CmaCh12G006700 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G006700
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNADH-quinone oxidoreductase subunit N
LocationCma_Chr12 : 3604690 .. 3607740 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTATGGGTCTACTGGAGCTACCCACTTCGATCAATTAGCCAATATTTTGACCGGATACGAAATCACTGGTGCTCGATCTAGTGGTATTTTTATGGGGATTCTATCTATCGCTGTAGGATTCCTATTCAAGATCACTGCAGTTCCTTTTCGGGCGGCTGTAGGACGGACGGCCGCCTATAGGTGGTAGGGTAGGGTGGGTGGTACCGCTCAGATTGTGGCCAATCTTCCTAACCGCGCGCGGGCCGAGCTTAGAGCGCGTGAAACTCATCACTACCTCGTAAGGGCGTTGAGACCATAGCATGTTACACGAAAGCGCCGCTTTCTCTGTAGTCTTGTCACACAGCAGCCCGCCTAGAAGAGCCACTCGCTCTGTAGTGTTGTCACATAAGATAAGCACTAGCCCGCCTGATGGCCGGGCGAATCTAAGTTCTCTTCCGTTCAACTGTCCACCCAGTCAAGTGCAAAAAACACAGTAGAATCACGCAAGGCATCGAGCTGGTGTGCTTCCTGCCCGCGAGGAAAGAAAGAAGAGCGACAGGGTTGAGTTCAGATTTGACTGTTTGCAGCATGGGAGCAGATTACCCAAAAAATCCCTGGGAACAATGAAAAAAAAGATATCTCGGTAACGAAAACTATGGGGGGCTGTATTGGCGAGATCCAACGGTGGACAGCTGCCCAAAAGAAAAGCCGCCTGGAAGTCCGAGGACCTTTAGTACCCTACCCCCAAACCACCTTCGCGCCAAGCAAGACCGCCCTTGTCCCTTTCCTTTCTCCATTCCGCCTCCCCTTCTTTCTGAGCTTTGTTCCAATCGAGTCTAAGGCAAAGCAAAAGTCGTTCGTATACCTCTTTTTTGACCTACTTGACGAAAGGGAACAAAGTTTCGTTTCCGGGGTTTATGGATTGGATTCAGTCAGCTAAACTCATTCCTTTTTATTATGTTGTGACGGGTTACCGGCGAACGCTTCCAAAGGCGACCCTCTCGAGTTTCCGGCGGTTTACGTCATTGAAGTAGTCTTTCGTCATCCTACCAAACTAAAGAAGTCACTATCAAGCAGCGAGCCCTTATTAGTTTAGTAAAGTCAAGCTAAAAAAACGAGAGATTAACCTGCGGTGCGCTACGCCCGGCAACTCATGAAGTAGGGCTCCTTCCTATTGACTAAAGGTGGATTCTTCGCTTTCCTTGAGAATGAAAGAAAGTAGCTATTCAGCCCCTACTACTGACTTTTGACTTTGTTTGATTCAAAAGGCGAACAGCCAGCCCCCTCAACTAGTCGTATGAGGTGGGGTGCTTGTGGTAAGCCGCTTTGGATATGAGGAATTCCTAAAAAAAAGAAAAGGCAAAGTCCGGTATTTGACGAAGATCTTTCGATCAATAGATAGGATTTAATGTTCAATATAGGGGATAGGATCCATTCTTTCTCAATTTGATTTAGAGAGAGAGATATAACGATATCAAAACAAAGAAATAGGGAGATGATAAAGAATACATAGACAGAAAAAGGGATGTCTATTCTATTCCTCTTTGTTTCTTTTTCAGTGCAAGACAGGAAACCTCCTTTTGTCATCCCTGCAGCTTTCTTTTGTATTGAACGCATGGCCTAGGACCTGAAAATTATCGCCTATGTTCACACCCCTCTTTCTTTGAATCAGGCTAGTAAAGAATGCCCGCCAAGTTCAGATAAGGAAATGCTTCCCCCAACCATTAAAGGCTCGACGAAGGGAGGGGAAGGAAAATGCTTTCGGAGATCGATATTGGATTTCTTTTGAATCAAAAACGAAAAAGGCCGAGGATGGCCTACAGTGCGTCTTATCTGAAGGGAACACGCCTTTTCGAAAGCGGTGGTATGATTGCCGGGCCCTCTCCTCGTTCTGCCCGCTGGCCTATTAGGTAGGATAGCAGTCTTCGGGCTTTGCCTGCCCTTTCTCATCAAGAATTTCGGCTTGGCCCGGGAAAGCGCTGGCAACAAAAGGAAGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGGTTCGGCATCCACTAGAAAAGAGAGAATCCACTTAGATAACCATGCCTCTGCTAGGCGGCAGCGTGTGGAATAGCCGAGAGCAGACCTTTTTGGATATATAATCCAAGTCGAGAGTGGAGTTACGGAAAGAGCCGTCTGATGGAAAACAACTTTCACGTTCGGTTCAGAGAGCACTGTTTTCGTTGATCATTCCTCGTTCCCTTTCGTGTGAATTCCACAGCGGCGAATTCTCAACTTGTGGGGCCCTATCTATTCCATCTCTCAAGCCCCAAAGAAAAACCCCCTACCCTTCGGACTCCATATCTCTTTTGACTCTATATATGTGGGCACCTGATATCTATGAGGGTTCACCCACCCCGGTTACACCATTCCTTTCTATTGCGCCTAAAATCTCTATTTTTGCTAATATTTCACGTCTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTTCTTTTTCTGTAGCATTGCTTCTATGATCTTAGGAGCACTGGCCGCCATGGCCCAAACGAAAGTCAAAAGACCTCTAGCTCATAGTTCAATTGGACATGTAGGTTATATTCGTACTGGTTTCTCATGTGGAACCATAGAAGGAATTCAATCACTACTAATTGGTATCTTGATTTATGTATTAATGACAATAGATGCATTCGCTATAGTTTTAGCATTACGGCAACCTCGTGTAAAATATATAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTATTTCGGTTGTTACCTTCTCCATTACTATGTTCTCATACGCAGGAATACCCCCGTTAGCCGGTTTTTGTAGCAAATTCTATTTGTTTTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAGTAAGTCAGTCCGTTTGGGAGACCGAAGACAGTTCTCCGTGCACCGGACACGTAGCTTACCGAATCCGTTGCGACACGGATGGGAATGCATGCTTCGAAAGATAG

