CmaCh13G003380 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G003380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Mitochondrial transcription termination factor family protein, putative
Location	Cma_Chr13 : 3906122 .. 3914187 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGAAGAAGTGGCCTCGATAGATTTAAGAAGGCTCAGACCTTGGAACCGTTCTCTGTAACTGTCAATTCTACTTCACATGACTCTGCTCAATCTTCTGGCAAAGAAGGCATTCAACCACTCGTTCAATATTCACAATCAAGATCTTCGCACTTTCAATCCATTGACCAACATCAATCCCATGATTCAAAAAAACTAACTGGACCTGAAGCAGGACCATTAGTGGGGCAGACTCAGCAATCAACTCAGGTTGGAGGAAGTCAGTCCACTTGGCAGCCTCCTGACTGGGCAATTGAACCACGTGCCGGAGTTTATTATCTTGAAGTCTTAAAGGATGGTGAGGTTATAGATCGAATTAATCTGGACAGGCGGAGACACATTTTTGGGAGACAATTCCATACTTGCGATTTTGTGCTTGATCACCAGTCTGTATCACGCCAACATGCTGCTGTTATTCCTCATAAGAATGGAAGGTTGGATGTTTGTTTTCTTGACAATAATATCATTTTATTTGTTTTATTTCCTAATTTTTAACCCATTACTAGTCCTTTTTGAATCTTATTGCAGGTTACAGGTTATTTATATATAAAGTATTTTTCTCTAGAATTTGAATTAATTGTAAATATTCTTGATACATTGTGATATTCATGTTCTCATCATTGACACAATGACAAACCTACATTAGGGTAGTTATAATTTATAATTAGCGATTTTGTTGAGTGAAGATGATTAATAATTATAAATAGAGTAACATTTCCCCTTTTCATTTTTTTTTTTTTGGGGTGCGTTGGTGTAGCCTGTAAGGAGGGTCACTCATAAGGTTGTAGAAGAATTGGTAAAAGAAATAATCATGTCAAAGAAATTCAAACTCTTGTAGTTTGATGATTGCCTCTAAAATCACATTGGAATATAGGCACGATGGCTAAAAGATGGAAAAATGTTGTTAAAGGAGTCAATGAACATCGGAGCAAGGGTGATTGGATATCTGGGAATAAACTTCAACTGGGATCTTATGGACTCACAAGAGCGAAGATGCTATTGGAGAACGAACCACTTTTATTAAGAAAAAGAGTGAAATCCAAGGAGTTCATAAAACAAATGGAGGAAGGAATGGTCATAGTTGCAAGATTGGTAGTGTCTGTCACCAAAGTGCTTAGATTTTGGTGAGTAGAGAGAAGATGGAAATGCTCCCTTGTGTTTTTTGTGATCAAAGAAGTGAGCAGATAACGTGGTTCCATTCCACCACATTAGCACAACCAGTGTAGAAACTATATAACTCAGTTACTTGATGCTAGCAACAAAAATTAAGGCTCTAACTTCACTTGAAATATAAGATTTAGGCGTGATAGGGGGTGTGCATCCAATCCATAAATGAAAACATGTTACTACAATTTCTTTCAACTATTCTTTCTTCCATGTTTAGAATAAAACTAAGCTGTTTGCAGTGTGATCCACTTGGCTGGTGAGTCTCTAGCGACTAAAATGTGATAAAACCAATGGGCTTACTCAGCAGATTTGGGATCATTAACAAACACACATCTTGTTTTTGTGAGTTCCTATAAAGACCTCCATGGAATGAGGTGGCGCCTACATATTTGTAGGGGGTCTAATTAAATTGGCCATTGGTATTGATTTTAATCGGCAACCCTTTTGTAGCTAAAGTTGTGGAGTTTGGGTCTGTTTGGGGAGGAATTTTTTGCTGGATTTTGTAAGTAGTTTCCGTCCATGGCCTTCATGCAAGCCTTTCAAGTGACATAGCCGTTGTTACAACAATTTCACTTTTTTGAAGCAAGAATTACGTACAGAAGTCTGTGTGCTTTATTTTACTAGTTGTCTATTAAGTGGCTGTTAGTGTTCCTTGATTCATCCCTGTCCTCTGTATTAATAGTTGGATTGTTTTAGTGGTATATGAATCATAATTATTAGGTACCTCTGAAGGCCCGGACTTAGAAGGCATCAATGAATTTTCTTGATTTTTTTTTTTTTTTTTTTGGGCGATTTTGTTATCTTTTGATAATTTCAGCACGTAATTCAAAAGTGTTGGGACTTCCTGGGGTGATTGTTAAGCATAAATTTTTGTTGTCTAATTTCTTGTTTAATGAAACAAGGGTTAATTTTTTTTGTCAGTTCAAAGGTGATATTTAGAGCTTGAGAGGCTCATAATTGAACTGTATTGGTCTGAACATGAAAATGATGATAGGTGTCCATGACAATGTCAAAAGCGTATATTTATTTTATAGGACCTATCATGTAGAGTCTGAAAAGGTAAAAATGTTTTTTCAATTAGGTACTTAGCGAGATGCAAGGTTTTGCTTCTCTTTCCCCTATCTGTACCAGATCTGATGTTGCAGTCTGTGGCTTTTGTTATGGGGTTCCTCTCGAGTTATCAAAGTTTCTGCTTTGCTTTTGCTACCTTTGAGATACTTCCATGTTAAATGTGGAGGAGTGATTCTCGTTTGACCTCTTGTCCTTCACAAGGCCTATTTTTTCCAGCTCTCTCCTGTAACATCTGAGGGTTTTCTCGCTTCCCCTATTGACTCCATTTTCCTCACTTTGGAAGGTTAAGATCTTCAGAGAGATTTAAGTTCAGGTCTTTCATGAGAACATTAATACTTTCGAGTGCGTGGAGAAGACTAATGGCGAACATGAAAGGCTGAAAAAGACTTGTCCGACAAAAACTATGGTTTTCTCAAGTGGATTTATTATTTAAAAATCTTAGATTTCTTCTTCTCTCAACCCTTCTCTCGTCCTTTTGCTTTTCTCTGCTTCTTATCTCTCCTCCCGTTCTCTCTTCTCTCACCTCTCAACTGAACTATCTTATTAGGGGTGTGTAGAAGGACTTTGACCATAACTTTTTGGAGTTGCTAGGTTGCTTTGTCAATTTGGTCTAAGTTCTTCAATGTCTTTGGAATGTCCATGGTGCAGTAATAGTGATTGCAGGATTATGATCAAGGAGGTTTTGCTGAATTCCCCTTTTTGGAAGAAGGGCAAAATCTTTAGGAAGACCTGTTCTTTTGCCATCATTATGGGGATTTGGCTTGAGAGGAATTATAAGATATTTGAGAGGAGGTGAGAGATTCGAGGGGGAGTTGTGGGAGGTTTTAGTTTTAATTTCACAGTTTAGTAGGCATCATTGGCTAAGTCCTTATATAGTTATTAGTTGGATTTTATTCTTTTGGATTGACGTCCTTTTTGTAGGTTGTTGGACTCCTTAGATTTTATTCTTTTGGATTGCCGTTCCTTTTTGTAGTTTGTTGAGCTCCTTTTGTTGGGCTGTCTTTTTTGTATTCTCTTGTATATCTTTTATTTTTCTCTCTGTTTCTTATGAAAAATCAGTTTTTTTTTCATGGATTACAATAACATTACCTCTAGAATAGACTAACCAGTTAAATGTTTTGAGAATTGCTAGTACATAATAGGGATGGTTTTCTTGACCTGCTCAGAAAACGATTTAGCAGCCATCTGATTTTGTTTCTTTCTTAATTATTAATTTTTGCACTACTGAATTTTCAACATCAAAAGATACTTTTTGATGGCCATATGAATTAAACAGTATTAGTTGATTTTGCAGCATATATGTAATTGATTTGGGATCTGCCCATGGAACTTTTGTGGCTAATGAGCGATTGACTAAAGACTCCCCGGTCGAGCTAGAAGCAGGACAGTCTTTGCGGTTTGCTGCATCAACGAGAACTTATATCTTGAGAAAGAATAATGCAGCACTTTTTGCTCGTCCCCCATTGCCCACCGATTTTGATTTACCACCACCTCCTGATCCATCTGATGAGGAGGCTGTTGTTTCTTATAATACACTACTAAATCGCCTAGGTCTTACCAAATCTGGCCTGCCTTCATCATCTGAAGACAACAACCCAGCAATTGCAAAAGATGCACAGCATGGAAGACCTACCAAAAAGCTTAGGAAGATGAGAGTGGCTTTCAGGGATCAACTTGGAGGGGAGCTGGTTGAAGTTGTGGGGTTTTCAGATGGTGCAGATGTAGGGACAGAACCTGGTCCAATAGGTGTTAAAGAAGGAAGTCTAGTTGGGAAATATGAGTCTCTGGTGCAGACTACCATAATACCAAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAATATTTGTCCAAAAGGCGTGACTGGTAAATTACAAGAAATCTTGAATAGGGTAAAAAATCCATCAAAAAGCGGAATTTATGATGACCTTTACGGAGAATCATTTTCAGGAAATGTGGGTTCATCCTGGGCATATTCTTCTTCTGGTACTGCTAATAAACCGTCTTCCCCTCCTGAAGTTTCGATTGGTAAAGCTTCCACTGAGAACCACGAAGAAAATAACAGGACCAATATTAATGACAGTGATGATGACTTGTTTGGTAATTGATCACAATGTGCAGAATGATCGTGGAAGTTCGTGTAGTTTTTCGTTGTGACAAAATGGTTGGAGTTCGAAGGCTGCAGCAATTCTATGGATATGAATTTTTTCTTCTTCAAATGTAACCGGAGACTTCGATGTAGTCCATCAGGAATTTTCTTTTGTAGTTGCACGCTCTACTAAGGGGCACATGTAAACCTGATTATAATATTTAAGGTTCTCTCTTCGGAAGTCTATACTGCTTAGAAATGGAGGAAATGAGAAGAATTGCGTAATTTTCATTGCAATTGTCACAGGCACATCCTCAAATCAAACGGGTGCTGGGCGTCTGTAAGGTTAGTGGTTGTTGCTTTTCTGGTGAAGGGTACACACTTTATGATTAAAGTTTCATTTTGGCTAAGAACACCATGTTCTTTTCGCATGTCAGTTACTGTTTTGTAATGTTCTGTTTCGTAGAAAGTGTTTCTGATTGAAAAGGATTTTTGTCAGTGTTTTCCTATATTATATTCCTCATATGGAAACGCTCTCTTCAAAGGATATCTGCAGGTACTAATAGGTAGATTTGCAGGCTACAAAGGATATCTATCTAGAGCTCAAGAGTAGCTTGTTCGAGCCTTTTTGGGCTGAAAAGTTGTCTTTTCATGATTCCATCAACGATGCTTCCTGGAGTCAAATTATGGCAACAGGTAATTTAATTCTCCATGTCTTGGGGCTTTAAGAGGTTATATGAATGGGGTAGAAGTTTGTAGTCATAGATGTTGGTTAGAGCCACTCCTATCAAGCAGTTGTCTGGTAAGAATTCCTTAGTTAGAAGTTTAGAAAAACAGTGGCATCCCACTGAAAGACAGAATTGGTTTTGGATGCGTTTTGGTGTGTGTGTAGTATTCCATCATAATCAGAGTCAAGTTTGACTGTTACCATTTTGGTATATGTTTAATTCTATTTCATCATGCTTCTTTTGTTACTGTCTAACTTACCTTCCTAATGTCCTCTCCCTTCCCCTTTGTACCAAAAAGCTCAAGACTTCCGTCTCGGTTGGTTTTTTATTTGATTCATGAATCTAGTCGTATATTACAGCCTATTCGATATGTAATTCGATATTATGAAAATTGTGCTCGTTTTCTTAAAGTTGAAGTGGAATGACAGTAGGTTGTATTGTGGCTGTTGAGATTAGGACAGAGCAGTGATAAGAAAATGTCATTAAAATTGATATGGGAAGATGGTGATGATGATGACTGATTTTGATTGGAGTACGATGGAATGTTGATAGGATTGAAGGGATGGGTGTGTGTCCACTTTCTTCCACCAAAAAAAATTCAATAACTTTTGGATCTGTTGGATCCAAATAAACAAATATTTGATAAATTTGACAAATTTAACATCTACTCACATGTGGGTTTAGTATTTAAAAATCCTCGATAAGTAGCTCTACTGTTGAAGTCGGAAAATGCAAATGTCAGCATTTATGGTGGAACCTATCTTTTCATAAAAATATTTCATGGCCTTGAATTCTACTTTCCAGTCTGGGTGTGGGCCATGTACATCCAGTTGACAGGCATATACGTACTCATTGGGCCTACCCTTCAGTGTAAACTGAGGGAAAGGAGCCCACATAATATAACTGTAAAACATAGATATCATAATGTATGTGTCTATACTTTAACATATATTATTTATAGAGGTTTATGTATCATACAATATCGATAACATAGCATTATCATATCATATCAGACATCAAAGCATAACCATAACATGGCATACGTCAAACAATCATAAAAATGGCGAAACATACAGATATCCATATCCTTGAAACCGTAATCAAGAATCAGTTTATGACGCACTTTATTAATATTGTATTATAATGATATCATAATTTTATATAAATAAAAAAAATTGTGTATTAATATATATGATATTTTATTTATATGTAAAGAAAAGATTTCCCCATCGGTCTTTGTATTTGGGCTTAAATGGGCTCTCCACCGAAGGCTCAAAAGATAACGACGTTGCATCAGCCCAGCAGCGCCGGAAAGATTTAGAAAAAGAAGATCATAATTTGGAGATGCGGGTTATCAATCCCGGTACCTCTCGCATGCTACATCCCCTTAACGTGTCACCTAAGTCAAGTGTTCGATAGACCTTTTGTCCACGACGGCTATGACTTGGATTTCAAAAAATGGTGAAGAATTGATGGAGTTTTTGTCCAAATTAGAGCTCGGACTTCCAATCTCATGCCGAGATTAAAAAGACAACATGAAAACAAATTAAAGTAAAAAGTAAGATAAAATGAAATACGAAAATTCGGTAAAATTTGAATTAAATTAAAAGCAAACAACATAACAATTAAAACAACATAACAATTACCCTTGAAACCCTAACCCGCCTCCTATTCTTTCCGGCAGCCATTCTCTCATAATCCCCTTCCCGCCGCTCGCTGTCGCTCCTCCGCCTCCCATTTTTCCCCTTCCCCGCCGCTTGCTGCCACTCCTCCGCCTCCCGTTTTCATTATTCGTTACTCTTGCGAGGCATTCGCGTTTCTCCGATTTGTCTTCTCAAGAGGAAGCAGGTTTTCTTTCCCCTCGCGTTTTCACAGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTAAGATCGCATCATCTCCAAAATCTACATCGCTGGATTCTATTTCGGTTAAGCCAGAGAACGATGAGAAGCCTGTAATGGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCGAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGCGCTACTTCAAACTGAGGAGAAGACTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACCGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGATAAACACCGTCCGATTCAAGGAGATTGTGGAGGAAGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCATTGCGAGCAATGAGCAAATCTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCTTCGCATTTCGAAGGCATCCATGGTGTATGATGGCTTCCGAGGACAAGATCAATGGCGTAATGGATTTCTTTGTGAACAAGATTGGATGTGAACCTTCATACGTTGCAAAGCGACCTGCTCTGATTACACTTAGTTTAAAGAAGAGGATTGAGCCAAGAGGCTGGGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTTTGCTGTTTGAGTCTACTGAAAGCCGATTCTTAGTCAAATTCATCGACCCTCATAAGGAGCTGATTCCTAGATTGTTGAAGTTGTATAAAAAGAAATTGGAGGATGCTAAGAGATAG

