CmaCh12G008040 (gene) Cucurbita maxima (Rimu)

NameCmaCh12G008040
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLysosomal Pro-X carboxypeptidase
LocationCma_Chr12 : 5821530 .. 5823493 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCAAATTATTAACAACAGTCCATTCATGAATGAAATCAGGAAACCAGCCAAACATGCTACGAAACCGTACGAAGATCGTGGGCCGAAATTGATAATCGCGGAGAACAAGCCAGAAGGGCTCATGATTCTGAGCAAAAGATTCAAAACTTGTAAGAAATTGAATGAAAGTCATGAGCTGAAGAACCATCTGGACAATGTTTTCACGTACGCAGCTCAGTACAACAGCCCGCATGAGAAGCCAGTGAGAGTCATATGTGCGGCCATTGATGAAGCGGCAAGGAAAAACAGCGACGTGATTGAGCAAGTGGTTGCGGGGGTCGTTGCTTTGATCGGGGAGAGGGATTGTTACGATGTGTTTGAATTTGGGGATCCCGATGATGCCATTGATCCCTTTACATGGCAGGCATGCTGATTCATTCCCTATTGGTGTTTTTGATGCTTAATTTTTGAAATTATGAATTCAATAGGTAGTTAGAAATAACTGCTCTCCATAATGGAATGATAACCTCTATTTTGATTATAAGTTTTCATGGCTCAATTCGTTCTCCCCTCGAATAAAGTACACTTTGTTCGATACTTGAGTCACTTTGACTACATCTTTGTAGAAACCTTTCCCTATCTGACGTGGAAACCTTTCTCTAGCAGACACGTCTTAAGGGGAAGCACAAAGAGGACAATATCTGCCAGCGGTGGGCTTCGGTCGTTACAAATAGTATTAAAGCCAGGTTACCGGGAGATGTGCGAGTTTAGGGGTGGATTTGGTGGGGATCCCACATTGATTTGAGAAAGAACGAGTGCCAGCGAAGACGCTGGGCTCTGAAGCGGGTGGATTGTGATATCCCACATTAGCTGTAAGGGTGTGGAACCTTACCTTTTCCTAGGAAGTTGAAGAGGAGAATGAAACACCCTTTATAAGGGTGTGGAAACCTTACCTTTCCCTAGTAATTGGAGAGGAGAACAAAACAAGGTGTGAAAGCCTTACCTTTCCCTAGGAGGTTGGAGAGGAGAACGAAACAACCCTTTATAAGGATGTGAAAGCCTTAGCTTTCCCAAGGAGGTTGGAGAGGAGAACGAAACAACCCTTGGGTGTTGAAGCCTTCCCCTAGCAGGGTTTAAAGGGTTTGGAAACCTTCCCCTAGCAGGGTTTAAAGGGTGTTGAAACCTTACCATTCCCTAGGAGGTTGGAGAGGAGAACGAAACAACCCTTATAAAGAGTATGGAAACCTTCCCCTAGCAGGGTTTAAAGGGTGTGGAAACCTTCTCCGAGAAGGATTTTTAAAGCCTTGAAGGGAAGCTCTTTATAAGGGTGTGGAAACCTTCCCCCTTCCTCTAGCTAAAGGATGTGGAAACCTTCCCCCCTTTCCCTAGCAGGTTTGCCTTGAGGGGAAGCCGAGGACCATATTTGCTAGTTGTAGGTTTGGGCCGTTACAACCTTCAAAGCTCACACTTCTTTGTTTGACATGGATAAGTTAAGGGCATGGCTCTGATACCATGTTATGAATCACGAACCTACACAATGGTATGATATTTGCTTTGATACCATGTTATGAATCACAAGCCTACACAAAGGTATGAGGGCCATTACAACCTTCGAAGCTCACACTTCTTTGTTCGACATGGATAAGTTAAGGGCATGACTCTCATACCATGTTATGAATCACGAACCTCCACTATGGTATGATATGAGCTCTCATGGCTTTCTTTTGGGTTTTATAAAAAAGTCTCGTGTAAATATAGATGTATTTCTTATTTATAAATCTATGATCATTCTCTTCAACGCGAGACTCCCTCCCAACCATCCTTAATATAACTTAATTTGTTCCGGTGTACAGCGAGATGGTAATGCCTATTGGGATTAGTGGCAAAGAAGACTCGATGTTCCCAACAGCACCTTTTGATTTCAACGAATTTAAGAAGGATTGCAAGGCTGTGTATGGGGTTTCACCAAATCGTCATTAG

