CmaCh13G002180 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G002180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Major facilitator superfamily protein
Location	Cma_Chr13 : 1722513 .. 1723397 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCTTCCGTTAGTGTTTCGATTCCCAACGAGCAACTTGAGGAAATTTTAGAAATTTCTTTGACTAGTGTCTCAAATGTATGTAAGAAGCCGCAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTCTAAGTAAATATATGATTCTTATTTTTATAGCAACGGTTTCTGCATGTGGGTCCTCCTATGCAGCCATTGACAATCTTAGGCAGATCGCCGAGTCACTGAAATATCCAAATCATTCCATAAGTATACTAGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTGTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTTGGTCTTACCCAACTTTTCACCTGCACCAGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTCGGTTTGGCCTTGGAACCCAAACTCCATTGATATTCGCCATAATCTTTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTCAGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGAAAGGGCCTAACTTGCACCGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTACACTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTTTACAAAGGCAATGTTTATAAGAAATACAGAGATGACATAGAGATTACACAGTCGAACGTGGAATTATATTCTTCCGATGATAAGAACAATGAACACAAAAAGAAAACTGATGATCCAATTAAATAA

mRNA sequence

ATGAATCCTTCCGTTAGTGTTTCGATTCCCAACGAGCAACTTGAGGAAATTTTAGAAATTTCTTTGACTAGTGTCTCAAATGTATGTAAGAAGCCGCAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTCTAAGTAAATATATGATTCTTATTTTTATAGCAACGGTTTCTGCATGTGGGTCCTCCTATGCAGCCATTGACAATCTTAGGCAGATCGCCGAGTCACTGAAATATCCAAATCATTCCATAAGTATACTAGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTGTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTTGGTCTTACCCAACTTTTCACCTGCACCAGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTCGGTTTGGCCTTGGAACCCAAACTCCATTGATATTCGCCATAATCTTTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTCAGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGAAAGGGCCTAACTTGCACCGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTACACTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTTTACAAAGGCAATGTTTATAAGAAATACAGAGATGACATAGAGATTACACAGTCGAACGTGGAATTATATTCTTCCGATGATAAGAACAATGAACACAAAAAGAAAACTGATGATCCAATTAAATAA

Coding sequence (CDS)

ATGAATCCTTCCGTTAGTGTTTCGATTCCCAACGAGCAACTTGAGGAAATTTTAGAAATTTCTTTGACTAGTGTCTCAAATGTATGTAAGAAGCCGCAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTCTTCTAAGTAAATATATGATTCTTATTTTTATAGCAACGGTTTCTGCATGTGGGTCCTCCTATGCAGCCATTGACAATCTTAGGCAGATCGCCGAGTCACTGAAATATCCAAATCATTCCATAAGTATACTAGTTTCATGGATTTCCATATTCAATTTCTTTGGTCGGGTCTTCTCCGGTTTCATCTGTGAAACCCTTATGACCAAATACAAATTACCTCGCCCTTTCATGTTTGGTCTTACCCAACTTTTCACCTGCACCAGCTTGCTCTCCATCGCATTCCCTTATATAAATTCAGTCTATGTAGCTTCGTTGATCATTCGGTTTGGCCTTGGAACCCAAACTCCATTGATATTCGCCATAATCTTTGATCTCTTCGGCCTCAAACATTACTCGACACTGCTCAACTGTGGGCAACTGGCTGTCCCACTCAGATCTTATATAATGAACGTGGAAGTAATAGGGAGGTTTTACGATGCAGAAGCCACTAAAATTGGAAATGTGAAGAACGGAAAGGGCCTAACTTGCACCGGAACTCATTGCTTTAGTGAATCGTTCATGATTTTGGCTACACTGACTTTGTTTGGAGCGATGGCTTCGTTTGTGCTAGCTTATAGAACTCGAGACTTTTACAAAGGCAATGTTTATAAGAAATACAGAGATGACATAGAGATTACACAGTCGAACGTGGAATTATATTCTTCCGATGATAAGAACAATGAACACAAAAAGAAAACTGATGATCCAATTAAATAA

Protein sequence

MNPSVSVSIPNEQLEEILEISLTSVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKKYRDDIEITQSNVELYSSDDKNNEHKKKTDDPIK

Homology

[Close]

