CmaCh13G009520 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh13G009520
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPectinesterase
LocationCma_Chr13 : 7471802 .. 7475307 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGCAAAAAGGTAATTTTTCCCCACACACCAACTTGAGGGGTCTGCACAGATCTGCAAGAAAAGAAAAGGAAAAGAAAAGAAAAAGAGAGAGAGAAAGGAGGAGTTAGAGATTTTAAGAAGGAGAAGGAGGGAAGGGCTCTCGATCTCAGGTCTCTTATCAGATCTATTCAGAGGATCAAGAGGAGCGGTCTGAGCATTTGGATCGTTCGTTTCAAGTAATTAACGGGTAAGAACGCGAGGTAAGTCTGCGACCTCGTTTGTTTCGCCATAGATCTATAAGTTTCGGATAATTTAGGTCTTAATAATCTAGTTGTAAGGATTTTTCCAATTTTTCGGAGGAATCGTGGCCATAATCGAATTGGAAAATGAAATCGATAATCGTCAACCTCGATAAGAAACTGAATCTTTTCTAATTTTCGATCTCGTTGTCGGTATCAAAAAATGCAAGAAAAATATATCTAGATAGTTCGACTTGAGATCTTGAATTCTCGTGAAGGAATCGAATTCATTCGAGTTACGGATTGAAAGATAGAAAAATCCAAATTAAATAGGTTGGTGTGGAATTCGACTGGAATCTGTAAATGGGATGAACTCAGGCAATCGGCGACGAACACGTGGCGGCCGAACAGGAGGGAGACGCGTACGACTGCGACCCAGAAACCCAAACCGGAAACCGACCCACGGTCCAACCCGAAACCTACTGCCAGTCGCTGCACGCCACGTGTCATGTCCTGAAAAATAGAAGGGTAAATCTGCGTCCACCGAGGTTCGAAGCGTGCCTCTGCCCGGGTTGTGCCGTTTAAAATGATGGGTTAAACATTTGGAGATGGGTTGGGCCGTTTTAAACATTGGGAAAAAAATAAAAAAGTAGATAACAAACCCTAACCTTTTAGTTTCTGCCGCCGCGAGAACGGAAGGAGACGACCCTTTGTCTGGTTCTTCAATCACTTCATCCTCTTTGCCGACAAACCTATGCCTCGTTTGGTAGTAATCACTCGTGTGCATCAAGGTGTTCCTTGGCTCGGTCTCGTTAGTCCTCTCTTCCCAGAATAATGGTTGTGTTACTCTCTGCAGGTTTGTTCGTCTTTCTTTTGCTAGTCTCTGTCTCGCCGGCGTTTATGTCCGACGAGACAAAACCGTTCGTCTTCCACTCTTTTCTCTCTTTGTTTCATAGTTTCTGTCTTTACAGGTGAGGTCTAAGGGTTCGTTGGAGGCTGACGTTTTTGAAGTCGCCGGAGTTTGGGTTACGGTCGCCGTAAAACTTGGTATTCTCCATCTCTGTGTTTGTTGTAAATTATTTGCTAAATTTCGTCTTCCACGCTCTTCTCTCTTCATTTCGTGGTTTCTGTCCTTACAGGTGAAATTCGTGGGAGGCTGTTTTCCAAGTCGCCGGAGTACTCGCCGGAAAACTTCGGTATTCTCCATCTCTGTGTTTGTAACTTCTTTGCTAACTTTCGTCTTCCACTCCTTTCTCTCTTTATTTCGTGGTTTCTGTCGTTACAGGTGAGGCCTAAGGGTTTGGAGACTGACGCATTCGAAGTCGCCGGAGTTTGGGTTACGCTCGCCGGAAAACTTTGGTATTATCCATCTTTTTCAATTTTTCTTTCTTCTCTGTCTGTCTTTGTCTCTTTTGTCTTATGAAAATGACATCTAACCTCTCATTTACAAAAGGTAGATGAGAGTGATGTTTAACTGATTGGGTTTACAAATTGAATTGAGAGTGATGTTTAACTCCTTATTTACAAATGTGAATGGACAGTGACATATAACATTTTCTTTGCTATAAGGAGAAATACACATTATTTCCCCTCTTCCATTTTCCTCTCTTCTCTTTCCTATATAAGTGTAAATTGAAGTGTGTAAGAAACACACCTCAATCTGCACCTCTCAATCTGCTCTCAATCTGCTCTCAATCTGCTCTCAATCTGCTCTCAATCTGCTCTCAATCTGCTCTCAATCCTGCTCTCAATCTCGCTCTCAATCTCGCTCGTTTAAGTTTCAATCTCTGCAACTCCATACGTCTTCAAAATGTCTAGCCTTTTCATCCTCTTCTTTATTACATTTTTTTGTACTACATCCTCCATCCTCCTGTAGTTGCATTTCTTATAATGCAACCGTCTCATTGGACGGGGAGGGAGATTATTTTAGCAGCGGCACCGAATAACAGTAACTCCAGGTTTAACATTCATGTTAAACCTGGAATGTATTTTGAATATATAAAAATCGAATCGTCGAAAACCTTCATTACATTGTGGGGTGATGATGCATCTACCACAACTATAGTAGGTAACCGAAGCCAGGCCACTGGCTTTGGAACATCAGATTCAGCCACCTTTGGTAAGCAGTTTCTAAACATTTGTGAATCTTTCAAAGTTGTCTTCTAAAGAAAACATTATTAAATATATATATATTTTAGAGATAAAAAAAAGGGGTTTAACCATTTTTTAAAATGAGAAGTTAAAGGTTCTCAAGTACGAATTATTTTTTAAAAAAATTAATGAATAATGACCCTATTTGTTTAACTAAATATTAAAATTAGTGTCATGATTTATTTGGAACAATTATTATTGAAATTGATTATAATTGTGTTAATTTGTTTTTAGAATGTCTGTGTTAATTTGTTTTTAGAATGTCTATTTAATGATGTTGATTTCTGTACTTTTAATTTGACAAATTCAAAATTTTTAAAAATTAATTCTTTCTTAAATATAAATATAATTTTTCCCCTCTGTTTTTTTCAATAGATTTATACGATTAAAATATTTAAATATATAAACTTTTTCTTCAAATAATTATTATTAAATATAAATACAATTTTTATATTTAATACTAATAACCACTCTTTATTTTAATAAATTTATAGCATTAAAATATGAAATATATAAATTTACAAGGTAGAGACATTTTTTTTCTTTCAATTTCTCCTTTCAATTTTTATTGGGTTAGATATTAATTTTTTCATTTTAAAGAGATTAAATTTTGTTATTTTTCATTTTCTTATATTATTTCAATTTATTAGAAGTTTGAACTTCTAATAATTATTATTCTCTCTAACTTCGTAGTTGTGGCTGCAAACAACTTTATAGCTATTTCTATTACATTTTCAAATTCGGCTGGAGCTGGACCTAAACACTGCCAAGCAGTCGCTCTCCTAACGAGTGATAATGTAAATTTATTTGGAAACGCTCGTGCTGTTTTTCAGGATTGTAGACTGTTACCGTGACTGCACAGTCTAAAGAGCACCCAGATGATTCCATGACTGCACAGTCTAAAGAGCACCCAGATGATTTGAGTGGCTTTTCGCTTTAGAATTGCAGTGTAATGGCCTCTCTTAAACTTGGGCCAGTAAATGAAACGATTGTATTTCTTGGCCGTCCTTGGAGAGACTATTCCACTGTGGTTTTCATGGAATCGTTTCTAGACTCAGTGGTGAATCCCGCCGGATGGTCAGAATGGTCCAATAGTAGTTCTCTGAAATTATTATTTTATGGAGTATGGCAATAG