mRNA sequence

ATGTATGGAAGAAGTGGCCTCGATAGATTTAAGAAGGCTCAGACCTTGGAACCGTTCTCTGTAACTGTCAATTCTACTTCACATGACTCTGCTCAATCTTCTGGCAAAGAAGGCATTCAACCACTCGTTCAATATTCACAATCAAGATCTTCGCACTTTCAATCCATTGACCAACATCAATCCCATGATTCAAAAAAACTAACTGGACCTGAAGCAGGACCATTAGTGGGGCAGACTCAGCAATCAACTCAGGTTGGAGGAAGTCAGTCCACTTGGCAGCCTCCTGACTGGGCAATTGAACCACGTGCCGGAGTTTATTATCTTGAAGTCTTAAAGGATGGTGAGGTTATAGATCGAATTAATCTGGACAGGCGGAGACACATTTTTGGGAGACAATTCCATACTTGCGATTTTGTGCTTGATCACCAGTCTGTATCACGCCAACATGCTGCTGTTATTCCTCATAAGAATGGAAGCATATATGTAATTGATTTGGGATCTGCCCATGGAACTTTTGTGGCTAATGAGCGATTGACTAAAGACTCCCCGGTCGAGCTAGAAGCAGGACAGTCTTTGCGGTTTGCTGCATCAACGAGAACTTATATCTTGAGAAAGAATAATGCAGCACTTTTTGCTCGTCCCCCATTGCCCACCGATTTTGATTTACCACCACCTCCTGATCCATCTGATGAGGAGGCTGTTGTTTCTTATAATACACTACTAAATCGCCTAGGTCTTACCAAATCTGGCCTGCCTTCATCATCTGAAGACAACAACCCAGCAATTGCAAAAGATGCACAGCATGGAAGACCTACCAAAAAGCTTAGGAAGATGAGAGTGGCTTTCAGGGATCAACTTGGAGGGGAGCTGGTTGAAGTTGTGGGGTTTTCAGATGGTGCAGATGTAGGGACAGAACCTGGTCCAATAGGTGTTAAAGAAGGAAGTCTAGTTGGGAAATATGAGTCTCTGGTGCAGACTACCATAATACCAAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAATATTTGTCCAAAAGGCGTGACTGGAAATGTGGGTTCATCCTGGGCATATTCTTCTTCTGGTACTGCTAATAAACCGTCTTCCCCTCCTGAAGTTTCGATTGGTAAAGCTTCCACTGAGAACCACGAAGAAAATAACAGGACCAATATTAATGACAGTGATGATGACTTGTTTGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTAAGATCGCATCATCTCCAAAATCTACATCGCTGGATTCTATTTCGGTTAAGCCAGAGAACGATGAGAAGCCTGTAATGGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCGAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGCGCTACTTCAAACTGAGGAGAAGACTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACCGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGATAAACACCGTCCGATTCAAGGAGATTGTGGAGGAAGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCATTGCGAGCAATGAGCAAATCTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCTTCGCATTTCGAAGGCATCCATGGTGTATGATGGCTTCCGAGGACAAGATCAATGGCGTAATGGATTTCTTTGTGAACAAGATTGGATGTGAACCTTCATACGTTGCAAAGCGACCTGCTCTGATTACACTTAGTTTAAAGAAGAGGATTGAGCCAAGAGGCTGGGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTTTGCTGTTTGAGTCTACTGAAAGCCGATTCTTAGTCAAATTCATCGACCCTCATAAGGAGCTGATTCCTAGATTGTTGAAGTTGTATAAAAAGAAATTGGAGGATGCTAAGAGATAG