BLAST of CmaCh13G002180 vs. TrEMBL
Match: A0A0A0LUW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097645 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.5e-106
Identity = 208/294 (70.75%), Postives = 237/294 (80.61%), Query Frame = 1


Query: 2   NPSVSVSIPNEQLEEILEISL--TSVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSA 61
           +PSV VSIP  +LEE+ E S   +  +NV  KPQRG+DF ILQAL SK M LIFIATVSA
Sbjct: 281 DPSVVVSIPVLKLEEVAETSSPPSFSNNVSNKPQRGDDFGILQALFSKDMALIFIATVSA 340

Query: 62  CGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPF 121
           CGSS AAIDNL QIAESL YP+ SI++ VSWISIFNFFGRV SGFI ETLMTKYKLPRP 
Sbjct: 341 CGSSVAAIDNLGQIAESLNYPSKSINVFVSWISIFNFFGRVCSGFISETLMTKYKLPRPL 400

Query: 122 MFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLN 181
           MFGLTQ+ TC  L++IAFP+ NS+Y ASLI+ FG G QTPL+FA+I DLFGLKHYSTLLN
Sbjct: 401 MFGLTQIITCIGLVAIAFPFKNSIYAASLIVGFGFGAQTPLLFALISDLFGLKHYSTLLN 460

Query: 182 CGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFG 241
           CGQLAVP  SYIMN+ V+G+ YD EATK GNVK GKGLTCTG HCFS+SF IL   TLFG
Sbjct: 461 CGQLAVPFGSYIMNIHVVGKLYDREATKNGNVKTGKGLTCTGIHCFSKSFTILVIATLFG 520

Query: 242 AMASFVLAYRTRDFYKGNVYKKYRDD--IEITQSNVELYSSDDKNNEHKKKTDD 292
           AMASFVLAYRTR+FYKG++YK+YRDD     TQS+VEL+SS D  N+  K  D+
Sbjct: 521 AMASFVLAYRTREFYKGDIYKRYRDDQMWTTTQSDVELFSSSD--NKKMKNCDE 572

[Close]

BLAST of CmaCh13G002180 vs. TrEMBL
Match: Q9ZUV4_ARATH (At2g28120/F24D13.9 OS=Arabidopsis thaliana GN=At2g28120 PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.3e-68
Identity = 140/247 (56.68%), Postives = 173/247 (70.04%), Query Frame = 1


Query: 26  SNVCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSIS 85
           S V   P RGED++ILQALLS  MI++F+AT    GSS  A+DNL QI ESL YPNH++S
Sbjct: 313 STVFSPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVS 372

Query: 86  ILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYV 145
             VS +SI+N+FGRVFSGF+ E L+ KYKLPRP M  L  L +C   L IAFP   SVY+
Sbjct: 373 SFVSLVSIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYI 432

Query: 146 ASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEA 205
           AS+++ F  G Q PL+FAII +LFGLK+YSTL NCGQLA PL SYI+NV V G  YD EA
Sbjct: 433 ASILMGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEA 492

Query: 206 TKIGNV-----KNGKGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYK 265
            K         K+ K LTC G+ C+   F+ILA +T FGA+ S  LA RTR+FYKG++YK
Sbjct: 493 LKQLTARGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYK 552

Query: 266 KYRDDIE 268
           K+R+  E
Sbjct: 553 KFRESPE 559

[Close]

BLAST of CmaCh13G002180 vs. TrEMBL
Match: A0A0K9QDC9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_192070 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-68
Identity = 139/261 (53.26%), Postives = 179/261 (68.58%), Query Frame = 1


Query: 28  VCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISIL 87
           +C KP+RGED++ILQALLS  M ++F++T+   GSS  A+DNL QI ESL YPN +IS  
Sbjct: 326 ICNKPERGEDYTILQALLSMDMGILFLSTLCGLGSSLTAVDNLGQIGESLGYPNKTISSF 385

Query: 88  VSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVAS 147
           VS +SI+N+FGRVF+GF+ E L+ K+K+PRP M  L  +  C   L IAFP   SVY+AS
Sbjct: 386 VSLVSIWNYFGRVFAGFVSEALLAKWKIPRPLMLTLVLMLACVGHLLIAFPIPGSVYIAS 445

Query: 148 LIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATK 207
           +II F  G Q PL+FAII +LFGLK+YSTL NCGQLA PL SYI+NV+V G  YD  A K
Sbjct: 446 VIIGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVKVTGMLYDKAALK 505

Query: 208 IGNVKNG------KGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKK 267
               K G      K LTC G+HC+  SF++LA +T FGA+ SF+L  RTR+FYKG++YKK
Sbjct: 506 -ELAKKGLKRSDVKELTCLGSHCYRLSFIVLACVTFFGALVSFILVVRTREFYKGDIYKK 565

Query: 268 YRDDIEITQSNVELYSSDDKN 283
           +R+  E       L   +  N
Sbjct: 566 FREQAEAADKEKALVPVNTNN 585

[Close]

BLAST of CmaCh13G002180 vs. TrEMBL
Match: D7LIF1_ARALL (Nodulin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481697 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 139/245 (56.73%), Postives = 172/245 (70.20%), Query Frame = 1


Query: 28  VCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISIL 87
           V   P RGED++ILQALLS  MI++F+AT    GSS  A+DNL QI ESL YPNH++S  
Sbjct: 315 VFSPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVSSF 374

Query: 88  VSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVAS 147
           VS +SI+N+FGRVFSGF+ E L+ KYKLPRP M  L  L +C   L IAFP   SVY+AS
Sbjct: 375 VSLVSIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYIAS 434

Query: 148 LIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATK 207
           +++ F  G Q PL+FAII +LFGLK+YSTL NCGQLA PL SYI+NV V G  YD EA K
Sbjct: 435 ILMGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDREALK 494

Query: 208 IGNV-----KNGKGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKKY 267
                    K+ K LTC G+ C+   F+ILA +T FGA+ S  LA RTR+FYKG++YKK+
Sbjct: 495 QLTARGLTRKDVKDLTCLGSQCYKLPFVILAAVTFFGALVSLGLAIRTREFYKGDIYKKF 554

[Close]

BLAST of CmaCh13G002180 vs. TrEMBL
Match: A0A0J8BQT8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205740 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.7e-68
Identity = 139/249 (55.82%), Postives = 176/249 (70.68%), Query Frame = 1


Query: 28  VCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISIL 87
           +C KP+RG+D++ILQA+ S  M ++F+AT+   G+S  A+DNL QI ESL YP  +IS  
Sbjct: 333 ICNKPERGDDYTILQAIFSIDMGILFLATLCGLGASLTAVDNLGQIGESLGYPTKTISSF 392

Query: 88  VSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVAS 147
           VS +SI+N+FGRVF+GF+ ETL+ K+K PRP M  L  L  C   L IAFP   SVYVAS
Sbjct: 393 VSLVSIWNYFGRVFAGFVSETLLAKWKFPRPLMMTLILLLACVGHLLIAFPIPGSVYVAS 452

Query: 148 LIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATK 207
           +II F  G Q PL+FAII +LFGLK+YSTL NCGQLA PL SYI+NV+V G  YD EA K
Sbjct: 453 VIIGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVKVTGMLYDKEALK 512

Query: 208 IGNVKNG------KGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKK 267
               K G      K LTC GT C+  SF+ILA +T+FGA+ SF+L  RTR+FYKG++YKK
Sbjct: 513 -ELAKRGLKRSDVKELTCLGTRCYRLSFIILAGVTIFGALISFILVIRTREFYKGDIYKK 572

Query: 268 YRDDIEITQ 271
           +R+  E  Q
Sbjct: 573 FREQAEAAQ 580

[Close]

BLAST of CmaCh13G002180 vs. TAIR10
Match: AT2G28120.1 (AT2G28120.1 Major facilitator superfamily protein)

HSP 1 Score: 268.1 bits (684), Expect = 6.5e-72
Identity = 140/247 (56.68%), Postives = 173/247 (70.04%), Query Frame = 1


Query: 26  SNVCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSIS 85
           S V   P RGED++ILQALLS  MI++F+AT    GSS  A+DNL QI ESL YPNH++S
Sbjct: 313 STVFSPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVS 372

Query: 86  ILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYV 145
             VS +SI+N+FGRVFSGF+ E L+ KYKLPRP M  L  L +C   L IAFP   SVY+
Sbjct: 373 SFVSLVSIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYI 432

Query: 146 ASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEA 205
           AS+++ F  G Q PL+FAII +LFGLK+YSTL NCGQLA PL SYI+NV V G  YD EA
Sbjct: 433 ASILMGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEA 492