mRNA sequence

ATGCTTCAAATTATTAACAACAGTCCATTCATGAATGAAATCAGGAAACCAGCCAAACATGCTACGAAACCGTACGAAGATCGTGGGCCGAAATTGATAATCGCGGAGAACAAGCCAGAAGGGCTCATGATTCTGAGCAAAAGATTCAAAACTTGTAAGAAATTGAATGAAAGTCATGAGCTGAAGAACCATCTGGACAATGTTTTCACGTACGCAGCTCAGTACAACAGCCCGCATGAGAAGCCAGTGAGAGTCATATGTGCGGCCATTGATGAAGCGGCAAGGAAAAACAGCGACGTGATTGAGCAAGTGGTTGCGGGGGTCGTTGCTTTGATCGGGGAGAGGGATTGTTACGATGATTGCAAGGCTGTGTATGGGGTTTCACCAAATCGTCATTAG

Coding sequence (CDS)

ATGCTTCAAATTATTAACAACAGTCCATTCATGAATGAAATCAGGAAACCAGCCAAACATGCTACGAAACCGTACGAAGATCGTGGGCCGAAATTGATAATCGCGGAGAACAAGCCAGAAGGGCTCATGATTCTGAGCAAAAGATTCAAAACTTGTAAGAAATTGAATGAAAGTCATGAGCTGAAGAACCATCTGGACAATGTTTTCACGTACGCAGCTCAGTACAACAGCCCGCATGAGAAGCCAGTGAGAGTCATATGTGCGGCCATTGATGAAGCGGCAAGGAAAAACAGCGACGTGATTGAGCAAGTGGTTGCGGGGGTCGTTGCTTTGATCGGGGAGAGGGATTGTTACGATGATTGCAAGGCTGTGTATGGGGTTTCACCAAATCGTCATTAG

Protein sequence

MLQIINNSPFMNEIRKPAKHATKPYEDRGPKLIIAENKPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKNSDVIEQVVAGVVALIGERDCYDDCKAVYGVSPNRH
BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A0A0LV80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G143280 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.0e-22
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1

Query: 34  IAENKPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEA 93
           IA     GL ILSK+FKTC KL  S E+KN +D+VFT AAQYN P+E PVR IC AIDE 
Sbjct: 72  IAGKTRGGLSILSKQFKTCGKLKTSSEIKNLMDSVFTMAAQYNDPYENPVRGICVAIDEE 131

Query: 94  ARKNSDVIEQVVAGVVALIGERDCYD 120
           A+K S+VI+QVVAGV+A +GER CYD
Sbjct: 132 AKKKSNVIKQVVAGVIAYLGERPCYD 157

BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A0L9UN04_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g173800 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-20
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTCKKLN+S ELK++LD+++T AAQY+ P E PV+VIC+AID AA+K 
Sbjct: 261 KPNGLSILSKRFKTCKKLNKSFELKDYLDSLYTDAAQYDFPSENPVKVICSAIDAAAKK- 320

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +G R CYD
Sbjct: 321 TDIVGQIFEGVVAFMGHRSCYD 341

BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A0S3SGN3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G068000 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-20
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTCKKLN+S ELK++LD+++T AAQY+ P E PV+VIC+AID AA+K 
Sbjct: 261 KPNGLSILSKRFKTCKKLNKSFELKDYLDSLYTDAAQYDFPSENPVKVICSAIDAAAKK- 320

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +G R CYD
Sbjct: 321 TDIVGQIFEGVVAFMGHRSCYD 341

BLAST of CmaCh12G008040 vs. TrEMBL
Match: A0A151SAK8_CAJCA (Lysosomal Pro-X carboxypeptidase OS=Cajanus cajan GN=KK1_026340 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-19
Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTC KLN+S ELK++LD+++T AAQYN P E PV VICAAID AA+K 
Sbjct: 264 KPNGLSILSKRFKTCDKLNKSFELKDYLDSLYTDAAQYNYPPEYPVTVICAAIDAAAKK- 323