mRNA sequence

ATGATCTATGGGTCTACTGGAGCTACCCACTTCGATCAATTAGCCAATATTTTGACCGGATACGAAATCACTGGTGCTCGATCTAGTGGTATTTTTATGGGGATTCTATCTATCGCTGATAGCAGTCTTCGGGCTTTGCCTGCCCTTTCTCATCAAGAATTTCGGCTTGGCCCGGGAAAGCGCTGGCAACAAAAGGAAGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGGTTCGGCATCCACTAGAAAAGAGAGAATCCACTTAGATAACCATGCCTCTGCTAGGCGGCAGCGTTCGAGAGTGGAGTTACGGAAAGAGCCGTCTGATGGAAAACAACTTTCACGTTCGGTTCAGAGAGCACTGTTTTCGTTGATCATTCCTCGTTCCCTTTCGTGTGAATTCCACAGCGGCGAATTCTCAACTTGTGGGGCCCTATCTATTCCATCTCTCAAGCCCCAAAGAAAAACCCCCTACCCTTCGGACTCCATATCTCTTTTGACTCTATATATGTGGGCACCTGATATCTATGAGGGTTCACCCACCCCGGTTACACCATTCCTTTCTATTGCGCCTAAAATCTCTATTTTTGCTAATATTTCACGTCTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTTCTTTTTCTGTAGCATTGCTTCTATGATCTTAGGAGCACTGGCCGCCATGGCCCAAACGAAAGTCAAAAGACCTCTAGCTCATAGTTCAATTGGACATGTAGGTTATATTCGTACTGGTTTCTCATGTGGAACCATAGAAGGAATTCAATCACTACTAATTGGTATCTTGATTTATGTATTAATGACAATAGATGCATTCGCTATAGTTTTAGCATTACGGCAACCTCGTGTAAAATATATAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTATTTCGGTTGTTACCTTCTCCATTACTATGTTCTCATACGCAGGAATACCCCCGTTAGCCGGTTTTTGTAGCAAATTCTATTTGTTTTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAGTAAGTCAGTCCGTTTGGGAGACCGAAGACAGTTCTCCGTGCACCGGACACGTAGCTTACCGAATCCGTTGCGACACGGATGGGAATGCATGCTTCGAAAGATAG

