CmaCh13G004080 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAGATTATTATAGACGGTAAAACAGTTCGGTATCAAATAGACATAGAGATAGACACGCGTATGAAAATAAGAAATAAGCATGGCTTAGGTTGAAAATAGTGCAGCAAAGAAGGGGTTATATATATCCCTTCTTCCCTCTCACATTAACTCATATCTCACTTCTGTTCATAAAGAGAAGGCACTGCAATGGACAACAAAGAGAAGGAAGCCAGAGAGAAATTAGGAGGAGAAGTGAAGCTCGGTCATTGCTTGGATGTTATTTTGAAGAATGCTGACGTAGCACTGCACTATCCCTCCTTCCTTAAGCTTTATGACCAACTTGTTGCTGGGATCCTCTTGAACAAGGGAGCTATAGTAAGTGCAACCATATATACTTCAACTCATTTTACTCAGCTTTGTATATCATAACCATATTAAATCAGAATATTGGCTTTCTTTACTTTGAATGCAGAAGTACATCTTTGATAAGAAGTCAAACAGCAACTGGTACTTTATATTTGCAAGAGCTCTCTCAATAGCTTGGATTGAAGATAAGAGATACTGGAAATGGGGATCCTGGTATAATTTTTTAACTAATTTCTCAAGGGGAAAAAATGATAAGAACTTGATTTCCTGATCTCTCTCACTCGGGTGTCTAAACACTTGCAGTGGCGATAGCAACGTTGCAGAGCTTATTGAAGTATCTTGGCTGGACATTCGTGGAAAGATCAACGAGTCTATGCTCTCACAAAATGTTGTGTATGAGGTAGCACTTCAGGTACAGCTGAATAGTAGAGCCTCCGGGTGGAATGCTCCACTGAACATCGAGTTGAAGAAGCCAGATGGGAGCAAGATAGCGCGCCAGGAATGCCTGTTGGGGAAGCCACAAAACCAGTGGTTTGAGATTGTTGTTGAGTTCAAGGTAGGCAACCATGGCTGTGGAAGTAGCGGCGAGATCGAGTTTGCCTTTTTTGAACATGGAGGGCATTGGAAGAGGGGGCTGCTCGTGAAAGGCGTTCGGATTGGAGCAAAGGGATGTGGTTGCGCATGATCGAAATCCTCTCTCTCGAACTCAGACTACACTTATTTTGATTTTGAGAGGCCAGAGTTTGTGTTATGATCCAATATGAAAAGAATGTACTAGCTTGCAAACATAAATAACAGCACCTTTTGCTTACCGGCAATAAGGTCAAGTTTTAAATACATTTTGTTTTAGATACAATAAAATATACGTAATACTACTTTTTTTTTGGTTTACCAATCCGGGTAAGTATAAACACAGCAAACAATTACGTGAAACTCGTATTGGTTCTCATGCTTCACCGACTTTTAGCTTACTAAACGGTAAACATGGTAACAGAGAATCATTTTTTTAGAGGTTAGTTGATAGTTTGTATCTT ATAGATTATTATAGACGGTAAAACAGTTCGGTATCAAATAGACATAGAGATAGACACGCGTATGAAAATAAGAAATAAGCATGGCTTAGGTTGAAAATAGTGCAGCAAAGAAGGGGTTATATATATCCCTTCTTCCCTCTCACATTAACTCATATCTCACTTCTGTTCATAAAGAGAAGGCACTGCAATGGACAACAAAGAGAAGGAAGCCAGAGAGAAATTAGGAGGAGAAGTGAAGCTCGGTCATTGCTTGGATGTTATTTTGAAGAATGCTGACGTAGCACTGCACTATCCCTCCTTCCTTAAGCTTTATGACCAACTTGTTGCTGGGATCCTCTTGAACAAGGGAGCTATAAAGTACATCTTTGATAAGAAGTCAAACAGCAACTGGTACTTTATATTTGCAAGAGCTCTCTCAATAGCTTGGATTGAAGATAAGAGATACTGGAAATGGGGATCCTGTGGCGATAGCAACGTTGCAGAGCTTATTGAAGTATCTTGGCTGGACATTCGTGGAAAGATCAACGAGTCTATGCTCTCACAAAATGTTGTGTATGAGGTAGCACTTCAGGTACAGCTGAATAGTAGAGCCTCCGGGTGGAATGCTCCACTGAACATCGAGTTGAAGAAGCCAGATGGGAGCAAGATAGCGCGCCAGGAATGCCTGTTGGGGAAGCCACAAAACCAGTGGTTTGAGATTGTTGTTGAGTTCAAGGTAGGCAACCATGGCTGTGGAAGTAGCGGCGAGATCGAGTTTGCCTTTTTTGAACATGGAGGGCATTGGAAGAGGGGGCTGCTCGTGAAAGGCGTTCGGATTGGAGCAAAGGGATGTGGTTGCGCATGATCGAAATCCTCTCTCTCGAACTCAGACTACACTTATTTTGATTTTGAGAGGCCAGAGTTTGTGTTATGATCCAATATGAAAAGAATGTACTAGCTTGCAAACATAAATAACAGCACCTTTTGCTTACCGGCAATAAGGTCAAGTTTTAAATACATTTTGTTTTAGATACAATAAAATATACGTAATACTACTTTTTTTTTGGTTTACCAATCCGGGTAAGTATAAACACAGCAAACAATTACGTGAAACTCGTATTGGTTCTCATGCTTCACCGACTTTTAGCTTACTAAACGGTAAACATGGTAACAGAGAATCATTTTTTTAGAGGTTAGTTGATAGTTTGTATCTT