CmaCh13G009770 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G009770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDihydroorotate dehydrogenase B (NAD(+)), catalytic subunit
LocationCma_Chr13 : 7608693 .. 7611858 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAATACGTTTATAAATCCAGAAGGAAATTGACGAGGATGATTCTTCATGCCCCACCTTTCCAGCTTTCTTGATCGAATATTACATCTCAGATTGAGTTACCCATCTTCTTCTTCTCCTTCCACATCATTTTTTTGTTCCATTACAGGATTTTCTGTTGCAGAGAGCTTGAATTTCTTGATCCATGGCGTCGTTGGATTTTACCCAGATCAGAACTAGAAACCCAATGTCCGAGCTCGCGCTGAATCGGTCTCGGATGCGTTTGACTCGTCGAAATAGAGTTGGGTTCAGAGTGGTCGCCGCCGGTGAAGGTCAGGCGGAGCCTGATCTCAGTGTGACGGTCAATGGGTTGCACATGCCCAACCCGTTTGTAATTGGGTCGGGTCCGCCGGGAACTAACTATACGGTTATGAAGAGGGCATTTGATGAAGGTTGGGGCGCTGTGATTGCCAAAACTGTAAGTTGTCTCGCTTTTGATTTCGATTTCGTAGTCTGTTGATTCCGTTAGCTTATAATTTGATTTTTGAATGGCAAATTGGTTGCTGTTTGTGTAATCTACTGATCTGTGATTTCATCTTAGAGATTGTTCTTGATTAGGAATATGATTAGTGTTTGGAGAAAGAGATATTTAGATTGATCTTTGTCTGGAAGAACATTACTGGTTCTGCTATCTGTTCTTGATTGGCTGGAAGAACATTACTGGTTTTGCTATCTGTTCTTCATTGGCTGGCATGTACATTTCTTGTATTTTCATGGATCTTTGTCTCTGTTAGGTGTCACTAGATGCAGCAAAAGTAATAAATGTAACGCCTAGATATGCCCGGCTTCGAGCAGATTCAAGCGGCTCTGCAAAAGGGCAGATCATTGGGTGGGAGAACATTGAATTGATAAGCGACAGACCCCTTGAAACTATGTTGAAAGAGTTTAAGCAATTGAAAGAGGAGTATCCTGATAGGATTCTCATTGCTTCAATAATGGAGGAGTATAACAAAGCTGCTTGGGAAGAACTTATAGATCGAGTCGAACAAACCGGAGTTGTATGCCTACGATCTATGCCTTCTTTACCGTGTTTATTACCAAGAACAGTTCATTTCATTGAATGTTTATGTCTCTTACTTAAAGGATGCATTTGAAATCAATTTCTCGTGCCCTCACGGCATGCCCGAACGGAGAATGGGTGCTGCAGTCGGGCAAGATTGTGCGCTACTGGAAGAGGTTTGTGGATGGATAAATGCTAAAGCTACAATCCCTGTCTGGGCTAAAATGACTCCCAATATCACTGACATTTCACAGGTAGTTTTGCTGTTCTTCTATTTGAATGAGTATCTATGGTTGCATGAACTGATGCAACGTACAATTCTTCTTTTGTAAAGCCTGCTAGGGTGGCTCTGAAATTGGGATGCGAGGGGATAGCGGCTATCAATACGATCATGAGTGTAATGGGAATCGATCTCAAGACCTTACGCCCTGAGCCTTGTGTTGAGGGGTTTGCTAATTCGAACTTTTGAACTCGTCGATATAGAATGATTTTGTGTTTATTAGCATTCAGCTGAAATGTTGGATGTGGTTCAATCTGTATGTTGTTAGGTATTCAACTCCAGGAGGCTACTCTTCCAAGGCAGTTCATCCTATTGCTCTTGGTAAAGTGTTGAACATTGCAAAAATGATGAAGGCTGAATTTAATGATGCAGACTACTCTCTTTCTGGCATTGGAGGTGTCGAAACCGGTGGAGATGCTGCCGAGTTTATTCTACTCGGAGCAAACACTGTTCAGGTACAACGAGAAATTTGTAACCGTCCAAGAACGTGTCTGCTAGGGAGTGGTTTCTAAACTCTTATAAAGAATGTTTTGTTCCCTTTTTAAACATATGTGAGATCTCATAATCCCCTCCCGCCTAGGGAGCTAGCATCCTCACTGGCACACCGCCCAATGACTGATTCTGATACCATTTTAACTGCCCAAGTCCACCGCCAGTAGTAATGTCCTCTTTGAGCTTTCTCCTCTGGGTTTCCCCTCAAGGTTTTAAAACGTGTCAGGGAGAGGTTTCCTCACCTTCTACGGGTCGTCCCCTCTCCAACCGATGTAAGATCTTACAATCCCCATTGGGGGCCCAACATCCTTGCTAGCACGCCGCCCGATGACGAGCTCTAGTATGGTAACAGTTCAAGCCCATCGCTAGCAGATATTGTCATATTTGGGTTTTCCCTTCGGGCTTCTCCGGCCTTTCCTTTTTGGGCTTCCCCTCAAGTTTTTAAAACACGTTGGGGGAGAGGTTTCCACAATCTTACAAGGAATGTTTCGTTCCCTAAGATCTTACAAAAAATTTTTCCTCTCCAATCGATGTGAGATCTCACCAAATTATAGCCTATAATTTATGTTGCGAAATCGACTAGTTCATTTAACGAAACTGGTCGTAATGGCTCGGACATCCTTTTGTTTTAGGATATTCCTAATGGTGTACTATACTGCATTGTTGTATGCTGAGGAAGTTGCATTCATATGCAGGTGTGCACGGGAGTGATGATGCATGGTTATGGCCTCGTTAAGAAACTCTGTGCTGAGCTGAAGGACTTCATGAAACTTCACAACTTCTCATCCATCGAAGAGTTCAGAGGGTAAGTTTGGAGTTTGAAATCAATAGCAGTTCTTAATAGAACACGGCTCGATCCCCTCGAACATCGGTCACACTAACGAATTCCGGGTGAAACAGGGCTTCCCTTCCGTACTTCACAACGCACACGGATTTAGTTCGGAGGCAGCGGGAAGCAATCGAGCAGAGAAAAGCTGTGAAGAAGGGTCTGCAATCTGATAAAGATTGGACTGGCGATGGCTTTGTCAAGGAAACTGAGAGTATGGTTTCAAACTGAAGGGCTTAATACAGTACACGAATCAAGCCTTTGCTTTGGCTTGGCAGTAGAAATAACTCAACATGGTGTCTTTGTTACATCCGAGTTAAGTTTCTTTTGTTCTTTCTTTCTCCTTCCCTCGAATAAGTGTATCATTACAGAACAGTTTTAATTTCGTATGATTGTGTATATGTGAAGGGATATTAGCAATATTTCTATTGAAATTCCTTTCCAAGATCAATAATCTTAGAAATTCATAATCAAATCATGTACGAATCTCAACAGAATCCAAAAATAATTCACGAATACTTCAGATATT

