDACILTSDSQRDVKVLEWRPNGGRSLSVGCKGGICIWAPSY 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRD-EQISALSWSPDGRY 231
           PGNAASVR GA SFLG+ SRG G R+TLVDFLR+++ EQI+ALSW PDGRY
Sbjct: 181 PGNAASVRSGAASFLGALSRGPGTRWTLVDFLRSQNGEQITALSWGPDGRY 226

The following BLAST results are available for this feature:

BLAST of CmaCh14G004870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AAAS_ARATH	1.7e-75	61.37	Aladin OS=Arabidopsis thaliana GN=AAAS PE=1 SV=1	[more]

BLAST of CmaCh14G004870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH99_CUCSA	2.7e-120	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G816680 PE=4 SV=1	[more]
M5W213_PRUPE	3.0e-87	68.51	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005975mg PE=4 SV=1	[more]
V4SXF2_9ROSI	6.8e-84	66.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011725mg PE=4 SV=1	[more]
A0A067F1M0_CITSI	8.9e-84	66.23	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0133382mg PE=4 ...	[more]
A0A067EQD9_CITSI	3.8e-82	65.52	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0133382mg PE=4 ...	[more]

BLAST of CmaCh14G004870 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56900.1	9.4e-77	61.37	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of CmaCh14G004870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085037\|ref\|XP_008443209.1\|	2.2e-120	90.87	PREDICTED: aladin [Cucumis melo]	[more]
gi\|778685097\|ref\|XP_011652161.1\|	3.8e-120	90.00	PREDICTED: aladin [Cucumis sativus]	[more]
gi\|1009141892\|ref\|XP_015888430.1\|	8.6e-88	69.26	PREDICTED: aladin [Ziziphus jujuba]	[more]
gi\|595803864\|ref\|XP_007202074.1\|	4.3e-87	68.51	hypothetical protein PRUPE_ppa005975mg [Prunus persica]	[more]
gi\|567875761\|ref\|XP_006430470.1\|	9.8e-84	66.23	hypothetical protein CICLE_v10011725mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005635	nuclear envelope
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G004870.1	CmaCh14G004870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 107..230 score: 3.
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 105..230 score: 2.
None	No IPR available	PANTHER	PTHR14494	ALADIN/ADRACALIN/AAAS	coord: 1..191 score: 2.6E-53coord: 209..230 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G004870	CmoCh14G004940	Cucurbita moschata (Rifu)	cmacmoB244
CmaCh14G004870	Cla97C10G199400	Watermelon (97103) v2	cmawmbB249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G004870	Cucumber (Gy14) v2	cgybcmaB306
CmaCh14G004870	Cucumber (Gy14) v2	cgybcmaB916
CmaCh14G004870	Melon (DHL92) v3.6.1	cmamedB260
CmaCh14G004870	Silver-seed gourd	carcmaB0202
CmaCh14G004870	Silver-seed gourd	carcmaB0343
CmaCh14G004870	Cucumber (Chinese Long) v3	cmacucB0279
CmaCh14G004870	Wax gourd	cmawgoB0293
CmaCh14G004870	Cucurbita maxima (Rimu)	cmacmaB247
CmaCh14G004870	Cucurbita maxima (Rimu)	cmacmaB271
CmaCh14G004870	Cucurbita maxima (Rimu)	cmacmaB286
CmaCh14G004870	Cucumber (Gy14) v1	cgycmaB0926
CmaCh14G004870	Cucurbita moschata (Rifu)	cmacmoB272
CmaCh14G004870	Wild cucumber (PI 183967)	cmacpiB241
CmaCh14G004870	Cucumber (Chinese Long) v2	cmacuB239
CmaCh14G004870	Melon (DHL92) v3.5.1	cmameB229
CmaCh14G004870	Watermelon (Charleston Gray)	cmawcgB222
CmaCh14G004870	Watermelon (97103) v1	cmawmB228
CmaCh14G004870	Cucurbita pepo (Zucchini)	cmacpeB255
CmaCh14G004870	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G004870	Cucurbita pepo (Zucchini)	cmacpeB285
CmaCh14G004870	Cucurbita pepo (Zucchini)	cmacpeB297
CmaCh14G004870	Bottle gourd (USVL1VR-Ls)	cmalsiB229
CmaCh14G004870	Bottle gourd (USVL1VR-Ls)	cmalsiB242