CmaCh12G007560 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCCGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGCCCCTGTTTTTTCAGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAGGGCGAAGAAGGCCCCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGNNNNNNNNNNAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA ATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCCGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGNNNNNNNNNNAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA ATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCCGCGCGAGCAGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGGTAAGAAGGGGTAGAGAAAATACCTCGAGCCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCAGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGNNNNNNNNNNAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA MNGAKRSAEAVGCKNASVGERSALEGSTRASSGGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGGVRRGRENTSSQCSSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTGVPPHKGGRSDQARATVYQKHRSPQSREPATEAPVNGGRNYNGPKASQKVTEACKGFLGPDGDWPSSAKAEGSLTARPTRRAGTKVGXXXKYSWVTDSEVVP
BLAST of CmaCh12G007560 vs. TrEMBL
Match: A0A078C9H5_BRANA (BnaC09g26890D protein OS=Brassica napus GN=BnaC09g26890D PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.8e-65 Identity = 151/230 (65.65%), Postives = 156/230 (67.83%), Query Frame = 1
BLAST of CmaCh12G007560 vs. TrEMBL
Match: A0A078G2W9_BRANA (BnaC09g29220D protein OS=Brassica napus GN=BnaC09g29220D PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.0e-52 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. TrEMBL
Match: A0A078J910_BRANA (BnaUnng00830D protein OS=Brassica napus GN=BnaUnng00830D PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.0e-52 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. TrEMBL
Match: A0A078E1F1_BRANA (BnaC09g16490D protein OS=Brassica napus GN=BnaC09g16490D PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.0e-52 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. TrEMBL
Match: A0A0D2ZTA2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.0e-52 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. NCBI nr
Match: gi|674961880|emb|CDX71648.1| (BnaC09g26890D [Brassica napus]) HSP 1 Score: 256.5 bits (654), Expect = 4.1e-65 Identity = 151/230 (65.65%), Postives = 156/230 (67.83%), Query Frame = 1
BLAST of CmaCh12G007560 vs. NCBI nr
Match: gi|674913481|emb|CDY19666.1| (BnaC09g29220D [Brassica napus]) HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. NCBI nr
Match: gi|674871093|emb|CDY63595.1| (BnaUnng00830D [Brassica napus]) HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. NCBI nr
Match: gi|674913470|emb|CDY19655.1| (BnaC09g29110D [Brassica napus]) HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51 Identity = 121/166 (72.89%), Postives = 125/166 (75.30%), Query Frame = 1
BLAST of CmaCh12G007560 vs. NCBI nr
Match: gi|643736466|gb|KDP42772.1| (hypothetical protein JCGZ_00471 [Jatropha curcas]) HSP 1 Score: 207.2 bits (526), Expect = 2.8e-50 Identity = 109/115 (94.78%), Postives = 109/115 (94.78%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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