Coding sequence (CDS)

ATGTATGGAAGAAGTGGCCTCGATAGATTTAAGAAGGCTCAGACCTTGGAACCGTTCTCTGTAACTGTCAATTCTACTTCACATGACTCTGCTCAATCTTCTGGCAAAGAAGGCATTCAACCACTCGTTCAATATTCACAATCAAGATCTTCGCACTTTCAATCCATTGACCAACATCAATCCCATGATTCAAAAAAACTAACTGGACCTGAAGCAGGACCATTAGTGGGGCAGACTCAGCAATCAACTCAGGTTGGAGGAAGTCAGTCCACTTGGCAGCCTCCTGACTGGGCAATTGAACCACGTGCCGGAGTTTATTATCTTGAAGTCTTAAAGGATGGTGAGGTTATAGATCGAATTAATCTGGACAGGCGGAGACACATTTTTGGGAGACAATTCCATACTTGCGATTTTGTGCTTGATCACCAGTCTGTATCACGCCAACATGCTGCTGTTATTCCTCATAAGAATGGAAGCATATATGTAATTGATTTGGGATCTGCCCATGGAACTTTTGTGGCTAATGAGCGATTGACTAAAGACTCCCCGGTCGAGCTAGAAGCAGGACAGTCTTTGCGGTTTGCTGCATCAACGAGAACTTATATCTTGAGAAAGAATAATGCAGCACTTTTTGCTCGTCCCCCATTGCCCACCGATTTTGATTTACCACCACCTCCTGATCCATCTGATGAGGAGGCTGTTGTTTCTTATAATACACTACTAAATCGCCTAGGTCTTACCAAATCTGGCCTGCCTTCATCATCTGAAGACAACAACCCAGCAATTGCAAAAGATGCACAGCATGGAAGACCTACCAAAAAGCTTAGGAAGATGAGAGTGGCTTTCAGGGATCAACTTGGAGGGGAGCTGGTTGAAGTTGTGGGGTTTTCAGATGGTGCAGATGTAGGGACAGAACCTGGTCCAATAGGTGTTAAAGAAGGAAGTCTAGTTGGGAAATATGAGTCTCTGGTGCAGACTACCATAATACCAAAAGGCAAGGAGCAGTCTTCTTTGAGGGGAGATAATATTTGTCCAAAAGGCGTGACTGGAAATGTGGGTTCATCCTGGGCATATTCTTCTTCTGGTACTGCTAATAAACCGTCTTCCCCTCCTGAAGTTTCGATTGGTAAAGCTTCCACTGAGAACCACGAAGAAAATAACAGGACCAATATTAATGACAGTGATGATGACTTGTTTGTCATGTTGTTGCTTCGTCGGATCATTATAGTCAGGCAGCCATCATCAGTCTTTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTCATCGACTTCTTCTAAGATCGCATCATCTCCAAAATCTACATCGCTGGATTCTATTTCGGTTAAGCCAGAGAACGATGAGAAGCCTGTAATGGTGCTCTTTGAGAATCATGGATTCTCAAAAACACAGATCTCTGAGCTTGTCAAGAAATTCCCTCGAGTTCTTTCAGCGAACCCCGAAAAGACGCTATTGCCAAAATTGTTGTTCTTTCAATCGAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAGTGTGTGGTTTTCCTTCGATTTTAACGCGAAGTTTAGACAGAAAAATCATTCCAGCTTTTGATTACATTCAAGCGCTACTTCAAACTGAGGAGAAGACTATCGCATCCATAAAACGGTCTTTAGGTATTCTCACTTGGGATCTCCAAACCGTTCGTCCCAATGTTGAAACTCTAATACAAATTGGAGTTCCTGATTCCAACATTGCAACCATTCTTCAGTACCAACCACGAGTGTTCTTGATAAACACCGTCCGATTCAAGGAGATTGTGGAGGAAGTTAAGGAAATGGGATTCAACCCTCTGCGATTGAAGTTTGTTCTTGCTGTTTTTGCATTGCGAGCAATGAGCAAATCTACATGGAGAAAAAAAGTTGAAGTTTACAAGAAATGGGGATGGCCTGAAGAAGAGATTCTCTTCGCATTTCGAAGGCATCCATGGTGTATGATGGCTTCCGAGGACAAGATCAATGGCGTAATGGATTTCTTTGTGAACAAGATTGGATGTGAACCTTCATACGTTGCAAAGCGACCTGCTCTGATTACACTTAGTTTAAAGAAGAGGATTGAGCCAAGAGGCTGGGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAAGATGTGAATCTTCCTTTGCTGTTTGAGTCTACTGAAAGCCGATTCTTAGTCAAATTCATCGACCCTCATAAGGAGCTGATTCCTAGATTGTTGAAGTTGTATAAAAAGAAATTGGAGGATGCTAAGAGATAG

Protein sequence

MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQSHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRINLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTKDSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTLLNRLGLTKSGLPSSSEDNNPAIAKDAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVTGNVGSSWAYSSSGTANKPSSPPEVSIGKASTENHEENNRTNINDSDDDLFVMLLLRRIIIVRQPSSVFAHGFSESPLKSLRYSSTSSKIASSPKSTSLDSISVKPENDEKPVMVLFENHGFSKTQISELVKKFPRVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQALLQTEEKTIASIKRSLGILTWDLQTVRPNVETLIQIGVPDSNIATILQYQPRVFLINTVRFKEIVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWRKKVEVYKKWGWPEEEILFAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYVAKRPALITLSLKKRIEPRGWVYQVLLSKGLIKKDVNLPLLFESTESRFLVKFIDPHKELIPRLLKLYKKKLEDAKR

Homology

[Close]

BLAST of CmaCh13G003380 vs. Swiss-Prot
Match: PP1R8_HUMAN (Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens GN=PPP1R8 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-19
Identity = 76/261 (29.12%), Postives = 132/261 (50.57%), Query Frame = 1


Query: 86  GGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRINLDRRRH-IFGRQFHTCDFVLDHQS 145
           G S   +  P WA +P  G++ L+V+K  ++I+++ +D +++ +FGR    CDF +DHQS
Sbjct: 8   GSSLPLFDCPTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQS 67

Query: 146 VSRQHAAVIPHKN-GSIYVIDLGSAHGTFVANERLTKDSPVELEAGQSLRFAASTRTYIL 205
            SR HAA++ HK+   +++IDL S HGTF+ + RL    P ++    ++ F ASTR Y L
Sbjct: 68  CSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 127

Query: 206 RKN----NAALFARPPLPTDFD-----LPPPPDPSDEEAVVSYNTLLNRLGLTKSGLPSS 265
           R+      +A+     +  + D     L  P + ++ + +  +NT  N+   T      +
Sbjct: 128 REKPQTLPSAVKGDEKMGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRIST-----LT 187

Query: 266 SEDNNPAIAKDAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEG 325
            E+ N  I       RP +K +  RV F      E  E++   D      +P        
Sbjct: 188 IEEGNLDIQ------RPKRKRKNSRVTF-----SEDDEIINPED-----VDPS------- 237

Query: 326 SLVGKYESLVQTTIIPKGKEQ 336
             VG++ ++VQT ++P  K++
Sbjct: 248 --VGRFRNMVQTAVVPVKKKR 237

[Close]