Query: 206 TKIGNV-----KNGKGLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYK 265
            K         K+ K LTC G+ C+   F+ILA +T FGA+ S  LA RTR+FYKG++YK
Sbjct: 493 LKQLTARGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREFYKGDIYK 552

Query: 266 KYRDDIE 268
           K+R+  E
Sbjct: 553 KFRESPE 559

[Close]

BLAST of CmaCh13G002180 vs. TAIR10
Match: AT2G39210.1 (AT2G39210.1 Major facilitator superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-60
Identity = 123/260 (47.31%), Postives = 169/260 (65.00%), Query Frame = 1


Query: 12  EQLEEILEISLTSV--SNVCKKPQRGEDFSILQALLSKYMILIFIATVSACGSSYAAIDN 71
           E+ +E++E   T    + V   P+RG+D++ILQAL S  M+++F+AT+   G +  AIDN
Sbjct: 306 EESKEVVEKVKTPSCWTTVFNPPERGDDYTILQALFSVDMLILFLATICGVGGTLTAIDN 365

Query: 72  LRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTC 131
           L QI  SL YP  S+S  VS +SI+N++GRV SG + E  + KYK PRP M  +  L +C
Sbjct: 366 LGQIGNSLGYPKRSVSTFVSLVSIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSC 425

Query: 132 TSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRS 191
              L IAF     +YVAS+II F  G Q PL+FAII ++FGLK+YSTL N G +A P+ S
Sbjct: 426 AGHLLIAFNVPGGLYVASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGS 485

Query: 192 YIMNVEVIGRFYDAEATK----IGNVK-NGKGLTCTGTHCFSESFMILATLTLFGAMASF 251
           Y++NV V G  YD EA K    +G  +  G+ L C GT CF  SF+I+A +TLFG + S 
Sbjct: 486 YLLNVRVAGYLYDVEAGKQYKALGKTRVEGQDLNCIGTSCFKLSFIIIAAVTLFGVLVSM 545

Query: 252 VLAYRTRDFYKGNVYKKYRD 265
           VL  RT+ FYK ++YKK+R+
Sbjct: 546 VLVIRTKKFYKSDIYKKFRE 565

[Close]

BLAST of CmaCh13G002180 vs. TAIR10
Match: AT2G34355.1 (AT2G34355.1 Major facilitator superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-36
Identity = 83/226 (36.73%), Postives = 135/226 (59.73%), Query Frame = 1


Query: 36  EDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFN 95
           ED +IL+A+ +    L+F+A +   GS +A ++N+RQI ESL+Y +  ++ LVS  SI+N
Sbjct: 302 EDSNILEAMSTVNFWLLFLAMLCGMGSGFATVNNMRQIGESLRYSSVQLNSLVSLWSIWN 361

Query: 96  FFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLG 155
           F GR  +G++ +T + K+  PRP    +T        + +A     S+Y  S++I    G
Sbjct: 362 FLGRFGAGYVSDTFLHKHSWPRPIFMAITLGVMAIGHIIVASGVQGSLYAGSVLIGMAYG 421

Query: 156 TQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGK 215
           +Q  L+  I  ++FG++H  T+     +A P+ SYI++V+VIG FYD  A++  N     
Sbjct: 422 SQWSLMPTITSEIFGIRHMGTIYFTISIAGPIGSYILSVKVIGYFYDKVASEDDN----- 481

Query: 216 GLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKK 262
             +C G+ CF  SFMI+A++ LFG++ + VL +RT  FYK  V K+
Sbjct: 482 --SCFGSQCFRTSFMIMASVALFGSLVASVLFFRTHKFYKNLVAKR 520

[Close]

BLAST of CmaCh13G002180 vs. TAIR10
Match: AT1G74780.1 (AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 3.1e-34
Identity = 83/226 (36.73%), Postives = 131/226 (57.96%), Query Frame = 1


Query: 36  EDFSILQALLSKYMILIFIATVSACGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFN 95
           E+ ++LQA+      L+F+A +   GS  + I+N+RQI ESL+Y +  I+ LVS  SI+N
Sbjct: 311 ENLNLLQAMKKLSFWLLFLAMICGMGSGLSTINNIRQIGESLRYSSVEINSLVSLWSIWN 370

Query: 96  FFGRVFSGFICETLMTKYKLPRPFMFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLG 155
           F GR  +G+  + L+ K   PRP +   T        L IA  +  ++YV S+I+    G
Sbjct: 371 FLGRFGAGYASDALLHKKGWPRPLLMAATLGTMSIGHLIIASGFQGNLYVGSVIVGVCYG 430

Query: 156 TQTPLIFAIIFDLFGLKHYSTLLNCGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGK 215
           +Q  L+  I  +LFG++H  T+ N   +A P+ SYI +V +IG  YD  A       +G+
Sbjct: 431 SQWSLMPTITSELFGIRHMGTIFNTISVASPIGSYIFSVRLIGYIYDKTA-------SGE 490

Query: 216 GLTCTGTHCFSESFMILATLTLFGAMASFVLAYRTRDFYKGNVYKK 262
           G TC G+HCF  SF+I+A++  FG + + VL +RT+  Y+  + K+
Sbjct: 491 GNTCYGSHCFRLSFIIMASVAFFGFLVAIVLFFRTKTLYRQILVKR 529

[Close]

BLAST of CmaCh13G002180 vs. TAIR10
Match: AT2G34350.1 (AT2G34350.1 Nodulin-like / Major Facilitator Superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-32
Identity = 85/258 (32.95%), Postives = 140/258 (54.26%), Query Frame = 1


Query: 5   VSVSIPNEQLEEILEI-SLTSVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSACGSS 64
           +S+  P  +   +L+   L S S+V  K     D ++L+A+ +    L+F+A +   GS 
Sbjct: 274 LSLDFPVTERTTLLDSPKLNSSSDV--KDVMTNDMNVLEAICTTNFWLLFVAMICGMGSG 333

Query: 65  YAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFMFGL 124
            A I+N+RQ+ ESL+Y    ++ LVS  SI+NF GR  SG+I +T +  +  PRP    +
Sbjct: 334 LATINNIRQMGESLRYSTVQLNSLVSLWSIWNFLGRFGSGYISDTYLHSHGWPRPVFMAI 393

Query: 125 TQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNCGQL 184
           T        + +A   + S+Y+ SL++    G+Q  L+  I  ++FG+ H  T+     +
Sbjct: 394 TLGLMAIGHIVMASGLLGSLYIGSLLVGLAYGSQWSLMPTITSEIFGVLHMGTIFYTISI 453

Query: 185 AVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFGAMAS 244
           A P+ SY  +V+VIG  YD  A++  +       +C G HCF  SF+I+A + L G++ +
Sbjct: 454 ASPVGSYFFSVKVIGYLYDKVASEDDH-------SCYGNHCFRTSFLIMAAMALLGSLVA 513

Query: 245 FVLAYRTRDFYKGNVYKK 262
            VL  RT+ FY   V K+
Sbjct: 514 LVLLLRTKKFYATLVAKR 522

[Close]

BLAST of CmaCh13G002180 vs. NCBI nr
Match: gi|659072282|ref|XP_008464760.1| (PREDICTED: uncharacterized protein LOC103502564 [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 4.8e-109
Identity = 211/282 (74.82%), Postives = 240/282 (85.11%), Query Frame = 1


Query: 2   NPSVSVSIPNEQLEEILEISLT-SVS-NVCKKPQRGEDFSILQALLSKYMILIFIATVSA 61
           +PSV VSIP ++LEEI+E S + S+S N+  KPQRG+DF ILQALLSK M LIFIATVSA
Sbjct: 281 DPSVVVSIPVQKLEEIVETSSSPSLSDNLSNKPQRGDDFGILQALLSKDMALIFIATVSA 340

Query: 62  CGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPF 121
           CGSS AAIDNL QIAESL YP+ SIS+ VSWISIFNFFGRV SGF+ ETLMTKYKLPRP 
Sbjct: 341 CGSSVAAIDNLGQIAESLNYPSKSISVFVSWISIFNFFGRVCSGFVSETLMTKYKLPRPL 400

Query: 122 MFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLN 181
           +FGLTQ+ TC  L++IAFP+ NSVY ASLII FG G QTPL+FA+I DLFGLKHYSTLLN
Sbjct: 401 IFGLTQIITCIGLVAIAFPFNNSVYAASLIIGFGFGAQTPLLFALISDLFGLKHYSTLLN 460

Query: 182 CGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFG 241
           CGQLAVP  SYIMN+ V+GR YD EATKIGNVK GKGLTCTG HCFSESF IL  +TLFG
Sbjct: 461 CGQLAVPFGSYIMNIHVVGRLYDREATKIGNVKTGKGLTCTGIHCFSESFGILVIVTLFG 520

Query: 242 AMASFVLAYRTRDFYKGNVYKKYRDD-IEITQSNVELYSSDD 281
           AMASFVLAYRT++FYKG++YK+YRDD +  TQS+VEL+SS D
Sbjct: 521 AMASFVLAYRTKEFYKGDIYKRYRDDKMWTTQSDVELFSSSD 562

[Close]

BLAST of CmaCh13G002180 vs. NCBI nr
Match: gi|449459154|ref|XP_004147311.1| (PREDICTED: uncharacterized protein LOC101204873 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 6.5e-106
Identity = 208/294 (70.75%), Postives = 237/294 (80.61%), Query Frame = 1


Query: 2   NPSVSVSIPNEQLEEILEISL--TSVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSA 61
           +PSV VSIP  +LEE+ E S   +  +NV  KPQRG+DF ILQAL SK M LIFIATVSA
Sbjct: 281 DPSVVVSIPVLKLEEVAETSSPPSFSNNVSNKPQRGDDFGILQALFSKDMALIFIATVSA 340

Query: 62  CGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPF 121
           CGSS AAIDNL QIAESL YP+ SI++ VSWISIFNFFGRV SGFI ETLMTKYKLPRP 
Sbjct: 341 CGSSVAAIDNLGQIAESLNYPSKSINVFVSWISIFNFFGRVCSGFISETLMTKYKLPRPL 400

Query: 122 MFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLN 181
           MFGLTQ+ TC  L++IAFP+ NS+Y ASLI+ FG G QTPL+FA+I DLFGLKHYSTLLN
Sbjct: 401 MFGLTQIITCIGLVAIAFPFKNSIYAASLIVGFGFGAQTPLLFALISDLFGLKHYSTLLN 460

Query: 182 CGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFG 241
           CGQLAVP  SYIMN+ V+G+ YD EATK GNVK GKGLTCTG HCFS+SF IL   TLFG
Sbjct: 461 CGQLAVPFGSYIMNIHVVGKLYDREATKNGNVKTGKGLTCTGIHCFSKSFTILVIATLFG 520

Query: 242 AMASFVLAYRTRDFYKGNVYKKYRDD--IEITQSNVELYSSDDKNNEHKKKTDD 292
           AMASFVLAYRTR+FYKG++YK+YRDD     TQS+VEL+SS D  N+  K  D+
Sbjct: 521 AMASFVLAYRTREFYKGDIYKRYRDDQMWTTTQSDVELFSSSD--NKKMKNCDE 572

[Close]

BLAST of CmaCh13G002180 vs. NCBI nr
Match: gi|659072278|ref|XP_008464731.1| (PREDICTED: uncharacterized protein LOC103502544 [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 4.8e-101
Identity = 199/296 (67.23%), Postives = 231/296 (78.04%), Query Frame = 1


Query: 2   NPSVSVSIPNEQLEEILEISLTSV--SNVCKKPQRGEDFSILQALLSKYMILIFIATVSA 61
           +PSV VSIP ++LE+I E SL S   +N+   P+RGEDF ILQAL S  M LIFIATVSA
Sbjct: 278 DPSVVVSIPVQKLEQIPETSLPSSLSNNLSNNPKRGEDFGILQALFSVDMTLIFIATVSA 337

Query: 62  CGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPF 121
           CGSS A IDNL QIAESL YP  S+S+ +SWISIFNFFGRV SGF+ E  MTK+KLPRP 
Sbjct: 338 CGSSVAVIDNLGQIAESLNYPPQSVSVFISWISIFNFFGRVCSGFVSEYFMTKHKLPRPI 397

Query: 122 MFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLN 181
           +FGL+QL TC   L IAFPY  SVYVASLII FG G QTPL+F +I DLFGLKHYSTLLN
Sbjct: 398 IFGLSQLLTCIGFLFIAFPYTKSVYVASLIIGFGFGAQTPLLFTLISDLFGLKHYSTLLN 457

Query: 182 CGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFG 241
           CGQLAVP  SY+MNV V+GRFYD EA +IGNV+NGKGLTC G HCFSESF+IL  +TLFG
Sbjct: 458 CGQLAVPFGSYLMNVHVVGRFYDKEAIRIGNVQNGKGLTCNGAHCFSESFIILVGVTLFG 517

