CmaCh12G008040 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCAAATTATTAACAACAGTCCATTCATGAATGAAATCAGGAAACCAGCCAAACATGCTACGAAACCGTACGAAGATCGTGGGCCGAAATTGATAATCGCGGAGAACAAGCCAGAAGGGCTCATGATTCTGAGCAAAAGATTCAAAACTTGTAAGAAATTGAATGAAAGTCATGAGCTGAAGAACCATCTGGACAATGTTTTCACGTACGCAGCTCAGTACAACAGCCCGCATGAGAAGCCAGTGAGAGTCATATGTGCGGCCATTGATGAAGCGGCAAGGAAAAACAGCGACGTGATTGAGCAAGTGGTTGCGGGGGTCGTTGCTTTGATCGGGGAGAGGGATTGTTACGATGTGTTTGAATTTGGGGATCCCGATGATGCCATTGATCCCTTTACATGGCAGGCATGCTGATTCATTCCCTATTGGTGTTTTTGATGCTTAATTTTTGAAATTATGAATTCAATAGGTAGTTAGAAATAACTGCTCTCCATAATGGAATGATAACCTCTATTTTGATTATAAGTTTTCATGGCTCAATTCGTTCTCCCCTCGAATAAAGTACACTTTGTTCGATACTTGAGTCACTTTGACTACATCTTTGTAGAAACCTTTCCCTATCTGACGTGGAAACCTTTCTCTAGCAGACACGTCTTAAGGGGAAGCACAAAGAGGACAATATCTGCCAGCGGTGGGCTTCGGTCGTTACAAATAGTATTAAAGCCAGGTTACCGGGAGATGTGCGAGTTTAGGGGTGGATTTGGTGGGGATCCCACATTGATTTGAGAAAGAACGAGTGCCAGCGAAGACGCTGGGCTCTGAAGCGGGTGGATTGTGATATCCCACATTAGCTGTAAGGGTGTGGAACCTTACCTTTTCCTAGGAAGTTGAAGAGGAGAATGAAACACCCTTTATAAGGGTGTGGAAACCTTACCTTTCCCTAGTAATTGGAGAGGAGAACAAAACAAGGTGTGAAAGCCTTACCTTTCCCTAGGAGGTTGGAGAGGAGAACGAAACAACCCTTTATAAGGATGTGAAAGCCTTAGCTTTCCCAAGGAGGTTGGAGAGGAGAACGAAACAACCCTTGGGTGTTGAAGCCTTCCCCTAGCAGGGTTTAAAGGGTTTGGAAACCTTCCCCTAGCAGGGTTTAAAGGGTGTTGAAACCTTACCATTCCCTAGGAGGTTGGAGAGGAGAACGAAACAACCCTTATAAAGAGTATGGAAACCTTCCCCTAGCAGGGTTTAAAGGGTGTGGAAACCTTCTCCGAGAAGGATTTTTAAAGCCTTGAAGGGAAGCTCTTTATAAGGGTGTGGAAACCTTCCCCCTTCCTCTAGCTAAAGGATGTGGAAACCTTCCCCCCTTTCCCTAGCAGGTTTGCCTTGAGGGGAAGCCGAGGACCATATTTGCTAGTTGTAGGTTTGGGCCGTTACAACCTTCAAAGCTCACACTTCTTTGTTTGACATGGATAAGTTAAGGGCATGGCTCTGATACCATGTTATGAATCACGAACCTACACAATGGTATGATATTTGCTTTGATACCATGTTATGAATCACAAGCCTACACAAAGGTATGAGGGCCATTACAACCTTCGAAGCTCACACTTCTTTGTTCGACATGGATAAGTTAAGGGCATGACTCTCATACCATGTTATGAATCACGAACCTCCACTATGGTATGATATGAGCTCTCATGGCTTTCTTTTGGGTTTTATAAAAAAGTCTCGTGTAAATATAGATGTATTTCTTATTTATAAATCTATGATCATTCTCTTCAACGCGAGACTCCCTCCCAACCATCCTTAATATAACTTAATTTGTTCCGGTGTACAGCGAGATGGTAATGCCTATTGGGATTAGTGGCAAAGAAGACTCGATGTTCCCAACAGCACCTTTTGATTTCAACGAATTTAAGAAGGATTGCAAGGCTGTGTATGGGGTTTCACCAAATCGTCATTAG ATGCTTCAAATTATTAACAACAGTCCATTCATGAATGAAATCAGGAAACCAGCCAAACATGCTACGAAACCGTACGAAGATCGTGGGCCGAAATTGATAATCGCGGAGAACAAGCCAGAAGGGCTCATGATTCTGAGCAAAAGATTCAAAACTTGTAAGAAATTGAATGAAAGTCATGAGCTGAAGAACCATCTGGACAATGTTTTCACGTACGCAGCTCAGTACAACAGCCCGCATGAGAAGCCAGTGAGAGTCATATGTGCGGCCATTGATGAAGCGGCAAGGAAAAACAGCGACGTGATTGAGCAAGTGGTTGCGGGGGTCGTTGCTTTGATCGGGGAGAGGGATTGTTACGATGATTGCAAGGCTGTGTATGGGGTTTCACCAAATCGTCATTAG ATGCTTCAAATTATTAACAACAGTCCATTCATGAATGAAATCAGGAAACCAGCCAAACATGCTACGAAACCGTACGAAGATCGTGGGCCGAAATTGATAATCGCGGAGAACAAGCCAGAAGGGCTCATGATTCTGAGCAAAAGATTCAAAACTTGTAAGAAATTGAATGAAAGTCATGAGCTGAAGAACCATCTGGACAATGTTTTCACGTACGCAGCTCAGTACAACAGCCCGCATGAGAAGCCAGTGAGAGTCATATGTGCGGCCATTGATGAAGCGGCAAGGAAAAACAGCGACGTGATTGAGCAAGTGGTTGCGGGGGTCGTTGCTTTGATCGGGGAGAGGGATTGTTACGATGATTGCAAGGCTGTGTATGGGGTTTCACCAAATCGTCATTAG MLQIINNSPFMNEIRKPAKHATKPYEDRGPKLIIAENKPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKNSDVIEQVVAGVVALIGERDCYDDCKAVYGVSPNRH
BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A0A0LV80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G143280 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.0e-22 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A0L9UN04_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g173800 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-20 Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A0S3SGN3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G068000 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.3e-20 Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A151SAK8_CAJCA (Lysosomal Pro-X carboxypeptidase OS=Cajanus cajan GN=KK1_026340 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.5e-19 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TrEMBL
Match: V7BVS0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G129100g PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18 Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TAIR10
Match: AT5G22860.1 (AT5G22860.1 Serine carboxypeptidase S28 family protein) HSP 1 Score: 72.8 bits (177), Expect = 1.8e-13 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TAIR10
Match: AT3G28680.1 (AT3G28680.1 Serine carboxypeptidase S28 family protein) HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 1
BLAST of CmaCh12G008040 vs. TAIR10
Match: AT5G65760.1 (AT5G65760.1 Serine carboxypeptidase S28 family protein) HSP 1 Score: 51.6 bits (122), Expect = 4.3e-07 Identity = 30/119 (25.21%), Postives = 57/119 (47.90%), Query Frame = 1
BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|778659305|ref|XP_011654164.1| (PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1
BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|700209778|gb|KGN64874.1| (hypothetical protein Csa_1G143280 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21 Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1
BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|920700908|gb|KOM44133.1| (hypothetical protein LR48_Vigan05g173800 [Vigna angularis]) HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20 Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|1012340604|gb|KYP51818.1| (Lysosomal Pro-X carboxypeptidase [Cajanus cajan]) HSP 1 Score: 102.1 bits (253), Expect = 7.8e-19 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|593699326|ref|XP_007150128.1| (hypothetical protein PHAVU_005G129100g [Phaseolus vulgaris]) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18 Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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