CmaCh13G003740 (gene) Cucurbita maxima (Rimu)

NameCmaCh13G003740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionInositol-phosphate phosphatase
LocationCma_Chr13 : 4343082 .. 4343577 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGATTCCTGTGCACTGAACCTCTACAGTGTAGCCTGTGGAAGGATTGATTTATTTTTCGGAACCAGTTTTGGAGGTCCTTGGTATGATATATAAACTACCTGTCCATTGCTAATCAGAGACATCACACTTACACTACACTAATCATTCAGGGATGTCGCGGGCGGTGCTGTTATCGTCACAGAAGCTGGTGCGCTCGTGTTTGATCCGTAAGTAGCAAGAACTAGAGTCGAGTCAAGTCTGTTACTCTTTTGAACTCTACTCTAATGAGCTAACCATTTTGTAACTGAAATACAAAAGAAAAAAGCTTTTATCTATCTGTGAATGCCCGTGTAACCGATTTGTTTTCTTGCTTAGGAAATTTAGAAACTTGGTTTTTATGGATATTGATTGTAATGTCAGCTCTGGCAAGGAGTTTGACGTAACATCTCAAAGGGTAGCAGCTTCCAACCCTCTTCTAAGGGATGCATTTGTGGAGGCTTTGGAGATTTAA

mRNA sequence

ATGAATGATTCCTGTGCACTGAACCTCTACAGTGTAGCCTGTGGAAGGATTGATTTATTTTTCGGAACCAGTTTTGGAGGTCCTTGGGATGTCGCGGGCGGTGCTGTTATCGTCACAGAAGCTGGTGCGCTCGTGTTTGATCCCTCTGGCAAGGAGTTTGACGTAACATCTCAAAGGGTAGCAGCTTCCAACCCTCTTCTAAGGGATGCATTTGTGGAGGCTTTGGAGATTTAA

Coding sequence (CDS)

ATGAATGATTCCTGTGCACTGAACCTCTACAGTGTAGCCTGTGGAAGGATTGATTTATTTTTCGGAACCAGTTTTGGAGGTCCTTGGGATGTCGCGGGCGGTGCTGTTATCGTCACAGAAGCTGGTGCGCTCGTGTTTGATCCCTCTGGCAAGGAGTTTGACGTAACATCTCAAAGGGTAGCAGCTTCCAACCCTCTTCTAAGGGATGCATTTGTGGAGGCTTTGGAGATTTAA

Protein sequence

MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRVAASNPLLRDAFVEALEI
BLAST of CmaCh13G003740 vs. Swiss-Prot
Match: IMP1_SOLLC (Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 9.5e-25
Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M  SCAL+L  VACGR++LF+   +GGPWDVAGGAVIV EAG ++FDPSG EFD+TSQRV
Sbjct: 192 MCGSCALDLCWVACGRLELFYLIGYGGPWDVAGGAVIVKEAGGVLFDPSGSEFDITSQRV 251

Query: 61  AASNPLLRDAFVEALEI 78
           AA+NP L++AFVEAL++
Sbjct: 252 AATNPHLKEAFVEALQL 268

BLAST of CmaCh13G003740 vs. Swiss-Prot
Match: IMP3_SOLLC (Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-24
Identity = 53/75 (70.67%), Postives = 62/75 (82.67%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M  SCALNL  VACGR+DLF+   FGGPWDVAGGAVIV EAG  VFDPSG EFD+T++RV
Sbjct: 192 MCGSCALNLCGVACGRLDLFYELEFGGPWDVAGGAVIVKEAGGFVFDPSGSEFDLTARRV 251

Query: 61  AASNPLLRDAFVEAL 76
           AA+N  L+DAF++AL
Sbjct: 252 AATNAHLKDAFIKAL 266

BLAST of CmaCh13G003740 vs. Swiss-Prot
Match: IMP2_SOLLC (Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-23
Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  VACGR+DLF+   FGGPWDVA GA+IV EAG LV DPSG EFD+T++RV
Sbjct: 187 MSGSCALNLCGVACGRLDLFYEIEFGGPWDVAAGALIVIEAGGLVLDPSGSEFDLTARRV 246