mRNA sequence

GGGGCAAAAAGGTAATTTTTCCCCACACACCAACTTGAGGGGTCTGCACAGATCTGCAAGAAAAGAAAAGGAAAAGAAAAGAAAAAGAGAGAGAGAAAGGAGGAGTTAGAGATTTTAAGAAGGAGAAGGAGGGAAGGGCTCTCGATCTCAGGTCTCTTATCAGATCTATTCAGAGGATCAAGAGGAGCGGTCTGAGCATTTGGATCGTTCGTTTCAAGTAATTAACGGGTAAGAACGCGAGGTAAGTCTGCGACCTCGTTTGTTTCGCCATAGATCTATAAGTTTCGGATAATTTAGGTCTTAATAATCTAGTTGTAAGGATTTTTCCAATTTTTCGGAGGAATCGTGGCCATAATCGAATTGGAAAATGAAATCGATAATCGTCAACCTCGATAAGAAACTGAATCTTTTCTAATTTTCGATCTCGTTGTCGGTATCAAAAAATGCAAGAAAAATATATCTAGATAGTTCGACTTGAGATCTTGAATTCTCGTGAAGGAATCGAATTCATTCGAGTTACGGATTGAAAGATAGAAAAATCCAAATTAAATAGGTTGGTGTGGAATTCGACTGGAATCTGTAAATGGGATGAACTCAGGCAATCGGCGACGAACACGTGGCGGCCGAACAGGAGGGAGACGCGTACGACTGCGACCCAGAAACCCAAACCGGAAACCGACCCACGGTCCAACCCGAAACCTACTGCCAGTCGCTGCACGCCACGTGTCATGTCCTGAAAAATAGAAGGGTAAATCTGCGTCCACCGAGGTTCGAAGCGTGCCTCTGCCCGGGTTGTGCCGTTTAAAATGATGGGTTAAACATTTGGAGATGGGTTGGGCCGTTTTAAACATTGGGAAAAAAATAAAAAAGTAGATAACAAACCCTAACCTTTTAGTTTCTGCCGCCGCGAGAACGGAAGGAGACGACCCTTTGTCTGGTTCTTCAATCACTTCATCCTCTTTGCCGACAAACCTATGCCTCGTTTGGTAGTAATCACTCGTGTGCATCAAGGTGTTCCTTGGCTCGGTCTCGTTAGTCCTCTCTTCCCAGAATAATGGTTGTGTTACTCTCTGCAGGTGAGGTGAAATTCGTGGGAGGCTGTTTTCCAAGTCGCCGGAGTACTCGCCGGAAAACTTCGGTGAGGCCTAAGGGTTTGGAGACTGACGCATTCGAAGTCGCCGGAGTTTGGGTTACGCTCGCCGGAAAACTTTGTGTAATGGCCTCTCTTAAACTTGGGCCAGTAAATGAAACGATTGTATTTCTTGGCCGTCCTTGGAGAGACTATTCCACTGTGGTTTTCATGGAATCGTTTCTAGACTCAGTGGTGAATCCCGCCGGATGGTCAGAATGGTCCAATAGTAGTTCTCTGAAATTATTATTTTATGGAGTATGGCAATAG

Coding sequence (CDS)

ATGGTTGTGTTACTCTCTGCAGGTGAGGTGAAATTCGTGGGAGGCTGTTTTCCAAGTCGCCGGAGTACTCGCCGGAAAACTTCGGTGAGGCCTAAGGGTTTGGAGACTGACGCATTCGAAGTCGCCGGAGTTTGGGTTACGCTCGCCGGAAAACTTTGTGTAATGGCCTCTCTTAAACTTGGGCCAGTAAATGAAACGATTGTATTTCTTGGCCGTCCTTGGAGAGACTATTCCACTGTGGTTTTCATGGAATCGTTTCTAGACTCAGTGGTGAATCCCGCCGGATGGTCAGAATGGTCCAATAGTAGTTCTCTGAAATTATTATTTTATGGAGTATGGCAATAG

