CmaCh13G008160 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCACGCAGCAGTATTTTCATCCTCACTTCTAACAGCGATTACAGAGCTCTGTTTTTGTGTGTTGCAGTTTGTAGTTGACAATGGATGGAGAGGAGTTGACGGAGCAGGAGACTCAATTGTATGACCGCCAAATTAGGGTTTGGGGTGCGGATGCACAGAAGAGGTATTTTGTAGTGTTGTATGAATTTACGTTATCTTAATTTTCAATGCGACTGTTTTTCAATTGCAAGCTTTGGAAATGTTTTTAATTCTTGCTCGCAGGCTCGGCAAAGCTCACGTTCTAGTTTGTGGAATCAAGGGGACTGTTGCTGAGGTAACATTTTCTTGTGAATTGAGCTGAGTCTTTGCCTTCTATTTTGTTAATATTCAAATTGGGATTCCTTGCAATTGATTAGCGGTGCTTGTTCATCTTTCTCTTTCTCTGTGTTCTTAGTTCTGCAAGAATATTGTTCTTGCTGGGATCGGTAGTTTGACATTGGTGGATAATCGATTGGTGACTGAAGAAGCCCTTTCTGCTAATTTTCTAATTCCCTCTGATGAGGGTGTTTTTGGCGGGAAAACTGTTGCTGAGCTTTGCTGTGATTCTTTTGAAAGATTTCAATCCAATGGTGCGAGTTTCAGCCCTCAAAGGTATTAAATAATGTAGTCGTAGTTATAGACATTACATGTTGTTGAGATCTGTTCTGTCTGCATTTTTGTCATTGATGGTTGTAACAAAATTCCATCCAAGAGCTCTATGTCATTATAATTTGTCACCCCCTGATAAAATTCAACTAAAATTTATGTTGTTCTAGGTGA GCACGCAGCAGTATTTTCATCCTCACTTCTAACAGCGATTACAGAGCTCTGTTTTTGTGTGTTGCAGTTTGTAGTTGACAATGGATGGAGAGGAGTTGACGGAGCAGGAGACTCAATTGTATGACCGCCAAATTAGGGTTTGGGGTGCGGATGCACAGAAGAGGCTCGGCAAAGCTCACGTTCTAGTTTGTGGAATCAAGGGGACTGTTGCTGAGTTCTGCAAGAATATTGTTCTTGCTGGGATCGGTAGTTTGACATTGGTGGATAATCGATTGGTGACTGAAGAAGCCCTTTCTGCTAATTTTCTAATTCCCTCTGATGAGGGTGTTTTTGGCGGGAAAACTGTTGCTGAGCTTTGCTGTGATTCTTTTGAAAGATTTCAATCCAATGGTGCGAGTTTCAGCCCTCAAAGGTGA ATGGATGGAGAGGAGTTGACGGAGCAGGAGACTCAATTGTATGACCGCCAAATTAGGGTTTGGGGTGCGGATGCACAGAAGAGGCTCGGCAAAGCTCACGTTCTAGTTTGTGGAATCAAGGGGACTGTTGCTGAGTTCTGCAAGAATATTGTTCTTGCTGGGATCGGTAGTTTGACATTGGTGGATAATCGATTGGTGACTGAAGAAGCCCTTTCTGCTAATTTTCTAATTCCCTCTGATGAGGGTGTTTTTGGCGGGAAAACTGTTGCTGAGCTTTGCTGTGATTCTTTTGAAAGATTTCAATCCAATGGTGCGAGTTTCAGCCCTCAAAGGTGA MDGEELTEQETQLYDRQIRVWGADAQKRLGKAHVLVCGIKGTVAEFCKNIVLAGIGSLTLVDNRLVTEEALSANFLIPSDEGVFGGKTVAELCCDSFERFQSNGASFSPQR
BLAST of CmaCh13G008160 vs. Swiss-Prot
Match: SAE1A_ARATH (SUMO-activating enzyme subunit 1A OS=Arabidopsis thaliana GN=SAE1A PE=1 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.7e-38 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. Swiss-Prot
Match: SA1B1_ARATH (SUMO-activating enzyme subunit 1B-1 OS=Arabidopsis thaliana GN=SAE1B-1 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.4e-37 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. Swiss-Prot
Match: SA1B2_ARATH (SUMO-activating enzyme subunit 1B-2 OS=Arabidopsis thaliana GN=SAE1B-2 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 2.4e-37 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. Swiss-Prot
Match: SAE1_DANRE (SUMO-activating enzyme subunit 1 OS=Danio rerio GN=sae1 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.1e-16 Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 1
BLAST of CmaCh13G008160 vs. Swiss-Prot
Match: SAE1_DICDI (SUMO-activating enzyme subunit 1 OS=Dictyostelium discoideum GN=sae1 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.0e-15 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TrEMBL
Match: A0A0A0LUF7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G051600 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 9.2e-44 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TrEMBL
Match: V4SQM2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032114mg PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-41 Identity = 81/100 (81.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TrEMBL
Match: A0A067FE41_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020575mg PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-41 Identity = 81/100 (81.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TrEMBL
Match: A0A067FLT9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020575mg PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 7.3e-41 Identity = 81/100 (81.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TrEMBL
Match: W9QCA2_9ROSA (SUMO-activating enzyme subunit 1B OS=Morus notabilis GN=L484_010124 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.6e-40 Identity = 84/100 (84.00%), Postives = 92/100 (92.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TAIR10
Match: AT4G24940.1 (AT4G24940.1 SUMO-activating enzyme 1A) HSP 1 Score: 159.8 bits (403), Expect = 9.4e-40 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TAIR10
Match: AT5G50680.1 (AT5G50680.1 SUMO activating enzyme 1B) HSP 1 Score: 156.0 bits (393), Expect = 1.4e-38 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TAIR10
Match: AT5G50580.2 (AT5G50580.2 SUMO-activating enzyme 1B) HSP 1 Score: 156.0 bits (393), Expect = 1.4e-38 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TAIR10
Match: AT2G30110.1 (AT2G30110.1 ubiquitin-activating enzyme 1) HSP 1 Score: 61.2 bits (147), Expect = 4.6e-10 Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 1
BLAST of CmaCh13G008160 vs. TAIR10
Match: AT5G06460.1 (AT5G06460.1 ubiquitin activating enzyme 2) HSP 1 Score: 57.0 bits (136), Expect = 8.6e-09 Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. NCBI nr
Match: gi|659067531|ref|XP_008439894.1| (PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Cucumis melo]) HSP 1 Score: 185.7 bits (470), Expect = 4.5e-44 Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. NCBI nr
Match: gi|659067533|ref|XP_008439902.1| (PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X2 [Cucumis melo]) HSP 1 Score: 185.7 bits (470), Expect = 4.5e-44 Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. NCBI nr
Match: gi|778658168|ref|XP_011652213.1| (PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 1.3e-43 Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. NCBI nr
Match: gi|1009130204|ref|XP_015882170.1| (PREDICTED: SUMO-activating enzyme subunit 1B-1 [Ziziphus jujuba]) HSP 1 Score: 176.8 bits (447), Expect = 2.1e-41 Identity = 84/100 (84.00%), Postives = 93/100 (93.00%), Query Frame = 1
BLAST of CmaCh13G008160 vs. NCBI nr
Match: gi|641845528|gb|KDO64415.1| (hypothetical protein CISIN_1g020575mg [Citrus sinensis]) HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40 Identity = 81/100 (81.00%), Postives = 93/100 (93.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |