CmaCh12G007240 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G007240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSenescence-associated protein
LocationCma_Chr12 : 4186362 .. 4194608 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCGCCCCGCTCAGACATAGTTCACCATCTTTCGGGTTCCGACAGGCATGCTCACACTCGAACTCTTCTCAAAAGATCAAGGTCGGTCGGTGGTGCAACCCACAAAGGGATCCCACCAGTCAGCTTCCTTGCTCCTTACGAGTTTACTCGCCTGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGATGGGTCGAATGGGGAGCCCACAAGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGACGCATGTTGCTAGCCACGATCGGGACGACGACGTCTCCACAAGCGTAACAAAGGCCTGGGCTTTTGCCGCCATCTCAATCTGCATCGGTCCATGCTTCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCAGCCCCCATCNTACCAGCCATCAACCATCCTCAAGCCAGCCCAAGTTAGAAGGCAACATCGCAACATTCCAATCTCAACAAGGCTCATGTTGCACGCCCAAAGGCGCACCCGACAACTACCTCACCCTGCAAGTTTCGCGACCGCACTACCGCCATCAACCACCCTCGTCCGCCAACCACCACCCCCACACCCCATGCATATGCCCATGTGCGGCACATAGTGCTTGGGGCGTGGGGGTGGCGGAAGATATAGGGGGCGCCCCCGTGCCCAGCCCATGCAGACTAGTCACCCCCCTATATAGTACATTTTGAGGCATTTTTGGTCTGCCAGACCTAGATACGATTTTTCTGAGCCGTCATACGGTCAAATATCTCAAGTTTTAGAATGTTTTTTTCCGGGAACTCAACTCAAAAGTGTATGATTTATTGAAGGAGTAATGAGTATTTGTAGAATATAATATCTGTAAAGAAAATAAAATTAAGAGAGTAGTATGAGATTTATTTAATTGTATGTCTGATTTGTGTTAAGTATGTCTGTTGAATATTATGTACCTAAAGGGTAACAATTTTTGTGGAGTACTTCTTTACATTCTAATGAATCTATAAATCAAGTTTCATAATTTTTTTTAATGAATTTTTAAATATTAAATAATAGAAAATTAGAAAAAATAGCTAGAGTTCTCAAAAAAATCTGAAAATTTGTGGGAATCATGTTTTCATGTTTCTTACCTCCCAGAAAAAAAATTACAACAAACCGACCACTCCACACTTACTTTCACAATTAATGGGTGAGGGATGGTGCACGGGCGCGGGAGCGGGCATAGCTGAACCGGGAGGGGCCGACACGGGGCGCGCGGGAGACGCTGGCGGGGGGAGAGAGTGCGCGGAAGCACGCTGGCGGGGCGGGGCGGGAAGGGGCGCGCGCGCTGGAGATCAAGGGCGGGGCGGGGTGGGAGAGAGCGCGCGCGGGGGCAAGCGGGCGGGGCGTACGCGAGTTGGGCAGGGCGGGGCTGGCCAGAGCGCGGGAATGTTCCGACACTGCCCCACTGTGCGCGTTCCGCCACCGCACCACCGCCGTCAACCGCCCTCGACCTCCGACCACCACCTCAACGACCCAAGCATATGCCCATGTGCTGCGCATAGTGCTTGGGGCGTGGGGGTGGTGGAGGATATAGGGAGTACCCCCGTGCCCAGCCCATGCAGACTAGTCACCCCCCTATATAGTACATTTTGAGGCATTTTTGGTCTGCCAGGCCTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

ATGGCTTCGCCCCGCTCAGACATAGTTCACCATCTTTCGGGTTCCGACAGGCATGCTCACACTCGAACTCTTCTCAAAAGATCAAGGTCGGTCGGTGGTGCAACCCACAAAGGGATCCCACCAGTCAGCTTCCTTGCTCCTTACGAGTTTACTCGCCTGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGATGGGTCGAATGGGGAGCCCACAAGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGACGCATGTTGCTAGCCACGATCGGGACGACGACGTCTCCACAAGCGGATCCCACCAGTCAGCTTCCTTGCTCCTTACGAGTTTACTCGCCTGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGATGGGTCGAATGGGGAGCCCACAAGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGACGCATGTTGCTAGCCACGATCGGGACGACGACGTCTCCACAAGCGTAACAAAGGCCTGGGCTTTTGCCGCCATCTCAATCTGCATCGGTCCATGCTTCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCAGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGTGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCTCGGTCCGTCGCTGAGGACGCTTTTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGAAGTTACTAAGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTAA

Coding sequence (CDS)

ATGGCTTCGCCCCGCTCAGACATAGTTCACCATCTTTCGGGTTCCGACAGGCATGCTCACACTCGAACTCTTCTCAAAAGATCAAGGTCGGTCGGTGGTGCAACCCACAAAGGGATCCCACCAGTCAGCTTCCTTGCTCCTTACGAGTTTACTCGCCTGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGATGGGTCGAATGGGGAGCCCACAAGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGACGCATGTTGCTAGCCACGATCGGGACGACGACGTCTCCACAAGCGGATCCCACCAGTCAGCTTCCTTGCTCCTTACGAGTTTACTCGCCTGTTAACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGATGGGTCGAATGGGGAGCCCACAAGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAAAAGACGCATGTTGCTAGCCACGATCGGGACGACGACGTCTCCACAAGCGTAACAAAGGCCTGGGCTTTTGCCGCCATCTCAATCTGCATCGGTCCATGCTTCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCAGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGTGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCTCGGTCCGTCGCTGAGGACGCTTTTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGAAGTTACTAAGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTAA

Protein sequence

MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVRLLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQADPTSQLPCSLRVYSPVNSHTCQTPWSVFQDGSNGEPTSRCQEHADAEARQKTHVASHDRDDDVSTSVTKAWAFAAISICIGPCFKSIGGLAYHLSTSDWGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRGSERNGALTLSGAPFQGTCARSVAEDAFPDYNSNAEGARFSSWALPGSLEVTKGILVSFFSSAY
Homology
[Close]
BLAST of CmaCh12G007240 vs. TrEMBL
Match: A0A0R0GRT5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G012400 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 8.2e-47
Identity = 123/235 (52.34%), Postives = 140/235 (59.57%), Query Frame = 1 

Query: 1    MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
            +ASPRS IVHHLSG DR+A TRTL +RS SVGGATH+GIPP+SFLAPY FTR LTRTHVR
Sbjct: 1124 LASPRSGIVHHLSGPDRYALTRTLHRRSGSVGGATHRGIPPISFLAPYGFTRPLTRTHVR 1183

Query: 61   LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQADPTSQLPCSLRVYSPV 120
            LLGPCFK GRMGSPQADARS                      Q DPT+QLPC+LRV  P+
Sbjct: 1184 LLGPCFKTGRMGSPQADARSA---------------------QGDPTNQLPCALRVTRPL 1243

Query: 121  NSHTCQTPWSVFQDGSNGEPTSRCQEHADAEARQKTHVASHDRDDDVSTSVTKAWAFAAI 180
                  T   V   G       RC+    A A      A H+RDDDVSTS++ A A+A I
Sbjct: 1244 ------TRTHVRLLGPPTPGARRCRGTPRARA------AIHNRDDDVSTSISTARAWATI 1303

Query: 181  SICIGPCFKSIGGLAYHLSTSDWGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRGS 236
            +I +G C +SIGG A                       H LTLFSKSFSSFPRG+
Sbjct: 1304 AIRVGQCPESIGGPA---------------------LTHSLTLFSKSFSSFPRGT 1304

[Close]
BLAST of CmaCh12G007240 vs. TrEMBL
Match: A0A161WPR5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023431 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.5e-37
Identity = 79/103 (76.70%), Postives = 88/103 (85.44%), Query Frame = 1 