Protein sequence

MVVLLSAGEVKFVGGCFPSRRSTRRKTSVRPKGLETDAFEVAGVWVTLAGKLCVMASLKLGPVNETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGVWQ
Homology
[Close]
BLAST of CmaCh13G009520 vs. Swiss-Prot
Match: PME1_FICPW (Pectinesterase/pectinesterase inhibitor OS=Ficus pumila var. awkeotsang PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.0e-12
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = 1 

Query: 54  VMASLKLGPVNETIV-FLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGV 113
           + AS  L PV +T   +LGRPW++YS  V MES++  V++PAGW EW    +LK LFYG 
Sbjct: 430 IFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGE 489

Query: 114 WQ 115
           ++
Sbjct: 490 YR 491

[Close]
BLAST of CmaCh13G009520 vs. Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-11
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 1 

Query: 19  SRRSTRRKTSVRPKGLETDAFEVAGVWVTLAGKLCVMASLKLGPVNETI-VFLGRPWRDY 78
           +R+   R  ++  +G  TD  +  G+   +     V A+  L PV  ++  FLGRPW+ Y
Sbjct: 366 ARKPPNRTNTLTAQG-RTDPNQSTGI---IIHNCRVTAASDLKPVQSSVKTFLGRPWKQY 425

Query: 79  STVVFMESFLDSVVNPAGWSEWSNSSSLKLLFY 111
           S  V++++FLDS++NPAGW EWS   +L  L+Y
Sbjct: 426 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYY 454

[Close]
BLAST of CmaCh13G009520 vs. Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-11
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 1 

Query: 54  VMASLKLGPV-NETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           ++AS  L PV  E   +LGRPW++YS  V MES+L  ++NPAGW+EW    +LK L+YG
Sbjct: 431 IIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYG 489

[Close]
BLAST of CmaCh13G009520 vs. Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.0e-11
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1 

Query: 54  VMASLKLGPV-NETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           ++AS  L PV  E   +LGRPW+ YS  V MES+L  ++NPAGW+EW    +LK L+YG
Sbjct: 435 IIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYG 493

[Close]
BLAST of CmaCh13G009520 vs. Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.8e-11
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 1 

Query: 25  RKTSVRPKGLETDAFEVAGVWVTLAGKLCVMASLKLGPVNETIVFLGRPWRDYSTVVFME 84
           +K S+  +G + D  E  G+ +     +   + L+   VN T  +LGRPW+ YS  V M+
Sbjct: 381 QKNSITAQGRK-DPNEPTGISIQFCN-ITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQ 440

Query: 85  SFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           SFL +V+ P GW EW+   +L  LFYG
Sbjct: 441 SFLSNVIRPEGWLEWNGDFALNSLFYG 465

[Close]
BLAST of CmaCh13G009520 vs. TrEMBL
Match: B9RD90_RICCO (Pectinesterase OS=Ricinus communis GN=RCOM_1611040 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.2e-11
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1 

Query: 54  VMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           V A+  L PV  ++  +LGRPW++YS  VFM++FLDS++NPAGW EWS + +L  L+YG
Sbjct: 401 VTAASDLSPVQSSVRTYLGRPWKEYSRTVFMKTFLDSLINPAGWMEWSGNFALDTLYYG 459

[Close]
BLAST of CmaCh13G009520 vs. TrEMBL
Match: A0A0A0KPG9_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_5G167190 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-10
Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 1 

Query: 54  VMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           VMA+  L PV +++  +LGRPW++YS  V+++SF+DS+VNPAGW EWS + +L  L+YG
Sbjct: 407 VMATDDLKPVIKSVRTYLGRPWKEYSRTVYLQSFMDSLVNPAGWLEWSGNFALNTLYYG 465

[Close]
BLAST of CmaCh13G009520 vs. TrEMBL
Match: V9TLK1_TOBAC (Pectinesterase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-10
Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 1 