Coding sequence (CDS)

ATGATCTATGGGTCTACTGGAGCTACCCACTTCGATCAATTAGCCAATATTTTGACCGGATACGAAATCACTGGTGCTCGATCTAGTGGTATTTTTATGGGGATTCTATCTATCGCTGATAGCAGTCTTCGGGCTTTGCCTGCCCTTTCTCATCAAGAATTTCGGCTTGGCCCGGGAAAGCGCTGGCAACAAAAGGAAGGGGTCCATGTAGCTGCTGCGCCCGCCCCCTTCTTAGTCAATGGGGCAGCAGGTTCGGCATCCACTAGAAAAGAGAGAATCCACTTAGATAACCATGCCTCTGCTAGGCGGCAGCGTTCGAGAGTGGAGTTACGGAAAGAGCCGTCTGATGGAAAACAACTTTCACGTTCGGTTCAGAGAGCACTGTTTTCGTTGATCATTCCTCGTTCCCTTTCGTGTGAATTCCACAGCGGCGAATTCTCAACTTGTGGGGCCCTATCTATTCCATCTCTCAAGCCCCAAAGAAAAACCCCCTACCCTTCGGACTCCATATCTCTTTTGACTCTATATATGTGGGCACCTGATATCTATGAGGGTTCACCCACCCCGGTTACACCATTCCTTTCTATTGCGCCTAAAATCTCTATTTTTGCTAATATTTCACGTCTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTTCTTTTTCTGTAGCATTGCTTCTATGATCTTAGGAGCACTGGCCGCCATGGCCCAAACGAAAGTCAAAAGACCTCTAGCTCATAGTTCAATTGGACATGTAGGTTATATTCGTACTGGTTTCTCATGTGGAACCATAGAAGGAATTCAATCACTACTAATTGGTATCTTGATTTATGTATTAATGACAATAGATGCATTCGCTATAGTTTTAGCATTACGGCAACCTCGTGTAAAATATATAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTATTTCGGTTGTTACCTTCTCCATTACTATGTTCTCATACGCAGGAATACCCCCGTTAGCCGGTTTTTGTAGCAAATTCTATTTGTTTTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAGTAAGTCAGTCCGTTTGGGAGACCGAAGACAGTTCTCCGTGCACCGGACACGTAGCTTACCGAATCCGTTGCGACACGGATGGGAATGCATGCTTCGAAAGATAG

Protein sequence

MIYGSTGATHFDQLANILTGYEITGARSSGIFMGILSIADSSLRALPALSHQEFRLGPGKRWQQKEGVHVAAAPAPFLVNGAAGSASTRKERIHLDNHASARRQRSRVELRKEPSDGKQLSRSVQRALFSLIIPRSLSCEFHSGEFSTCGALSIPSLKPQRKTPYPSDSISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRVSQSVWETEDSSPCTGHVAYRIRCDTDGNACFER
Homology
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BLAST of CmaCh12G006700 vs. Swiss-Prot
Match: NU2M_ARATH (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana GN=ND2 PE=2 SV=2)

HSP 1 Score: 329.3 bits (843), Expect = 5.8e-89
Identity = 174/196 (88.78%), Postives = 181/196 (92.35%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIA 229
           I+ +  +MWAPDIYEGSPTPVT FLSIAPKISIFANI R+ IYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 300