Query: 61  AASNPLLRDAFVEAL 76
           AA+N  L+DAF+ AL
Sbjct: 247 AATNAHLKDAFINAL 261

BLAST of CmaCh13G003740 vs. Swiss-Prot
Match: VTC4_ARATH (Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-23
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCAL+L  VACGR+D+F+   FGGPWD+A G VIV EAG L+FDPSGK+ D+TSQR+
Sbjct: 192 MSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVKEAGGLIFDPSGKDLDITSQRI 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASN  L++ F EAL +
Sbjct: 252 AASNASLKELFAEALRL 268

BLAST of CmaCh13G003740 vs. Swiss-Prot
Match: IMPP_MESCR (Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-21
Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M  SCAL+L  +ACGR DL +   +GG WDV  G VIV EAG ++FDPSGK+FD+T  R+
Sbjct: 192 MAGSCALDLCGIACGRADLMYENGYGGAWDVTAGIVIVEEAGGVIFDPSGKDFDITVTRI 251

Query: 61  AASNPLLRDAFVEALE 77
           AASNPL++D+FVEA +
Sbjct: 252 AASNPLIKDSFVEAFK 267

BLAST of CmaCh13G003740 vs. TrEMBL
Match: A0A0K0VPZ1_CUCMO (Inositol monophosphatase-like protein OS=Cucurbita moschata GN=IMP PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-30
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  VACGRIDLFF T FGGPWDVAGGAVIVTEAG LVFDPSGKEFDVTSQRV
Sbjct: 192 MSGSCALNLCGVACGRIDLFFETGFGGPWDVAGGAVIVTEAGGLVFDPSGKEFDVTSQRV 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASNPLL+DAFVEALE+
Sbjct: 252 AASNPLLKDAFVEALEL 268

BLAST of CmaCh13G003740 vs. TrEMBL
Match: A0A0A0LVT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181570 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-28
Identity = 61/77 (79.22%), Postives = 70/77 (90.91%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  VACGRID+FF T FGGPWDVAGGAVIVTEAG L+FDPSGK+FD+TSQRV
Sbjct: 192 MSGSCALNLCGVACGRIDIFFETGFGGPWDVAGGAVIVTEAGGLMFDPSGKDFDITSQRV 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASNPL++DAFVE L++
Sbjct: 252 AASNPLIKDAFVEVLKL 268

BLAST of CmaCh13G003740 vs. TrEMBL
Match: W9RJH3_9ROSA (Inositol monophosphatase 3 OS=Morus notabilis GN=L484_004271 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-27
Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  +ACGR+DLF+   FGGPWDVAGGAVIV EAG LV+DPSGKEFD+TSQRV
Sbjct: 293 MSGSCALNLCGIACGRLDLFYELGFGGPWDVAGGAVIVKEAGGLVYDPSGKEFDITSQRV 352

Query: 61  AASNPLLRDAFVEALE 77
           AASNPLL+DAFVEAL+
Sbjct: 353 AASNPLLKDAFVEALK 368

BLAST of CmaCh13G003740 vs. TrEMBL
Match: B9HCU6_POPTR (Inositol-1-monophosphatase family protein OS=Populus trichocarpa GN=POPTR_0006s01600g PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-27
Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  +ACGRIDLF+ T +GGPWDVAGGAVIV EAG LV+DPSGK+FD+TSQRV
Sbjct: 192 MSGSCALNLCGIACGRIDLFYETGYGGPWDVAGGAVIVKEAGGLVYDPSGKDFDITSQRV 251

Query: 61  AASNPLLRDAFVEALE 77
           AASNPLL+DAFVE L+
Sbjct: 252 AASNPLLKDAFVEVLQ 267

BLAST of CmaCh13G003740 vs. TrEMBL
Match: A9PIC5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-27
Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  +ACGRIDLF+ T +GGPWDVAGGAVIV EAG LV+DPSGK+FD+TSQRV
Sbjct: 192 MSGSCALNLCGIACGRIDLFYETGYGGPWDVAGGAVIVKEAGGLVYDPSGKDFDITSQRV 251