mRNA sequence

TTGAATACGTTTATAAATCCAGAAGGAAATTGACGAGGATGATTCTTCATGCCCCACCTTTCCAGCTTTCTTGATCGAATATTACATCTCAGATTGAGTTACCCATCTTCTTCTTCTCCTTCCACATCATTTTTTTGTTCCATTACAGGATTTTCTGTTGCAGAGAGCTTGAATTTCTTGATCCATGGCGTCGTTGGATTTTACCCAGATCAGAACTAGAAACCCAATGTCCGAGCTCGCGCTGAATCGGTCTCGGATGCGTTTGACTCGTCGAAATAGAGTTGGGTTCAGAGTGGTCGCCGCCGGTGAAGGTCAGGCGGAGCCTGATCTCAGTGTGACGGTCAATGGGTTGCACATGCCCAACCCGTTTGTAATTGGGTCGGGTCCGCCGGGAACTAACTATACGGTTATGAAGAGGGCATTTGATGAAGGTTGGGGCGCTGTGATTGCCAAAACTGTGTCACTAGATGCAGCAAAAGTAATAAATGTAACGCCTAGATATGCCCGGCTTCGAGCAGATTCAAGCGGCTCTGCAAAAGGGCAGATCATTGGGTGGGAGAACATTGAATTGATAAGCGACAGACCCCTTGAAACTATGTTGAAAGAGTTTAAGCAATTGAAAGAGGAGTATCCTGATAGGATTCTCATTGCTTCAATAATGGAGGAGTATAACAAAGCTGCTTGGGAAGAACTTATAGATCGAGTCGAACAAACCGGAGTTGATGCATTTGAAATCAATTTCTCGTGCCCTCACGGCATGCCCGAACGGAGAATGGGTGCTGCAGTCGGGCAAGATTGTGCGCTACTGGAAGAGGTTTGTGGATGGATAAATGCTAAAGCTACAATCCCTGTCTGGGCTAAAATGACTCCCAATATCACTGACATTTCACAGCCTGCTAGGGTGGCTCTGAAATTGGGATGCGAGGGGATAGCGGCTATCAATACGATCATGAGTGTAATGGGAATCGATCTCAAGACCTTACGCCCTGAGCCTTGTGTTGAGGGGTATTCAACTCCAGGAGGCTACTCTTCCAAGGCAGTTCATCCTATTGCTCTTGGTAAAGTGTTGAACATTGCAAAAATGATGAAGGCTGAATTTAATGATGCAGACTACTCTCTTTCTGGCATTGGAGGTGTGTGCACGGGAGTGATGATGCATGGTTATGGCCTCGTTAAGAAACTCTGTGCTGAGCTGAAGGACTTCATGAAACTTCACAACTTCTCATCCATCGAAGAGTTCAGAGGGGCTTCCCTTCCGTACTTCACAACGCACACGGATTTAGTTCGGAGGCAGCGGGAAGCAATCGAGCAGAGAAAAGCTGTGAAGAAGGGTCTGCAATCTGATAAAGATTGGACTGGCGATGGCTTTGTCAAGGAAACTGAGAGTATGGTTTCAAACTGAAGGGCTTAATACAGTACACGAATCAAGCCTTTGCTTTGGCTTGGCAGTAGAAATAACTCAACATGGTGTCTTTGTTACATCCGAGTTAAGTTTCTTTTGTTCTTTCTTTCTCCTTCCCTCGAATAAGTGTATCATTACAGAACAGTTTTAATTTCGTATGATTGTGTATATGTGAAGGGATATTAGCAATATTTCTATTGAAATTCCTTTCCAAGATCAATAATCTTAGAAATTCATAATCAAATCATGTACGAATCTCAACAGAATCCAAAAATAATTCACGAATACTTCAGATATT

Coding sequence (CDS)