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +  R CYD
Sbjct: 324 TDILGQIFEGVVAYMKHRSCYD 344

BLAST of CmaCh12G008040 vs. TrEMBL
Match: V7BVS0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G129100g PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18
Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTC+KL++S ELK++LD+++T AAQYN P E PV+VIC+AID AA+K 
Sbjct: 264 KPNGLSILSKRFKTCEKLSKSFELKDYLDSLYTDAAQYNFPSENPVKVICSAIDAAAKK- 323

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +    CYD
Sbjct: 324 TDILGQIFEGVVAFMRHHSCYD 344

BLAST of CmaCh12G008040 vs. TAIR10
Match: AT5G22860.1 (AT5G22860.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-13
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAID-EAARK 97
           KP GL ILSK+FKTC  LN S ++K+ LD ++  A QYN      V  +C AI+     +
Sbjct: 261 KPNGLSILSKQFKTCAPLNGSFDIKDFLDTIYAEAVQYNRGPNFWVAKVCNAINANPPNR 320

Query: 98  NSDVIEQVVAGVVALIGERDCYD 120
             ++++++ AGVVAL+G R CYD
Sbjct: 321 RYNLLDRIFAGVVALVGNRTCYD 343

BLAST of CmaCh12G008040 vs. TAIR10
Match: AT3G28680.1 (AT3G28680.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEA-ARK 97
           KP  L ILSK FK C  LN+  ELK+++  ++   AQY S ++  V  +C AI+ +    
Sbjct: 90  KPNSLSILSKNFKLCNPLNDIIELKSYVSYIYARTAQY-SDNQFSVARLCEAINTSPPNT 149

Query: 98  NSDVIEQVVAGVVALIGERDCY 119
            SD+++Q+ AGVVA  G   CY
Sbjct: 150 KSDLLDQIFAGVVASRGNISCY 170

BLAST of CmaCh12G008040 vs. TAIR10
Match: AT5G65760.1 (AT5G65760.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 51.6 bits (122), Expect = 4.3e-07
Identity = 30/119 (25.21%), Postives = 57/119 (47.90%), Query Frame = 1

Query: 12  NEIRKPAKHATKPYEDRGPKLIIAENKPEGLMILSKRFKTCKKLNESHELKNHLDNVFTY 71
           N+ ++ +       +D    +I    K  GL+ L+K F  C+ LN + +L + LD+ ++Y
Sbjct: 237 NDFKRESSSCFNTIKDSWDAIIAEGQKENGLLQLTKTFHFCRVLNSTDDLSDWLDSAYSY 296

Query: 72  AAQYNSPHE---------KPVRVICAAIDEAARKNSDVIEQVVAGVVA---LIGERDCY 119
            A  + P+           P+R +C  ID  A  N+ +++++ AG+       G  DC+
Sbjct: 297 LAMVDYPYPADFMMPLPGHPIREVCRKID-GAGSNASILDRIYAGISVYYNYTGNVDCF 354

BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|778659305|ref|XP_011654164.1| (PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1

Query: 34  IAENKPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEA 93
           IA     GL ILSK+FKTC KL  S E+KN +D+VFT AAQYN P+E PVR IC AIDE 
Sbjct: 72  IAGKTRGGLSILSKQFKTCGKLKTSSEIKNLMDSVFTMAAQYNDPYENPVRGICVAIDEE 131

Query: 94  ARKNSDVIEQVVAGVVALIGERDCYD 120
           A+K S+VI+QVVAGV+A +GER CYD
Sbjct: 132 AKKKSNVIKQVVAGVIAYLGERPCYD 157

BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|700209778|gb|KGN64874.1| (hypothetical protein Csa_1G143280 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1

Query: 34  IAENKPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEA 93
           IA     GL ILSK+FKTC KL  S E+KN +D+VFT AAQYN P+E PVR IC AIDE 
Sbjct: 72  IAGKTRGGLSILSKQFKTCGKLKTSSEIKNLMDSVFTMAAQYNDPYENPVRGICVAIDEE 131

Query: 94  ARKNSDVIEQVVAGVVALIGERDCYD 120
           A+K S+VI+QVVAGV+A +GER CYD
Sbjct: 132 AKKKSNVIKQVVAGVIAYLGERPCYD 157

BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|920700908|gb|KOM44133.1| (hypothetical protein LR48_Vigan05g173800 [Vigna angularis])

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-20
Identity = 52/82 (63.41%), Postives = 67/82 (81.71%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTCKKLN+S ELK++LD+++T AAQY+ P E PV+VIC+AID AA+K 
Sbjct: 261 KPNGLSILSKRFKTCKKLNKSFELKDYLDSLYTDAAQYDFPSENPVKVICSAIDAAAKK- 320

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +G R CYD
Sbjct: 321 TDIVGQIFEGVVAFMGHRSCYD 341

BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|1012340604|gb|KYP51818.1| (Lysosomal Pro-X carboxypeptidase [Cajanus cajan])

HSP 1 Score: 102.1 bits (253), Expect = 7.8e-19
Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTC KLN+S ELK++LD+++T AAQYN P E PV VICAAID AA+K 
Sbjct: 264 KPNGLSILSKRFKTCDKLNKSFELKDYLDSLYTDAAQYNYPPEYPVTVICAAIDAAAKK- 323

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +  R CYD
Sbjct: 324 TDILGQIFEGVVAYMKHRSCYD 344

BLAST of CmaCh12G008040 vs. NCBI nr
Match: gi|593699326|ref|XP_007150128.1| (hypothetical protein PHAVU_005G129100g [Phaseolus vulgaris])

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-18
Identity = 49/82 (59.76%), Postives = 65/82 (79.27%), Query Frame = 1

Query: 38  KPEGLMILSKRFKTCKKLNESHELKNHLDNVFTYAAQYNSPHEKPVRVICAAIDEAARKN 97
           KP GL ILSKRFKTC+KL++S ELK++LD+++T AAQYN P E PV+VIC+AID AA+K 
Sbjct: 264 KPNGLSILSKRFKTCEKLSKSFELKDYLDSLYTDAAQYNFPSENPVKVICSAIDAAAKK- 323

Query: 98  SDVIEQVVAGVVALIGERDCYD 120
           +D++ Q+  GVVA +    CYD
Sbjct: 324 TDILGQIFEGVVAFMRHHSCYD 344

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LV80_CUCSA9.0e-2265.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G143280 PE=4 SV=1[more]
A0A0L9UN04_PHAAN1.3e-2063.41Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan05g173800 PE=4 SV=1[more]
A0A0S3SGN3_PHAAN1.3e-2063.41Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G068000 PE=... [more]
A0A151SAK8_CAJCA5.5e-1963.41Lysosomal Pro-X carboxypeptidase OS=Cajanus cajan GN=KK1_026340 PE=4 SV=1[more]
V7BVS0_PHAVU1.6e-1859.76Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G129100g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G22860.11.8e-1344.58 Serine carboxypeptidase S28 family protein[more]
AT3G28680.12.7e-0941.46 Serine carboxypeptidase S28 family protein[more]
AT5G65760.14.3e-0725.21 Serine carboxypeptidase S28 family protein[more]
Match NameE-valueIdentityDescription
gi|778659305|ref|XP_011654164.1|1.3e-2165.12PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus][more]
gi|700209778|gb|KGN64874.1|1.3e-2165.12hypothetical protein Csa_1G143280 [Cucumis sativus][more]
gi|920700908|gb|KOM44133.1|1.9e-2063.41hypothetical protein LR48_Vigan05g173800 [Vigna angularis][more]
gi|1012340604|gb|KYP51818.1|7.8e-1963.41Lysosomal Pro-X carboxypeptidase [Cajanus cajan][more]
gi|593699326|ref|XP_007150128.1|2.3e-1859.76hypothetical protein PHAVU_005G129100g [Phaseolus vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008236 serine-type peptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G008040.1CmaCh12G008040.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11010PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATEDcoord: 38..119
score: 9.5
NoneNo IPR availablePANTHERPTHR11010:SF47PROLYLCARBOXYPEPTIDASE-LIKE PROTEIN-RELATEDcoord: 38..119
score: 9.5

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G008040Csa1G143280Cucumber (Chinese Long) v2cmacuB163
CmaCh12G008040CSPI01G14130Wild cucumber (PI 183967)cmacpiB163
The following gene(s) are paralogous to this gene:

None