CmaCh13G002210 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTTCTCCTCCTTTCATGGCTACCCTCTATTGTATGTTTCTTATGTTTTCTTCCAATTCGGACACTCAAAGCTCGGAAGCATCCACAAGAGCTCAAAGTTTTCTACCACTTGCTTTATGTGTCCATAGAGATAGCGGTTTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTCTCTCAGGTTGGCTATGTCGGTGGCATCGCGGTCATCGTCGTCTTAATCTGGTTTCCCCTTTTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGGTAAACAAACCATGAATCCTTCTGTTGTTGTTTCGGTTCCCCGTGAGCAACTTGAAGAAATTTCAAAACTTTCTTTGCCGAGTGTCTCAAATGTATGTAAGGAACCGTAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTTTAAGCAAAGATATTTCTCTTATTTTCATAGCAACAGTTTTTGTATGTGGGTCGTCCGTTGCAACCATTGACAATCTTGGGCAGATCGCCGAGTCACTTAAATATCCAAATCATTCCATAAGTATTCTGGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCAGTTTCATTTCTAAAACCCTTACGACCAAATACAAATTACCTCATCCTTTCATGTTCGGTCTTACCCAACTTTTCACCTGCACTAGCTTGCTCTCCATCACCTTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTGGGTTTTGCAAAGGGACCTCTAAACTCCATTGATATTCGTCATAATCTCTAATCTCTTCGGCCTCAAACATTACTCAACACTTCTCAACTGTGGGCAACTGGCTGTCCCACTTGGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTAAGATGCCGAAGCCACTAAAATTGGAAATGTGAAGAACGGGAAGGGCCTAACTTGCACTGGAACTCATTGCTTTAGTGAATCGTTCTTGATTTTGGCTGTAGTGACTTTGTTTGGAGCGATGGCTTCATTTGTGCTAGCTTATAGAACTCGAGAGTTCTACAAAGATGATGTATATAAGAAATACAGAGATGACATGGAGGCTACACCGTCAAAGTGGAATTAA ATGGATCTTCTCCTCCTTTCATGGCTACCCTCTATTGTATGTTTCTTATGTTTTCTTCCAATTCGGACACTCAAAGCTCGGAAGCATCCACAAGAGCTCAAAGTTTTCTACCACTTGCTTTATGTGTCCATAGAGATAGCGGTTTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTCTCTCAGGTTGGCTATGTCGGTGGCATCGCGGTCATCGTCGTCTTAATCTGGTTTCCCCTTTTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGGTAAACAAACCATGAATCCTTCTGTTGTTGTTTCGGTTCCCCGTGAGCAACTTGAAGAAATTTCAAAACTTTCTTTGCCGATTTTTGTATGTGGGTCGTCCGTTGCAACCATTGACAATCTTGGGCAGATCGCCGAGTCACTTAAATATCCAAATCATTCCATAATGACTTTGTTTGGAGCGATGGCTTCATTTGTGCTAGCTTATAGAACTCGAGAGTTCTACAAAGATGATGTATATAAGAAATACAGAGATGACATGGAGGCTACACCGTCAAAGTGGAATTAA ATGGATCTTCTCCTCCTTTCATGGCTACCCTCTATTGTATGTTTCTTATGTTTTCTTCCAATTCGGACACTCAAAGCTCGGAAGCATCCACAAGAGCTCAAAGTTTTCTACCACTTGCTTTATGTGTCCATAGAGATAGCGGTTTTCCTCTTGTTTCTCACCATAACCCAGAGAAACATTGCTTTCTCTCAGGTTGGCTATGTCGGTGGCATCGCGGTCATCGTCGTCTTAATCTGGTTTCCCCTTTTGATAGCTATTAAAGAAGAACTTTTTCTCTTCAAACTCGGTAAACAAACCATGAATCCTTCTGTTGTTGTTTCGGTTCCCCGTGAGCAACTTGAAGAAATTTCAAAACTTTCTTTGCCGATTTTTGTATGTGGGTCGTCCGTTGCAACCATTGACAATCTTGGGCAGATCGCCGAGTCACTTAAATATCCAAATCATTCCATAATGACTTTGTTTGGAGCGATGGCTTCATTTGTGCTAGCTTATAGAACTCGAGAGTTCTACAAAGATGATGTATATAAGAAATACAGAGATGACATGGAGGCTACACCGTCAAAGTGGAATTAA MDLLLLSWLPSIVCFLCFLPIRTLKARKHPQELKVFYHLLYVSIEIAVFLLFLTITQRNIAFSQVGYVGGIAVIVVLIWFPLLIAIKEELFLFKLGKQTMNPSVVVSVPREQLEEISKLSLPIFVCGSSVATIDNLGQIAESLKYPNHSIMTLFGAMASFVLAYRTREFYKDDVYKKYRDDMEATPSKWN
BLAST of CmaCh13G002210 vs. TrEMBL
Match: A0A0A0LUW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097645 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.1e-43 Identity = 110/213 (51.64%), Postives = 137/213 (64.32%), Query Frame = 1
BLAST of CmaCh13G002210 vs. TrEMBL
Match: A0A0A0LVD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097660 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-34 Identity = 95/197 (48.22%), Postives = 121/197 (61.42%), Query Frame = 1
BLAST of CmaCh13G002210 vs. TrEMBL
Match: M5WK77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003535mg PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-19 Identity = 66/193 (34.20%), Postives = 102/193 (52.85%), Query Frame = 1
BLAST of CmaCh13G002210 vs. TrEMBL
Match: M5W2C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022835mg PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.9e-19 Identity = 69/193 (35.75%), Postives = 99/193 (51.30%), Query Frame = 1
BLAST of CmaCh13G002210 vs. TrEMBL
Match: A0A0A0LUU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G096085 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.0e-18 Identity = 55/119 (46.22%), Postives = 78/119 (65.55%), Query Frame = 1
BLAST of CmaCh13G002210 vs. TAIR10
Match: AT2G28120.1 (AT2G28120.1 Major facilitator superfamily protein) HSP 1 Score: 79.0 bits (193), Expect = 3.6e-15 Identity = 57/193 (29.53%), Postives = 94/193 (48.70%), Query Frame = 1
BLAST of CmaCh13G002210 vs. TAIR10
Match: AT2G39210.1 (AT2G39210.1 Major facilitator superfamily protein) HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13 Identity = 39/110 (35.45%), Postives = 67/110 (60.91%), Query Frame = 1
BLAST of CmaCh13G002210 vs. NCBI nr
Match: gi|449459154|ref|XP_004147311.1| (PREDICTED: uncharacterized protein LOC101204873 [Cucumis sativus]) HSP 1 Score: 183.7 bits (465), Expect = 3.0e-43 Identity = 110/213 (51.64%), Postives = 137/213 (64.32%), Query Frame = 1
BLAST of CmaCh13G002210 vs. NCBI nr
Match: gi|659072282|ref|XP_008464760.1| (PREDICTED: uncharacterized protein LOC103502564 [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 2.5e-42 Identity = 110/213 (51.64%), Postives = 135/213 (63.38%), Query Frame = 1
BLAST of CmaCh13G002210 vs. NCBI nr
Match: gi|659072278|ref|XP_008464731.1| (PREDICTED: uncharacterized protein LOC103502544 [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40 Identity = 102/193 (52.85%), Postives = 124/193 (64.25%), Query Frame = 1
BLAST of CmaCh13G002210 vs. NCBI nr
Match: gi|449459156|ref|XP_004147312.1| (PREDICTED: uncharacterized membrane protein YMR155W-like [Cucumis sativus]) HSP 1 Score: 159.8 bits (403), Expect = 4.6e-36 Identity = 97/192 (50.52%), Postives = 119/192 (61.98%), Query Frame = 1
BLAST of CmaCh13G002210 vs. NCBI nr
Match: gi|700209691|gb|KGN64787.1| (hypothetical protein Csa_1G097660 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 1.9e-34 Identity = 95/197 (48.22%), Postives = 121/197 (61.42%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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