Query: 242 AMASFVLAYRTRDFYKGNVYKKYRDD-IEITQSNVELYSSDDKNNEHKKKTDDPIK 295
           AMASFVLAYRTR+FYKG++Y++YR+D + +TQ          K+ EH KK+DD  K
Sbjct: 518 AMASFVLAYRTREFYKGDIYERYREDQMWVTQ----------KDKEHTKKSDDGSK 563

[Close]

BLAST of CmaCh13G002180 vs. NCBI nr
Match: gi|449459156|ref|XP_004147312.1| (PREDICTED: uncharacterized membrane protein YMR155W-like [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 2.4e-100
Identity = 203/294 (69.05%), Postives = 232/294 (78.91%), Query Frame = 1


Query: 2   NPSVSVSIPNEQLEEILEISLT-SVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSAC 61
           +PSV VSIP ++LEEI E SL  S+SN    PQRGEDFSILQAL S  M LIFIAT+SAC
Sbjct: 278 DPSV-VSIPVQKLEEIPETSLPLSLSNNLSNPQRGEDFSILQALFSIDMTLIFIATISAC 337

Query: 62  GSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPFM 121
           GSS AAIDNL QIAESL YP  S+S+ VSWISIFNFFGRV SGF+ E  M+K+KLPRP  
Sbjct: 338 GSSVAAIDNLGQIAESLDYPPQSVSVFVSWISIFNFFGRVCSGFVSEYFMSKHKLPRPLF 397

Query: 122 FGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLNC 181
           FGL+QL TC  LL IAFP+  SVYVASLII FG G QTPL+F +I DLFGLKH+STLLNC
Sbjct: 398 FGLSQLLTCIGLLFIAFPHAKSVYVASLIIGFGFGAQTPLLFTLISDLFGLKHFSTLLNC 457

Query: 182 GQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFGA 241
           GQLAVP  SY+MNV V+GRFYD EA +IGNVKNGKGLTC G HCFSESF+IL  +T FGA
Sbjct: 458 GQLAVPFGSYLMNVHVVGRFYDMEAIRIGNVKNGKGLTCKGAHCFSESFIILVGVTTFGA 517

Query: 242 MASFVLAYRTRDFYKGNVYKKYRDDIEITQSNVELYSSDDKNNEHKKKTDDPIK 295
           MASFVLAYRTR+FYKG++YK+YRD+    Q  V+L     K+++H KK DD  K
Sbjct: 518 MASFVLAYRTREFYKGDIYKRYRDE----QMWVKL-----KDDQHTKKVDDGSK 561

[Close]

BLAST of CmaCh13G002180 vs. NCBI nr
Match: gi|449459150|ref|XP_004147309.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus])

HSP 1 Score: 346.7 bits (888), Expect = 4.1e-92
Identity = 177/282 (62.77%), Postives = 215/282 (76.24%), Query Frame = 1


Query: 4   SVSVSIPNEQLEEILEI----SLTSVSNVCKKPQRGEDFSILQALLSKYMILIFIATVSA 63
           S S +  NE L  I EI    S T  SN+  KP+RGEDFSILQAL SK M LIF+AT+  
Sbjct: 292 SSSTTKNNESLSPIEEIPELNSPTCCSNIVNKPERGEDFSILQALFSKDMGLIFVATLCG 351

Query: 64  CGSSYAAIDNLRQIAESLKYPNHSISILVSWISIFNFFGRVFSGFICETLMTKYKLPRPF 123
           CGSS AAIDN+ QI ESL YP+ SISI VSW+SIF+FFGRV SGFI ETLMTKYKLPRP 
Sbjct: 352 CGSSIAAIDNIGQIGESLGYPSKSISIFVSWVSIFSFFGRVGSGFISETLMTKYKLPRPL 411

Query: 124 MFGLTQLFTCTSLLSIAFPYINSVYVASLIIRFGLGTQTPLIFAIIFDLFGLKHYSTLLN 183
           MF  + L TC  +L +AFPY  S+YVASL I FG G Q P+IFAI+ +LFGLK+Y+T+ N
Sbjct: 412 MFAFSHLLTCIGMLFVAFPYPGSIYVASLTIGFGFGAQVPIIFAILSELFGLKYYATIFN 471