BLAST of CmaCh13G003380 vs. Swiss-Prot
Match: PP1R8_MOUSE (Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus GN=Ppp1r8 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-19
Identity = 76/261 (29.12%), Postives = 132/261 (50.57%), Query Frame = 1


Query: 86  GGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRINLDRRRH-IFGRQFHTCDFVLDHQS 145
           G S   +  P WA +P  G++ L+V+K  ++I+++ +D +++ +FGR    CDF +DHQS
Sbjct: 8   GSSLPLFDCPTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQS 67

Query: 146 VSRQHAAVIPHKN-GSIYVIDLGSAHGTFVANERLTKDSPVELEAGQSLRFAASTRTYIL 205
            SR HAA++ HK+   +++IDL S HGTF+ + RL    P ++    ++ F ASTR Y L
Sbjct: 68  CSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 127

Query: 206 RKN----NAALFARPPLPTDFD-----LPPPPDPSDEEAVVSYNTLLNRLGLTKSGLPSS 265
           R+      +A+     +  + D     L  P + ++ + +  +NT  N+   T      +
Sbjct: 128 REKPQTLPSAVKGDEKMGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRIST-----LT 187

Query: 266 SEDNNPAIAKDAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEG 325
            E+ N  I       RP +K +  RV F      E  E++   D      +P        
Sbjct: 188 IEEGNLDIQ------RPKRKRKNSRVTF-----SEDDEIINPED-----VDPS------- 237

Query: 326 SLVGKYESLVQTTIIPKGKEQ 336
             VG++ ++VQT ++P  K++
Sbjct: 248 --VGRFRNMVQTAVVPVKKKR 237

[Close]

BLAST of CmaCh13G003380 vs. Swiss-Prot
Match: PP1R8_BOVIN (Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-19
Identity = 76/261 (29.12%), Postives = 132/261 (50.57%), Query Frame = 1


Query: 86  GGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRINLDRRRH-IFGRQFHTCDFVLDHQS 145
           G S   +  P WA +P  G++ L+V+K  ++I+++ +D +++ +FGR    CDF +DHQS
Sbjct: 8   GSSLPLFDCPTWAGKPPPGLH-LDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQS 67

Query: 146 VSRQHAAVIPHKN-GSIYVIDLGSAHGTFVANERLTKDSPVELEAGQSLRFAASTRTYIL 205
            SR HAA++ HK+   +++IDL S HGTF+ + RL    P ++    ++ F ASTR Y L
Sbjct: 68  CSRVHAALVYHKHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 127

Query: 206 RKN----NAALFARPPLPTDFD-----LPPPPDPSDEEAVVSYNTLLNRLGLTKSGLPSS 265
           R+      +A+     +  + D     L  P + ++ + +  +NT  N+   T      +
Sbjct: 128 REKPQTLPSAVKGDEKMGGEDDELKGLLGLPEEETELDNLTEFNTAHNKRIST-----LT 187

Query: 266 SEDNNPAIAKDAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEG 325
            E+ N  I       RP +K +  RV F      E  E++   D      +P        
Sbjct: 188 IEEGNLDIQ------RPKRKRKNSRVTF-----SEDDEIINPED-----VDPS------- 237

Query: 326 SLVGKYESLVQTTIIPKGKEQ 336
             VG++ ++VQT ++P  K++
Sbjct: 248 --VGRFRNMVQTAVVPVKKKR 237

[Close]

BLAST of CmaCh13G003380 vs. Swiss-Prot
Match: NADAP_HUMAN (Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.5e-10
Identity = 56/198 (28.28%), Postives = 84/198 (42.42%), Query Frame = 1


Query: 24  NSTSHDSAQSSGKEGIQ------PLVQYSQSRSSHFQSIDQHQSHDSKKLTGPEAGPLVG 83
           +S++ +  Q  G   +Q      P +   Q     F+S+ + QS     ++ P  GP   
Sbjct: 93  SSSNPEEVQKEGPTALQDSNSGEPDIPPPQPDCGDFRSLQEEQSRPPTAVSSP-GGP--- 152

Query: 84  QTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRINLDRRRHIFGRQFHTCD 143
                         +Q P W   P    Y LE LK G ++   +L    +    +   CD
Sbjct: 153 ---------ARAPPYQEPPWG-GPATAPYSLETLKGGTILGTRSLKGTSYCLFGRLSGCD 212

Query: 144 FVLDHQSVSRQHAAVIPHK----------NG-SIYVIDLGSAHGTFVANERLTKDSPVEL 203
             L+H SVSR HA V+ H+          NG   Y+ DLGS HGTF+   R+   +   +
Sbjct: 213 VCLEHPSVSRYHA-VLQHRASGPDGECDSNGPGFYLYDLGSTHGTFLNKTRIPPRTYCRV 272

Query: 204 EAGQSLRFAASTRTYILR 205
             G  +RF  STR +IL+
Sbjct: 273 HVGHVVRFGGSTRLFILQ 275

[Close]

BLAST of CmaCh13G003380 vs. Swiss-Prot
Match: SNIP1_RAT (Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.2e-07
Identity = 44/157 (28.03%), Postives = 75/157 (47.77%), Query Frame = 1


Query: 93  QPPDWAIEPRAGVYYLEVLKDGEVIDRINLDRRR-HIFGRQFHTCDFVLDHQSVSRQHAA 152
           +PP+  I  +   + L   K+ EV+  + + R+  ++ GR     D  +DH S S+QHA 
Sbjct: 239 EPPEARIPKKR--WRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAV 298

Query: 153 V------IPHKNGSI------YVIDLGSAHGTFVANERLTKDSPVELEAGQSLRFAASTR 212
                      +G++      Y+IDLGS +GTF+ N+R+      EL+    L+F  S+R
Sbjct: 299 FQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSR 358

Query: 213 TYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVS 237
            Y+L   ++         ++ D     D  +EE +VS
Sbjct: 359 EYVLLHESSD-------TSELDRKEDEDEEEEEEMVS 386

[Close]

BLAST of CmaCh13G003380 vs. TrEMBL
Match: A0A0A0LVY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170010 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 1.2e-195
Identity = 360/428 (84.11%), Postives = 376/428 (87.85%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGRSGLDRFKKAQTLEPF+VTVNSTSHDS QSS KE IQPLV YSQSRSSHFQ+I+QHQ
Sbjct: 1   MYGRSGLDRFKKAQTLEPFAVTVNSTSHDSTQSSTKEAIQPLVPYSQSRSSHFQTINQHQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
           SHDS+K+ GPEAGPLVGQTQQ TQVGGSQSTWQPPDWAIEPR+GVYYLEVLKDGEVIDRI
Sbjct: 61  SHDSQKVIGPEAGPLVGQTQQLTQVGGSQSTWQPPDWAIEPRSGVYYLEVLKDGEVIDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLD+RRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK
Sbjct: 121 NLDKRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           DSPVELEAGQSLRFAASTRTYILRKN+AALF RPPLPT+ DLPPPPDPSDEEAVVSYNTL
Sbjct: 181 DSPVELEAGQSLRFAASTRTYILRKNDAALFPRPPLPTEVDLPPPPDPSDEEAVVSYNTL 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIAK-DAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300
           LNR GLTKS LPSSSED++PA AK D +HGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG
Sbjct: 241 LNRYGLTKSRLPSSSEDSSPASAKEDTRHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300

Query: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT---------- 360
           ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKE SSLRGDNI PKGVT          
Sbjct: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEPSSLRGDNISPKGVTGKLQEILNRV 360

Query: 361 ------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKASTENHEENNRTNI 400
                             GNVGSSWAYSS+G+ANK SSPP+  I +    NHEENNRTN 
Sbjct: 361 KNPSKSGVYDDLYGESFSGNVGSSWAYSSAGSANKLSSPPKDLIPR----NHEENNRTNT 420

[Close]

BLAST of CmaCh13G003380 vs. TrEMBL
Match: A0A067KUL3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08977 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.2e-143
Identity = 283/437 (64.76%), Postives = 322/437 (73.68%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGR+GL+RFKKAQ+ EPFSVTVNST   + Q + K      VQY  S++   Q+ +QHQ
Sbjct: 1   MYGRAGLERFKKAQSSEPFSVTVNSTPKTTTQQAPKTVTHSSVQYLHSQT---QTQNQHQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
           ++  +K  GPEAGPLVGQTQQ TQVGG QSTWQPPDWAIEPR+GVYYLEVLKDGEV+DRI
Sbjct: 61  TYVPQKPAGPEAGPLVGQTQQLTQVGGGQSTWQPPDWAIEPRSGVYYLEVLKDGEVLDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLDRRRHIFGRQ HTCDFVLDHQSVSRQHAAVIPHKNGSI+VIDLGSAHGTFVANERLTK
Sbjct: 121 NLDRRRHIFGRQSHTCDFVLDHQSVSRQHAAVIPHKNGSIFVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           D PVELE GQSLRFAASTRTYILRKN+AALF RPP P++ +LPPPPDPSDEEAVV+YNTL
Sbjct: 181 DVPVELEVGQSLRFAASTRTYILRKNDAALFTRPPPPSEINLPPPPDPSDEEAVVAYNTL 240

