CmaCh12G007250 (gene) Cucurbita maxima (Rimu)

NameCmaCh12G007250
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRetrotransposon protein, putative, unclassified
LocationCma_Chr12 : 4243239 .. 4243892 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA

mRNA sequence

ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA

Coding sequence (CDS)

ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA

Protein sequence

MEGRTEGDSRERAHVLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRVRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQTLSPRRGIDHEIELIPTVKETTR
BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5BDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33
Identity = 86/209 (41.15%), Postives = 125/209 (59.81%), Query Frame = 1

Query: 11  ERAHVLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVG 70
           +R   ++A +N +  ++ L+D+ ATHNF+ + EARRL L   K+ G +K VNS A P  G
Sbjct: 433 KRLMYVEALVNGKATKA-LVDTGATHNFVAEDEARRLELQASKEGGWLKAVNSAAKPSHG 492

Query: 71  VSKRVRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRN----- 130
           V++ V   IG W G +D  VA MDDF +VLGM+FL + K +P+P  + + I +       
Sbjct: 493 VARGVSMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAILEEEKPCMV 552

Query: 131 PTVIPASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEVAT-TEETVPNEIKEALNSY 190
           PTV   ++K P    M+S +Q+K+GL REE T++A    E      E +P EI+  L+ +
Sbjct: 553 PTVTEGTLKTP----MLSAMQVKKGLKREEVTYLATLKEERDDGLREPMPKEIEGVLDEF 612

Query: 191 ADIMPESLPQTLSPRRGIDHEIELIPTVK 214
            D+MP  LP+ L PRR  DH+IEL P  K
Sbjct: 613 KDVMPPELPKRLPPRREEDHKIELEPGAK 636

BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5AUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 85/200 (42.50%), Postives = 124/200 (62.00%), Query Frame = 1

Query: 20  INSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRVRFKI 79
           +N     + L+DS ATHNF+  +EA RLGL + +D  ++K VNS+A  I GV+K V  KI
Sbjct: 370 VNPLQLLNALVDSGATHNFVATKEAARLGLRLEEDTSRIKAVNSKAQKIQGVAKNVPMKI 429

Query: 80  GDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMP-LEKCLVITDRNPTVIPASIKQPGN 139
           GDW G   L+   +DDFD++LG++FLL  KV  +P L   +V+ ++ P  + A   + G 
Sbjct: 430 GDWEGMCSLLCVPLDDFDLILGVDFLLRAKVALIPHLGGLMVLEEKQPCFVQALRAKDGG 489

Query: 140 L---RMISTIQLKRGLVREEPTFMA--IPLMEVATTEETVPNEIKEALNSYADIMPESLP 199
                M+S IQLK+GL R + T++A  I + E  T E  VP+ + + L  ++D+MP  LP
Sbjct: 490 KGQPEMLSAIQLKKGLKRGQETYVAALIEIKEGQTME--VPDSVVKILKEFSDVMPAELP 549

Query: 200 QTLSPRRGIDHEIELIPTVK 214
           + L PRR IDH+IEL+P  K
Sbjct: 550 KELPPRRPIDHKIELLPGTK 567

BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5AQF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014071 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32
Identity = 83/204 (40.69%), Postives = 122/204 (59.80%), Query Frame = 1

Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           ++A +N +  ++ L+D+ ATHNF+ + EARRL L   K+ G +K VNS A P  GV++ V
Sbjct: 137 VEAIVNGKATKA-LVDTGATHNFVSEDEARRLELQASKEGGWLKAVNSTAKPSHGVARGV 196

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRN-----PTVIP 135
              IG W G +D  VA MDDF +VLGM+FL + K +P+P  + +   +       PTV  
Sbjct: 197 TMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAFLEEEKSCMVPTVTE 256

Query: 136 ASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEV-ATTEETVPNEIKEALNSYADIMP 195
            ++K P    M+S +Q+K GL REE T++A    E    + E +P EI+  L+ + D+MP
Sbjct: 257 GTLKTP----MLSAMQVKNGLKREEVTYLATLKEEKDEGSGEPMPKEIEGVLDEFKDVMP 316

Query: 196 ESLPQTLSPRRGIDHEIELIPTVK 214
             LP+ L P+R  DH+IEL P  K
Sbjct: 317 PELPKRLPPKREEDHKIELEPGAK 335

BLAST of CmaCh12G007250 vs. TrEMBL
Match: A0A087PJF6_9PROT (Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 72/192 (37.50%), Postives = 117/192 (60.94%), Query Frame = 1

Query: 29  LIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRVRFKIGDWTGELDL 88
           L+D+ ATHNF+  +EA RLGL + K+PG +K VNS A PIVGV++ V+  IG W G++D 
Sbjct: 274 LVDTGATHNFMTSEEATRLGLRVTKEPGSVKTVNSAATPIVGVARNVQVDIGTWKGKIDF 333

