CmaCh13G001390 (gene) Cucurbita maxima (Rimu)

NameCmaCh13G001390
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDNA binding protein
LocationCma_Chr13 : 971276 .. 978545 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAAAAGTTCAAAAGCGGAAGAGTACCCTAAAACCCTGAGGAGGGCCTTCTTCCCTGCTCCACTCCTCTCTGCTTCTTCTTCCTATTCCGATGGACTGAGGAACCACAATCTATGGTGAAAATGAGGATTAAGCTTCTTGCTGGAAGAGGACTCCACTCCAACTGTTCTTTCGAGCACTCTATTTCCGGCTTAAAATCGGGTATAAACCCTCTTCCTCTCCCTCTTTGATGACTGAAGCTATTTCAATCCGGCTTTGATTTGAATGGAATTATTCGGTTTTTATTTCATTGTCTATTAAGGCTTCATTAATCTTCTTCGTTTTGCAGCGTTCACTCGGAAAGACGTCGACAATTTTGTACCTACCCCAAATGCATGGTGGCGTGGAAGATCATATGCTGCCTCTGTTGCTTCAGATGTACCCCGTCCCGAGAAGGATCGTAAAAAAGTCTCTAGAGAAGATCGGCGAGCAATGGTCGAATCTTTTGTAGACAAGTATTTTCTTGTTTTCTCCTCATTTGAAATTCACTCTTTTTCTCTTTAGTTTTAACAATAAGAGCATCTATCATGACCATTAAGAAGACTGTGTATTACATTTACTACTACTGTTTACCTCAAGGAATTGGCATGTGTTCCTAGAAAGATATTCATTGCTCATACTCATAATGCAACCTGAGAAAAATAACTAATAATTGAAACTTTTTCCTGCTTATTTGTTTATGTTAATTGATTTCCGTTTTCATTTCAATATCATTTTCTTTTAACCTGATTACAGAATGTTCCATCTTTCAATATTGTACTTTGCTCACTGATCACATGGGAGTAATTCGATAGCTTTTGAATGTTTTAATGCATCCTCAGTTGCAAGCTTCTTTTTGCCCGTCAATTTGAAGAAATAATGTATTCATTTCTGTTTGGTTACCCTTTTTGTTGTCTGCAGGTGAGCAAGTTTTTTAAATTGCATCTAATACTTTCTTGGTAATTGAATTTTGGTGGTTCAATACTTGATTATTCCTTCTGCAGGTACAAGGCATCAAATACTGGAAAATTCCCTTCGATAACAGACACTATGAAACAAGTAGGTGGCTCATTTTATACTATTAGGAAAATCCTTCAGGAGCTTCAAAATGAATCTACAATGTCGTCCTTAACGAGTAAAAGTAAAAAGTCGTTTCGAGAAACAGAAATCAAAGGTAATAGAAGTTTAGCTGAAGATGTAAATTTTACCTTAAGTATTCCTGGTTTTTAGAAGGGTTTTAGTCTCTAAGAGTGAGAATCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTTGGCTTTTTGGCTTTTTGTTTCTTGCCTTCTTTAGATCACGAGAGATGCATGCCTCCATCAGCTTACCACATTCTATTTACTTTTTTGTCTCATTTTAGAGTCTTGAGTTCGATTGAAAAAGAGATGGTGAAACTCATGAGAGATTTCTTATGGGAGGGGGTGGATAGGGAAAGGTTTCACATCTGGTGAGATGAGATGGGATGGGAGGTGGTCTCTGGGCCTTTGGACCAGGAGAGTTTAGGCATTGGTAATGTTAGGACGAGAAACACAGTCTTGTTGGCTAAAAGTTGTGGTGATGTTGTTTTGAACCCAATACGTTGTGGCACAAGGTTATTGTTAGCAAGTACGAGCCCCATCCCATTGAATTGACTAGTGGGGAGTTAAAAGCCAATTCCAGAAACCTGAGGAAAAAAATTGCGACGGATCCTCCTTTTCTTTCTCAGTTAATTCATAATGTGGTGGGGGATGAACAAGATACTTGTTTTTGGAGGACAAGTGGTTGGGGATAGACTCGTTTGCTCCTTATACCTTTGCTTATACCACTGACCTTTTTCAGGAACCATTCGGTAGTATCAATCCTTAATTAGGTAAATTTGCCAGCTTCTCCTTCCTTGGGTCTCTGGCATCCATTGCCATCGGCAAACATCGGATGTCTTGACTATTTTATCCTTGCTTTCCTCTTTTCTCTTTAAGTCCAGGAGGGAGAATGTCTACCTTTGGACTCCTTGTCCATCCAAAGGTTTTTCTCATAGCTTATTCTTCCAGTGCTTGCCTATTTTATCCTCGCTTTCCTCTTTTATCTTTAAGTCGAGGAGGGAGAGTGTCAACCTTTGGACTCCTTGTCCATCCAAAGGTTTTTCTCATAGCTCATTCTTCCCGTGCTTTTCCAAGACCTCCTCGATGGGTGGTTCTATTTTCTCCTCAGGTTGGAAAGTGAAAATTTCCTAGAAGGTGAAGTTCTTCATGTGGTAGGTTTTACATGGAAGAAATAACACCTTGGATTAGATCTCAGCTAGAGGTCTTTGGTGGTTAGGTTGCTTTTCCCTATTCGTTATAGGAGGGTTGCATAGGACTTGGATCACATCTTGTGCTATGATTTTGCTCGTGTGGTCTTGCACAATTTCTTTGAGGTGTTCGGTTTTAGCTTTGTTGACTCTCAGAGTTGCAAGGAGTTGGTTGAGGCGCTTATTTTCCATCTGCCCTTTCATAATAAAAGGTGAGTTTTGTGGCAAGCTAAGATGTGTGCTATTTTGTGAGGGCGCTAGGGCAAGAGAAACAACAAAATCTTTAGAGGGCATGAGAGTGGTTGAAGAATCTTTTGCTGAATATCTAATATCATTATTTCAAGAATGTGAAAATGAGATTCCTAATCCTCCTTCCTCAGTGCTGCGGAAATTTGCATCACTTTTTGAAGCTTGTGGGAGTTTGTAGACAAGATAATGACGAAGAAGGGATTTGGTTCCAAATGGAGAGCTTGGATAGGGACTTGCCTCAGGAATGTCAACTGTTCCATTTTGGTCAATGGGAATCCAAGGGGTAGAACTTGTGCCTCTAGAGGAATTAGACAAGGTGACACCCTATCTCCGTTTATATTTCTTTTCCATTTTGATCAATGGGAATCCAAGGGGTACAACTTGTGCCTCTAGAGGAATTAGACAAGGTGACACCCTATCTCCTTTTATATTTCTTTTGGTGGTTGACATTTTGAGAAGAATGATCTTAAAAGGGGTGGAAGGTAATATTGTTAAGCTTTCAAGTTGGAAAGGACAAGGTTCACCTCTCATCTCTAGTTCGTTGTTGATAGTCTTCTTTTGCTATGGTAAAAGGGATTCCTTTCTCAAGCTCAATCATATTCGGGCTTTTTTTAGATTATCTCGAGCCTTAAGATTAATGGAGGTAAATGACAAATTTTGGGCATTAATTGTAACTCTTTCAAGCTCGAGAGGTGATCTAGCTTTGTGGGTTTTGATGTTGGGATTTTCCTTTCATCCTACTTAGGTTTTCCCGTAGGCCACTCCCCTAGAGGTCATTTCTTTTGGGACCCTGTCATTGGGAATGTAATGGCCCATGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCCTCTCAAGGTTTTTAAAACGCGTTTTCTAGGGAAAGGTTTCCACATCCTTATAAAGGGTGTTTCGTTCCCCTCTCCAACCAATGTGGGTTATCACAATCCACCCCCCTTCAACGTCCAACGTCCTTTCTGGCACATCGCCTGGTGTCTGGCTCGGATACCATTTGTAACAGCCTAGGCCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTTCCTTTCCGGCTTCCCCTCAAGGTTTTTAAAATGCGTCTGCTGGAAAGGTTTCCACACCCTTATAAAGGGTGTTTTGTTCTCTTCTCTAGTCAATGTGGGATATCACGGGGAAGATCAGCAAAAGGATCACTCTCTTATTCAATTGGTATTTCTACTTTATCTCTTCTTAGAGTTCCATGTTTGATTGGAAAGGAGGTGGAGAAGCTTAGGAGAGATTTCTTATGAGAGAGGCTAGAAGAAGGGAAGGGTTGCACCTGGTGCATTGGGAGGTGGTTTCTAGGCCCTCGGACTTAAGGGGGTTCAGTTATTGGTAATGTGAGAATGAGAAACACTAGCTTGCTAGCTAAATGGTTGTGGCAATTCTTTCATGAAGTCCATATCTTATGGCACAAGGTTATTGTTAAGAAATACGAGTCCCACCTTTTTGAGTGGATTGGTGTGGGTTTAAAAGACACTTTCAAAATCCCATGGAAAGTGATGGTAGCAAATATTCCTTTGCTTTCTCTATTTCTTCATAATGATTTTGAGGACGGGTGGATACCTATTGTTGGGAGGACAAGTGGCTGGGGGATAGACCCCTCTACTCCTTGTACCTTGTTTATATCCCTTATCTTCTCTGAGGAACCACTCAGTTGTTTCAATCCTTGGTCAGTCAGACTTATCATCGTCTCCTTCCTTGTGTGCTCGATGTTCATTGACCAATGAGGAAGCATCAGACTTCTCAACTCTACTTTTGTGCTTCTCCTCTTTTCGCTTTAAACCTGGGGTAGAGATTCTTGCCTTTTGAACTTGTGTCCTTCAAAAGATTTTCCTTGTAGTTCTTCTTCCAATGATTATCCAACCCATCCTTAGTGGGGGTTCTATTTTTTTCAGTTCTTCTTGTGGCAAGGGTTGCATGGAAGAGTTAACATCTTGAATCAGATTTTGGGTAGGTCTTTAGTGGTTGGGCTACTTTGTGTATTTTTGCAAGAAGAGAGTTGAGGACCTAGAGCATATCATGTGAAGCTGTGATTTTGCTCGTATTGTGTGGAGCAGTTTCTTTCAAGTATTCAGTTTTAGTTTTGTCACCCATCAAAGTTGCAGGAAGTTGTTGGATAAGCTTTTCCTCCATTTGCCTTTTTGTGATGAAAAGTGATTTTTGTGGCAGGTTGGGGTGTGTGCTATACTGTGGGGGCTTTGGGGAGAGAGAAACAATAGAATCTTCAGAAGATGTGAGAGCTCGAATATCCATGTTTGGTCCCTGGTTGGATTCTCTATTTCTCTTTGGACCTTTGTTTCTTGACTCTTCGGTAACTATTTGTTGAGCCTTATTTCTCTTGCTCTTGACTGAACCGTCGTATGCTTTTCTTTTTTGTATGTTCGTGTATTCTTCAATTTTTTTCTCAATGAAAACCAAGTTCTTTTACCAAAAGAAAAAAAAAACTTAAATTGGAGGCTTACTGATTCTATCAACAACCAATTGAATATTTATTTAAGAAAAAGATCATTGAGACTTGATTTTTTCTTTCTATACTTCTATTTATATATAATGTTGCACAATGGATTACATTTTTATGACTTTGATCGATGTGTATAGATACTTTTTTCTTTTTGTTTTTGTTTTTTGTGAAGTTTACATCTCATTATCTCAAAATTTTCCTCTTCTTTTTTTTAATGCTCAAGGCCACCGTTATCTTTTAATATATTGAGTAGACTGCTGCTTTGAGTTCAACAACAAGAACTATTCCCATTCAATGATCGTTCATGATGCAGAGAACCCTAATGTTGTTGGCAAAGATTTGGAAGCAGCGTCCGATTGGCAAAAGTCCCCTTGTGCTGAGAAGATCTTGTCTGCTAATGATGATGTTAAGCCTGCAACTCTTGTAAGTCTTATCTTTGTCAAAACAAGTATTTGCACTGAATTTGGAGATATGAAGTTTACAGGGCTCTCTTAAGAAAGTTGTAAGCTTATGTTTTGATCTAATTAGGACCGTATAGGTGGATTCACTTCGTTACTGGTGCCACAGCATGTATAAATTTTTTTGCTATGGGACACCTAGATGCTATCTCGTCATTTGCATGTTGAAATTCCGTCGCTAGCCTGTTTTTGTTTTTTTTTCACCAAAGTGATATACTTCAAAAGATGGAAAATAAGGTTATGATTGAACATGTTACTCTATCAAAAAAAAATGATTGGATTTTTTATTTATTATGAACTCATTTCATTGGAAGTACAAAATTACACACACATATACATTAACTTATATGTTTTTAGGAATTAGCGATGAAATAAGGGAGTTACTGGATCAAATTATTTGAAGTATATTTTCTTTTGAGGTTAATCATATTAAGAAATTCTCTTTTTTGAAATAAGTATCAGTCTTCATTTTACTTTAGTCCCGAATTATTTAGAAATGACATAAACTTTCTTTCTCACACAGCTATATAACATCAATTTTAAAGAGACTTCTATCATTCTTTATATTCGATCATAAATGTTGACACTGGTTGAGGCGGCCTTCTGTGTTATGTTTGTTAATTGATTTTTGTAATTGTACACAGGTTAGCCATTCTGGCGTTCCATTGAGAACCAATCTTTTGGCCGACTCCGAGGAAGTTATTTCTTCTTCTCATAAGAAACCAGATAATGATAATAAAGAGTTGGACATTTCTGAGCATGTTTGTACTGATAGCCATGTACTAAAAAATGAACGAGATGTGGTTTCTGATGTTCAGCTTGAAAGTAGTTCTTCATCGGAAGAGCTGAAGCATGAAGACCCAAATTGTAAGGAGCAACAAGTTCATAGTTCTCCTGAAATAGACAGGTTTGCGATACCCTTTAGCTGCACAAGTAAAAAGAGAAATCTTTATATTTTGATGATTCATATTTTGTTTTGAATATAATTACTTAATTATTGTTGCATTAAGTTACAAATTTTTGTATTTTATATGCTCGATTCACCGTCAAGTTTCCGATAATTAGAATAATAATTAATACTTGTATCTAAGAATCATGAGCATGGACCGGAGAACTATTTCTAAAAAAAGGTACTGTTGTTCGTATTAGATGGGTACTCCTCAAACACCTTTTCCTTTTGGACTCCTCAATATGTGCCAATCATGTTGCTGATCTTTTTCACCTTGGGGTTCTTCACATGCCCATTTCCATGTTTTACTTCAAAGTTTTCATGGCTGCTTATTATGAAATAACTGAGATGTTCCTTCCTGCAATTCTTCTATTTTCCAGGGAGAACATTGACAATAGGACAATGGATTTGGTTCAGCCTTCAACAAGTGATTCAAAACCCTGGGGAGGACGCATTAAGTCAATTGTAGATGGTATAATCAACATATGGAGGAAACTTTAAATCCTTCGAGAAGTGTTAATCAGAGATGGTAAATATGTCGTCTTCACACCGGTTAGGAACAAAGTCTCTGTTTCATGTATTACATCTAGCCCTTTTTAATTGGCTGTTTATTCCCTTAGAGTAACCTTTTGTTAATTTCTATATTTTTACCTTATGATTATTTCGGAGTTCGAAACAGAATTTCTGGAGACTTTCTTAGTTGAAATTTGCATAGCTCGAGTAACACAAC