Query: 241 LNRLGLT---------KSGLPSSSEDNNPAIAKDAQHGRPTKKLRKMRVAFRDQLGGELV 300
           +NR GL+         KSG  SS+ D+N       Q GR  K+++K RVAFRDQ+GGELV
Sbjct: 241 INRYGLSNPDLLSKSGKSGSSSSTRDDN------QQSGRAAKRMKKTRVAFRDQVGGELV 300

Query: 301 EVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT-- 360
           EVVG SDGADV TEPGPIGVKEGSLVGKYESLVQTT+IPKGKEQSS + ++     VT  
Sbjct: 301 EVVGISDGADVETEPGPIGVKEGSLVGKYESLVQTTVIPKGKEQSSAKENSASQAAVTNK 360

Query: 361 --------------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKASTENH 400
                                     G VGSSWAYSS  +  KP  P +    +++    
Sbjct: 361 LQEVLNKVRTPPKSGMYDDLYGEAFSGKVGSSWAYSSVNSGTKPDPPIKDDAQQSALSGK 420

[Close]

BLAST of CmaCh13G003380 vs. TrEMBL
Match: U5G552_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00500g PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.9e-140
Identity = 275/432 (63.66%), Postives = 317/432 (73.38%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGR+GL+RFKKA++ EPFSV+VNS    +   + K   QP VQYSQS++   QS  + Q
Sbjct: 1   MYGRAGLERFKKAESTEPFSVSVNSAPKTTTLPATKTVTQPSVQYSQSKT---QSQFRDQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
            H ++K   PEAGPL+G TQ  TQVGG QSTWQPPDWAIEPR GVYYLEVLKDGEV+DRI
Sbjct: 61  PHAAQKPEVPEAGPLLGNTQPVTQVGGGQSTWQPPDWAIEPRPGVYYLEVLKDGEVLDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLDRRRHIFGRQ  TCDFVLDHQSVSRQHA VIPHKNGSI+VIDLGSAHGTFVANERLTK
Sbjct: 121 NLDRRRHIFGRQIPTCDFVLDHQSVSRQHAVVIPHKNGSIFVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           D+PVELE GQSLRFAASTRTYILRKN+AALF  PP P+D ++PPPPDPSDEEAVV+YNT 
Sbjct: 181 DTPVELEVGQSLRFAASTRTYILRKNDAALFPHPPPPSDINIPPPPDPSDEEAVVAYNTF 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIAK---DAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFS 300
           LNR GL K  L + S +++ ++++   D Q  R  K+++K RV FRDQ+GGELVEVVG S
Sbjct: 241 LNRYGLNKPDLSTKSSESSDSLSRRHDDLQSERAAKRIKKARVVFRDQVGGELVEVVGIS 300

Query: 301 DGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT-------- 360
           DGADV TEPGPIGVKEGSLVGKYESLVQ T+IPKGKEQ S + +N   KGVT        
Sbjct: 301 DGADVETEPGPIGVKEGSLVGKYESLVQVTVIPKGKEQFSAKENNASQKGVTSKLQQVLN 360

Query: 361 --------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKA--STENHEENN 400
                               G VGSSWAYSS  +A   +SP +   G A  S   + +NN
Sbjct: 361 KVKAAPKIGMYDDLYGESFAGKVGSSWAYSSDSSAGNAASPTKDGQGNATGSLSGNPQNN 420

[Close]

BLAST of CmaCh13G003380 vs. TrEMBL
Match: W9RA39_9ROSA (Nuclear inhibitor of protein phosphatase 1 OS=Morus notabilis GN=L484_017941 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 5.6e-140
Identity = 275/438 (62.79%), Postives = 321/438 (73.29%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVT-VNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQH 60
           MYGR+GLDRFKKAQ+LEPFSVT +NS S  S+ +      +P+  +S        S+ QH
Sbjct: 1   MYGRAGLDRFKKAQSLEPFSVTTLNSASKSSSTT------KPVTAHS--------SVLQH 60

Query: 61  QSHDSKKLTGPE-------AGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLK 120
             H +    GP+       A  LVGQTQQ TQVGG QSTWQPPDWAIEPRAGVYYLE+LK
Sbjct: 61  PRHQTNAAQGPQKPAGQEAAATLVGQTQQVTQVGGGQSTWQPPDWAIEPRAGVYYLEILK 120

Query: 121 DGEVIDRINLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTF 180
           DGEV+DRINLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPH+NGSIYVIDLGSAHGTF
Sbjct: 121 DGEVLDRINLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHRNGSIYVIDLGSAHGTF 180

Query: 181 VANERLTKDSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEE 240
           VANERLTKD+PVELE GQSLRFAASTRTYILRKNN ALF RPPLPT+ +LPPPPDPSDEE
Sbjct: 181 VANERLTKDTPVELEVGQSLRFAASTRTYILRKNNEALFPRPPLPTEINLPPPPDPSDEE 240

Query: 241 AVVSYNTLLNRLGLTKSGLPSSSEDNNPAIA--KDAQHGRPTKKLRKMRVAFRDQLGGEL 300
           A+V+YNTLLNR G+ K  +PS S+ +  + +   D+   RP K+ +K RVAFRDQ+GGEL
Sbjct: 241 AIVAYNTLLNRYGINKPVVPSKSDGSGRSASGTDDSHTERPAKRTKKARVAFRDQVGGEL 300

Query: 301 VEVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT- 360
            EVVG SDGADV TEPGPIGVKEG+LVGKYESLVQ T+IPKGKEQ+  + D+   KGVT 
Sbjct: 301 EEVVGISDGADVETEPGPIGVKEGTLVGKYESLVQITVIPKGKEQNLAKEDSSSQKGVTG 360

Query: 361 ---------------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKAST-E 400
                                      G VGSSWAY S  ++ KP+SP + +  K+S+ E
Sbjct: 361 KLQEVLNKVKSAPTSGIYDDLYGESFAGKVGSSWAYPSVSSSGKPASPTKDTEEKSSSVE 420

[Close]

BLAST of CmaCh13G003380 vs. TrEMBL
Match: B9SGC5_RICCO (Nuclear inhibitor of protein phosphatase-1, putative OS=Ricinus communis GN=RCOM_0882630 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 3.4e-137
Identity = 277/432 (64.12%), Postives = 322/432 (74.54%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGR+GLDRFKKAQ+ +PFSV++NS S  ++Q + K    P V + QS++   QS  Q+Q
Sbjct: 1   MYGRAGLDRFKKAQSSDPFSVSINSASKTTSQHAPKAVANPSVLHLQSQT---QSQYQYQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
           S+  +K  G EAGPLVGQTQQ TQVGG QS W PPDWAIEPR GVYYLEVLKDGEV+DRI
Sbjct: 61  SNVPQKSVGLEAGPLVGQTQQVTQVGGGQSAWLPPDWAIEPRPGVYYLEVLKDGEVLDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLDRRRHIFGRQ H CDFVLDHQSVSRQHAAVIPHKNGSI+VIDLGSAHGTFVANERLTK
Sbjct: 121 NLDRRRHIFGRQAHACDFVLDHQSVSRQHAAVIPHKNGSIFVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           D+PVELE GQSLRFAASTRTYILRKN+AALF RPP P++ +LPPPPDP+DEEAVV+YNTL
Sbjct: 181 DAPVELEVGQSLRFAASTRTYILRKNDAALFPRPP-PSEINLPPPPDPTDEEAVVAYNTL 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIAKDAQH-GRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300
           LNR GL   G P+S   +  +  +D Q  GR TK+L+K RV F+DQ+GGELVEVVGFSDG
Sbjct: 241 LNRYGL---GNPNSKSVSTLSGQEDGQQSGRATKRLKKARVVFKDQVGGELVEVVGFSDG 300

Query: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT---------- 360
           ADV TEPGP+GVKEGSLVGKYESL+QTT+IPKGKEQ   + +N    GVT          
Sbjct: 301 ADVETEPGPLGVKEGSLVGKYESLIQTTVIPKGKEQLPKKENNASQAGVTNKLREVLNKV 360

Query: 361 ------------------GNVGSSWAYSSSGTANK--PS--SPPEVSIGKASTENHEENN 400
                             G +GS+WAYSS     K  PS     + +IG AS+E    N+
Sbjct: 361 KTVPRSGIYDDLYGETFSGKLGSAWAYSSVTPGGKLDPSIKDAQQKAIG-ASSEKLGNNS 420

[Close]

BLAST of CmaCh13G003380 vs. TAIR10
Match: AT5G47790.1 (AT5G47790.1 SMAD/FHA domain-containing protein )