Query: 61  AASNPLLRDAFVEALE 77
           AASNPLL+DAFVE L+
Sbjct: 252 AASNPLLKDAFVEVLQ 267

BLAST of CmaCh13G003740 vs. TAIR10
Match: AT3G02870.1 (AT3G02870.1 Inositol monophosphatase family protein)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-24
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCAL+L  VACGR+D+F+   FGGPWD+A G VIV EAG L+FDPSGK+ D+TSQR+
Sbjct: 192 MSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVKEAGGLIFDPSGKDLDITSQRI 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASN  L++ F EAL +
Sbjct: 252 AASNASLKELFAEALRL 268

BLAST of CmaCh13G003740 vs. NCBI nr
Match: gi|902818727|gb|AKS12205.1| (inositol monophosphatase-like protein [Cucurbita moschata])

HSP 1 Score: 139.4 bits (350), Expect = 2.6e-30
Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  VACGRIDLFF T FGGPWDVAGGAVIVTEAG LVFDPSGKEFDVTSQRV
Sbjct: 192 MSGSCALNLCGVACGRIDLFFETGFGGPWDVAGGAVIVTEAGGLVFDPSGKEFDVTSQRV 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASNPLL+DAFVEALE+
Sbjct: 252 AASNPLLKDAFVEALEL 268

BLAST of CmaCh13G003740 vs. NCBI nr
Match: gi|659127276|ref|XP_008463619.1| (PREDICTED: inositol monophosphatase [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 1.9e-28
Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  VACGRID+FF T FGGPWDVAGGAVIVTEAG LVFDPSGK+FD+TSQRV
Sbjct: 192 MSGSCALNLCGVACGRIDIFFETGFGGPWDVAGGAVIVTEAGGLVFDPSGKDFDITSQRV 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASNPL++DAFVE L++
Sbjct: 252 AASNPLIKDAFVEVLKL 268

BLAST of CmaCh13G003740 vs. NCBI nr
Match: gi|449443542|ref|XP_004139536.1| (PREDICTED: inositol monophosphatase [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 4.1e-28
Identity = 61/77 (79.22%), Postives = 70/77 (90.91%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  VACGRID+FF T FGGPWDVAGGAVIVTEAG L+FDPSGK+FD+TSQRV
Sbjct: 192 MSGSCALNLCGVACGRIDIFFETGFGGPWDVAGGAVIVTEAGGLMFDPSGKDFDITSQRV 251

Query: 61  AASNPLLRDAFVEALEI 78
           AASNPL++DAFVE L++
Sbjct: 252 AASNPLIKDAFVEVLKL 268

BLAST of CmaCh13G003740 vs. NCBI nr
Match: gi|703092663|ref|XP_010094694.1| (Inositol monophosphatase 3 [Morus notabilis])

HSP 1 Score: 128.6 bits (322), Expect = 4.6e-27
Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  +ACGR+DLF+   FGGPWDVAGGAVIV EAG LV+DPSGKEFD+TSQRV
Sbjct: 293 MSGSCALNLCGIACGRLDLFYELGFGGPWDVAGGAVIVKEAGGLVYDPSGKEFDITSQRV 352

Query: 61  AASNPLLRDAFVEALE 77
           AASNPLL+DAFVEAL+
Sbjct: 353 AASNPLLKDAFVEALK 368

BLAST of CmaCh13G003740 vs. NCBI nr
Match: gi|118488632|gb|ABK96128.1| (unknown [Populus trichocarpa])

HSP 1 Score: 128.3 bits (321), Expect = 6.0e-27
Identity = 59/76 (77.63%), Postives = 68/76 (89.47%), Query Frame = 1

Query: 1   MNDSCALNLYSVACGRIDLFFGTSFGGPWDVAGGAVIVTEAGALVFDPSGKEFDVTSQRV 60
           M+ SCALNL  +ACGRIDLF+ T +GGPWDVAGGAVIV EAG LV+DPSGK+FD+TSQRV
Sbjct: 192 MSGSCALNLCGIACGRIDLFYETGYGGPWDVAGGAVIVKEAGGLVYDPSGKDFDITSQRV 251