mRNA sequence

CAAAAAAAAGTTCAAAAGCGGAAGAGTACCCTAAAACCCTGAGGAGGGCCTTCTTCCCTGCTCCACTCCTCTCTGCTTCTTCTTCCTATTCCGATGGACTGAGGAACCACAATCTATGGTGAAAATGAGGATTAAGCTTCTTGCTGGAAGAGGACTCCACTCCAACTGTTCTTTCGAGCACTCTATTTCCGGCTTAAAATCGGCGTTCACTCGGAAAGACGTCGACAATTTTGTACCTACCCCAAATGCATGGTGGCGTGGAAGATCATATGCTGCCTCTGTTGCTTCAGATGTACCCCGTCCCGAGAAGGATCGTAAAAAAGTCTCTAGAGAAGATCGGCGAGCAATGGTCGAATCTTTTGTAGACAAGTACAAGGCATCAAATACTGGAAAATTCCCTTCGATAACAGACACTATGAAACAAGTAGGTGGCTCATTTTATACTATTAGGAAAATCCTTCAGGAGCTTCAAAATGAATCTACAATGTCGTCCTTAACGAGTAAAAGTAAAAAGTCGTTTCGAGAAACAGAAATCAAAGAGAACCCTAATGTTGTTGGCAAAGATTTGGAAGCAGCGTCCGATTGGCAAAAGTCCCCTTGTGCTGAGAAGATCTTGTCTGCTAATGATGATGTTAAGCCTGCAACTCTTGTTAGCCATTCTGGCGTTCCATTGAGAACCAATCTTTTGGCCGACTCCGAGGAAGTTATTTCTTCTTCTCATAAGAAACCAGATAATGATAATAAAGAGTTGGACATTTCTGAGCATGTTTGTACTGATAGCCATGTACTAAAAAATGAACGAGATGTGGTTTCTGATGTTCAGCTTGAAAGTAGTTCTTCATCGGAAGAGCTGAAGCATGAAGACCCAAATTGTAAGGAGCAACAAGTTCATAGTTCTCCTGAAATAGACAGGGAGAACATTGACAATAGGACAATGGATTTGGTTCAGCCTTCAACAAGTGATTCAAAACCCTGGGGAGGACGCATTAAGTCAATTGTAGATGGTATAATCAACATATGGAGGAAACTTTAAATCCTTCGAGAAGTGTTAATCAGAGATGGTAAATATGTCGTCTTCACACCGGTTAGGAACAAAGTCTCTGTTTCATGTATTACATCTAGCCCTTTTTAATTGGCTGTTTATTCCCTTAGAGTAACCTTTTGTTAATTTCTATATTTTTACCTTATGATTATTTCGGAGTTCGAAACAGAATTTCTGGAGACTTTCTTAGTTGAAATTTGCATAGCTCGAGTAACACAAC

Coding sequence (CDS)

ATGGTGAAAATGAGGATTAAGCTTCTTGCTGGAAGAGGACTCCACTCCAACTGTTCTTTCGAGCACTCTATTTCCGGCTTAAAATCGGCGTTCACTCGGAAAGACGTCGACAATTTTGTACCTACCCCAAATGCATGGTGGCGTGGAAGATCATATGCTGCCTCTGTTGCTTCAGATGTACCCCGTCCCGAGAAGGATCGTAAAAAAGTCTCTAGAGAAGATCGGCGAGCAATGGTCGAATCTTTTGTAGACAAGTACAAGGCATCAAATACTGGAAAATTCCCTTCGATAACAGACACTATGAAACAAGTAGGTGGCTCATTTTATACTATTAGGAAAATCCTTCAGGAGCTTCAAAATGAATCTACAATGTCGTCCTTAACGAGTAAAAGTAAAAAGTCGTTTCGAGAAACAGAAATCAAAGAGAACCCTAATGTTGTTGGCAAAGATTTGGAAGCAGCGTCCGATTGGCAAAAGTCCCCTTGTGCTGAGAAGATCTTGTCTGCTAATGATGATGTTAAGCCTGCAACTCTTGTTAGCCATTCTGGCGTTCCATTGAGAACCAATCTTTTGGCCGACTCCGAGGAAGTTATTTCTTCTTCTCATAAGAAACCAGATAATGATAATAAAGAGTTGGACATTTCTGAGCATGTTTGTACTGATAGCCATGTACTAAAAAATGAACGAGATGTGGTTTCTGATGTTCAGCTTGAAAGTAGTTCTTCATCGGAAGAGCTGAAGCATGAAGACCCAAATTGTAAGGAGCAACAAGTTCATAGTTCTCCTGAAATAGACAGGGAGAACATTGACAATAGGACAATGGATTTGGTTCAGCCTTCAACAAGTGATTCAAAACCCTGGGGAGGACGCATTAAGTCAATTGTAGATGGTATAATCAACATATGGAGGAAACTTTAA

Protein sequence

MVKMRIKLLAGRGLHSNCSFEHSISGLKSAFTRKDVDNFVPTPNAWWRGRSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFYTIRKILQELQNESTMSSLTSKSKKSFRETEIKENPNVVGKDLEAASDWQKSPCAEKILSANDDVKPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDNKELDISEHVCTDSHVLKNERDVVSDVQLESSSSSEELKHEDPNCKEQQVHSSPEIDRENIDNRTMDLVQPSTSDSKPWGGRIKSIVDGIINIWRKL
BLAST of CmaCh13G001390 vs. TrEMBL
Match: A0A0A0M0E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G502350 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 7.7e-101
Identity = 206/312 (66.03%), Postives = 246/312 (78.85%), Query Frame = 1

Query: 1   MVKMRIKLLAGRGLHSNCSFEHSISGLKSAFTRKDVDNFVPTPNAWWRGRSYAASVASDV 60
           MVKMRIKLL  R LHS  S +H  SGLKS+F+RK++DNFVP  N WWRGRSY  SVASD+
Sbjct: 1   MVKMRIKLLPTRRLHSYSSADHLNSGLKSSFSRKELDNFVPYSNTWWRGRSYVPSVASDI 60

Query: 61  PRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFYTIRKILQELQN 120
           P PEKDRK+VS+E+RRAMVESFV KYKASNTGKFPS  +T K+VGGS+Y +RKILQELQ+
Sbjct: 61  PGPEKDRKRVSKEERRAMVESFVHKYKASNTGKFPSAANTCKEVGGSYYVVRKILQELQS 120

Query: 121 ESTMSSLTSKSKKSFRETEIKEN-------PNVVGKDLEAASDWQKSPCAEKILSANDDV 180
           ES+MSSL  +SK SF+ETEIK N       PN     LEAAS+ QKS  AEKILSA+DDV
Sbjct: 121 ESSMSSLKGRSKNSFQETEIKSNGSLTEERPNAGRIHLEAASELQKSSRAEKILSADDDV 180