ATGGCGTCGTTGGATTTTACCCAGATCAGAACTAGAAACCCAATGTCCGAGCTCGCGCTGAATCGGTCTCGGATGCGTTTGACTCGTCGAAATAGAGTTGGGTTCAGAGTGGTCGCCGCCGGTGAAGGTCAGGCGGAGCCTGATCTCAGTGTGACGGTCAATGGGTTGCACATGCCCAACCCGTTTGTAATTGGGTCGGGTCCGCCGGGAACTAACTATACGGTTATGAAGAGGGCATTTGATGAAGGTTGGGGCGCTGTGATTGCCAAAACTGTGTCACTAGATGCAGCAAAAGTAATAAATGTAACGCCTAGATATGCCCGGCTTCGAGCAGATTCAAGCGGCTCTGCAAAAGGGCAGATCATTGGGTGGGAGAACATTGAATTGATAAGCGACAGACCCCTTGAAACTATGTTGAAAGAGTTTAAGCAATTGAAAGAGGAGTATCCTGATAGGATTCTCATTGCTTCAATAATGGAGGAGTATAACAAAGCTGCTTGGGAAGAACTTATAGATCGAGTCGAACAAACCGGAGTTGATGCATTTGAAATCAATTTCTCGTGCCCTCACGGCATGCCCGAACGGAGAATGGGTGCTGCAGTCGGGCAAGATTGTGCGCTACTGGAAGAGGTTTGTGGATGGATAAATGCTAAAGCTACAATCCCTGTCTGGGCTAAAATGACTCCCAATATCACTGACATTTCACAGCCTGCTAGGGTGGCTCTGAAATTGGGATGCGAGGGGATAGCGGCTATCAATACGATCATGAGTGTAATGGGAATCGATCTCAAGACCTTACGCCCTGAGCCTTGTGTTGAGGGGTATTCAACTCCAGGAGGCTACTCTTCCAAGGCAGTTCATCCTATTGCTCTTGGTAAAGTGTTGAACATTGCAAAAATGATGAAGGCTGAATTTAATGATGCAGACTACTCTCTTTCTGGCATTGGAGGTGTGTGCACGGGAGTGATGATGCATGGTTATGGCCTCGTTAAGAAACTCTGTGCTGAGCTGAAGGACTTCATGAAACTTCACAACTTCTCATCCATCGAAGAGTTCAGAGGGGCTTCCCTTCCGTACTTCACAACGCACACGGATTTAGTTCGGAGGCAGCGGGAAGCAATCGAGCAGAGAAAAGCTGTGAAGAAGGGTCTGCAATCTGATAAAGATTGGACTGGCGATGGCTTTGTCAAGGAAACTGAGAGTATGGTTTCAAACTGA

Protein sequence

MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKMMKAEFNDADYSLSGIGGVCTGVMMHGYGLVKKLCAELKDFMKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETESMVSN
Homology
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BLAST of CmaCh13G009770 vs. Swiss-Prot
Match: DPYD_ARATH (Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic OS=Arabidopsis thaliana GN=PYD1 PE=1 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 6.7e-186
Identity = 331/429 (77.16%), Postives = 364/429 (84.85%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRN-----RVGFRVVAAGEGQAEPDLSVTVNG 60
           MAS+ F   R     S+  L+      +RR+     RVG ++ +A E  +EPDLSVTVNG
Sbjct: 1   MASMSFALNRFSGLSSKTTLSADFDPSSRRSFLPPTRVGLKISSAAE--SEPDLSVTVNG 60

Query: 61  LHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSG 120
           L MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR  S+G
Sbjct: 61  LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRTGSNG 120

Query: 121 SAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 180
           SAK  +IGW+NIELISDRPLETMLKEF++LK+EYPDRILIAS+MEEYNK AWEELIDRVE
Sbjct: 121 SAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAWEELIDRVE 180

Query: 181 QTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIS 240
           QTGVDA EINFSCPHGMPERRMGAAVGQDCALL+EVCGWINAKAT+PVWAKMTPNITDI+
Sbjct: 181 QTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVCGWINAKATVPVWAKMTPNITDIT 240

Query: 241 QPARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL 300
           +PARV+LK GCEGIAAINTIMSVMGID+KTLRPEPCVEGYSTPGGYS KAV PIAL KV+
Sbjct: 241 EPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVM 300

Query: 301 NIAKMMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAE 360
           NIAKMMK+EF++ D SLSGIGG                   VCTGVMMHGYG VK LCAE
Sbjct: 301 NIAKMMKSEFSE-DRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAE 360

Query: 361 LKDFMKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFV 406
           LKDFMK HNFS+IEEFRG SL YFTTHTDLV+RQ+EA+EQRKA K+GL+SDKDWTGDGFV
Sbjct: 361 LKDFMKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFV 420

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BLAST of CmaCh13G009770 vs. Swiss-Prot
Match: PREA_ECO57 (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli O157:H7 GN=preA PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.3e-58
Identity = 132/340 (38.82%), Postives = 186/340 (54.71%), Query Frame = 1 

Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           DLS+T  G+  PNPF + S P G  Y +  +A+D GWG V+ KT+    A    V+PR+ 
Sbjct: 7   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 66

Query: 108 RLRADSSGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAW 167
            L  + +G      IG++N+E I++ PLE  L   ++LKE+YPD++LIASIM E N+  W
Sbjct: 67  HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 126

