CmaCh14G000220 (gene) Cucurbita maxima (Rimu)

NameCmaCh14G000220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr14 : 95656 .. 96746 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAGTCGTTCGTGGATCACAATGAGGAAGCCCATTTACGGTTCTACCCTTGCAAGCCGCCTGTCGATGCGCACTAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGGGCAAAATACAGCGTTGGTATATGGGCCGAACTTCAAACTGAAAGCGGACCCGTAAACAGAAAAGGCCCAACAAGAATAAGAAAGGCATTGTAGGGTGCCGGTAGGAAAGGCTGTTATTTCCAGAATTGTAACATCAACTTTAAAACACCATAATATTTAAATAAGTTCATAGAGCATCAATCATTTCATTTCCCGCTTCCACTTATTTCTAATCAATGCAAATATTTACTTCGTGTTAAGGAAATTTGCATCTGGAACGATTGGGAAAGGTATTTGGTAATTTACGAGAAGGGTGAGTACAAAACTAATATTCGTTTACCAAACCTAAGGCGAAGCTTTAATGAAAGGGGGAGAGAGAGGGAGAGAGACAAGCGGTCCAATGGAGTGGACCGGGTCCAACAACACAAGGTGGAATGGGGGATTATTGCTTCTGCAATTTGGTTAAAATTCCTTCATTTTTATTCTCTTCTCTCTCCTGCTCTCTTATCTCTCTCTTTCTTATCACAGTTTCTTCGCTGGGACGGACGCCCTCGACCACGGCACCGACGCTTTCCGGACTGATCGGACCATTTCATCTTCTCGACCGAGCCCTTTCTGGTTTTGAATCTCTATTTAATTGGGTTTTCATTCTTATATAATCTATTGCTGCCATGGCTCCCGCATCTGCTACTCTTTGCAATCCCTCAGCTTCCACCGTCTCCATCCCCTGGGATATCTGATTACTCTAACTTATCAATTTCACTGCTTCTGCTGATGTCCGATTCTCGAGGCATTTACGGAGGATTGGGATTCTGTATGCAAGGTTTCAAGATTTTTTTTTTAGCTCCTAGGGTTCTTCAACGTTCTTGAAATTTCTTCATTGCCATTTCAATTGGGAGGGGGATTAGGGTTAGGGTTTTGGGTGGGAGGTTGCCGGAGGCCAAGATCGAGGATTTTCCGTGGTTTTGGGGTTAG

mRNA sequence

ATGTCCAGTCGTTCGTGGATCACAATGAGGAAGCCCATTTACGGTTCTACCCTTGCAAGCCGCCTGTCGATGCGCACTAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGGGCAAAATACAGCGTTGGTATATGGGCCGAACTTCAAACTGAAAGCGGACCCTTTCTTCGCTGGGACGGACGCCCTCGACCACGGCACCGACGCTTTCCGGACTGATCGGACCATTTCATCTTCTCGACCGAGCCCTTTCTGGGTTTTGGGTGGGAGGTTGCCGGAGGCCAAGATCGAGGATTTTCCGTGGTTTTGGGGTTAG

Coding sequence (CDS)

ATGTCCAGTCGTTCGTGGATCACAATGAGGAAGCCCATTTACGGTTCTACCCTTGCAAGCCGCCTGTCGATGCGCACTAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGAAAAGAAGGGCAAAATACAGCGTTGGTATATGGGCCGAACTTCAAACTGAAAGCGGACCCTTTCTTCGCTGGGACGGACGCCCTCGACCACGGCACCGACGCTTTCCGGACTGATCGGACCATTTCATCTTCTCGACCGAGCCCTTTCTGGGTTTTGGGTGGGAGGTTGCCGGAGGCCAAGATCGAGGATTTTCCGTGGTTTTGGGGTTAG

Protein sequence

MSSRSWITMRKPIYGSTLASRLSMRTRKEEKKKRRKEEKKKRRKEGQNTALVYGPNFKLKADPFFAGTDALDHGTDAFRTDRTISSSRPSPFWVLGGRLPEAKIEDFPWFWG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G000220.1CmaCh14G000220.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 27..47
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh14G000220CmoCh14G000180Cucurbita moschata (Rifu)cmacmoB244
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh14G000220Watermelon (97103) v2cmawmbB249
CmaCh14G000220Watermelon (97103) v2cmawmbB259
CmaCh14G000220Wax gourdcmawgoB0290
CmaCh14G000220Wax gourdcmawgoB0354
CmaCh14G000220Cucurbita maxima (Rimu)cmacmaB268
CmaCh14G000220Cucurbita maxima (Rimu)cmacmaB272
CmaCh14G000220Cucurbita maxima (Rimu)cmacmaB274
CmaCh14G000220Cucurbita maxima (Rimu)cmacmaB278
CmaCh14G000220Cucumber (Gy14) v1cgycmaB0496
CmaCh14G000220Cucurbita moschata (Rifu)cmacmoB262
CmaCh14G000220Cucurbita moschata (Rifu)cmacmoB264
CmaCh14G000220Cucurbita moschata (Rifu)cmacmoB268
CmaCh14G000220Wild cucumber (PI 183967)cmacpiB242
CmaCh14G000220Wild cucumber (PI 183967)cmacpiB267
CmaCh14G000220Cucumber (Chinese Long) v2cmacuB240
CmaCh14G000220Cucumber (Chinese Long) v2cmacuB263
CmaCh14G000220Melon (DHL92) v3.5.1cmameB229
CmaCh14G000220Watermelon (Charleston Gray)cmawcgB222
CmaCh14G000220Watermelon (Charleston Gray)cmawcgB230
CmaCh14G000220Watermelon (97103) v1cmawmB228
CmaCh14G000220Watermelon (97103) v1cmawmB246
CmaCh14G000220Cucurbita pepo (Zucchini)cmacpeB256
CmaCh14G000220Cucurbita pepo (Zucchini)cmacpeB283
CmaCh14G000220Cucurbita pepo (Zucchini)cmacpeB296
CmaCh14G000220Bottle gourd (USVL1VR-Ls)cmalsiB231
CmaCh14G000220Bottle gourd (USVL1VR-Ls)cmalsiB242
CmaCh14G000220Cucumber (Gy14) v2cgybcmaB306
CmaCh14G000220Cucumber (Gy14) v2cgybcmaB488
CmaCh14G000220Melon (DHL92) v3.6.1cmamedB260
CmaCh14G000220Silver-seed gourdcarcmaB0203
CmaCh14G000220Silver-seed gourdcarcmaB0940
CmaCh14G000220Silver-seed gourdcarcmaB1380
CmaCh14G000220Cucumber (Chinese Long) v3cmacucB0279
CmaCh14G000220Cucumber (Chinese Long) v3cmacucB0301