Query: 18  PSRRSTRRKTSVRPKGLETDAFEVAGVWVTLAGKLCVMASLKLGPV-NETIVFLGRPWRD 77
           P +    +K  V  +G  TD  +  G  +       ++AS  L PV +E   +LGRPW++
Sbjct: 412 PRKPGKNQKNMVTAQG-RTDPNQATGTSIQFCD---IIASPDLEPVKSEYKTYLGRPWKE 471

Query: 78  YSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           YS  V MES+L  +++PAGWSEWS   +LK L+YG
Sbjct: 472 YSRTVVMESYLGDLIDPAGWSEWSGDFALKTLYYG 502

[Close]
BLAST of CmaCh13G009520 vs. TrEMBL
Match: M1BJ45_SOLTU (Pectinesterase OS=Solanum tuberosum GN=PGSC0003DMG400018037 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-10
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 1 

Query: 17  FPSRRSTRRKTSVRPKGLETDAFEVAGVWVTLAGKLCVMASLKLGPVNETI-VFLGRPWR 76
           F  R   ++K ++  +G  TD  +  G+ +  +    VMA+  L PV  T   FLGRPW+
Sbjct: 375 FARRPMDKQKITITAQG-RTDPNQNTGISIHNSR---VMAASDLRPVLGTFKTFLGRPWK 434

Query: 77  DYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGVWQ 115
            YS  VFM+++LDS+V+PAGW EW    +L  L+YG ++
Sbjct: 435 QYSRTVFMKTYLDSLVDPAGWLEWDGDFALSTLYYGEYR 469

[Close]
BLAST of CmaCh13G009520 vs. TrEMBL
Match: V4S7X2_9ROSI (Pectinesterase OS=Citrus clementina GN=CICLE_v10004742mg PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.0e-10
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 54  VMASLKLGPV-NETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGV 113
           VMA+  L PV ++   FLGRPW++YS  V+M+++LDS+V+PAGW EWS + +L  LFYG 
Sbjct: 405 VMAAPDLVPVLSKFKTFLGRPWKEYSRTVYMQTYLDSLVDPAGWLEWSGNFALNTLFYGE 464

Query: 114 WQ 115
           ++
Sbjct: 465 YK 466

[Close]
BLAST of CmaCh13G009520 vs. TAIR10
Match: AT2G45220.1 (AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 67.8 bits (164), Expect = 5.0e-12
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 1 

Query: 54  VMASLKLGPV-NETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGV 113
           V A+  L PV   T  +LGRPWR YS  VFM++ LDS+++P GW EW  + +LK LFY  
Sbjct: 399 VTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAE 458

Query: 114 WQ 115
           +Q
Sbjct: 459 FQ 460

[Close]
BLAST of CmaCh13G009520 vs. TAIR10
Match: AT3G59010.1 (AT3G59010.1 pectin methylesterase 61)

HSP 1 Score: 64.3 bits (155), Expect = 5.5e-11
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 1 

Query: 66  TIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           T  +LGRPW+ YS  V M+SF+D  ++P+GWS WS++ +LK L+YG
Sbjct: 428 TKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYG 473

[Close]
BLAST of CmaCh13G009520 vs. TAIR10
Match: AT2G43050.1 (AT2G43050.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 64.3 bits (155), Expect = 5.5e-11
Identity = 24/47 (51.06%), Postives = 34/47 (72.34%), Query Frame = 1 

Query: 65  ETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           E++ +LGRPW++YS  V M+SF+   ++P+GWS WS    LK LFYG
Sbjct: 415 ESMTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYG 461

[Close]
BLAST of CmaCh13G009520 vs. TAIR10
Match: AT1G11580.1 (AT1G11580.1 methylesterase PCR A)

HSP 1 Score: 63.9 bits (154), Expect = 7.2e-11
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 1 

Query: 51  KLCVMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLF 110
           K  + AS  L PV  ++  FLGRPW+ YS  V M+SF+D+ ++PAGW  W    +L  L+
Sbjct: 441 KCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLY 500

Query: 111 YG 112
           YG
Sbjct: 501 YG 502

[Close]
BLAST of CmaCh13G009520 vs. TAIR10
Match: AT4G02330.1 (AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-10
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 1 

Query: 69  FLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFY 111
           +LGRPW++YS  VFM+S++D VV P GW EW+   +L  L+Y
Sbjct: 475 YLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYY 516

[Close]
BLAST of CmaCh13G009520 vs. NCBI nr
Match: gi|255541230|ref|XP_002511679.1| (PREDICTED: pectinesterase 2 [Ricinus communis])

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-11
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 1 

Query: 54  VMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           V A+  L PV  ++  +LGRPW++YS  VFM++FLDS++NPAGW EWS + +L  L+YG
Sbjct: 401 VTAASDLSPVQSSVRTYLGRPWKEYSRTVFMKTFLDSLINPAGWMEWSGNFALDTLYYG 459

[Close]
BLAST of CmaCh13G009520 vs. NCBI nr
Match: gi|764635340|ref|XP_004307817.2| (PREDICTED: pectinesterase 2-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-11
Identity = 31/62 (50.00%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 54  VMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGV 113
           +MA+  L PV +++  FLGRPW+ YS  VF++S+LDS+V+PAGW EW  + +LK L+YG 
Sbjct: 405 IMAAADLAPVIKSVKTFLGRPWKTYSRTVFLQSYLDSLVDPAGWLEWDGNFALKTLYYGE 464

Query: 114 WQ 115
           ++
Sbjct: 465 YK 466

[Close]
BLAST of CmaCh13G009520 vs. NCBI nr
Match: gi|657945053|ref|XP_008377824.1| (PREDICTED: pectinesterase 2-like [Malus domestica])

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-10
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 1 

Query: 54  VMASLKL-GPVNETIVFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYGV 113
           VMA+L L   V     FLGRPW++YS  VFM+SFLD++V+PAGW +WS   +LK L+YG 
Sbjct: 405 VMAALDLESSVGSVKTFLGRPWKEYSRTVFMQSFLDTLVDPAGWLQWSGDFALKTLYYGE 464

Query: 114 WQ 115
           ++
Sbjct: 465 YK 466

[Close]
BLAST of CmaCh13G009520 vs. NCBI nr
Match: gi|694407901|ref|XP_009378667.1| (PREDICTED: pectinesterase 2-like [Pyrus x bretschneideri])

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1 

Query: 54  VMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           V A+  L PV  ++  +LGRPW+ YS  VFM+++LDS++NPAGW EWS   +LK L+YG
Sbjct: 397 VTAASDLKPVQSSVKTYLGRPWKQYSRTVFMKTYLDSLINPAGWMEWSGDFALKTLYYG 455

[Close]
BLAST of CmaCh13G009520 vs. NCBI nr
Match: gi|657949454|ref|XP_008343201.1| (PREDICTED: pectinesterase 2 [Malus domestica])

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 1 

Query: 54  VMASLKLGPVNETI-VFLGRPWRDYSTVVFMESFLDSVVNPAGWSEWSNSSSLKLLFYG 112
           V A+  L PV  ++  +LGRPW+ YS  VFM+++LDS++NPAGW EWS   +LK L+YG
Sbjct: 398 VTAASDLKPVQSSVKTYLGRPWKQYSRTVFMKTYLDSLINPAGWMEWSGDFALKTLYYG 456