Query: 61  AASNPLLRDAFVEALE 77
           AASNPLL+DAFVE L+
Sbjct: 252 AASNPLLKDAFVEVLQ 267

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
IMP1_SOLLC9.5e-2568.83Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=1 SV=1[more]
IMP3_SOLLC2.1e-2470.67Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=1 SV=1[more]
IMP2_SOLLC1.8e-2368.00Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=1 SV=1[more]
VTC4_ARATH2.3e-2362.34Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1[more]
IMPP_MESCR2.2e-2159.21Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0K0VPZ1_CUCMO1.8e-3088.31Inositol monophosphatase-like protein OS=Cucurbita moschata GN=IMP PE=2 SV=1[more]
A0A0A0LVT1_CUCSA2.9e-2879.22Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181570 PE=4 SV=1[more]
W9RJH3_9ROSA3.2e-2778.95Inositol monophosphatase 3 OS=Morus notabilis GN=L484_004271 PE=4 SV=1[more]
B9HCU6_POPTR4.2e-2777.63Inositol-1-monophosphatase family protein OS=Populus trichocarpa GN=POPTR_0006s0... [more]
A9PIC5_POPTR4.2e-2777.63Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT3G02870.11.3e-2462.34 Inositol monophosphatase family protein[more]
Match NameE-valueIdentityDescription
gi|902818727|gb|AKS12205.1|2.6e-3088.31inositol monophosphatase-like protein [Cucurbita moschata][more]
gi|659127276|ref|XP_008463619.1|1.9e-2880.52PREDICTED: inositol monophosphatase [Cucumis melo][more]
gi|449443542|ref|XP_004139536.1|4.1e-2879.22PREDICTED: inositol monophosphatase [Cucumis sativus][more]
gi|703092663|ref|XP_010094694.1|4.6e-2778.95Inositol monophosphatase 3 [Morus notabilis][more]
gi|118488632|gb|ABK96128.1|6.0e-2777.63unknown [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000760Inositol_monophosphatase-like
IPR020550Inositol_monophosphatase_CS
Vocabulary: Biological Process
TermDefinition
GO:0046854phosphatidylinositol phosphorylation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046854 phosphatidylinositol phosphorylation
biological_process GO:0046855 inositol phosphate dephosphorylation
biological_process GO:0080167 response to karrikin
biological_process GO:0009409 response to cold
biological_process GO:0019853 L-ascorbic acid biosynthetic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0007165 signal transduction
biological_process GO:0019872 streptomycin biosynthetic process
biological_process GO:0006021 inositol biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
molecular_function GO:0052833 inositol monophosphate 4-phosphatase activity
molecular_function GO:0052832 inositol monophosphate 3-phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008934 inositol monophosphate 1-phosphatase activity
molecular_function GO:0010347 L-galactose-1-phosphate phosphatase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G003740.1CmaCh13G003740.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000760Inositol monophosphatasePANTHERPTHR20854INOSITOL MONOPHOSPHATASEcoord: 4..76
score: 3.0
IPR000760Inositol monophosphatasePFAMPF00459Inositol_Pcoord: 4..73
score: 2.3
IPR020550Inositol monophosphatase, conserved sitePROSITEPS00630IMP_2coord: 29..43
scor
NoneNo IPR availableGENE3DG3DSA:3.40.190.80coord: 3..76
score: 6.5
NoneNo IPR availablePANTHERPTHR20854:SF4INOSITOL MONOPHOSPHATASE TTX-7coord: 4..76
score: 3.0
NoneNo IPR availableunknownSSF56655Carbohydrate phosphatasecoord: 3..75
score: 1.13

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh13G003740CmaCh18G005960Cucurbita maxima (Rimu)cmacmaB212
CmaCh13G003740CmaCh03G005750Cucurbita maxima (Rimu)cmacmaB233