Query: 168 EELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKM 227
           EEL   V++ G D  E NFSCP  M    MG+ VGQ   L+E+ C  +   +T+P+ AKM
Sbjct: 127 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 186

Query: 228 TPNITDISQPARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVH 287
           TPNI D+ + A  A + G +GIAAINT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 187 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 246

Query: 288 PIALGKVLNIAKMMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYG 347
           PIA    L   + M+      D+ +SGIGG                   V TG+M +GY 
Sbjct: 247 PIA----LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 306

Query: 348 LVKKLCAELKDFMKLHNFSSIEEFRGASLPYFTTHTDLVR 369
           +V+ + + L  ++    F S++E  G +        DL R
Sbjct: 307 IVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDR 333

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BLAST of CmaCh13G009770 vs. Swiss-Prot
Match: PREA_ECOLI (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli (strain K12) GN=preA PE=1 SV=3)

HSP 1 Score: 226.5 bits (576), Expect = 5.3e-58
Identity = 132/340 (38.82%), Postives = 186/340 (54.71%), Query Frame = 1 

Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           DLS+T  G+  PNPF + S P G  Y +  +A+D GWG V+ KT+    A    V+PR+ 
Sbjct: 5   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64

Query: 108 RLRADSSGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAW 167
            L  + +G      IG++N+E I++ PLE  L   ++LKE+YPD++LIASIM E N+  W
Sbjct: 65  HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 124

Query: 168 EELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKM 227
           EEL   V++ G D  E NFSCP  M    MG+ VGQ   L+E+ C  +   +T+P+ AKM
Sbjct: 125 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 184

Query: 228 TPNITDISQPARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVH 287
           TPNI D+ + A  A + G +GIAAINT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 185 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 244

Query: 288 PIALGKVLNIAKMMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYG 347
           PIA    L   + M+      D+ +SGIGG                   V TG+M +GY 
Sbjct: 245 PIA----LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 304

Query: 348 LVKKLCAELKDFMKLHNFSSIEEFRGASLPYFTTHTDLVR 369
           +V+ + + L  ++    F S++E  G +        DL R
Sbjct: 305 IVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDR 331

[Close]
BLAST of CmaCh13G009770 vs. Swiss-Prot
Match: PREA_SALTY (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=preA PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-56
Identity = 125/326 (38.34%), Postives = 182/326 (55.83%), Query Frame = 1 

Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           DLSVT  G+  PNPF + S P G  Y +  +A+D GWG ++ KT+    A    V+PR+ 
Sbjct: 5   DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 64

Query: 108 RLRADSSGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAW 167
            L  + +G      IG++N+E I++ PLE  L   ++LK++YPD++LIASIM E N+  W
Sbjct: 65  HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 124

Query: 168 EELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKM 227
           +EL   VE+ G D  E NFSCP  M    MG+ VGQ   L+E+ C  +   +++P+ AKM
Sbjct: 125 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 184

Query: 228 TPNITDISQPARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVH 287
           TPNI D+ + A  A + G +GIA INT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 185 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 244

Query: 288 PIALGKVLNIAKMMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYG 347
           PIA    L   + ++      D+ +SGIGG                   V TG+M +GY 
Sbjct: 245 PIA----LRFIQQLRMHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 304

Query: 348 LVKKLCAELKDFMKLHNFSSIEEFRG 355
           +V+ + + L  ++    F+S++E  G
Sbjct: 305 IVEDMASGLSHYLADQGFASLQEMIG 317

[Close]
BLAST of CmaCh13G009770 vs. Swiss-Prot
Match: DPYD_MOUSE (Dihydropyrimidine dehydrogenase [NADP(+)] OS=Mus musculus GN=Dpyd PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 9.3e-55
Identity = 122/330 (36.97%), Postives = 177/330 (53.64%), Query Frame = 1 

Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           D+SV + GL  PNPF + S  P T+  +++RAF+ GWG  + KT SLD   V NV+PR  
Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591

Query: 108 RLRADSSGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY 167
           R      G+  G + G     + NIELIS++          +LK ++PD ILIASIM  Y
Sbjct: 592 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 651

Query: 168 NKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIP 227
           NK+ W EL    E +G DA E+N SCPHGM ER MG A GQD  L+  +C W+     +P
Sbjct: 652 NKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVP 711

Query: 228 VWAKMTPNITDISQPARVALKLGCEGIAAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 287
            +AK+TPN+TDI   AR A + G +G+ A NT+  +MG+    T  P   +   +T GG 
Sbjct: 712 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGRRTTYGGV 771

Query: 288 SSKAVHPIALGKVLNIAK-------MMKAEFNDAD------YSLSGIGGVCTGVMMHGYG 347
           S  A+ PIAL  V  IA+       +     + A+      +S + +  VC+ +    + 
Sbjct: 772 SGTAIRPIALRAVTAIARALPGFPILATGGIDSAESGLQFLHSGASVLQVCSAIQNQDFT 831

Query: 348 LVKKLCAELKDFMKLHNFSSIEEFRGASLP 359
           +++  C  LK  + L +   + ++ G S P
Sbjct: 832 VIEDYCTGLKALLYLKSIEELADWDGQSPP 855