ATGGACAACAAAGAGAAGGAAGCCAGAGAGAAATTAGGAGGAGAAGTGAAGCTCGGTCATTGCTTGGATGTTATTTTGAAGAATGCTGACGTAGCACTGCACTATCCCTCCTTCCTTAAGCTTTATGACCAACTTGTTGCTGGGATCCTCTTGAACAAGGGAGCTATAAAGTACATCTTTGATAAGAAGTCAAACAGCAACTGGTACTTTATATTTGCAAGAGCTCTCTCAATAGCTTGGATTGAAGATAAGAGATACTGGAAATGGGGATCCTGTGGCGATAGCAACGTTGCAGAGCTTATTGAAGTATCTTGGCTGGACATTCGTGGAAAGATCAACGAGTCTATGCTCTCACAAAATGTTGTGTATGAGGTAGCACTTCAGGTACAGCTGAATAGTAGAGCCTCCGGGTGGAATGCTCCACTGAACATCGAGTTGAAGAAGCCAGATGGGAGCAAGATAGCGCGCCAGGAATGCCTGTTGGGGAAGCCACAAAACCAGTGGTTTGAGATTGTTGTTGAGTTCAAGGTAGGCAACCATGGCTGTGGAAGTAGCGGCGAGATCGAGTTTGCCTTTTTTGAACATGGAGGGCATTGGAAGAGGGGGCTGCTCGTGAAAGGCGTTCGGATTGGAGCAAAGGGATGTGGTTGCGCATGA MDNKEKEAREKLGGEVKLGHCLDVILKNADVALHYPSFLKLYDQLVAGILLNKGAIKYIFDKKSNSNWYFIFARALSIAWIEDKRYWKWGSCGDSNVAELIEVSWLDIRGKINESMLSQNVVYEVALQVQLNSRASGWNAPLNIELKKPDGSKIARQECLLGKPQNQWFEIVVEFKVGNHGCGSSGEIEFAFFEHGGHWKRGLLVKGVRIGAKGCGCA
BLAST of CmaCh13G004080 vs. Swiss-Prot
Match: LEC_LUFAC (Lectin OS=Luffa acutangula PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.0e-44 Identity = 100/211 (47.39%), Postives = 132/211 (62.56%), Query Frame = 1
BLAST of CmaCh13G004080 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 7.6e-27 Identity = 76/207 (36.71%), Postives = 116/207 (56.04%), Query Frame = 1
BLAST of CmaCh13G004080 vs. Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-18 Identity = 60/156 (38.46%), Postives = 77/156 (49.36%), Query Frame = 1
BLAST of CmaCh13G004080 vs. Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14 Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = 1
BLAST of CmaCh13G004080 vs. Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.2e-13 Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TrEMBL
Match: Q42383_CUCMA (Dimeric phloem specific lectin PP2 OS=Cucurbita maxima GN=PP2 PE=2 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 1.4e-125 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TrEMBL
Match: Q8LK66_9ROSI (Phloem protein 2 OS=Cucurbita digitata GN=PP2 PE=2 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 2.3e-123 Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TrEMBL
Match: Q7DLM2_CUCMA (PP2 lectin polypeptide OS=Cucurbita maxima PE=2 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 1.4e-120 Identity = 209/218 (95.87%), Postives = 214/218 (98.17%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TrEMBL
Match: Q9LLT3_CUCMO (Phloem protein 2 OS=Cucurbita moschata GN=pp2 PE=2 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 1.2e-116 Identity = 202/218 (92.66%), Postives = 211/218 (96.79%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TrEMBL
