CmaCh12G006710 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G006710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCytochrome c oxidase subunit 3
LocationCma_Chr12 : 3607833 .. 3610945 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTATGGTGGCGTGATGTTCTACGTGAATCCACGTTGGAAGGACATCATACCAAAGTAGTACAATTAGGACTTCGATATGGTTTTATTCTGTTTATCGTATCGGAGGTTATGTTCTTTTTTTCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGACTCATCATACTATACTCGCGGGGAAGGAAAAACGAGCTGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACTGGCTTTCATGGTTTTCATGTGGTTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACTAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGAAAGAACAAAACAGTGCATTGAGGAATTCAAGCTCGAAGACAAAGAGAACCGGGCTTTTCCAAAGAATTACAGCAGCTTTCCTTCTTCCTTTAATTATTATATACAAAAAAGTCTCTTCCACTTTCCTACCAAATCTATCTGTAGTCTGGCACATAAATTCAGGGATCGAAGAGATTATGGCAGATCATGTTCACCAAGAAATGACCCGAAATTGGATCTTAGTCTATTTGAGATTGTTCCTTTTAATCGTAATCATAGATGTTTTCTTCTCTCTCATTTCTTTTCCGAATAAATCGAAGAACCTAATGGATCGAACTCATCCTTCCTTGGCTGCTATGCAAGATATCGCCCTTGCGTTGCGGAAGGAACGTTCTCTTCTCTTTTGAGTTTCAGGCAAGAGCTCTTTCTTCAATAAAGGGTTGGAACTCTCATCTTTCCCCGGGAAGAATATGGTATGGGCTTGTTGAAGCTATGAAGCATCTTAGAGTATTCCATTCCGTTTTTCAGCTGGATCCGGGCTTGGTTCGACCTGAAAAAACGGCGATTTAGTAGAGAGAGAGAGAGAAGTTTGCGAAAGAAAGGCTATCAACGTAGTAGTATATAGATAGAGTGAGTGTGCAGGGTGTAGGTATACCACTTACGAGAAAGAACCCCAAGTAAAGTAGTTAACTAAAGACAAGTAAGTAGTTCGTCAGTCCTTCCTCCGACGCCTCCCGTTCATTTTCATTCTTTCTTTCTTTCATGTTTTTTGTTTTGTTTCTTCATAGGTCCCAAGCCCTTCTTATCAAGCCCTCCTTAAGTAAAAAAAAAAGAATGCTGCTTTATTTGAACGAACATTGTAAGAACCTTTCTAACTGACACCCCAGTCATAATGTCACCCACGTCTTTTTGAACAAAGACTTTTTTGTCTTTTTGATTTGAGTTAATAATAAATAAATAACTGGCAGGTTTCATTAATGAAAAGAAAAGCGGAGGCCCGCCATCTGCTAGCATTGTGGTTTGGAATCGATTCTTTATCAATGTCCCACCCTTTCTTTGAACCTTGTCAATGATCGAACTTAAAGATATGAACTGAGTGCCATTTGATGAGTAACTGAGAACAAGGGAGAGGGATATGGAAAGGATGAAGTAATGAAAGAGGAAATCATTGCTAGTAGTAACGACTTGTCACGATCCATTGGTTCATATAGAATCCATGTCCTAGGTGTATCAAAAAAACATGATTTTCGCTAAGCGTATATAATAAAATAGAGTGAAAGGGTACACCCCGAAACCAAGGGCGTACTAACTAAGAGCTGAGTCCTCTCCGAACCGCAAGAGATAGTTGCCCATCATACGGCTCACCAACTTCACTTGCCTCTATGGGAGGCTCGCTCCGGGCAGGTTCGAATCACTTACAATACACGGCTCTACGAAGGAAGGGCTTGGTGGGTTAGTAACGCATTTTCAATATGATGATTTTTCTGTATTTGTTTGATGAGAAATGCGAGACGAAAAAGGAACTCATCTTTTCGACTGGGAAATGCAAGTATGTTTTGTCCACTTTCTCCATCCCCCTCTATCAAAATAAAAAAAAAGGCGAGCTTGCTTCTTATTCCCGTGTTCGATCTCTTCCATCTCTGCCTCTCTCGTTGTCACCTATGTTGAAGAAAGGTTTGGAACCCTGTAGAGAATGAAGAGGGGCCAAGCATCTTCCTCTCAACAGTGCTTCTTGAGGCTCCACTCTCCCCGTAAGGCCCCGTTAGCCTGGGCGAGGGGATAAGGAATAAGGATTGAATGAAGCCCCCTTCCTTAGCTCTGCGAGGGACTGTACAAGGGTTAGCTTTGTAAATGTGTAGAGCCAAGTGTAGTGTGGTGTAGTAGTAAGCACTTCTAGGCCCCTTCCCGGCTACAGGATGACTCCAGTGCTTTGGGTACTACGGACCCTCTGCCATCCATTGCAGCAGAGTCGTTTCATGAGCGGGGGGGCTAAGCGCAGTTCTTTGAATCAACCGTTGAATGAAATCGATTCTTTTTTAGATATCAAAATCGAATCTCGATAGATTCATCCATCTTTCTATTCATAGATCTGACTAAAAAAATGGATTGAAGTAGCGTGAAGCCCCAAATCCTTGATTTGGCCAGGAAAGACTGCACTGCTTTGGGCCCAGGAAGCGAAGGGAATGAGCTCGGTTCTTCTCCACACTGATTTTTTTGATCTGTGTCCGTTCCGCGCGCGATTGGCGCTTTGTTCTCCTCTTATTCTTCATTGGACGGTTCGGATGGACTTCGCCGTTCTTTCCCAACTCAAATTGAAAAGGCTGTCTCACATCGAGATGTCGATTCGTTTTCCGCCTCCAATGAGATGGGGAATTAGTAACCCCCTATTTCGTTTGGCCCTGAATTTTTCTGAATCGAGGCCCGGCTCGCGTCGTTCCAACAACCGGCGGGGAGCACCTCAGTATACGATCGCGCGCAGTAACTGGGAGTCCTATTACACCTAA