Query: 184 CGQLAVPLRSYIMNVEVIGRFYDAEATKIGNVKNGKGLTCTGTHCFSESFMILATLTLFG 243
           C QLAVP+ SY++NV+VIG+ YD EATK G +++G GLTC G HCFS SF++LA + L G
Sbjct: 472 CAQLAVPIGSYVLNVDVIGKLYDIEATKDGGIRDGNGLTCKGAHCFSGSFLVLAVVVLIG 531

Query: 244 AMASFVLAYRTRDFYKGNVYKKYRDDIEITQSNVELYSSDDK 282
            +AS VLA+RTR+FYKG+VYKKYR+D+ I QS++E Y  DDK
Sbjct: 532 GLASLVLAFRTRNFYKGDVYKKYREDMWIPQSDMEFYCLDDK 573

The following BLAST results are available for this feature:

BLAST of CmaCh13G002180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh13G002180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUW4_CUCSA	4.5e-106	70.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G097645 PE=4 SV=1	[more]
Q9ZUV4_ARATH	1.3e-68	56.68	At2g28120/F24D13.9 OS=Arabidopsis thaliana GN=At2g28120 PE=1 SV=1	[more]
A0A0K9QDC9_SPIOL	2.2e-68	53.26	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_192070 PE=4 SV=1	[more]
D7LIF1_ARALL	2.9e-68	56.73	Nodulin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481697 ...	[more]
A0A0J8BQT8_BETVU	3.7e-68	55.82	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g205740 PE=4 S...	[more]

BLAST of CmaCh13G002180 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28120.1	6.5e-72	56.68	Major facilitator superfamily protein	[more]
AT2G39210.1	2.0e-60	47.31	Major facilitator superfamily protein	[more]
AT2G34355.1	4.4e-36	36.73	Major facilitator superfamily protein	[more]
AT1G74780.1	3.1e-34	36.73	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT2G34350.1	1.7e-32	32.95	Nodulin-like / Major Facilitator Superfamily protein	[more]

BLAST of CmaCh13G002180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072282\|ref\|XP_008464760.1\|	4.8e-109	74.82	PREDICTED: uncharacterized protein LOC103502564 [Cucumis melo]	[more]
gi\|449459154\|ref\|XP_004147311.1\|	6.5e-106	70.75	PREDICTED: uncharacterized protein LOC101204873 [Cucumis sativus]	[more]
gi\|659072278\|ref\|XP_008464731.1\|	4.8e-101	67.23	PREDICTED: uncharacterized protein LOC103502544 [Cucumis melo]	[more]
gi\|449459156\|ref\|XP_004147312.1\|	2.4e-100	69.05	PREDICTED: uncharacterized membrane protein YMR155W-like [Cucumis sativus]	[more]
gi\|449459150\|ref\|XP_004147309.1\|	4.1e-92	62.77	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G002180.1	CmaCh13G002180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020846	Major facilitator superfamily domain	unknown	SSF103473	MFS general substrate transporter	coord: 30..252 score: 9.29
None	No IPR available	GENE3D	G3DSA:1.20.1250.20		coord: 46..248 score: 2.
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 11..267 score: 2.8E
None	No IPR available	PANTHER	PTHR21576:SF29	SUBFAMILY NOT NAMED	coord: 11..267 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G002180	Cucumber (Gy14) v1	cgycmaB0610
CmaCh13G002180	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G002180	Cucurbita moschata (Rifu)	cmacmoB226
CmaCh13G002180	Wild cucumber (PI 183967)	cmacpiB205
CmaCh13G002180	Cucumber (Chinese Long) v2	cmacuB203
CmaCh13G002180	Melon (DHL92) v3.5.1	cmameB194
CmaCh13G002180	Watermelon (Charleston Gray)	cmawcgB194
CmaCh13G002180	Watermelon (97103) v1	cmawmB185
CmaCh13G002180	Cucumber (Gy14) v2	cgybcmaB061
CmaCh13G002180	Melon (DHL92) v3.6.1	cmamedB215
CmaCh13G002180	Cucumber (Chinese Long) v3	cmacucB0234
CmaCh13G002180	Watermelon (97103) v2	cmawmbB225
CmaCh13G002180	Wax gourd	cmawgoB0267
CmaCh13G002180	Cucurbita maxima (Rimu)	cmacmaB220