HSP 1 Score: 374.8 bits (961), Expect = 1.3e-103
Identity = 195/296 (65.88%), Postives = 227/296 (76.69%), Query Frame = 1


Query: 38  GIQPLVQYSQSRSSHFQSIDQHQSHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDW 97
           G   L ++ +S++S   S+  +     ++   PEA  L GQ    TQ+G  QS W PPDW
Sbjct: 3   GRSGLDRFKKSQTSEPFSVSANPPPVVQQHLSPEA--LSGQ---KTQIGAGQSNWHPPDW 62

Query: 98  AIEPRAGVYYLEVLKDGEVIDRINLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKN 157
           AIEPRAGVY LEV+KDG+++DRI+LDRRRHIFGRQ  TCDFVLDHQSVSRQHAAV+PHKN
Sbjct: 63  AIEPRAGVYSLEVVKDGQILDRIHLDRRRHIFGRQHQTCDFVLDHQSVSRQHAAVVPHKN 122

Query: 158 GSIYVIDLGSAHGTFVANERLTKDSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLP 217
           GSI+VIDLGSAHGTFVANERLTKD+PVELE GQSLRFAASTR Y+LRKN+ ALF+RPP P
Sbjct: 123 GSIFVIDLGSAHGTFVANERLTKDTPVELEVGQSLRFAASTRIYLLRKNSEALFSRPPPP 182

Query: 218 TDFDLPPPPDPSDEEAVVSYNTLLNRLGLTKSGLPSSSEDNNPAIAKDAQHGRPTKKLRK 277
            +  LPPPPD SDEEAVV+YNTLLNR GL+      S         K        K+++K
Sbjct: 183 AEIKLPPPPDASDEEAVVAYNTLLNRYGLSNG---ESGGMLGKRKEKTGSEAGVAKRMKK 242

Query: 278 MRVAFRDQLGGELVEVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGK 334
           +RV+FRDQLGGEL E+VG SDGADV TEPGPI VKEGSLVGKYESLV+ T+IPKGK
Sbjct: 243 VRVSFRDQLGGELAEIVGMSDGADVETEPGPINVKEGSLVGKYESLVRVTLIPKGK 290

[Close]

BLAST of CmaCh13G003380 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-62
Identity = 128/318 (40.25%), Postives = 203/318 (63.84%), Query Frame = 1


Query: 441 SPKSTSLDSISVKPENDEKP--VMVLFENHGFSKTQISELVKKFPRVLSANPEKTLLPKL 500
           SP S ++ S  +  ++ E+P  V+ L  +HGF+  QIS LVKK P +L AN E  LLPKL
Sbjct: 82  SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKL 141

Query: 501 LFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQALLQTEEKTIASIKRSLGIL 560
            FF S G+S   +A+ +   P+ILTRSL  ++IP++++++++L ++EK +A+++R+  + 
Sbjct: 142 SFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVF 201

Query: 561 TWD-LQTVRPNVETLIQIGVPDSNIATILQYQPRVFLINTVRFKEIVEEVKEMGFNPLRL 620
             D  + + PN+  + + GVP+  I  +L + P   +     F+ I ++ +EMGFNP + 
Sbjct: 202 LEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKS 261

Query: 621 KFVLAVFALRAM-SKSTWRKKVEVYKKWGWPEEEILFAFRRHPWCMMASEDKINGVMDFF 680
            FVLA+ AL    +KS W K  EVY++WGW E++I+ AF++HP CMM SE KIN  M++F
Sbjct: 262 TFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYF 321

Query: 681 VNKIGCEPSYVAKRPALITLSLKKRIEPRGWVYQVLLSKGLIKKDVNLPLLFESTESRFL 740
           VN++   P  +A+ P ++  SL+KRI PR  V +VL+S GL+K+D +L  L    E  FL
Sbjct: 322 VNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFL 381

Query: 741 VKFIDPHKELIPRLLKLY 755
            K +  ++E +P L+ LY
Sbjct: 382 EKLVIKYEEELPELMNLY 399

[Close]

BLAST of CmaCh13G003380 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-52
Identity = 113/331 (34.14%), Postives = 195/331 (58.91%), Query Frame = 1


Query: 426 LKSLRYSSTSSKIASSPKSTSLDSISVKPENDEKP--VMVLFENHGFSKTQISELVKKFP 485
           L+S   S        S +S   +S  VK  + +KP  V+ LF++HGF+  QI+ ++K FP
Sbjct: 54  LESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFP 113

Query: 486 RVLSANPEKTLLPKLLFFQSKGLSSPEIAKLVCGFPSILTRSLDRKIIPAFDYIQALLQT 545
           RVLS +PE  + PKL+FF S G S+ + AK++   P +L+ SL +++IP +D ++++L  
Sbjct: 114 RVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVE 173

Query: 546 EEKTIASIKRSLGILTWDL-QTVRPNVETLIQIGVPDSNIATILQYQPRVFLINTVRFKE 605
           EE  +  +KR +   +  +   V   V    ++GVPD +I  ++Q  P  F     RF E
Sbjct: 174 EESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNE 233

Query: 606 IVEEVKEMGFNPLRLKFVLAVFALRAMSKSTWRKKVEVYKKWGWPEEEILFAFRRHPWCM 665
           ++  V   GF+P +  FV A+ A    S+S   +K ++++ +GW +E+ + A  R P C+
Sbjct: 234 VLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCV 293

Query: 666 MASEDKINGVMDFFVNKIGCEPSYVAKRPALITLSLKKRIEPRGWVYQVLLSKGLIKK-D 725
             S++KI   +++ VN IG +   +  RP +++LS++KRI+PR  V  +LLSKGL+KK D
Sbjct: 294 TVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKED 353

Query: 726 VNLPLLFESTESRFLVKFIDPHKELIPRLLK 753
           +N   + +   S F+ KF+  +++ +P+L++
Sbjct: 354 INYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CmaCh13G003380 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-36
Identity = 95/313 (30.35%), Postives = 170/313 (54.31%), Query Frame = 1


Query: 451 SVKPENDEKPVMVLFENHGFSKTQISELVKKFPRVLSANPEKTLLPKLLFFQSKGLSSPE 510
           ++K     + V+ + +++ FS TQI + ++  PR++  N EK L PKL FF+  G +   
Sbjct: 64  NLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSG 123

Query: 511 IAKLVCGFPSILTRSLDRKIIPAFDYIQALLQTEEKTIASIKRSLGILTWDLQT---VRP 570
           + K V    S++  SL +K+IP  + +++++  + + +  I    G L         + P
Sbjct: 124 LGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLP 183

Query: 571 NVETLIQIGVPDSNIATILQYQPRVFLINTVRFKEIVEEVKEMGFNPLRLKFVLAVFALR 630
           N+  L   G+  S +A++L+ QPR+F ++  + +  V    ++GF       V AV +L 
Sbjct: 184 NISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLS 243

Query: 631 AMSKSTWRKKVEVYKKWGWPEEEILFAFRRHPWCMMASEDKINGVMDFFVNKIGCEPSYV 690
           ++S+ T+ +KV+++   G+ E+EI    RR P  +  SEDK+    +F++ ++G E   +
Sbjct: 244 SLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREAL 303

Query: 691 AKRPALITLSLKKRIEPRGWVYQVLLSKGLI----KKDVNLPLLFESTESRFLVKFIDPH 750
           AKRP +++ +L+KR+ PR  V Q+L  KGL+    KK  N+  + E TE  FL K++   
Sbjct: 304 AKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRF 363

Query: 751 -KELIPRLLKLYK 756
             E+   LL  YK
Sbjct: 364 GDEIAEELLVAYK 376

[Close]

BLAST of CmaCh13G003380 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 114.4 bits (285), Expect = 3.1e-25
Identity = 72/230 (31.30%), Postives = 131/230 (56.96%), Query Frame = 1


Query: 450 ISVKPENDEKPVMVLFENHGFSKTQISELVKKFPRVLSANPEKTLLPKLLFFQSKGLSSP 509
           +S + +N+   V+ L  +HGF+ +QIS +++ +P++L A+ EK+L PKL F QS+G SS 
Sbjct: 76  VSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSS 135

Query: 510 EIAKLVCGFPSILTRSLDRKIIPAFDYIQALLQTEEKTIASIKRSLGILTWDLQTVRPNV 569
           EI ++V   P IL +   + I   +D+I+  L   EK+  + K    +   +L+    NV
Sbjct: 136 EITEIVSSVPEILGKKGHKTISVYYDFIKDTLL--EKSSKNEKLCHSLPQGNLENKIRNV 195

Query: 570 ETLIQIGVPDSNIATIL--QYQPRVFLINTVRFKEIVEEVKEMGFNPLRLKFVLAVFALR 629
             L ++G+P   + ++L    QP   +    +F+E +++V EMGF+P   KFV A+  + 
Sbjct: 196 SVLRELGMPHKLLFSLLISDSQP---VCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 255