mRNA sequence

ATGTTCGTATGGTGGCGTGATGTTCTACGTGAATCCACGTTGGAAGGACATCATACCAAAGTAGTACAATTAGGACTTCGATATGGTTTTATTCTGTTTATCGTATCGGAGGTTATGTTCTTTTTTTCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGACTCATCATACTATACTCGCGGGGAAGGAAAAACGAGCTGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACTAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGAAAGACTGCACTGCTTTGGGCCCAGGAAGCGAAGGGAATGAGCTCGGTTCTTCTCCACACTGATTTTTTTGATCTGTGTCCGTTCCGCGCGCGATTGGCGCTTTGTTCTCCTCTTATTCTTCATTGGACGGTTCGGATGGACTTCGCCGTTCTTTCCCAACTCAAATTGAAAAGGCTGTCTCACATCGAGATGTCGATTCGTTTTCCGCCTCCAATGAGATGGGGAATTAGTAACCCCCTATTTCGTTTGGCCCTGAATTTTTCTGAATCGAGGCCCGGCTCGCGTCGTTCCAACAACCGGCGGGGAGCACCTCAGTATACGATCGCGCGCAGTAACTGGGAGTCCTATTACACCTAA

Coding sequence (CDS)

ATGTTCGTATGGTGGCGTGATGTTCTACGTGAATCCACGTTGGAAGGACATCATACCAAAGTAGTACAATTAGGACTTCGATATGGTTTTATTCTGTTTATCGTATCGGAGGTTATGTTCTTTTTTTCTTTTTTTCGGGCTTCTTCTCATTCTTCTTTGGCACCCACGGTAGAGATCGGAGGTATTTGGCCCCCAAAAGGGATTGGGGTTTTAGATCCTCGGGAAATCCCTTTTCTTAATACCCCTATTCTCCTTTCATCCGGAGCTGCCGTAACTTGGACTCATCATACTATACTCGCGGGGAAGGAAAAACGAGCTGTTTACGCTTTAGTAGCTACCGTTTCACTGGCTCTAGTATTCACAGGCTTTCAAGGAATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACTAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGAAAGACTGCACTGCTTTGGGCCCAGGAAGCGAAGGGAATGAGCTCGGTTCTTCTCCACACTGATTTTTTTGATCTGTGTCCGTTCCGCGCGCGATTGGCGCTTTGTTCTCCTCTTATTCTTCATTGGACGGTTCGGATGGACTTCGCCGTTCTTTCCCAACTCAAATTGAAAAGGCTGTCTCACATCGAGATGTCGATTCGTTTTCCGCCTCCAATGAGATGGGGAATTAGTAACCCCCTATTTCGTTTGGCCCTGAATTTTTCTGAATCGAGGCCCGGCTCGCGTCGTTCCAACAACCGGCGGGGAGCACCTCAGTATACGATCGCGCGCAGTAACTGGGAGTCCTATTACACCTAA

Protein sequence

MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIGGIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVFTGFQGMEYYQAPFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGKTALLWAQEAKGMSSVLLHTDFFDLCPFRARLALCSPLILHWTVRMDFAVLSQLKLKRLSHIEMSIRFPPPMRWGISNPLFRLALNFSESRPGSRRSNNRRGAPQYTIARSNWESYYT
Homology
[Close]
BLAST of CmaCh12G006710 vs. Swiss-Prot
Match: COX3_VICFA (Cytochrome c oxidase subunit 3 OS=Vicia faba GN=COX3 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-97
Identity = 178/208 (85.58%), Postives = 180/208 (86.54%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLG RYG I FIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGPRYGSISFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLG +TKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGQMTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. Swiss-Prot
Match: COX3_OENBE (Cytochrome c oxidase subunit 3 OS=Oenothera berteroana GN=COX3 PE=3 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 3.3e-97
Identity = 178/208 (85.58%), Postives = 180/208 (86.54%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYG ILFIVSEVMF F+FF ASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGSILFIVSEVMFLFAFFWASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDP EIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLA+VF
Sbjct: 117 GIWPPKGIGVLDPWEIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLAIVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAP TISDS                    TLF IICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPPTISDSIYGSTFYLATGFHGFHVIIGTLFSIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. Swiss-Prot
Match: COX3_HELAN (Cytochrome c oxidase subunit 3 OS=Helianthus annuus GN=COX3 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 8.2e-96
Identity = 175/208 (84.13%), Postives = 177/208 (85.10%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLG RYGFILFIVSEVMF F+ FRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGPRYGFILFIVSEVMFLFALFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGI VLDPREIPFLNTPI LSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIAVLDPREIPFLNTPIPLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           T FQGMEYYQAP TISDS                    TLF I+CGIRQYLGHLTKEHHV
Sbjct: 177 TAFQGMEYYQAPSTISDSIYGSTFFLATGFHGFHVIIGTLFSIVCGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. Swiss-Prot
Match: COX3_ARATH (Cytochrome c oxidase subunit 3 OS=Arabidopsis thaliana GN=COX3 PE=2 SV=2)