Query: 1   MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
           +ASPRS IVHHLSG DR+AHTRTLL+RSRSVGGA H+GIP +SFLAPY F   LTRTHVR
Sbjct: 778 LASPRSGIVHHLSGPDRNAHTRTLLRRSRSVGGAPHRGIPSISFLAPYGFNHPLTRTHVR 837

Query: 61  LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQ 104
           LLGPCFK GR+G+PQA ARSTQMP+HAKRR+L  TI  T SPQ
Sbjct: 838 LLGPCFKTGRLGNPQACARSTQMPRHAKRRVLPTTIDATASPQ 880

[Close]
BLAST of CmaCh12G007240 vs. TrEMBL
Match: A0A0R3QDU3_9BILA (Uncharacterized protein OS=Brugia timori PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.0e-33
Identity = 83/138 (60.14%), Postives = 91/138 (65.94%), Query Frame = 1 

Query: 98  TTTSPQADPTSQLPCSLRVYSPVNSHTCQTPWSVFQDGSNGEPTSRCQEHADAEARQKTH 157
           +   P  DP +QLPC+LRVY PV+SHTCQTPWSVFQDG NGE   RCQE A A       
Sbjct: 14  SAVQPVRDPANQLPCALRVYWPVDSHTCQTPWSVFQDGPNGELAGRCQERAGARGTPYG- 73

Query: 158 VASHDRDDDVSTSVTKAWAFAAISICIGPCFKSIGGLAYHLSTSDWGTSPAPIRFPPDNF 217
                R          AWA+A  +I IGP  +SIGG A   STSD G SPAPIRFPPDNF
Sbjct: 74  ARCQPRSRRRRLHRHTAWAWATAAIRIGPRPESIGGPACDRSTSDRGASPAPIRFPPDNF 133

Query: 218 KHYLTLFSKSFSSFPRGS 236
           KH LTLFSKSFSSFPRG+
Sbjct: 134 KHSLTLFSKSFSSFPRGT 150

[Close]
BLAST of CmaCh12G007240 vs. TrEMBL
Match: A0A0R0GHD3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G021500 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.3e-33
Identity = 74/103 (71.84%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 1   MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
           +ASPRS IVHHLSG DR+A TRTL +RS SVGGATH+GIPP+SFLAPY FTR LTRTHVR
Sbjct: 383 LASPRSGIVHHLSGPDRYALTRTLHRRSGSVGGATHRGIPPISFLAPYGFTRPLTRTHVR 442

Query: 61  LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQ 104
           LLGPCFK GRMGSPQADARS Q+P+HAK  +    +G   +P+
Sbjct: 443 LLGPCFKTGRMGSPQADARSAQVPRHAKGHINSPGLGHHRNPR 485

[Close]
BLAST of CmaCh12G007240 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.6e-32
Identity = 83/144 (57.64%), Postives = 97/144 (67.36%), Query Frame = 1 

Query: 96    IGTTTSPQADPTSQLPCSLRVYSPVNSHTCQTPWSVFQDGSNGEPTSRCQEHADAEARQK 155
             +G   +PQ DPT+QLPC+LRVYSPV+SHTCQTPWSVFQDG NGEPT R QE A AEARQ 
Sbjct: 15890 VGRRCNPQGDPTNQLPCALRVYSPVDSHTCQTPWSVFQDGPNGEPTGRRQERAGAEARQG 15949

Query: 156   THVASHDRDDDVSTSVTKAWAFAAISICIGPCFKSIGGL----AYHLSTSDWGTSPAPIR 215
               + S         +  +A+    +     P  +S+  +      H STSD  TSPAPIR
Sbjct: 15950 RALPS----TIAMMTSPRAYHSPGLGHHRNP-RRSMSRVDRRTGSHRSTSDRDTSPAPIR 16009

Query: 216   FPPDNFKHYLTLFSKSFSSFPRGS 236
             FPPDNFKH LTLFSKSFSSFPRG+
Sbjct: 16010 FPPDNFKHSLTLFSKSFSSFPRGT 16028

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BLAST of CmaCh12G007240 vs. NCBI nr
Match: gi|947068858|gb|KRH17749.1| (hypothetical protein GLYMA_13G012400 [Glycine max])