Query: 181 KPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDNKELDISEHVCTDSHVLKNERDVVS 240
                 SHS +P+R+NLL DSE+VISS HKKP +D+K+ D+SEH  T+SH LKNERD VS
Sbjct: 181 ------SHSVLPVRSNLLEDSEDVISS-HKKPCDDDKKFDVSEHFSTESHALKNERDAVS 240

Query: 241 DVQLESSSSSEELKHEDPNC-KEQQVHSSPEIDRENIDNRTMDLVQPSTSDSKPWGGRIK 300
           DV LES SSSEELKHE+ +  KEQQV SSP++ REN++NRT+D  Q + ++SKPWG RIK
Sbjct: 241 DVHLESRSSSEELKHEEGSYGKEQQVQSSPKLHRENVENRTVDEAQHTATESKPWGERIK 300

Query: 301 SIVDGIINIWRK 305
           SIVDGI+N+W K
Sbjct: 301 SIVDGIVNMWWK 305

BLAST of CmaCh13G001390 vs. TrEMBL
Match: U5FL36_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s14880g PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 98/283 (34.63%), Postives = 146/283 (51.59%), Query Frame = 1

Query: 35  DVDNFVPTPNAWWRGRSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKF 94
           +V N +   N  WR RSYAASV S +P+  K +K+VS++DRRAMVES+V+KY+ ++ GKF
Sbjct: 21  EVANAIHGANMQWRARSYAASVPSHMPQSHKAQKRVSKDDRRAMVESYVNKYRETHAGKF 80

Query: 95  PSITDTMKQVGGSFYTIRKILQELQNESTMSSLTSKSKKSFRETEIKENPNVVGKDLE-- 154
           PSI+D  KQVGG++Y IRKI+QEL+ +S +SS  S +KK  +E  I   P V  K++   
Sbjct: 81  PSISDARKQVGGNYYFIRKIVQELEYKSKISSSNSGNKK--KELPIVSEPLVKVKNMSTG 140

Query: 155 -AASDWQKSPCAEKILSAND--DVKPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDN 214
            A SD  ++ C  + +  ND  D     L    G       L   E+V+S     P +  
Sbjct: 141 GAMSD-MRTQCDPRAVPLNDVGDTSYRYLEVEGG-------LQTCEKVVSQEFGNPIS-- 200

Query: 215 KELDISEHVCTD---SHVLKNERDVVSDVQLESSSSSEE----LKHEDPNCKEQQVHSSP 274
             L+ S+ V T    SH+ K+E   VS   L  + + +E     K        +    SP
Sbjct: 201 --LEHSDTVGTQAAASHIRKHETKNVSHPGLVEAENDQEKLSAFKRVMDADHSKHNEGSP 260

Query: 275 EIDRENIDNRTMDLVQPSTSDSKPWGGRIKSIVDGIINIWRKL 306
            + +   D  +               G +KS  DG++++WRK+
Sbjct: 261 YLYKHEKDISSTHTDGAELPKKSTVWGSLKSFADGLVSMWRKM 289

BLAST of CmaCh13G001390 vs. TrEMBL
Match: A0A059A4D7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02337 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-21
Identity = 83/267 (31.09%), Postives = 132/267 (49.44%), Query Frame = 1

Query: 47  WRGRSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGG 106
           W   S AASV+S+ P   K RK++ +++R+AMVE +V++Y+++N GKFP+ +D M  VGG
Sbjct: 39  WCAISNAASVSSESPNSCKSRKRIPKDERQAMVERYVNEYRSNNAGKFPTASDAMNHVGG 98

Query: 107 SFYTIRKILQELQNESTMSSLTSKSKKSFRETEIKENP--NVVGKDLEAASDWQKSPCAE 166
           S+Y IRKI+QEL+++S +   TS        TEI   P  N V K +     + +     
Sbjct: 99  SYYVIRKIIQELEHKSKLPQSTS-------GTEISSGPKLNPVKKSMTKVDTYSRKVSVN 158

Query: 167 KILSANDDVKPATLVSHSGVPLRTNLLADSEEVISSSH----KKPDNDNKEL--DISEHV 226
            +    DD   + +  + G           EE+   SH    K  D + KE+  D S+ V
Sbjct: 159 AVTEVEDDRLMSVVAENQG---------PREEITGVSHLSRDKLQDINRKEIQDDDSDSV 218

Query: 227 CTDSHVLKNERDVVSDVQLESSSSSEELKHEDPNCKEQQVHSSPEIDRENIDNRTMDLVQ 286
              + V    R+V  DV  +  ++    +    +    ++   P  D E + N  +D   
Sbjct: 219 AEKNSVKMEVRNVSLDVHPQEDNARHSPRENLTDSGALELQKEPSHDVETVKNDDVD--- 278

Query: 287 PSTSDSKPWGGRIKSIVDGIINIWRKL 306
             +  S  W G +KS  DGI++IW+KL
Sbjct: 279 -ESRKSSLW-GNLKSFADGIVSIWKKL 284

BLAST of CmaCh13G001390 vs. TrEMBL
Match: A0A059A5P5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02337 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.9e-20
Identity = 84/267 (31.46%), Postives = 132/267 (49.44%), Query Frame = 1

Query: 47  WRGRSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGG 106
           W   S AASV+S+ P   K RK++ +++R+AMVE +V++Y+++N GKFP+ +D M  VGG
Sbjct: 39  WCAISNAASVSSESPNSCKSRKRIPKDERQAMVERYVNEYRSNNAGKFPTASDAMNHVGG 98