HSP 1 Score: 349.7 bits (896), Expect = 3.1e-95
Identity = 176/208 (84.62%), Postives = 177/208 (85.10%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFF+FF A  HSSLAP VEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFAFFWAFFHSSLAPAVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGI VLDP EIPFLNT ILLSSGAAVTW HH ILAGKEKRAVYALVATV LALVF
Sbjct: 117 GIWPPKGIEVLDPWEIPFLNTLILLSSGAAVTWAHHAILAGKEKRAVYALVATVLLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. Swiss-Prot
Match: COX3_SOYBN (Cytochrome c oxidase subunit 3 OS=Glycine max GN=COX3 PE=2 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 5.3e-95
Identity = 176/208 (84.62%), Postives = 177/208 (85.10%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLG RYG I FIVSEVMF F+FF ASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGPRYGSIPFIVSEVMFLFAFFWASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPP GI VLDP EIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPLGIWVLDPWEIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TrEMBL
Match: G3EJ02_CUCSA (Cytochrome c oxidase subunit 3 OS=Cucumis sativus GN=cox3 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 6.6e-100
Identity = 183/208 (87.98%), Postives = 185/208 (88.94%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLI+CGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TrEMBL
Match: G3EU17_CUCME (Cytochrome c oxidase subunit 3 OS=Cucumis melo subsp. melo GN=cox3 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-99
Identity = 182/208 (87.50%), Postives = 185/208 (88.94%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGF+LFIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFLLFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLI+CGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TrEMBL
Match: A0A0B4L2E6_9ROSA (Cytochrome c oxidase subunit 3 (Fragment) OS=Fragaria chiloensis GN=cox3 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-98
Identity = 182/208 (87.50%), Postives = 183/208 (87.98%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFI FIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFIPFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TrEMBL
Match: A0A0B4L0J6_9ROSA (Cytochrome c oxidase subunit 3 (Fragment) OS=Fragaria virginiana GN=cox3 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-98
Identity = 182/208 (87.50%), Postives = 183/208 (87.98%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFI FIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFIPFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TrEMBL
Match: A0A0U2HUH4_9ROSA (Cytochrome c oxidase subunit 3 OS=Malus hupehensis var. mengshanensis GN=cox3 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-98
Identity = 182/208 (87.50%), Postives = 183/208 (87.98%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFI FIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFIPFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TAIR10
Match: AT2G07687.1 (AT2G07687.1 Cytochrome c oxidase, subunit III)

HSP 1 Score: 349.7 bits (896), Expect = 1.8e-96
Identity = 176/208 (84.62%), Postives = 177/208 (85.10%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLG RYG ILFIVSEVMFFF+FF ASSHSSLAP VEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGPRYGSILFIVSEVMFFFAFFWASSHSSLAPAVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGI VLDP EIPFLNTPIL SSGAAVTW HH ILAGKEKRAVYALVATV LALVF
Sbjct: 117 GIWPPKGIEVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVATVLLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. TAIR10
Match: ATMG00730.1 (ATMG00730.1 cytochrome c oxidase subunit 3)

HSP 1 Score: 349.7 bits (896), Expect = 1.8e-96
Identity = 176/208 (84.62%), Postives = 177/208 (85.10%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLG RYG ILFIVSEVMFFF+FF ASSHSSLAP VEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGPRYGSILFIVSEVMFFFAFFWASSHSSLAPAVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGI VLDP EIPFLNTPIL SSGAAVTW HH ILAGKEKRAVYALVATV LALVF
Sbjct: 117 GIWPPKGIEVLDPWEIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVATVLLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVV LFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVWLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. NCBI nr
Match: gi|346683388|ref|YP_004849350.1| (cytochrome c oxidase subunit 3 [Cucumis sativus])

HSP 1 Score: 372.1 bits (954), Expect = 9.4e-100
Identity = 183/208 (87.98%), Postives = 185/208 (88.94%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLI+CGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. NCBI nr
Match: gi|345034414|gb|AEN56100.1| (cytochrome c oxidase subunit 3 [Cucumis melo subsp. melo])

HSP 1 Score: 371.3 bits (952), Expect = 1.6e-99
Identity = 182/208 (87.50%), Postives = 185/208 (88.94%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGF+LFIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFLLFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLI+CGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIVCGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLFLFVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. NCBI nr
Match: gi|404481703|ref|YP_006666135.1| (cytochrome c oxidase subunit III (mitochondrion) [Malus domestica])

HSP 1 Score: 367.1 bits (941), Expect = 3.0e-98
Identity = 182/208 (87.50%), Postives = 183/208 (87.98%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFI FIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFIPFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. NCBI nr
Match: gi|571034537|gb|AHF22721.1| (cytochrome c oxidase subunit 3, partial (mitochondrion) [Fragaria mandshurica])

HSP 1 Score: 364.8 bits (935), Expect = 1.5e-97
Identity = 181/208 (87.02%), Postives = 182/208 (87.50%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFI FIVSEVMF F+FFRAS HSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFIPFIVSEVMFLFAFFRASFHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