HSP 1 Score: 195.7 bits (496), Expect = 1.2e-46
Identity = 123/235 (52.34%), Postives = 140/235 (59.57%), Query Frame = 1 

Query: 1    MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
            +ASPRS IVHHLSG DR+A TRTL +RS SVGGATH+GIPP+SFLAPY FTR LTRTHVR
Sbjct: 1124 LASPRSGIVHHLSGPDRYALTRTLHRRSGSVGGATHRGIPPISFLAPYGFTRPLTRTHVR 1183

Query: 61   LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQADPTSQLPCSLRVYSPV 120
            LLGPCFK GRMGSPQADARS                      Q DPT+QLPC+LRV  P+
Sbjct: 1184 LLGPCFKTGRMGSPQADARSA---------------------QGDPTNQLPCALRVTRPL 1243

Query: 121  NSHTCQTPWSVFQDGSNGEPTSRCQEHADAEARQKTHVASHDRDDDVSTSVTKAWAFAAI 180
                  T   V   G       RC+    A A      A H+RDDDVSTS++ A A+A I
Sbjct: 1244 ------TRTHVRLLGPPTPGARRCRGTPRARA------AIHNRDDDVSTSISTARAWATI 1303

Query: 181  SICIGPCFKSIGGLAYHLSTSDWGTSPAPIRFPPDNFKHYLTLFSKSFSSFPRGS 236
            +I +G C +SIGG A                       H LTLFSKSFSSFPRG+
Sbjct: 1304 AIRVGQCPESIGGPA---------------------LTHSLTLFSKSFSSFPRGT 1304

[Close]
BLAST of CmaCh12G007240 vs. NCBI nr
Match: gi|1021022684|gb|KZM80574.1| (hypothetical protein DCAR_032095 [Daucus carota subsp. sativus])

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 82/104 (78.85%), Postives = 90/104 (86.54%), Query Frame = 1 

Query: 1   MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
           +ASPRS IVHHLSG DR+AHTRTLL+RSRSVGGA H+GIPP+SFLAPY F   LTRTHVR
Sbjct: 147 LASPRSGIVHHLSGPDRNAHTRTLLRRSRSVGGAPHRGIPPISFLAPYGFNHPLTRTHVR 206

Query: 61  LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQA 105
           LLGPCFK GRMG+PQA ARSTQMP+HAKRR+L  TI  T SPQA
Sbjct: 207 LLGPCFKTGRMGNPQACARSTQMPRHAKRRVLPTTIDATASPQA 250

[Close]
BLAST of CmaCh12G007240 vs. NCBI nr
Match: gi|1021028512|gb|KZM86297.1| (hypothetical protein DCAR_023431 [Daucus carota subsp. sativus])

HSP 1 Score: 163.3 bits (412), Expect = 6.5e-37
Identity = 79/103 (76.70%), Postives = 88/103 (85.44%), Query Frame = 1 

Query: 1   MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
           +ASPRS IVHHLSG DR+AHTRTLL+RSRSVGGA H+GIP +SFLAPY F   LTRTHVR
Sbjct: 778 LASPRSGIVHHLSGPDRNAHTRTLLRRSRSVGGAPHRGIPSISFLAPYGFNHPLTRTHVR 837

Query: 61  LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQ 104
           LLGPCFK GR+G+PQA ARSTQMP+HAKRR+L  TI  T SPQ
Sbjct: 838 LLGPCFKTGRLGNPQACARSTQMPRHAKRRVLPTTIDATASPQ 880

[Close]
BLAST of CmaCh12G007240 vs. NCBI nr
Match: gi|1021535497|ref|XP_016164793.1| (PREDICTED: uncharacterized protein LOC107607340 [Arachis ipaensis])

HSP 1 Score: 160.2 bits (404), Expect = 5.5e-36
Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 1 