Match: Q8LK67_9ROSI (Phloem lectin OS=Cucurbita argyrosperma subsp. sororia GN=PP2 PE=2 SV=1) HSP 1 Score: 420.2 bits (1079), Expect = 1.5e-114 Identity = 199/218 (91.28%), Postives = 210/218 (96.33%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1) HSP 1 Score: 122.1 bits (305), Expect = 4.3e-28 Identity = 76/207 (36.71%), Postives = 116/207 (56.04%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TAIR10
Match: AT1G33920.1 (AT1G33920.1 phloem protein 2-A4) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-19 Identity = 60/156 (38.46%), Postives = 77/156 (49.36%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TAIR10
Match: AT1G80110.1 (AT1G80110.1 phloem protein 2-B11) HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15 Identity = 60/196 (30.61%), Postives = 93/196 (47.45%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TAIR10
Match: AT4G19850.2 (AT4G19850.2 lectin-related) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 1
BLAST of CmaCh13G004080 vs. TAIR10
Match: AT1G65390.1 (AT1G65390.1 phloem protein 2 A5) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14 Identity = 53/162 (32.72%), Postives = 75/162 (46.30%), Query Frame = 1
BLAST of CmaCh13G004080 vs. NCBI nr
Match: gi|18069|emb|CAA78979.1| (dimeric phloem specific lectin PP2 [Cucurbita maxima]) HSP 1 Score: 456.8 bits (1174), Expect = 2.1e-125 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of CmaCh13G004080 vs. NCBI nr
Match: gi|21952274|gb|AAM82559.1|AF520583_1 (phloem protein 2 [Cucurbita digitata]) HSP 1 Score: 449.5 bits (1155), Expect = 3.3e-123 Identity = 215/218 (98.62%), Postives = 216/218 (99.08%), Query Frame = 1
BLAST of CmaCh13G004080 vs. NCBI nr
Match: gi|410437|emb|CAA80364.1| (PP2 lectin polypeptide [Cucurbita maxima]) HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-120 Identity = 209/218 (95.87%), Postives = 214/218 (98.17%), Query Frame = 1
BLAST of CmaCh13G004080 vs. NCBI nr
Match: gi|8307830|gb|AAF74345.1|AF150627_1 (phloem protein 2 [Cucurbita moschata]) HSP 1 Score: 427.2 bits (1097), Expect = 1.8e-116 Identity = 202/218 (92.66%), Postives = 211/218 (96.79%), Query Frame = 1
BLAST of CmaCh13G004080 vs. NCBI nr
Match: gi|21952272|gb|AAM82558.1|AF520582_1 (phloem lectin [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 420.2 bits (1079), Expect = 2.1e-114 Identity = 199/218 (91.28%), Postives = 210/218 (96.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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