Query: 230 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAF 289
           SMILGALAAMAQTKVKR LA+SSIGHVGYI  GFSCGTIEGIQSLLIGI IY LMT+DAF
Sbjct: 301 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAF 360

Query: 290 AIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 349
           AIVLALRQ RVKYIADLGALAKTNPI  +TFSITMFSYAGIPPLAGFCSKFYLFFAALGC
Sbjct: 361 AIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGC 420

Query: 350 GAYFLAPVGVVTSVIG 366
           GAYFLA VGVVTSVIG
Sbjct: 421 GAYFLALVGVVTSVIG 436

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BLAST of CmaCh12G006700 vs. Swiss-Prot
Match: NU2M_OENBE (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana GN=ND2 PE=2 SV=2)

HSP 1 Score: 326.2 bits (835), Expect = 4.9e-88
Identity = 172/196 (87.76%), Postives = 180/196 (91.84%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIA 229
           I+ +  +MWAPDIYEGSPTPVT FLSIAPKISIFANI R+ IYGSYGATLQQIFFFCSIA
Sbjct: 230 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIA 289

Query: 230 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAF 289
           SMILGALAAMAQTKVKR LA+SSIGHVGYI  GFSCGTIEGIQSLLIG+ IY L TI+AF
Sbjct: 290 SMILGALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGLFIYALTTINAF 349

Query: 290 AIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 349
           AIVLALRQ RVKYIADLGALAKTNPI  +TFSITMFSYAGIPPLAGFCSKFYLFFAALGC
Sbjct: 350 AIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAGIPPLAGFCSKFYLFFAALGC 409

Query: 350 GAYFLAPVGVVTSVIG 366
           GAYFLA VGVVTSVIG
Sbjct: 410 GAYFLASVGVVTSVIG 425

[Close]
BLAST of CmaCh12G006700 vs. Swiss-Prot
Match: NU2M_BETVU (NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris GN=ND2 PE=3 SV=2)

HSP 1 Score: 313.5 bits (802), Expect = 3.3e-84
Identity = 208/332 (62.65%), Postives = 223/332 (67.17%), Query Frame = 1 

Query: 64  QKEGVHVAAAPAPFLVNGAAGSASTRKERIHLD-NHASARRQRS-----------RVELR 123
           +KEGVHVAAA APFLVN AAGSA+T KERIH    +ASA                +VE  
Sbjct: 92  RKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESG 151

Query: 124 KEPSDG---KQLSRSVQRALFSLIIPRSLSCEFHSGEFSTCGALSIPSLKPQRKTPYPSD 183
              + G        SVQRALFSL I RSL     +   +  G  SIPS  P  KTP P  
Sbjct: 152 VTGTAGLMENNFHGSVQRALFSLRILRSLRVNSLARIQNFWGP-SIPSSSPA-KTPLPFG 211

Query: 184 SISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSI 243
                  YMWAPDIYEGSPTPVT F SIAP+ SI ANI R+ IYGSYGATLQQIFFFCSI
Sbjct: 212 LNIFFDSYMWAPDIYEGSPTPVTAFFSIAPERSISANILRVFIYGSYGATLQQIFFFCSI 271

Query: 244 ASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTI---EGIQSLLIGILIYVLMT 303
           A + L +  AMA        A SSIG + Y    F    +   EGIQSLLIG+ IY  M 
Sbjct: 272 A-LRLRSTGAMAN----EGKASSSIGQLDYGGLYFVLVLMWNREGIQSLLIGLFIYASMD 331

Query: 304 IDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFA 363
              FAIV ALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFYLFFA
Sbjct: 332 DRCFAIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFA 391

Query: 364 ALGCGAYFLAPVGVVTSVIGRWAAGRLPRVSQ 378
           ALGCGAYFLAPVGVVTSVIG WAAGRLPRVSQ
Sbjct: 392 ALGCGAYFLAPVGVVTSVIGCWAAGRLPRVSQ 416