[Close]
BLAST of CmaCh12G006710 vs. NCBI nr
Match: gi|984914857|gb|AMC32855.1| (cytochrome c oxidase subunit 3 (mitochondrion) [Prunus virginiana])

HSP 1 Score: 364.0 bits (933), Expect = 2.6e-97
Identity = 181/208 (87.02%), Postives = 182/208 (87.50%), Query Frame = 1 

Query: 1   MFVWWRDVLRESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFSFFRASSHSSLAPTVEIG 60
           MFVWWRDVLRESTLEGHHTKVVQLGLRYGFI FIVSEVMF F+FFRASSHSSLAPTVEIG
Sbjct: 57  MFVWWRDVLRESTLEGHHTKVVQLGLRYGFIPFIVSEVMFLFAFFRASSHSSLAPTVEIG 116

Query: 61  GIWPPKGIGVLDPREIPFLNTPILLSSGAAVTWTHHTILAGKEKRAVYALVATVSLALVF 120
           GIWPPKGI VLDPREIPFLNTPILLSSGAAVTW HH ILAGKEKRAVYALVATVSLALVF
Sbjct: 117 GIWPPKGIWVLDPREIPFLNTPILLSSGAAVTWAHHAILAGKEKRAVYALVATVSLALVF 176

Query: 121 TGFQGMEYYQAPFTISDS--------------------TLFLIICGIRQYLGHLTKEHHV 180
           TGFQGMEYYQAPFTISDS                    TLFLIICGIRQYLGHLTKEHHV
Sbjct: 177 TGFQGMEYYQAPFTISDSIYGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHV 236

Query: 181 GFEAAAWYWHFVDVVRLFLFVSIYWWGG 189
           GFEAAAWYWHFVDVVRLF FVSIYWWGG
Sbjct: 237 GFEAAAWYWHFVDVVRLFPFVSIYWWGG 264

