CmaCh12G007250 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA ATGGAAGGTCGAACCGAAGGAGATAGTAGAGAAAGGGCTCATGTTCTAGATGCGACAATAAATTCTCGACCGAGAAGGAGCACTCTGATAGATTCAAGAGCGACCCACAACTTCATTGTCGATCAAGAAGCCCGAAGATTGGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGTTGTCAACTCTGAGGCCTTACCTATTGTGGGAGTTTCCAAAAGAGTCCGCTTCAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTAGAACACAAAGTTATCCCAATGCCGCTGGAAAAATGCTTAGTGATCACCGACCGCAACCCCACAGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATTTCGACCATACAATTGAAAAGGGGACTCGTACGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAGCGACCACCGAAGAAACTGTCCCAAATGAAATCAAGGAGGCACTAAACAGCTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTATCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCACGGTTAAGGAAACAACTAGATGA MEGRTEGDSRERAHVLDATINSRPRRSTLIDSRATHNFIVDQEARRLGLTIGKDPGKMKVVNSEALPIVGVSKRVRFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLEKCLVITDRNPTVIPASIKQPGNLRMISTIQLKRGLVREEPTFMAIPLMEVATTEETVPNEIKEALNSYADIMPESLPQTLSPRRGIDHEIELIPTVKETTR
BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5BDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33 Identity = 86/209 (41.15%), Postives = 125/209 (59.81%), Query Frame = 1
BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5AUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33 Identity = 85/200 (42.50%), Postives = 124/200 (62.00%), Query Frame = 1
BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5AQF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014071 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 4.2e-32 Identity = 83/204 (40.69%), Postives = 122/204 (59.80%), Query Frame = 1
BLAST of CmaCh12G007250 vs. TrEMBL
Match: A0A087PJF6_9PROT (Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31 Identity = 72/192 (37.50%), Postives = 117/192 (60.94%), Query Frame = 1
BLAST of CmaCh12G007250 vs. TrEMBL
Match: A5AZ16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016761 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31 Identity = 87/218 (39.91%), Postives = 127/218 (58.26%), Query Frame = 1
BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009161831|ref|XP_015899105.1| (PREDICTED: uncharacterized protein LOC107432471 [Ziziphus jujuba]) HSP 1 Score: 196.8 bits (499), Expect = 3.8e-47 Identity = 93/198 (46.97%), Postives = 136/198 (68.69%), Query Frame = 1
BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba]) HSP 1 Score: 194.9 bits (494), Expect = 1.5e-46 Identity = 93/198 (46.97%), Postives = 136/198 (68.69%), Query Frame = 1
BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009181571|ref|XP_015872243.1| (PREDICTED: uncharacterized protein LOC107409324, partial [Ziziphus jujuba]) HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46 Identity = 92/198 (46.46%), Postives = 135/198 (68.18%), Query Frame = 1
BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009180560|ref|XP_015871689.1| (PREDICTED: uncharacterized protein LOC107408784 [Ziziphus jujuba]) HSP 1 Score: 191.8 bits (486), Expect = 1.2e-45 Identity = 90/198 (45.45%), Postives = 135/198 (68.18%), Query Frame = 1
BLAST of CmaCh12G007250 vs. NCBI nr
Match: gi|1009165187|ref|XP_015900908.1| (PREDICTED: uncharacterized protein LOC107434012 [Ziziphus jujuba]) HSP 1 Score: 189.5 bits (480), Expect = 6.1e-45 Identity = 89/199 (44.72%), Postives = 134/199 (67.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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