Query: 107 SFYTIRKILQELQNESTMSSLTSKSKKSFRETEIKENP--NVVGKDLEAASDWQKSPCAE 166
           S+Y IRKI+QEL+++S +   TS        TEI   P  N V K +     + +     
Sbjct: 99  SYYVIRKIIQELEHKSKLPQSTS-------GTEISSGPKLNPVKKSMTKVDTYSRKVSVN 158

Query: 167 KILSANDDVKPATLVSHSGVPLRTNLLADSEEVISSSH----KKPDNDNKEL--DISEHV 226
            +    DD   + +  + G           EE+   SH    K  D + KE+  D S+ V
Sbjct: 159 AVTEVEDDRLMSVVAENQG---------PREEITGVSHLSRDKLQDINRKEIQDDDSDSV 218

Query: 227 CTDSHVLKNERDVVSDVQLESSSSSEELKHEDPNCKEQQVHSSPEIDRENIDNRTMDLVQ 286
              + V    R+V  DV  +  ++    +    +    ++   P  D E +  +  D V 
Sbjct: 219 AEKNSVKMEVRNVSLDVHPQEDNARHSPRENLTDSGALELQKEPSHDVETV--KRNDDVD 278

Query: 287 PSTSDSKPWGGRIKSIVDGIINIWRKL 306
            S   S  W G +KS  DGI++IW+KL
Sbjct: 279 ESRKSSL-W-GNLKSFADGIVSIWKKL 285

BLAST of CmaCh13G001390 vs. TrEMBL
Match: I3SHT9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-17
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 1

Query: 35  DVDNFVPTPNAWWRGRSYAA--SVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTG 94
           +V + V   N  WRG SYAA  S  S+ P  +K RK+VS++ RRA+VESFV+K+++ N G
Sbjct: 28  EVCDSVGPSNVKWRGLSYAAASSAPSEPPESQKGRKRVSKQQRRAIVESFVNKHRSENAG 87

Query: 95  KFPSITDTMKQVGGSFYTIRKILQELQNESTMSS-----------LTSKSKKSFRETEIK 147
           KFP+ITD  KQVGG FY+IR+I++EL+ +S M S           L  KSK+   E+ I 
Sbjct: 88  KFPTITDIQKQVGGGFYSIREIIKELEYKSKMKSSNNKDEILLEKLIDKSKRETTESVIV 147

BLAST of CmaCh13G001390 vs. TAIR10
Match: AT5G58210.3 (AT5G58210.3 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-12
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 1

Query: 50  RSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFY 109
           R Y +    +     K  K++S++DRRA+VESFV++Y+A+N G+FPS+  T KQVGGS+Y
Sbjct: 29  RFYGSPAVCESLTTSKIPKRLSKDDRRALVESFVNEYRATNAGRFPSLDATHKQVGGSYY 88

Query: 110 TIRKILQELQNESTMSSLTSKSKKSFRETEIKENPNVVGKDLEAASDWQKSPCAE-KILS 169
            +R I QEL+       L  K+        + E  + V  D  + S     P  E K LS
Sbjct: 89  IVRDIFQELK-------LKPKAHMPIVAKALSEVSSSVPGDASSHSSPAPVPTVEAKALS 148

Query: 170 ANDDVKPATLVSH---SGVPL----RTNLLADSEEVISSSHKKP 206
                 PA   SH   S VP+      + ++ S    +SSH  P
Sbjct: 149 EVSPSVPADASSHLSPSPVPIVEAKALSEVSPSVPADTSSHFSP 185

BLAST of CmaCh13G001390 vs. TAIR10
Match: AT3G52170.1 (AT3G52170.1 DNA binding)

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-10
Identity = 27/59 (45.76%), Postives = 46/59 (77.97%), Query Frame = 1

Query: 64  EKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFYTIRKILQELQNES 123
           ++ R ++ +E+R+ +VESF+ K++  N G FPS++ T K+VGGSFYTIR+I++E+  E+
Sbjct: 24  KRTRNRIPKEERKTLVESFIKKHQKLNNGSFPSLSLTHKEVGGSFYTIREIVREIIQEN 82

BLAST of CmaCh13G001390 vs. NCBI nr
Match: gi|449470405|ref|XP_004152907.1| (PREDICTED: uncharacterized protein LOC101209410 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 1.1e-100
Identity = 206/312 (66.03%), Postives = 246/312 (78.85%), Query Frame = 1

Query: 1   MVKMRIKLLAGRGLHSNCSFEHSISGLKSAFTRKDVDNFVPTPNAWWRGRSYAASVASDV 60
           MVKMRIKLL  R LHS  S +H  SGLKS+F+RK++DNFVP  N WWRGRSY  SVASD+
Sbjct: 1   MVKMRIKLLPTRRLHSYSSADHLNSGLKSSFSRKELDNFVPYSNTWWRGRSYVPSVASDI 60

Query: 61  PRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFYTIRKILQELQN 120
           P PEKDRK+VS+E+RRAMVESFV KYKASNTGKFPS  +T K+VGGS+Y +RKILQELQ+
Sbjct: 61  PGPEKDRKRVSKEERRAMVESFVHKYKASNTGKFPSAANTCKEVGGSYYVVRKILQELQS 120

Query: 121 ESTMSSLTSKSKKSFRETEIKEN-------PNVVGKDLEAASDWQKSPCAEKILSANDDV 180
           ES+MSSL  +SK SF+ETEIK N       PN     LEAAS+ QKS  AEKILSA+DDV
Sbjct: 121 ESSMSSLKGRSKNSFQETEIKSNGSLTEERPNAGRIHLEAASELQKSSRAEKILSADDDV 180