The following BLAST results are available for this feature:
BLAST of CmaCh12G006710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX3_VICFA1.2e-9785.58Cytochrome c oxidase subunit 3 OS=Vicia faba GN=COX3 PE=3 SV=1[more]
COX3_OENBE3.3e-9785.58Cytochrome c oxidase subunit 3 OS=Oenothera berteroana GN=COX3 PE=3 SV=2[more]
COX3_HELAN8.2e-9684.13Cytochrome c oxidase subunit 3 OS=Helianthus annuus GN=COX3 PE=3 SV=1[more]
COX3_ARATH3.1e-9584.62Cytochrome c oxidase subunit 3 OS=Arabidopsis thaliana GN=COX3 PE=2 SV=2[more]
COX3_SOYBN5.3e-9584.62Cytochrome c oxidase subunit 3 OS=Glycine max GN=COX3 PE=2 SV=1[more]
BLAST of CmaCh12G006710 vs. TrEMBL
Match NameE-valueIdentityDescription
G3EJ02_CUCSA6.6e-10087.98Cytochrome c oxidase subunit 3 OS=Cucumis sativus GN=cox3 PE=3 SV=1[more]
G3EU17_CUCME1.1e-9987.50Cytochrome c oxidase subunit 3 OS=Cucumis melo subsp. melo GN=cox3 PE=3 SV=1[more]
A0A0B4L2E6_9ROSA2.1e-9887.50Cytochrome c oxidase subunit 3 (Fragment) OS=Fragaria chiloensis GN=cox3 PE=3 SV... [more]
A0A0B4L0J6_9ROSA2.1e-9887.50Cytochrome c oxidase subunit 3 (Fragment) OS=Fragaria virginiana GN=cox3 PE=3 SV... [more]
A0A0U2HUH4_9ROSA2.1e-9887.50Cytochrome c oxidase subunit 3 OS=Malus hupehensis var. mengshanensis GN=cox3 PE... [more]
BLAST of CmaCh12G006710 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07687.11.8e-9684.62 Cytochrome c oxidase, subunit III[more]
ATMG00730.11.8e-9684.62ATMG00730.1 cytochrome c oxidase subunit 3[more]
BLAST of CmaCh12G006710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|346683388|ref|YP_004849350.1|9.4e-10087.98cytochrome c oxidase subunit 3 [Cucumis sativus][more]
gi|345034414|gb|AEN56100.1|1.6e-9987.50cytochrome c oxidase subunit 3 [Cucumis melo subsp. melo][more]
gi|404481703|ref|YP_006666135.1|3.0e-9887.50cytochrome c oxidase subunit III (mitochondrion) [Malus domestica][more]
gi|571034537|gb|AHF22721.1|1.5e-9787.02cytochrome c oxidase subunit 3, partial (mitochondrion) [Fragaria mandshurica][more]
gi|984914857|gb|AMC32855.1|2.6e-9787.02cytochrome c oxidase subunit 3 (mitochondrion) [Prunus virginiana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000298Cyt_c_oxidase-like_su3
IPR013833Cyt_c_oxidase_su3_a-hlx
IPR024791Cyt_c/ubiquinol_Oxase_su3
Vocabulary: Molecular Function
TermDefinition
GO:0015002heme-copper terminal oxidase activity
GO:0004129cytochrome-c oxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0022904respiratory electron transport chain