Query: 630 AMSKSTWRKKVEVYKKWGWPEEEILFAFRRHPWCMMASEDKINGVMDFFV 678
            M++ T  +KV +YK  G+   ++  +F++ P  +  SE K+   ++ F+
Sbjct: 256 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

[Close]

BLAST of CmaCh13G003380 vs. NCBI nr
Match: gi|449443484|ref|XP_004139507.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis sativus])

HSP 1 Score: 691.4 bits (1783), Expect = 1.7e-195
Identity = 360/428 (84.11%), Postives = 376/428 (87.85%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGRSGLDRFKKAQTLEPF+VTVNSTSHDS QSS KE IQPLV YSQSRSSHFQ+I+QHQ
Sbjct: 1   MYGRSGLDRFKKAQTLEPFAVTVNSTSHDSTQSSTKEAIQPLVPYSQSRSSHFQTINQHQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
           SHDS+K+ GPEAGPLVGQTQQ TQVGGSQSTWQPPDWAIEPR+GVYYLEVLKDGEVIDRI
Sbjct: 61  SHDSQKVIGPEAGPLVGQTQQLTQVGGSQSTWQPPDWAIEPRSGVYYLEVLKDGEVIDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLD+RRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK
Sbjct: 121 NLDKRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           DSPVELEAGQSLRFAASTRTYILRKN+AALF RPPLPT+ DLPPPPDPSDEEAVVSYNTL
Sbjct: 181 DSPVELEAGQSLRFAASTRTYILRKNDAALFPRPPLPTEVDLPPPPDPSDEEAVVSYNTL 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIAK-DAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300
           LNR GLTKS LPSSSED++PA AK D +HGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG
Sbjct: 241 LNRYGLTKSRLPSSSEDSSPASAKEDTRHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300

Query: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT---------- 360
           ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKE SSLRGDNI PKGVT          
Sbjct: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEPSSLRGDNISPKGVTGKLQEILNRV 360

Query: 361 ------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKASTENHEENNRTNI 400
                             GNVGSSWAYSS+G+ANK SSPP+  I +    NHEENNRTN 
Sbjct: 361 KNPSKSGVYDDLYGESFSGNVGSSWAYSSAGSANKLSSPPKDLIPR----NHEENNRTNT 420

[Close]

BLAST of CmaCh13G003380 vs. NCBI nr
Match: gi|659118084|ref|XP_008458942.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis melo])

HSP 1 Score: 684.5 bits (1765), Expect = 2.1e-193
Identity = 356/428 (83.18%), Postives = 375/428 (87.62%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGRSGLDRFKKAQTLEPF+VTVNSTSHDS QSS KEGIQPLV YSQSRSSHFQ+I+QHQ
Sbjct: 1   MYGRSGLDRFKKAQTLEPFAVTVNSTSHDSTQSSTKEGIQPLVPYSQSRSSHFQTINQHQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
           SHDS+K+ GPEAGPLVGQ+QQ TQVGGSQSTWQPPDWAIEPR+GVYYLEVLKDGEVIDRI
Sbjct: 61  SHDSQKVIGPEAGPLVGQSQQLTQVGGSQSTWQPPDWAIEPRSGVYYLEVLKDGEVIDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLD+RRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK
Sbjct: 121 NLDKRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           DSPVELEAGQSLRFAASTRTYILRKN+AALF RPPLPT+ DLPPPPDPSDEEAVVSYNTL
Sbjct: 181 DSPVELEAGQSLRFAASTRTYILRKNDAALFPRPPLPTEVDLPPPPDPSDEEAVVSYNTL 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIAK-DAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300
           LNR GLTKSGLPSSSED++PA AK D +HGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG
Sbjct: 241 LNRYGLTKSGLPSSSEDSSPASAKEDTRHGRPTKKLRKMRVAFRDQLGGELVEVVGFSDG 300

Query: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT---------- 360
           ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKE  SLRG+NI PKGVT          
Sbjct: 301 ADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEPFSLRGENISPKGVTGKLQEILNRV 360

Query: 361 ------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKASTENHEENNRTNI 400
                             GNVGSSWAYSS+G+AN+ SSPP+  I    T   E+NNRTN 
Sbjct: 361 KNPSKTGVYDDLYGESFSGNVGSSWAYSSAGSANRLSSPPKDLI----TRKLEDNNRTNT 420

[Close]

BLAST of CmaCh13G003380 vs. NCBI nr
Match: gi|1009107576|ref|XP_015880422.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Ziziphus jujuba])

HSP 1 Score: 519.2 bits (1336), Expect = 1.2e-143
Identity = 277/430 (64.42%), Postives = 325/430 (75.58%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           M+GR+GLDRFKKAQTLEPFSV+ NS S  ++QSS K   QP V +SQS++S  Q+  QHQ
Sbjct: 1   MFGRAGLDRFKKAQTLEPFSVSTNSASKSASQSSPKPVTQPSVLHSQSKNSILQTQYQHQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
              ++K   PEA PLVGQ QQ TQVGG QSTWQPPDWAIEPR+GVYYLEVLKDGEV+DRI
Sbjct: 61  VRVAQKPEVPEAAPLVGQAQQVTQVGGGQSTWQPPDWAIEPRSGVYYLEVLKDGEVLDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLDRRR IFGRQF TCD+VLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK
Sbjct: 121 NLDRRRQIFGRQFQTCDYVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           D+PVELE GQSLRFAASTRTYILRKN+AALF RPPLP++ +LPPPPDPSDEEA+V+YNTL
Sbjct: 181 DTPVELEVGQSLRFAASTRTYILRKNSAALFPRPPLPSEINLPPPPDPSDEEALVAYNTL 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIA---KDAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFS 300
           LNR G++K+   + S ++  +I       Q  R TK++RK RVAFRDQ+GGELVEVVG S
Sbjct: 241 LNRYGISKTDELAKSHESGSSIGGTIDSQQLERATKRIRKARVAFRDQVGGELVEVVGVS 300

Query: 301 DGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT-------- 360
           DGADV TEPGP+GVKEGSLVGKYESLVQ T++PKGKEQ+S++GDN   K VT        
Sbjct: 301 DGADVETEPGPVGVKEGSLVGKYESLVQITVVPKGKEQNSVKGDNSSQKDVTDKLQEVLN 360

Query: 361 --------------------GNVGSSWAYSSSGTANKPSS--PPEVSIGKASTENHEENN 398
                               G VGSSWA+S   ++ KP+S    +      S +   +++
Sbjct: 361 KVKGAPRSGIYDDLYGESFKGQVGSSWAHSFVSSSGKPASSLTKDADEKSLSIKAGNDSS 420

[Close]

BLAST of CmaCh13G003380 vs. NCBI nr
Match: gi|802614755|ref|XP_012074819.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curcas])

HSP 1 Score: 517.3 bits (1331), Expect = 4.5e-143
Identity = 283/437 (64.76%), Postives = 322/437 (73.68%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGR+GL+RFKKAQ+ EPFSVTVNST   + Q + K      VQY  S++   Q+ +QHQ
Sbjct: 1   MYGRAGLERFKKAQSSEPFSVTVNSTPKTTTQQAPKTVTHSSVQYLHSQT---QTQNQHQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
           ++  +K  GPEAGPLVGQTQQ TQVGG QSTWQPPDWAIEPR+GVYYLEVLKDGEV+DRI
Sbjct: 61  TYVPQKPAGPEAGPLVGQTQQLTQVGGGQSTWQPPDWAIEPRSGVYYLEVLKDGEVLDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           NLDRRRHIFGRQ HTCDFVLDHQSVSRQHAAVIPHKNGSI+VIDLGSAHGTFVANERLTK
Sbjct: 121 NLDRRRHIFGRQSHTCDFVLDHQSVSRQHAAVIPHKNGSIFVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           D PVELE GQSLRFAASTRTYILRKN+AALF RPP P++ +LPPPPDPSDEEAVV+YNTL
Sbjct: 181 DVPVELEVGQSLRFAASTRTYILRKNDAALFTRPPPPSEINLPPPPDPSDEEAVVAYNTL 240

Query: 241 LNRLGLT---------KSGLPSSSEDNNPAIAKDAQHGRPTKKLRKMRVAFRDQLGGELV 300
           +NR GL+         KSG  SS+ D+N       Q GR  K+++K RVAFRDQ+GGELV
Sbjct: 241 INRYGLSNPDLLSKSGKSGSSSSTRDDN------QQSGRAAKRMKKTRVAFRDQVGGELV 300

Query: 301 EVVGFSDGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT-- 360
           EVVG SDGADV TEPGPIGVKEGSLVGKYESLVQTT+IPKGKEQSS + ++     VT  
Sbjct: 301 EVVGISDGADVETEPGPIGVKEGSLVGKYESLVQTTVIPKGKEQSSAKENSASQAAVTNK 360

Query: 361 --------------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKASTENH 400
                                     G VGSSWAYSS  +  KP  P +    +++    
Sbjct: 361 LQEVLNKVRTPPKSGMYDDLYGEAFSGKVGSSWAYSSVNSGTKPDPPIKDDAQQSALSGK 420