The following BLAST results are available for this feature:
BLAST of CmaCh13G009520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PME1_FICPW8.0e-1248.39Pectinesterase/pectinesterase inhibitor OS=Ficus pumila var. awkeotsang PE=1 SV=... [more]
PME2_CITSI1.0e-1137.63Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1[more]
PME1_SOLLC1.8e-1150.85Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5[more]
PME22_SOLLC4.0e-1150.85Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1[more]
PME_PRUPE6.8e-1137.93Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1[more]
BLAST of CmaCh13G009520 vs. TrEMBL
Match NameE-valueIdentityDescription
B9RD90_RICCO6.2e-1152.54Pectinesterase OS=Ricinus communis GN=RCOM_1611040 PE=4 SV=1[more]
A0A0A0KPG9_CUCSA1.4e-1052.54Pectinesterase OS=Cucumis sativus GN=Csa_5G167190 PE=4 SV=1[more]
V9TLK1_TOBAC1.8e-1040.00Pectinesterase OS=Nicotiana tabacum PE=2 SV=1[more]
M1BJ45_SOLTU2.3e-1039.39Pectinesterase OS=Solanum tuberosum GN=PGSC0003DMG400018037 PE=4 SV=1[more]
V4S7X2_9ROSI4.0e-1051.61Pectinesterase OS=Citrus clementina GN=CICLE_v10004742mg PE=4 SV=1[more]
BLAST of CmaCh13G009520 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45220.15.0e-1250.00 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT3G59010.15.5e-1152.17 pectin methylesterase 61[more]
AT2G43050.15.5e-1151.06 Plant invertase/pectin methylesterase inhibitor superfamily[more]
AT1G11580.17.2e-1145.16 methylesterase PCR A[more]
AT4G02330.12.1e-1052.38 Plant invertase/pectin methylesterase inhibitor superfamily[more]
BLAST of CmaCh13G009520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|255541230|ref|XP_002511679.1|8.9e-1152.54PREDICTED: pectinesterase 2 [Ricinus communis][more]
gi|764635340|ref|XP_004307817.2|8.9e-1150.00PREDICTED: pectinesterase 2-like [Fragaria vesca subsp. vesca][more]
gi|657945053|ref|XP_008377824.1|1.2e-1053.23PREDICTED: pectinesterase 2-like [Malus domestica][more]
gi|694407901|ref|XP_009378667.1|1.5e-1052.54PREDICTED: pectinesterase 2-like [Pyrus x bretschneideri][more]
gi|657949454|ref|XP_008343201.1|1.5e-1052.54PREDICTED: pectinesterase 2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000070Pectinesterase_cat
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0030599pectinesterase activity
Vocabulary: Biological Process
TermDefinition
GO:0042545cell wall modification
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
cellular_component GO:0005618 cell wall
molecular_function GO:0030599 pectinesterase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G009520.1CmaCh13G009520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000070Pectinesterase, catalyticPFAMPF01095Pectinesterasecoord: 55..112
score: 8.0
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 68..111
score: 1.7
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 65..111
score: 7.2
NoneNo IPR availablePANTHERPTHR31707FAMILY NOT NAMEDcoord: 54..111
score: 9.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh13G009520Cp4.1LG20g01740Cucurbita pepo (Zucchini)cmacpeB234
CmaCh13G009520Carg04883Silver-seed gourdcarcmaB0540
CmaCh13G009520Carg07738Silver-seed gourdcarcmaB1393
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh13G009520Cucurbita moschata (Rifu)cmacmoB218
CmaCh13G009520Cucurbita moschata (Rifu)cmacmoB224
CmaCh13G009520Wild cucumber (PI 183967)cmacpiB218
CmaCh13G009520Cucumber (Chinese Long) v2cmacuB217
CmaCh13G009520Melon (DHL92) v3.5.1cmameB193
CmaCh13G009520Watermelon (Charleston Gray)cmawcgB179
CmaCh13G009520Watermelon (97103) v1cmawmB200
CmaCh13G009520Cucurbita pepo (Zucchini)cmacpeB213
CmaCh13G009520Bottle gourd (USVL1VR-Ls)cmalsiB208
CmaCh13G009520Cucumber (Gy14) v2cgybcmaB073
CmaCh13G009520Melon (DHL92) v3.6.1cmamedB214
CmaCh13G009520Silver-seed gourdcarcmaB0690
CmaCh13G009520Cucumber (Chinese Long) v3cmacucB0248
CmaCh13G009520Watermelon (97103) v2cmawmbB207
CmaCh13G009520Wax gourdcmawgoB0266
CmaCh13G009520Cucurbita maxima (Rimu)cmacmaB217
CmaCh13G009520Cucumber (Gy14) v1cgycmaB0317