[Close]
BLAST of CmaCh13G009770 vs. TrEMBL
Match: A0A0A0LTU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042970 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 1.1e-214
Identity = 378/424 (89.15%), Postives = 391/424 (92.22%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60
           MAS + TQ RT++P++ LALN SR  LTR  R+GFRVVA+G  QAEPDLSVTVNGL+MPN
Sbjct: 1   MASFNLTQFRTKSPITNLALNPSRTGLTRPTRLGFRVVASGGAQAEPDLSVTVNGLNMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADS+GSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLE MLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300
           ALK GCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL+IAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDFM 360
           MKAEFND DYSLSGIGG                   VCTGVMMHGYG+VKKLCAEL+DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGVVKKLCAELQDFM 360

Query: 361 KLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 406
           KLHNFSSIE+FRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]
BLAST of CmaCh13G009770 vs. TrEMBL
Match: M5WUB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006144mg PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 3.2e-203
Identity = 355/425 (83.53%), Postives = 381/425 (89.65%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAA-GEGQAEPDLSVTVNGLHMP 60
           MASL FTQIR +NP++E +  R  + LTR +RVGFRV A+  E +AEPDLSVTVNGLHMP
Sbjct: 1   MASLSFTQIRGKNPVAEFSRTRPELGLTRPSRVGFRVFASESEAKAEPDLSVTVNGLHMP 60

Query: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKG 120
           NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKV NVTPRYARLRAD++GS KG
Sbjct: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVKNVTPRYARLRADANGSPKG 120

Query: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGV 180
           QIIGWENIELISDRPLE MLKEFKQLK+EYPDRILIASIMEEYNKA WEELIDRVEQTGV
Sbjct: 121 QIIGWENIELISDRPLEIMLKEFKQLKQEYPDRILIASIMEEYNKAGWEELIDRVEQTGV 180

Query: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPAR 240
           DAFEINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKATIPVWAKMTPN+TDI+QPAR
Sbjct: 181 DAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNVTDITQPAR 240

Query: 241 VALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAK 300
           VAL  GCEG+AAINTIMSVMGI+L TLRPEPCVEGYSTPGGYSSKAVHPIAL KV+NIAK
Sbjct: 241 VALSSGCEGVAAINTIMSVMGINLTTLRPEPCVEGYSTPGGYSSKAVHPIALAKVMNIAK 300

Query: 301 MMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDF 360
           MMK+EF D DYSLSGIGG                   VCTGVMMHGYG+VKKLC+EL+DF
Sbjct: 301 MMKSEFGDKDYSLSGIGGVESGGDAAEFILLGANTVQVCTGVMMHGYGIVKKLCSELQDF 360

Query: 361 MKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 406
           MKLHNFSSIE+FRG SL YFTTHTDLVRRQ+EAI+QRKAV+KGLQSDK+WTGDGFVKETE
Sbjct: 361 MKLHNFSSIEDFRGVSLEYFTTHTDLVRRQQEAIQQRKAVRKGLQSDKEWTGDGFVKETE 420

[Close]
BLAST of CmaCh13G009770 vs. TrEMBL
Match: W9RAZ6_9ROSA (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Morus notabilis GN=L484_019329 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 7.1e-203
Identity = 356/424 (83.96%), Postives = 378/424 (89.15%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60
           MASL FTQI+T+NP++E A    +  L R  RVGFRV+A+ E Q EPDLSVTVNGLHMPN
Sbjct: 1   MASLSFTQIKTKNPVAEFAKAHPKTGLLRSRRVGFRVLAS-ETQKEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR   +GS KGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRVGVNGSPKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
           AFEINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDI+QPARV
Sbjct: 181 AFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDITQPARV 240

Query: 241 ALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300
           AL  GCEG+AAINTIMSVMGI+L  LRPEPCVEGYSTPGGYSSKAVHPIAL KV+NIAKM
Sbjct: 241 ALSSGCEGVAAINTIMSVMGINLNNLRPEPCVEGYSTPGGYSSKAVHPIALAKVMNIAKM 300

Query: 301 MKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDFM 360
           MK+EFND DYSLSGIGG                   VCTGVMMHGYGLVKK+C ELKDFM
Sbjct: 301 MKSEFNDKDYSLSGIGGVETGSDAAEFILLGANTVQVCTGVMMHGYGLVKKICEELKDFM 360

Query: 361 KLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 406
           + HNFSSIE+FRGASL YFTTHTDLVRRQ+EA++QRKAV+KGLQSDKDWTGDGFVKETES
Sbjct: 361 RSHNFSSIEDFRGASLEYFTTHTDLVRRQQEAVKQRKAVRKGLQSDKDWTGDGFVKETES 420

[Close]
BLAST of CmaCh13G009770 vs. TrEMBL
Match: B9N381_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05410g PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 2.4e-198
Identity = 352/427 (82.44%), Postives = 378/427 (88.52%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTR-RNRVGFRVVAAGEGQ--AEPDLSVTVNGLH 60
           MASL  TQIR  N ++E    R R++  R R+++GF  V   +GQ   EPDLSVTVNGLH
Sbjct: 1   MASLSLTQIRGSNSVTEFT--RLRLKTQRGRSKIGFLKVVGSQGQNQGEPDLSVTVNGLH 60

Query: 61  MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSA 120
           MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRA ++GSA
Sbjct: 61  MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANGSA 120

Query: 121 KGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQT 180
           KGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQT
Sbjct: 121 KGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQT 180

Query: 181 GVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQP 240
           G+DA EINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKAT+PVWAKMTPNITDI+QP
Sbjct: 181 GIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDITQP 240

Query: 241 ARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNI 300
           ARV+LK GCEG+AAINTIMSVMGI+LKTLRPEPCVEGYSTPGGYSSKAVHPIALGKV++I
Sbjct: 241 ARVSLKSGCEGVAAINTIMSVMGINLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVMSI 300