Query: 89  VVARMDDFDVVLGMEFLLEHKVIPMPLEK--CLVITDRNPTVIPASIKQPGNLRMISTIQ 148
            + +MDD+ VV+G+EF+ + +  P+P     C++   R P ++P   +     + +S IQ
Sbjct: 334 TIVKMDDYGVVIGLEFMDKVRAFPIPFYNIFCILADGRQPCLVPLERQAKKCTQHLSAIQ 393

Query: 149 LKRGLVREEPTFMA-IPLMEVATTEETVPNEIKEALNSYADIMPESLPQTLSPRRGIDHE 208
             +   + E TF+A + L E       +  ++++ L  +AD+MP+ LP+ L PR+ +DH 
Sbjct: 394 FAKSWKKGEATFLATLILNEGEEKHGPLQKQVEDVLVEFADLMPKELPKKLPPRKEVDHA 453

Query: 209 IELIPTVKETTR 218
           IEL P  K  ++
Sbjct: 454 IELEPGAKPPSK 465

BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5AZ16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31
Identity = 87/218 (39.91%), Postives = 127/218 (58.26%), Query Frame = 1

Query: 2   EGRTEGDSRERAHVLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVV 61
           E   EGD++       A +N +  ++ L+D+ ATHNF+ + EARRL     K+ G +K V
Sbjct: 388 EKEKEGDAK-------ALVNGKATKA-LVDTSATHNFVSEDEARRLEFQASKEGGWLKAV 447

Query: 62  NSEALPIVGVSKRVRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVI 121
           NS A P  GV++ V   IG W G +D  VA MD F +VLG++FL + K +P+P  + + I
Sbjct: 448 NSAAKPSHGVARGVTMHIGSWEGRVDFTVAPMDHFKMVLGIDFLQKVKAVPLPFLRSMAI 507

Query: 122 TDRN-----PTVIPASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEVAT-TEETVPN 181
            +       PTV   ++K P    M+ST+Q+K+GL REE T++A    E    + E +P 
Sbjct: 508 LEEEKSCMVPTVTEGTLKTP----MLSTMQVKKGLKREEVTYLATLKEERDDGSGEPMPK 567

Query: 182 EIKEALNSYADIMPESLPQTLSPRRGIDHEIELIPTVK 214
           EI+  L+ + D+MP  LP+ L PRR  DH+IEL P  K
Sbjct: 568 EIEGVLDEFKDVMPPELPKRLPPRREEDHKIELEPGSK 593

BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009161831|ref|XP_015899105.1| (PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba])

HSP 1 Score: 196.8 bits (499), Expect = 3.8e-47
Identity = 93/198 (46.97%), Postives = 136/198 (68.69%), Query Frame = 1

Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DATIN +  +S ++D+ ATHNF  + EARRLGL + KD G+MK VNS+ALP VG++K+V
Sbjct: 259 VDATINGKAAKSVMVDTGATHNFCSESEARRLGLRLQKDAGQMKAVNSKALPTVGLAKQV 318

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
             K+G W   +DL+V  MDDFDV+LGM+FL++ K IP+P    L++      V+P   KQ
Sbjct: 319 PLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLLMMGEQTGVVPVQRKQ 378

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
             N +++S  Q K+G+ R+EP+++A+ +      +ET P  + +AL S+ D+MP++LP+ 
Sbjct: 379 LNNPKLLSAFQFKKGVRRKEPSYIALVVAREGEDDETTPPMVLDALKSFNDVMPDNLPRN 438

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRR IDH IELIP  K
Sbjct: 439 LPPRRDIDHNIELIPGAK 456

BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba])

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-46
Identity = 93/198 (46.97%), Postives = 136/198 (68.69%), Query Frame = 1

Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DA IN +  +S ++D+ ATHNF  + EARRLGL + KD G+MK VNS+ALP VG++K+V
Sbjct: 617 VDAAINGKAAKSVMVDTGATHNFCSEIEARRLGLRLQKDAGQMKAVNSKALPTVGLAKQV 676

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
             K+G W   +DL+V  MDDFDV+LGM+FL++ K IP+P    L++      VIP   KQ
Sbjct: 677 PLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLLMMGEQTGVIPVQRKQ 736

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
             N +++S +Q K+G+ R+EP+++A+ +      +ET P  + +AL S+ D+MP++LP+ 
Sbjct: 737 LNNPKLLSALQFKKGVRRKEPSYIALVVAREGEDDETTPPMVLDALKSFNDVMPDNLPRN 796

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRR IDH IELIP  K
Sbjct: 797 LPPRRDIDHNIELIPGAK 814

BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009181571|ref|XP_015872243.1| (PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba])

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 92/198 (46.46%), Postives = 135/198 (68.18%), Query Frame = 1

Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DA IN +  +S ++D+ ATHNF  + EARRLGL + KD G+MK VNS+ALP VG++K+V
Sbjct: 330 VDAAINGKAAKSVMVDTGATHNFCSEIEARRLGLRLQKDAGQMKAVNSKALPTVGLAKQV 389

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
             K+G W   +DL+V  MDDFDV+LGM+FL++ K IP+P    L++      V+P   KQ
Sbjct: 390 PLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLLMMGEQTGVVPVQRKQ 449

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
             N +++S +Q K+G+ R EP+++A+ +      +ET P  + +AL S+ D+MP++LP+ 
Sbjct: 450 LNNPKLLSALQFKKGVRRNEPSYIALVVAREGEDDETTPPMVLDALKSFNDVMPDNLPRN 509

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRR IDH IELIP  K
Sbjct: 510 LPPRRDIDHNIELIPGAK 527

BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009180560|ref|XP_015871689.1| (PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba])

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45
Identity = 90/198 (45.45%), Postives = 135/198 (68.18%), Query Frame = 1

Query: 16  LDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRV 75
           +DA IN +  +S ++D+ ATHNF  + EARRLGL + KD G+MK +NS+ALP VG++K+V
Sbjct: 283 VDAAINGKAAKSVMVDTGATHNFCSETEARRLGLCLQKDAGQMKAINSKALPTVGLAKQV 342

Query: 76  RFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQ 135
             K+G W   +DL+V  MDDFDV+LGM+FL++ K IP+P    L++      V+P   KQ
Sbjct: 343 PLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLLMMGEQTGVVPVQRKQ 402

Query: 136 PGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQT 195
             N +++S +Q K+G+  +EP+++A+ +      +ET P  + +AL S+ D+MP++LP+ 
Sbjct: 403 LNNPKLLSALQFKKGVRCKEPSYIALVVAREGEDDETTPPMVLDALKSFNDVMPDNLPRN 462

Query: 196 LSPRRGIDHEIELIPTVK 214
           L PRR IDH IELIP  K
Sbjct: 463 LPPRRDIDHNIELIPGAK 480

BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009165187|ref|XP_015900908.1| (PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba])

HSP 1 Score: 189.5 bits (480), Expect = 6.1e-45
Identity = 89/199 (44.72%), Postives = 134/199 (67.34%), Query Frame = 1

Query: 15  VLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKR 74
           ++DA IN +  +S ++D+ ATHNF  + E  RLGL + KD G+MK VNS+ALP VG++K+
Sbjct: 434 LMDAAINGKAAKSVMVDTGATHNFCSEIEIERLGLRLQKDAGQMKAVNSKALPTVGLAKQ 493

Query: 75  VRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIK 134
           V  K+G W   +DL+V  MDDFDV+LGM+FL++ K IP+P    L++       +P   K
Sbjct: 494 VPLKLGTWEDRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLLMMGEQTGEVPVQRK 553

Query: 135 QPGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQ 194
           Q  N +++S +Q K+G+ R+EP+++A+ +      +ET P  + +AL S+ D+MP++LP+
Sbjct: 554 QLNNPKLLSALQFKKGVRRKEPSYIALVVAREGEDDETTPPMVLDALKSFNDVMPDNLPR 613

Query: 195 TLSPRRGIDHEIELIPTVK 214
            L PRR IDH IELIP  K
Sbjct: 614 NLPPRRDIDHNIELIPGAK 632

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A5BDH9_VITVI2.2e-3341.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1[more]
A5AUJ7_VITVI2.9e-3342.50Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1[more]
A5AQF1_VITVI4.2e-3240.69Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014071 PE=4 SV=1[more]
A0A087PJF6_9PROT1.2e-3137.50Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1[more]
A5AZ16_VITVI1.6e-3139.91Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|1009161831|ref|XP_015899105.1|3.8e-4746.97PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba][more]
gi|1009175511|ref|XP_015868924.1|1.5e-4646.97PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba][more]
gi|1009181571|ref|XP_015872243.1|2.5e-4646.46PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba][more]
gi|1009180560|ref|XP_015871689.1|1.2e-4545.45PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba][more]
gi|1009165187|ref|XP_015900908.1|6.1e-4544.72PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G007250.1CmaCh12G007250.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13975gag-asp_proteascoord: 17..105
score: 2.

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G007250Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G007250Cucurbita moschata (Rifu)cmacmoB201
CmaCh12G007250Wild cucumber (PI 183967)cmacpiB192
CmaCh12G007250Cucumber (Chinese Long) v2cmacuB188
CmaCh12G007250Cucurbita pepo (Zucchini)cmacpeB181
CmaCh12G007250Cucurbita pepo (Zucchini)cmacpeB203