[Close]
BLAST of CmaCh12G006700 vs. Swiss-Prot
Match: NU2M_MARPO (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha GN=ND2 PE=3 SV=2)

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-78
Identity = 155/195 (79.49%), Postives = 168/195 (86.15%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIA 229
           I+ +  +MWAPD+YEGSPT VT F SIAPKISI AN+ R+ IY  Y  T QQ+FFFCSIA
Sbjct: 231 ITAVPFHMWAPDVYEGSPTIVTAFFSIAPKISILANMLRVFIYSFYDPTWQQLFFFCSIA 290

Query: 230 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAF 289
           SMILGALAAMAQ KVKR LA+SSIGHVGY+  GFSCGTIEGIQSLLIGI IYVLMT++ F
Sbjct: 291 SMILGALAAMAQNKVKRLLAYSSIGHVGYLLIGFSCGTIEGIQSLLIGIFIYVLMTVNVF 350

Query: 290 AIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 349
           AIVLALRQ R KYIADLGALAKTNPI  +T SITMFSYAGIPPLAGFCSKFYLFFAALGC
Sbjct: 351 AIVLALRQNRFKYIADLGALAKTNPILAITLSITMFSYAGIPPLAGFCSKFYLFFAALGC 410

Query: 350 GAYFLAPVGVVTSVI 365
           GAY LA +GVVTSVI
Sbjct: 411 GAYLLALIGVVTSVI 425

[Close]
BLAST of CmaCh12G006700 vs. Swiss-Prot
Match: NUON_RHORT (NADH-quinone oxidoreductase subunit N OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) GN=nuoN PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 89/199 (44.72%), Postives = 133/199 (66.83%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSI--YGSYGATLQQIFFFCS 229
           +S +  +MWAPD+YEG+PTPVT F ++APKI+     +R+ +  + +Y    QQ+    S
Sbjct: 222 VSAVPFHMWAPDVYEGAPTPVTAFFAVAPKIAALTLFARVMMGPFAAYADQWQQVIILIS 281

Query: 230 IASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTID 289
           I SM+LG  AA+ QT +KR +A+SSIGHVGY   G + GT EG++ +L+ + IY+ M + 
Sbjct: 282 ILSMLLGGFAAIVQTNIKRLMAYSSIGHVGYALIGIAAGTTEGVRGVLVYLAIYLFMNVG 341

Query: 290 AFAIVLALRQP--RVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFA 349
            F ++LA+RQ    V+ I DL  L+K +P+     ++ MFS AG+PPLAGF  KFY+F A
Sbjct: 342 TFTVILAMRQKGRAVEGINDLAGLSKQHPMMAAAMAVFMFSMAGVPPLAGFFGKFYVFMA 401

Query: 350 ALGCGAYFLAPVGVVTSVI 365
           A+  G + LA +GV++SV+
Sbjct: 402 AVNSGLFALAVIGVLSSVV 420

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BLAST of CmaCh12G006700 vs. TrEMBL
Match: K7L456_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 9.0e-121
Identity = 257/360 (71.39%), Postives = 277/360 (76.94%), Query Frame = 1 

Query: 1   MIYGSTGATHFDQLANILTGYEITGARSSGIFMGILSIADSSLRALPALSHQEFRLGPGK 60
           MIYGSTGATHFDQLA ILTGYEITGARSSGIFMGILSIA  SL  + A +  E R GP  
Sbjct: 1   MIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILSIAVGSLFKITAKNRLEVR-GPLV 60

Query: 61  RWQQKEGVHVAAAPAPFLVNGAAGSASTRKER---IHLDNHASARRQRSRVELRKEPSDG 120
            +   E       PA F  +  A   S  +     + +++  + ++  S          G
Sbjct: 61  PYPTPE-------PAAFAPSKTALVLSPFRLLLCFVPIESSKAKQKWPSGFACPFFLGPG 120