Query: 301 AKMMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELK 360
           AKMMK+EF+   YSLSGIGG                   VCTGVMMHGYGLVKKLC ELK
Sbjct: 301 AKMMKSEFDLEQYSLSGIGGVETGSDAAEFILVGANTVQVCTGVMMHGYGLVKKLCDELK 360

Query: 361 DFMKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKE 406
           DFMK+HNFSSIE+FRGASL YFTTH DLVRRQ+EAI+QRKA+KKGLQSDKDWTGDGFVKE
Sbjct: 361 DFMKMHNFSSIEDFRGASLEYFTTHMDLVRRQQEAIQQRKAIKKGLQSDKDWTGDGFVKE 420

[Close]
BLAST of CmaCh13G009770 vs. TrEMBL
Match: Q9ST36_PYRPY (JPR ORF1 protein OS=Pyrus pyrifolia GN=JPR ORF1 PE=2 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 3.1e-198
Identity = 347/425 (81.65%), Postives = 378/425 (88.94%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALN-RSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMP 60
           MAS+ FTQI  +NP++E +   R  +RLTR +RVGFRV A+ E +AEPDLSVTVNGLHMP
Sbjct: 1   MASISFTQIGGKNPVAEFSRRPRPEVRLTRPSRVGFRVFAS-ESKAEPDLSVTVNGLHMP 60

Query: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKG 120
           NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSL+A KV NVTPRYARLR D +GSAKG
Sbjct: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLEADKVKNVTPRYARLRVDGNGSAKG 120

Query: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGV 180
           QIIGWENIELISDRPL+ MLKEFKQLK+EYPDRILIASIMEEYNKA WEELIDRVEQTGV
Sbjct: 121 QIIGWENIELISDRPLDIMLKEFKQLKQEYPDRILIASIMEEYNKAGWEELIDRVEQTGV 180

Query: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPAR 240
           DA EINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKAT+PVWAKMTPNITDI+QPAR
Sbjct: 181 DALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDITQPAR 240

Query: 241 VALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAK 300
           VAL  GCEG++AINTIMSVMGI+L TLRPEPCVEGYSTPGGYS+KAVHPIAL KV+NIAK
Sbjct: 241 VALSSGCEGVSAINTIMSVMGINLTTLRPEPCVEGYSTPGGYSAKAVHPIALAKVMNIAK 300

Query: 301 MMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDF 360
           +MK+EF D DYSLSGIGG                   VCTGVMMHGYG+VKKLC+EL+DF
Sbjct: 301 LMKSEFGDTDYSLSGIGGVESGGDAAEFILLGANTVQVCTGVMMHGYGVVKKLCSELQDF 360

Query: 361 MKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 406
           MK HNFSSIE+FRGASL YFTTHTDLVRRQ+EAI+QRKA++KGLQSDKDWTGDGFVKETE
Sbjct: 361 MKQHNFSSIEDFRGASLEYFTTHTDLVRRQQEAIKQRKAIRKGLQSDKDWTGDGFVKETE 420

[Close]
BLAST of CmaCh13G009770 vs. TAIR10
Match: AT3G17810.1 (AT3G17810.1 pyrimidine 1)

HSP 1 Score: 651.4 bits (1679), Expect = 3.8e-187
Identity = 331/429 (77.16%), Postives = 364/429 (84.85%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRN-----RVGFRVVAAGEGQAEPDLSVTVNG 60
           MAS+ F   R     S+  L+      +RR+     RVG ++ +A E  +EPDLSVTVNG
Sbjct: 1   MASMSFALNRFSGLSSKTTLSADFDPSSRRSFLPPTRVGLKISSAAE--SEPDLSVTVNG 60

Query: 61  LHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSG 120
           L MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR  S+G
Sbjct: 61  LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRTGSNG 120

Query: 121 SAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 180
           SAK  +IGW+NIELISDRPLETMLKEF++LK+EYPDRILIAS+MEEYNK AWEELIDRVE
Sbjct: 121 SAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAWEELIDRVE 180

Query: 181 QTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIS 240
           QTGVDA EINFSCPHGMPERRMGAAVGQDCALL+EVCGWINAKAT+PVWAKMTPNITDI+
Sbjct: 181 QTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVCGWINAKATVPVWAKMTPNITDIT 240

Query: 241 QPARVALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL 300
           +PARV+LK GCEGIAAINTIMSVMGID+KTLRPEPCVEGYSTPGGYS KAV PIAL KV+
Sbjct: 241 EPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVM 300

Query: 301 NIAKMMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAE 360
           NIAKMMK+EF++ D SLSGIGG                   VCTGVMMHGYG VK LCAE
Sbjct: 301 NIAKMMKSEFSE-DRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAE 360

Query: 361 LKDFMKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFV 406
           LKDFMK HNFS+IEEFRG SL YFTTHTDLV+RQ+EA+EQRKA K+GL+SDKDWTGDGFV
Sbjct: 361 LKDFMKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFV 420

[Close]
BLAST of CmaCh13G009770 vs. NCBI nr
Match: gi|659066906|ref|XP_008466752.1| (PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)])