Query: 181 KPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDNKELDISEHVCTDSHVLKNERDVVS 240
                 SHS +P+R+NLL DSE+VISS HKKP +D+K+ D+SEH  T+SH LKNERD VS
Sbjct: 181 ------SHSVLPVRSNLLEDSEDVISS-HKKPCDDDKKFDVSEHFSTESHALKNERDAVS 240

Query: 241 DVQLESSSSSEELKHEDPNC-KEQQVHSSPEIDRENIDNRTMDLVQPSTSDSKPWGGRIK 300
           DV LES SSSEELKHE+ +  KEQQV SSP++ REN++NRT+D  Q + ++SKPWG RIK
Sbjct: 241 DVHLESRSSSEELKHEEGSYGKEQQVQSSPKLHRENVENRTVDEAQHTATESKPWGERIK 300

Query: 301 SIVDGIINIWRK 305
           SIVDGI+N+W K
Sbjct: 301 SIVDGIVNMWWK 305

BLAST of CmaCh13G001390 vs. NCBI nr
Match: gi|659115338|ref|XP_008457506.1| (PREDICTED: uncharacterized protein LOC103497179 isoform X2 [Cucumis melo])

HSP 1 Score: 360.9 bits (925), Expect = 2.2e-96
Identity = 202/312 (64.74%), Postives = 236/312 (75.64%), Query Frame = 1

Query: 1   MVKMRIKLLAGRGLHSNCSFEHSISGLKSAFTRKDVDNFVPTPNAWWRGRSYAASVASDV 60
           MVKMRIKLL  R +HS  S +H  SGLKSAF  K++DNFVP  N WWRGRSY  SVASD+
Sbjct: 1   MVKMRIKLLPTRRIHSYSSIDHLTSGLKSAFRWKELDNFVPNSNRWWRGRSYVPSVASDI 60

Query: 61  PRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFYTIRKILQELQN 120
           P P KDRK+V  E RRAM+ESFV KYKASNTGKFPS+  T K+VGGS+Y +RKI+QELQN
Sbjct: 61  PGPVKDRKRVPIEKRRAMIESFVHKYKASNTGKFPSLATTFKEVGGSYYVVRKIIQELQN 120

Query: 121 ESTMSSLTSKSKKSFRETEIKENP-------NVVGKDLEAASDWQKSPCAEKILSANDDV 180
           ES++S L  +SKKSF+ETEIK N        NV GK LEAAS+ QKS CAE  LSA DD 
Sbjct: 121 ESSLSYLKGRSKKSFQETEIKSNGSLTEESLNVSGKHLEAASELQKSSCAENTLSAADD- 180

Query: 181 KPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDNKELDISEHVCTDSHVLKNERDVVS 240
                VSHS +P+R+NLL DSE++I SSHKKP +D+K+ DIS+ V T+SH LKNERDVVS
Sbjct: 181 -----VSHSVLPMRSNLLEDSEDII-SSHKKPYDDDKKFDISQQVSTESHALKNERDVVS 240

Query: 241 DVQLESSSSSEELKHED-PNCKEQQVHSSPEIDRENIDNRTMDLVQPSTSDSKPWGGRIK 300
           DV LE S +SEELKHE+ P  KEQQV SSPE+ R NI  RT+D  Q +  +SKPWG RIK
Sbjct: 241 DVHLE-SRTSEELKHEEGPYGKEQQVQSSPELHRVNIKTRTVDEAQHTAIESKPWGERIK 300

Query: 301 SIVDGIINIWRK 305
           SIVDGI N+WRK
Sbjct: 301 SIVDGIFNMWRK 304

BLAST of CmaCh13G001390 vs. NCBI nr
Match: gi|659115334|ref|XP_008457504.1| (PREDICTED: uncharacterized protein LOC103497179 isoform X1 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 2.6e-94
Identity = 202/319 (63.32%), Postives = 236/319 (73.98%), Query Frame = 1

Query: 1   MVKMRIKLLAGRGLHSNCSFEHSISGLKS-------AFTRKDVDNFVPTPNAWWRGRSYA 60
           MVKMRIKLL  R +HS  S +H  SGLKS       AF  K++DNFVP  N WWRGRSY 
Sbjct: 1   MVKMRIKLLPTRRIHSYSSIDHLTSGLKSVNLHHFAAFRWKELDNFVPNSNRWWRGRSYV 60

Query: 61  ASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKFPSITDTMKQVGGSFYTIRK 120
            SVASD+P P KDRK+V  E RRAM+ESFV KYKASNTGKFPS+  T K+VGGS+Y +RK
Sbjct: 61  PSVASDIPGPVKDRKRVPIEKRRAMIESFVHKYKASNTGKFPSLATTFKEVGGSYYVVRK 120

Query: 121 ILQELQNESTMSSLTSKSKKSFRETEIKENP-------NVVGKDLEAASDWQKSPCAEKI 180
           I+QELQNES++S L  +SKKSF+ETEIK N        NV GK LEAAS+ QKS CAE  
Sbjct: 121 IIQELQNESSLSYLKGRSKKSFQETEIKSNGSLTEESLNVSGKHLEAASELQKSSCAENT 180

Query: 181 LSANDDVKPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDNKELDISEHVCTDSHVLK 240
           LSA DDV      SHS +P+R+NLL DSE++ISS HKKP +D+K+ DIS+ V T+SH LK
Sbjct: 181 LSAADDV------SHSVLPMRSNLLEDSEDIISS-HKKPYDDDKKFDISQQVSTESHALK 240

Query: 241 NERDVVSDVQLESSSSSEELKHED-PNCKEQQVHSSPEIDRENIDNRTMDLVQPSTSDSK 300
           NERDVVSDV LE S +SEELKHE+ P  KEQQV SSPE+ R NI  RT+D  Q +  +SK
Sbjct: 241 NERDVVSDVHLE-SRTSEELKHEEGPYGKEQQVQSSPELHRVNIKTRTVDEAQHTAIESK 300