GO:0019646aerobic electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019646 aerobic electron transport chain
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0022904 respiratory electron transport chain
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0016020 membrane
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0015002 heme-copper terminal oxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G006710.1CmaCh12G006710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000298Cytochrome c oxidase subunit III domainPFAMPF00510COX3coord: 139..187
score: 4.0E-17coord: 1..139
score: 8.4
IPR000298Cytochrome c oxidase subunit III domainPROFILEPS50253COX3coord: 1..188
score: 33
IPR000298Cytochrome c oxidase subunit III domainunknownSSF81452Cytochrome c oxidase subunit III-likecoord: 1..187
score: 1.03
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleGENE3DG3DSA:1.20.120.80coord: 140..187
score: 5.0E-15coord: 18..139
score: 8.9
IPR024791Cytochrome c oxidase subunit IIIPANTHERPTHR11403CYTOCHROME C OXIDASE SUBUNIT IIIcoord: 1..190
score: 4.4E
NoneNo IPR availableGENE3DG3DSA:1.10.287.70coord: 1..17
score: 9.
NoneNo IPR availablePANTHERPTHR11403:SF7CYTOCHROME C OXIDASE SUBUNIT 3coord: 1..190
score: 4.4E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G006710Cucumber (Gy14) v2cgybcmaB480
CmaCh12G006710Cucumber (Gy14) v2cgybcmaB718
CmaCh12G006710Melon (DHL92) v3.6.1cmamedB179
CmaCh12G006710Melon (DHL92) v3.6.1cmamedB199
CmaCh12G006710Silver-seed gourdcarcmaB0172
CmaCh12G006710Silver-seed gourdcarcmaB0289
CmaCh12G006710Silver-seed gourdcarcmaB0502
CmaCh12G006710Cucumber (Chinese Long) v3cmacucB0224
CmaCh12G006710Watermelon (97103) v2cmawmbB200
CmaCh12G006710Wax gourdcmawgoB0205
CmaCh12G006710Cucurbita maxima (Rimu)cmacmaB181
CmaCh12G006710Cucurbita maxima (Rimu)cmacmaB201
CmaCh12G006710Cucumber (Gy14) v1cgycmaB0129
CmaCh12G006710Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G006710Cucurbita moschata (Rifu)cmacmoB201
CmaCh12G006710Wild cucumber (PI 183967)cmacpiB188
CmaCh12G006710Wild cucumber (PI 183967)cmacpiB198
CmaCh12G006710Cucumber (Chinese Long) v2cmacuB195
CmaCh12G006710Melon (DHL92) v3.5.1cmameB164
CmaCh12G006710Melon (DHL92) v3.5.1cmameB183
CmaCh12G006710Watermelon (Charleston Gray)cmawcgB175
CmaCh12G006710Watermelon (97103) v1cmawmB153
CmaCh12G006710Cucurbita pepo (Zucchini)cmacpeB181
CmaCh12G006710Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G006710Bottle gourd (USVL1VR-Ls)cmalsiB190