Query: 110 LPCSLRVYSPVNSHTCQTPWSVFQDGSNGEPTSRCQEHADAEARQKTHVASHDRDDDVST 169
           LPC+LRVYSPV+SHTCQTPWSVFQDG NGEPT R  E A AEARQ+   A H+R+DDVS 
Sbjct: 223 LPCALRVYSPVDSHTCQTPWSVFQDGPNGEPTGRRPERAGAEARQRARAAFHNRNDDVSA 282

Query: 170 SVTKAWAFAAISICIGPCFKSIGGLA--YHLSTSDWGTSPAPIRFPPDNFKHYLTLFSKS 229
            ++ A A+A I+I IG   +SIG  A  +H+     G SPAPIRFPPDNFKH LTLFSKS
Sbjct: 283 GLSTARAWATIAIRIGRRPESIGRPASPFHIRP---GASPAPIRFPPDNFKHSLTLFSKS 342

Query: 230 FSSFPRGS 236
           FSSFPRG+
Sbjct: 343 FSSFPRGT 347

[Close]
BLAST of CmaCh12G007240 vs. NCBI nr
Match: gi|947068959|gb|KRH17850.1| (hypothetical protein GLYMA_13G021500 [Glycine max])

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33
Identity = 74/103 (71.84%), Postives = 85/103 (82.52%), Query Frame = 1 

Query: 1   MASPRSDIVHHLSGSDRHAHTRTLLKRSRSVGGATHKGIPPVSFLAPYEFTRLLTRTHVR 60
           +ASPRS IVHHLSG DR+A TRTL +RS SVGGATH+GIPP+SFLAPY FTR LTRTHVR
Sbjct: 383 LASPRSGIVHHLSGPDRYALTRTLHRRSGSVGGATHRGIPPISFLAPYGFTRPLTRTHVR 442

Query: 61  LLGPCFKMGRMGSPQADARSTQMPKHAKRRMLLATIGTTTSPQ 104
           LLGPCFK GRMGSPQADARS Q+P+HAK  +    +G   +P+
Sbjct: 443 LLGPCFKTGRMGSPQADARSAQVPRHAKGHINSPGLGHHRNPR 485

The following BLAST results are available for this feature:
BLAST of CmaCh12G007240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh12G007240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0R0GRT5_SOYBN8.2e-4752.34Uncharacterized protein OS=Glycine max GN=GLYMA_13G012400 PE=4 SV=1[more]
A0A161WPR5_DAUCA4.5e-3776.70Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_023431 PE=4 SV=1[more]
A0A0R3QDU3_9BILA1.0e-3360.14Uncharacterized protein OS=Brugia timori PE=4 SV=1[more]
A0A0R0GHD3_SOYBN2.3e-3371.84Uncharacterized protein OS=Glycine max GN=GLYMA_13G021500 PE=4 SV=1[more]
I1LXS9_SOYBN2.6e-3257.64Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
BLAST of CmaCh12G007240 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh12G007240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|947068858|gb|KRH17749.1|1.2e-4652.34hypothetical protein GLYMA_13G012400 [Glycine max][more]
gi|1021022684|gb|KZM80574.1|1.2e-3878.85hypothetical protein DCAR_032095 [Daucus carota subsp. sativus][more]
gi|1021028512|gb|KZM86297.1|6.5e-3776.70hypothetical protein DCAR_023431 [Daucus carota subsp. sativus][more]
gi|1021535497|ref|XP_016164793.1|5.5e-3666.41PREDICTED: uncharacterized protein LOC107607340 [Arachis ipaensis][more]
gi|947068959|gb|KRH17850.1|3.3e-3371.84hypothetical protein GLYMA_13G021500 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G007240.1CmaCh12G007240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33047FAMILY NOT NAMEDcoord: 96..297
score: 4.2
NoneNo IPR availablePANTHERPTHR33047:SF4SUBFAMILY NOT NAMEDcoord: 96..297
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G007240Cucurbita pepo (Zucchini)cmacpeB181
CmaCh12G007240Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G007240Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G007240Cucurbita moschata (Rifu)cmacmoB201
CmaCh12G007240Wild cucumber (PI 183967)cmacpiB192
CmaCh12G007240Cucumber (Chinese Long) v2cmacuB188