HSP 1 Score: 758.1 bits (1956), Expect = 8.1e-216
Identity = 381/424 (89.86%), Postives = 391/424 (92.22%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60
           MAS + TQ RT+NP+  LALN SR  LTR  R+GFRVVA+GE QAEPDLSVTVNGL+MPN
Sbjct: 1   MASFNLTQFRTKNPIPNLALNPSRTGLTRPTRLGFRVVASGEPQAEPDLSVTVNGLNMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADS+GSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300
           ALK GCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL+IAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDFM 360
           MKAEFND DYSLSGIGG                   VCTGVMMHGYGLVKKLCAEL+DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVEAGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCAELQDFM 360

Query: 361 KLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 406
           KLHNFSSIE+FRGASLPYFTTH DLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHMDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]
BLAST of CmaCh13G009770 vs. NCBI nr
Match: gi|449439483|ref|XP_004137515.1| (PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)])

HSP 1 Score: 753.8 bits (1945), Expect = 1.5e-214
Identity = 378/424 (89.15%), Postives = 391/424 (92.22%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60
           MAS + TQ RT++P++ LALN SR  LTR  R+GFRVVA+G  QAEPDLSVTVNGL+MPN
Sbjct: 1   MASFNLTQFRTKSPITNLALNPSRTGLTRPTRLGFRVVASGGAQAEPDLSVTVNGLNMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADS+GSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLE MLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300
           ALK GCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL+IAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDFM 360
           MKAEFND DYSLSGIGG                   VCTGVMMHGYG+VKKLCAEL+DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGVVKKLCAELQDFM 360

Query: 361 KLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 406
           KLHNFSSIE+FRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]
BLAST of CmaCh13G009770 vs. NCBI nr
Match: gi|595846623|ref|XP_007209166.1| (hypothetical protein PRUPE_ppa006144mg [Prunus persica])

HSP 1 Score: 715.7 bits (1846), Expect = 4.6e-203
Identity = 355/425 (83.53%), Postives = 381/425 (89.65%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAA-GEGQAEPDLSVTVNGLHMP 60
           MASL FTQIR +NP++E +  R  + LTR +RVGFRV A+  E +AEPDLSVTVNGLHMP
Sbjct: 1   MASLSFTQIRGKNPVAEFSRTRPELGLTRPSRVGFRVFASESEAKAEPDLSVTVNGLHMP 60

Query: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKG 120
           NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKV NVTPRYARLRAD++GS KG
Sbjct: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVKNVTPRYARLRADANGSPKG 120

Query: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGV 180
           QIIGWENIELISDRPLE MLKEFKQLK+EYPDRILIASIMEEYNKA WEELIDRVEQTGV
Sbjct: 121 QIIGWENIELISDRPLEIMLKEFKQLKQEYPDRILIASIMEEYNKAGWEELIDRVEQTGV 180

Query: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPAR 240
           DAFEINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKATIPVWAKMTPN+TDI+QPAR
Sbjct: 181 DAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNVTDITQPAR 240

Query: 241 VALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAK 300
           VAL  GCEG+AAINTIMSVMGI+L TLRPEPCVEGYSTPGGYSSKAVHPIAL KV+NIAK
Sbjct: 241 VALSSGCEGVAAINTIMSVMGINLTTLRPEPCVEGYSTPGGYSSKAVHPIALAKVMNIAK 300

Query: 301 MMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDF 360
           MMK+EF D DYSLSGIGG                   VCTGVMMHGYG+VKKLC+EL+DF
Sbjct: 301 MMKSEFGDKDYSLSGIGGVESGGDAAEFILLGANTVQVCTGVMMHGYGIVKKLCSELQDF 360

Query: 361 MKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 406
           MKLHNFSSIE+FRG SL YFTTHTDLVRRQ+EAI+QRKAV+KGLQSDK+WTGDGFVKETE
Sbjct: 361 MKLHNFSSIEDFRGVSLEYFTTHTDLVRRQQEAIQQRKAVRKGLQSDKEWTGDGFVKETE 420

[Close]
BLAST of CmaCh13G009770 vs. NCBI nr
Match: gi|703081628|ref|XP_010091741.1| (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [Morus notabilis])

HSP 1 Score: 714.5 bits (1843), Expect = 1.0e-202
Identity = 356/424 (83.96%), Postives = 378/424 (89.15%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60
           MASL FTQI+T+NP++E A    +  L R  RVGFRV+A+ E Q EPDLSVTVNGLHMPN
Sbjct: 1   MASLSFTQIKTKNPVAEFAKAHPKTGLLRSRRVGFRVLAS-ETQKEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR   +GS KGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRVGVNGSPKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240
           AFEINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDI+QPARV
Sbjct: 181 AFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDITQPARV 240

Query: 241 ALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300
           AL  GCEG+AAINTIMSVMGI+L  LRPEPCVEGYSTPGGYSSKAVHPIAL KV+NIAKM
Sbjct: 241 ALSSGCEGVAAINTIMSVMGINLNNLRPEPCVEGYSTPGGYSSKAVHPIALAKVMNIAKM 300

Query: 301 MKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDFM 360
           MK+EFND DYSLSGIGG                   VCTGVMMHGYGLVKK+C ELKDFM
Sbjct: 301 MKSEFNDKDYSLSGIGGVETGSDAAEFILLGANTVQVCTGVMMHGYGLVKKICEELKDFM 360

Query: 361 KLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 406
           + HNFSSIE+FRGASL YFTTHTDLVRRQ+EA++QRKAV+KGLQSDKDWTGDGFVKETES
Sbjct: 361 RSHNFSSIEDFRGASLEYFTTHTDLVRRQQEAVKQRKAVRKGLQSDKDWTGDGFVKETES 420