Query: 301 PWGGRIKSIVDGIINIWRK 305
           PWG RIKSIVDGI N+WRK
Sbjct: 301 PWGERIKSIVDGIFNMWRK 311

BLAST of CmaCh13G001390 vs. NCBI nr
Match: gi|566215961|ref|XP_006372275.1| (hypothetical protein POPTR_0018s14880g [Populus trichocarpa])

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 98/283 (34.63%), Postives = 146/283 (51.59%), Query Frame = 1

Query: 35  DVDNFVPTPNAWWRGRSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKF 94
           +V N +   N  WR RSYAASV S +P+  K +K+VS++DRRAMVES+V+KY+ ++ GKF
Sbjct: 21  EVANAIHGANMQWRARSYAASVPSHMPQSHKAQKRVSKDDRRAMVESYVNKYRETHAGKF 80

Query: 95  PSITDTMKQVGGSFYTIRKILQELQNESTMSSLTSKSKKSFRETEIKENPNVVGKDLE-- 154
           PSI+D  KQVGG++Y IRKI+QEL+ +S +SS  S +KK  +E  I   P V  K++   
Sbjct: 81  PSISDARKQVGGNYYFIRKIVQELEYKSKISSSNSGNKK--KELPIVSEPLVKVKNMSTG 140

Query: 155 -AASDWQKSPCAEKILSAND--DVKPATLVSHSGVPLRTNLLADSEEVISSSHKKPDNDN 214
            A SD  ++ C  + +  ND  D     L    G       L   E+V+S     P +  
Sbjct: 141 GAMSD-MRTQCDPRAVPLNDVGDTSYRYLEVEGG-------LQTCEKVVSQEFGNPIS-- 200

Query: 215 KELDISEHVCTD---SHVLKNERDVVSDVQLESSSSSEE----LKHEDPNCKEQQVHSSP 274
             L+ S+ V T    SH+ K+E   VS   L  + + +E     K        +    SP
Sbjct: 201 --LEHSDTVGTQAAASHIRKHETKNVSHPGLVEAENDQEKLSAFKRVMDADHSKHNEGSP 260

Query: 275 EIDRENIDNRTMDLVQPSTSDSKPWGGRIKSIVDGIINIWRKL 306
            + +   D  +               G +KS  DG++++WRK+
Sbjct: 261 YLYKHEKDISSTHTDGAELPKKSTVWGSLKSFADGLVSMWRKM 289

BLAST of CmaCh13G001390 vs. NCBI nr
Match: gi|743805145|ref|XP_011017552.1| (PREDICTED: uncharacterized protein LOC105120868 isoform X2 [Populus euphratica])

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 1

Query: 35  DVDNFVPTPNAWWRGRSYAASVASDVPRPEKDRKKVSREDRRAMVESFVDKYKASNTGKF 94
           +V N +   N  WR RSYAASV S +P+  K +K+VS++DRRAMVES+V+KY+ ++ GKF
Sbjct: 21  EVANAIHGANMQWRARSYAASVPSHMPKSHKAQKRVSKDDRRAMVESYVNKYRETHAGKF 80

Query: 95  PSITDTMKQVGGSFYTIRKILQELQNESTMSSLTSKSKKSFRETEIKENPNVVGKDLE-- 154
           PSI+D  K+ GG++Y IRKI+QEL+ +S +SSL S +KK  +E  I   P V  K++   
Sbjct: 81  PSISDAQKEAGGNYYFIRKIVQELEYKSKLSSLNSGNKK--KELPIMSEPLVKVKNMSTG 140

Query: 155 -AASDWQKSPCAEKILSAND 172
            A SD  ++ C  + +  ND
Sbjct: 141 GAISD-MRNQCDPRAVPLND 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0M0E7_CUCSA7.7e-10166.03Uncharacterized protein OS=Cucumis sativus GN=Csa_1G502350 PE=4 SV=1[more]
U5FL36_POPTR1.3e-2334.63Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s14880g PE=4 SV=1[more]
A0A059A4D7_EUCGR4.6e-2131.09Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02337 PE=4 SV=1[more]
A0A059A5P5_EUCGR3.9e-2031.46Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02337 PE=4 SV=1[more]
I3SHT9_LOTJA2.4e-1745.60Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G58210.33.5e-1234.76 hydroxyproline-rich glycoprotein family protein[more]
AT3G52170.17.3e-1045.76 DNA binding[more]
Match NameE-valueIdentityDescription
gi|449470405|ref|XP_004152907.1|1.1e-10066.03PREDICTED: uncharacterized protein LOC101209410 [Cucumis sativus][more]
gi|659115338|ref|XP_008457506.1|2.2e-9664.74PREDICTED: uncharacterized protein LOC103497179 isoform X2 [Cucumis melo][more]
gi|659115334|ref|XP_008457504.1|2.6e-9463.32PREDICTED: uncharacterized protein LOC103497179 isoform X1 [Cucumis melo][more]
gi|566215961|ref|XP_006372275.1|1.9e-2334.63hypothetical protein POPTR_0018s14880g [Populus trichocarpa][more]
gi|743805145|ref|XP_011017552.1|1.3e-2146.43PREDICTED: uncharacterized protein LOC105120868 isoform X2 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G001390.1CmaCh13G001390.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34568FAMILY NOT NAMEDcoord: 47..305
score: 1.2
NoneNo IPR availablePANTHERPTHR34568:SF1SUBFAMILY NOT NAMEDcoord: 47..305
score: 1.2

The following gene(s) are paralogous to this gene:

None