[Close]

BLAST of CmaCh13G003380 vs. NCBI nr
Match: gi|743893789|ref|XP_011040136.1| (PREDICTED: nuclear inhibitor of protein phosphatase 1 [Populus euphratica])

HSP 1 Score: 517.3 bits (1331), Expect = 4.5e-143
Identity = 278/430 (64.65%), Postives = 323/430 (75.12%), Query Frame = 1


Query: 1   MYGRSGLDRFKKAQTLEPFSVTVNSTSHDSAQSSGKEGIQPLVQYSQSRSSHFQSIDQHQ 60
           MYGR+GL+RFKKAQ+ EPFSV+VNS    + Q +     QP VQYSQS++   QS  + Q
Sbjct: 1   MYGRAGLERFKKAQSTEPFSVSVNSAPKTATQPAVNTVSQPSVQYSQSKT---QSQFRDQ 60

Query: 61  SHDSKKLTGPEAGPLVGQTQQSTQVGGSQSTWQPPDWAIEPRAGVYYLEVLKDGEVIDRI 120
            + ++K   PEAGPL+G TQ  TQVGG QSTWQPPDWAIEPR GVYYLEVLKDGEV+DRI
Sbjct: 61  PYVAQKPAVPEAGPLLGHTQPVTQVGGGQSTWQPPDWAIEPRPGVYYLEVLKDGEVLDRI 120

Query: 121 NLDRRRHIFGRQFHTCDFVLDHQSVSRQHAAVIPHKNGSIYVIDLGSAHGTFVANERLTK 180
           +LDRRRHIFGRQ HTCDFVLDHQSVSRQHAAVIPHKNGSI+VIDLGSAHGTFVANERLTK
Sbjct: 121 SLDRRRHIFGRQIHTCDFVLDHQSVSRQHAAVIPHKNGSIFVIDLGSAHGTFVANERLTK 180

Query: 181 DSPVELEAGQSLRFAASTRTYILRKNNAALFARPPLPTDFDLPPPPDPSDEEAVVSYNTL 240
           D+PVELEAGQSLRFAASTRTYILRKN+AALF RPP P++ +LPPPPDPSDEEAVV+YNT 
Sbjct: 181 DTPVELEAGQSLRFAASTRTYILRKNDAALFPRPPPPSEINLPPPPDPSDEEAVVAYNTF 240

Query: 241 LNRLGLTKSGLPSSSEDNNPAIAK---DAQHGRPTKKLRKMRVAFRDQLGGELVEVVGFS 300
           LNR GLTK   P+ S +++ ++++     Q GR  K+++K RVAFRDQ+GGELV+VVGFS
Sbjct: 241 LNRYGLTKPDQPTKSSESSGSLSRRHDGQQLGRAAKRIKKTRVAFRDQVGGELVQVVGFS 300

Query: 301 DGADVGTEPGPIGVKEGSLVGKYESLVQTTIIPKGKEQSSLRGDNICPKGVT-------- 360
           DGADV TEPGPIGVKEGSLVGKYESLVQ T+IPKGKEQ S +  N   KGVT        
Sbjct: 301 DGADVETEPGPIGVKEGSLVGKYESLVQVTVIPKGKEQFSAKEHNASQKGVTSRLQEVLN 360

Query: 361 --------------------GNVGSSWAYSSSGTANKPSSPPEVSIGKA--STENHEENN 398
                               G VGSSWAYSS  +A   +SP +   G A  +     ENN
Sbjct: 361 KVKTTTKSGMYDDLYGESFAGKVGSSWAYSSDSSAGNLASPTKDGQGNAIGTLSGKPENN 420

The following BLAST results are available for this feature:

BLAST of CmaCh13G003380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP1R8_HUMAN	1.1e-19	29.12	Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens GN=PPP1R8 PE=1 SV=2	[more]
PP1R8_MOUSE	1.1e-19	29.12	Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus GN=Ppp1r8 PE=1 SV=1	[more]
PP1R8_BOVIN	1.1e-19	29.12	Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8 PE=1 SV=1	[more]
NADAP_HUMAN	3.5e-10	28.28	Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1	[more]
SNIP1_RAT	1.2e-07	28.03	Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1 PE=1 SV=1	[more]

BLAST of CmaCh13G003380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVY0_CUCSA	1.2e-195	84.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G170010 PE=4 SV=1	[more]
A0A067KUL3_JATCU	3.2e-143	64.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08977 PE=4 SV=1	[more]
U5G552_POPTR	1.9e-140	63.66	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s00500g PE=4 SV=1	[more]
W9RA39_9ROSA	5.6e-140	62.79	Nuclear inhibitor of protein phosphatase 1 OS=Morus notabilis GN=L484_017941 PE=...	[more]
B9SGC5_RICCO	3.4e-137	64.12	Nuclear inhibitor of protein phosphatase-1, putative OS=Ricinus communis GN=RCOM...	[more]

BLAST of CmaCh13G003380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G47790.1	1.3e-103	65.88	SMAD/FHA domain-containing protein	[more]
AT5G07900.1	1.1e-62	40.25	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.3e-52	34.14	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.8e-36	30.35	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	3.1e-25	31.30	Mitochondrial transcription termination factor family protein	[more]

BLAST of CmaCh13G003380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443484\|ref\|XP_004139507.1\|	1.7e-195	84.11	PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis sativus]	[more]
gi\|659118084\|ref\|XP_008458942.1\|	2.1e-193	83.18	PREDICTED: nuclear inhibitor of protein phosphatase 1 [Cucumis melo]	[more]
gi\|1009107576\|ref\|XP_015880422.1\|	1.2e-143	64.42	PREDICTED: nuclear inhibitor of protein phosphatase 1 [Ziziphus jujuba]	[more]
gi\|802614755\|ref\|XP_012074819.1\|	4.5e-143	64.76	PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curca...	[more]
gi\|743893789\|ref\|XP_011040136.1\|	4.5e-143	64.65	PREDICTED: nuclear inhibitor of protein phosphatase 1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000253	FHA_dom
IPR003690	MTERF
IPR008984	SMAD_FHA_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003690	double-stranded DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G003380.1	CmaCh13G003380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000253	Forkhead-associated (FHA) domain	GENE3D	G3DSA:2.60.200.20		coord: 102..207 score: 5.2
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 128..194 score: 2.2
IPR000253	Forkhead-associated (FHA) domain	SMART	SM00240	FHA_2	coord: 126..178 score: 8.7
IPR000253	Forkhead-associated (FHA) domain	PROFILE	PS50006	FHA_DOMAIN	coord: 127..178 score: 13
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 464..615 score: 6.5E-22coord: 629..735 score: 1.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 652..683 score: 0.32coord: 684..718 score: 2.4coord: 476..507 score: 3.2E-5coord: 512..543 score: 6.2coord: 583..613 score: 72.0coord: 548..578 score: 16
IPR008984	SMAD/FHA domain	unknown	SSF49879	SMAD/FHA domain	coord: 75..205 score: 1.28
None	No IPR available	unknown	Coil	Coil	coord: 751..763 scor
None	No IPR available	PANTHER	PTHR23308	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	coord: 1..713 score: 5.3E
None	No IPR available	PANTHER	PTHR23308:SF33	SUBFAMILY NOT NAMED	coord: 1..713 score: 5.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G003380	Cucsa.319540	Cucumber (Gy14) v1	cgycmaB0883
CmaCh13G003380	Cla011029	Watermelon (97103) v1	cmawmB202
CmaCh13G003380	Csa1G170010	Cucumber (Chinese Long) v2	cmacuB210
CmaCh13G003380	ClCG01G011480	Watermelon (Charleston Gray)	cmawcgB180
CmaCh13G003380	CSPI01G15180	Wild cucumber (PI 183967)	cmacpiB212
CmaCh13G003380	CmoCh13G003600	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G003380	Lsi02G011830	Bottle gourd (USVL1VR-Ls)	cmalsiB204
CmaCh13G003380	Cp4.1LG20g06730	Cucurbita pepo (Zucchini)	cmacpeB236
CmaCh13G003380	CsaV3_1G015300	Cucumber (Chinese Long) v3	cmacucB0253
CmaCh13G003380	Cla97C01G011120	Watermelon (97103) v2	cmawmbB208
CmaCh13G003380	Bhi08G000582	Wax gourd	cmawgoB0260

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh13G003380	CmaCh18G006320	Cucurbita maxima (Rimu)	cmacmaB211

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G003380	Cucurbita moschata (Rifu)	cmacmoB220
CmaCh13G003380	Wild cucumber (PI 183967)	cmacpiB222
CmaCh13G003380	Cucumber (Chinese Long) v2	cmacuB222
CmaCh13G003380	Cucurbita pepo (Zucchini)	cmacpeB209
CmaCh13G003380	Cucumber (Gy14) v2	cgybcmaB068
CmaCh13G003380	Cucumber (Gy14) v2	cgybcmaB078