Query: 121 KQLSRSVQRALFSLIIPRSLSCEFHSGEFSTCGALSIPSLKPQRKTPYPSDSISLLTLYM 180
           K+  +   R   S  +   LS    SGEF T  ALSIPSL+P+RK P PSDSISLLTLYM
Sbjct: 121 KRWQQQKGRGPCSCCVRPLLSQWGSSGEFKTFLALSIPSLEPRRKPPSPSDSISLLTLYM 180

Query: 181 WAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIASMILGALA 240
           WAPDIYEGSPTPVT FLSIAPKISIFANISR+SIYGSYGATLQQIF FCSIASMILGALA
Sbjct: 181 WAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFCFCSIASMILGALA 240

Query: 241 AMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALRQ 300
           AMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIY LMTIDAFAIVLALRQ
Sbjct: 241 AMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYALMTIDAFAIVLALRQ 300

Query: 301 PRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPV 358
            RVKYIADLGALAKTNPIS +TFSITMFSY GIPPLAGFCSKFYLFFAALGCGAYFLAP+
Sbjct: 301 TRVKYIADLGALAKTNPISAITFSITMFSYVGIPPLAGFCSKFYLFFAALGCGAYFLAPL 352

[Close]
BLAST of CmaCh12G006700 vs. TrEMBL
Match: B9T991_RICCO (NADH dehydrogenase, putative (Fragment) OS=Ricinus communis GN=RCOM_2033430 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.8e-105
Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 1 

Query: 162 KTPYPSDSISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQ 221
           K P PSDSISLLTLYMWAPDIYEGSPTPVT FLSIAPKISI ANISR+SIYGSYGATLQQ
Sbjct: 1   KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQ 60

Query: 222 IFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIY 281
           IFFFCSIASMILG+LAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIG+ IY
Sbjct: 61  IFFFCSIASMILGSLAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIY 120

Query: 282 VLMTIDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFY 341
            LMTIDAFAIVLALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFY
Sbjct: 121 ALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFY 180

Query: 342 LFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 376
           LFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV
Sbjct: 181 LFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 214

[Close]
BLAST of CmaCh12G006700 vs. TrEMBL
Match: A0A0D2NAB2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G164600 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.4e-105
Identity = 203/215 (94.42%), Postives = 206/215 (95.81%), Query Frame = 1 

Query: 161 RKTPYPSDSISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQ 220
           RKTP PSDSISLLTLYMWAPDIYEGSPTPVT FLSIAPKISI ANISR+SIYGSYGATLQ
Sbjct: 79  RKTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQ 138

Query: 221 QIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILI 280
           QIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI I
Sbjct: 139 QIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFI 198

Query: 281 YVLMTIDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKF 340
           Y LMTIDAFAIV ALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKF
Sbjct: 199 YALMTIDAFAIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKF 258

Query: 341 YLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 376
           YLFFAALGCGAYFLAPVGVVTSVIG WAAGRLPR+
Sbjct: 259 YLFFAALGCGAYFLAPVGVVTSVIGCWAAGRLPRM 293

[Close]
BLAST of CmaCh12G006700 vs. TrEMBL
Match: F6H891_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0505g00030 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 9.0e-105
Identity = 201/221 (90.95%), Postives = 208/221 (94.12%), Query Frame = 1 

Query: 159 PQRKTPYPSDSISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGAT 218
           P+RK P PSDSISLLTLYMWAPDIYEGSPTPVT FL IAPKISI ANISR+SIYGSYGAT
Sbjct: 245 PRRKAPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLFIAPKISISANISRVSIYGSYGAT 304

Query: 219 LQQIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI 278
           LQQIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTG SCGTIEGIQSLLIGI
Sbjct: 305 LQQIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGLSCGTIEGIQSLLIGI 364

Query: 279 LIYVLMTIDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCS 338
            IY  MTIDAFAIVLAL+Q  VKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCS
Sbjct: 365 FIYASMTIDAFAIVLALQQTCVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCS 424

Query: 339 KFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRVSQSV 380
           KFYLFFAALGCGAYFLAPVGVVTSVIGRWA GRLPR+++SV
Sbjct: 425 KFYLFFAALGCGAYFLAPVGVVTSVIGRWAVGRLPRLTESV 465