[Close]
BLAST of CmaCh13G009770 vs. NCBI nr
Match: gi|645269698|ref|XP_008240117.1| (PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)])

HSP 1 Score: 713.8 bits (1841), Expect = 1.7e-202
Identity = 355/425 (83.53%), Postives = 380/425 (89.41%), Query Frame = 1 

Query: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAA-GEGQAEPDLSVTVNGLHMP 60
           MASL FTQIR +NP++E +  R  + LTR  RVGFRV A+  E +AEPDLSVTVNGLHMP
Sbjct: 1   MASLSFTQIRGKNPVAEFSRTRPELGLTRPYRVGFRVFASESETKAEPDLSVTVNGLHMP 60

Query: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKG 120
           NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKV NVTPRYARLRAD++GS KG
Sbjct: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVKNVTPRYARLRADANGSPKG 120

Query: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGV 180
           QIIGWENIELISDRPLE MLKEFKQLK+EYPDRILIASIMEEYNKA WEELIDRVEQTGV
Sbjct: 121 QIIGWENIELISDRPLEIMLKEFKQLKQEYPDRILIASIMEEYNKAGWEELIDRVEQTGV 180

Query: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPAR 240
           DAFEINFSCPHGMPER+MGAAVGQDCALLEEVCGWINAKATIPVWAKMTPN+TDI+QPAR
Sbjct: 181 DAFEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNVTDITQPAR 240

Query: 241 VALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAK 300
           VAL  GCEG+AAINTIMSVMGI+L TLRPEPCVEGYSTPGGYSSKAVHPIAL KV+NIAK
Sbjct: 241 VALSSGCEGVAAINTIMSVMGINLTTLRPEPCVEGYSTPGGYSSKAVHPIALAKVMNIAK 300

Query: 301 MMKAEFNDADYSLSGIGG-------------------VCTGVMMHGYGLVKKLCAELKDF 360
           MMK+EF D DYSLSGIGG                   VCTGVMMHGYG+VKKLC+EL+DF
Sbjct: 301 MMKSEFGDKDYSLSGIGGVESGGDAAEFILLGANTVQVCTGVMMHGYGMVKKLCSELQDF 360

Query: 361 MKLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 406
           MKLHNFSSIE+FRG SL YFTTHTDLVRRQ+EAI+QRKAV+KGLQSDK+WTGDGFVKETE
Sbjct: 361 MKLHNFSSIEDFRGVSLEYFTTHTDLVRRQQEAIQQRKAVRKGLQSDKEWTGDGFVKETE 420

The following BLAST results are available for this feature:
BLAST of CmaCh13G009770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DPYD_ARATH6.7e-18677.16Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic OS=Arabidopsis thaliana... [more]
PREA_ECO575.3e-5838.82NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli O... [more]
PREA_ECOLI5.3e-5838.82NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli (... [more]
PREA_SALTY2.2e-5638.34NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Salmonella typhimu... [more]
DPYD_MOUSE9.3e-5536.97Dihydropyrimidine dehydrogenase [NADP(+)] OS=Mus musculus GN=Dpyd PE=1 SV=1[more]
BLAST of CmaCh13G009770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTU0_CUCSA1.1e-21489.15Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042970 PE=4 SV=1[more]
M5WUB1_PRUPE3.2e-20383.53Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006144mg PE=4 SV=1[more]
W9RAZ6_9ROSA7.1e-20383.96NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Morus notabilis GN... [more]
B9N381_POPTR2.4e-19882.44Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05410g PE=4 SV=1[more]
Q9ST36_PYRPY3.1e-19881.65JPR ORF1 protein OS=Pyrus pyrifolia GN=JPR ORF1 PE=2 SV=1[more]
BLAST of CmaCh13G009770 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17810.13.8e-18777.16 pyrimidine 1[more]
BLAST of CmaCh13G009770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066906|ref|XP_008466752.1|8.1e-21689.86PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)][more]
gi|449439483|ref|XP_004137515.1|1.5e-21489.15PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)][more]
gi|595846623|ref|XP_007209166.1|4.6e-20383.53hypothetical protein PRUPE_ppa006144mg [Prunus persica][more]
gi|703081628|ref|XP_010091741.1|1.0e-20283.96NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [Morus notabilis][more]
gi|645269698|ref|XP_008240117.1|1.7e-20283.53PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005720Dihydroorotate_DH
IPR013785Aldolase_TIM
Vocabulary: Molecular Function
TermDefinition
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0006212 uracil catabolic process
biological_process GO:0007049 cell cycle
biological_process GO:0045747 positive regulation of Notch signaling pathway
biological_process GO:0006221 pyrimidine nucleotide biosynthetic process
biological_process GO:0006396 RNA processing
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004157 dihydropyrimidinase activity
molecular_function GO:0017113 dihydropyrimidine dehydrogenase (NADP+) activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G009770.1CmaCh13G009770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005720Dihydroorotate dehydrogenase domainPFAMPF01180DHO_dhcoord: 49..321
score: 2.6
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 320..357
score: 6.1E-7coord: 49..319
score: 1.8
NoneNo IPR availablePANTHERPTHR11938FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEcoord: 1..405
score: 1.0E
NoneNo IPR availablePANTHERPTHR11938:SF87DEHYDROGENASE-RELATEDcoord: 1..405
score: 1.0E
NoneNo IPR availableunknownSSF51395FMN-linked oxidoreductasescoord: 43..357
score: 1.43