[Close]
BLAST of CmaCh12G006700 vs. TrEMBL
Match: R4ITZ4_VICFA (Uncharacterized protein OS=Vicia faba PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.7e-98
Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 1 

Query: 177 MWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIASMILGAL 236
           MWAPDIYEGSPTPVT FLSIAPKISIFANISR+SIYGSYGATLQQIF FCSIASMILGAL
Sbjct: 1   MWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFCFCSIASMILGAL 60

Query: 237 AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALR 296
           AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI IY LMTIDAFAIVLALR
Sbjct: 61  AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALR 120

Query: 297 QPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP 356
           Q RVKYIADLGALAKTNPIS +TFSITMFSY GIPPLAGFCSKFYLFFAALGCGAYFLAP
Sbjct: 121 QTRVKYIADLGALAKTNPISAITFSITMFSYVGIPPLAGFCSKFYLFFAALGCGAYFLAP 180

Query: 357 VGVVTSVIGRWAAGRLPRVSQ 378
           VGVVTSVIG WAAGRLPRVSQ
Sbjct: 181 VGVVTSVIGCWAAGRLPRVSQ 201

[Close]
BLAST of CmaCh12G006700 vs. TAIR10
Match: AT2G07689.1 (AT2G07689.1 NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 364.8 bits (935), Expect = 7.1e-101
Identity = 188/201 (93.53%), Postives = 193/201 (96.02%), Query Frame = 1 

Query: 177 MWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIASMILGAL 236
           MWAPDIYEGSPTPVT FLSIAPKISI ANI R+SIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 1   MWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIASMILGAL 60

Query: 237 AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALR 296
           AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI IY LMT+DAFAIV ALR
Sbjct: 61  AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALR 120

Query: 297 QPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP 356
           Q RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP
Sbjct: 121 QTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP 180

Query: 357 VGVVTSVIGRWAAGRLPRVSQ 378
           VGVVTSVIGRWAAGRLPR+S+
Sbjct: 181 VGVVTSVIGRWAAGRLPRISK 201

[Close]
BLAST of CmaCh12G006700 vs. TAIR10
Match: ATMG00285.1 (ATMG00285.1 NADH dehydrogenase 2A)

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIA 229
           I+ +  +MWAPDIYEGSPTPVT FLSIAPKISI ANI R+SIYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIA 300

Query: 230 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAF 289
           SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI IY LMT+DAF
Sbjct: 301 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAF 360

Query: 290 AIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 349
           AIV ALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFYLFFAALGC
Sbjct: 361 AIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGC 420

Query: 350 GAYFLAPVGVVTSVIGRWAAGRL 373
           GAYFLAPVGVVTSVIGR+   RL
Sbjct: 421 GAYFLAPVGVVTSVIGRFYYIRL 443

[Close]
BLAST of CmaCh12G006700 vs. TAIR10
Match: ATMG01320.1 (ATMG01320.1 NADH dehydrogenase 2B)

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-95
Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIA 229
           I+ +  +MWAPDIYEGSPTPVT FLSIAPKISI ANI R+SIYGSYGATLQQIFFFCSIA
Sbjct: 241 ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIA 300

Query: 230 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAF 289
           SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI IY LMT+DAF
Sbjct: 301 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAF 360

Query: 290 AIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 349
           AIV ALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFYLFFAALGC
Sbjct: 361 AIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGC 420

Query: 350 GAYFLAPVGVVTSVIGRWAAGRL 373
           GAYFLAPVGVVTSVIGR+   RL
Sbjct: 421 GAYFLAPVGVVTSVIGRFYYIRL 443

[Close]
BLAST of CmaCh12G006700 vs. TAIR10
Match: ATCG00890.1 (ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-27
Identity = 73/199 (36.68%), Postives = 112/199 (56.28%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQ--QIFFFCS 229
           +SL   + W PD+YEGSPTPV  FLS+  K++  A+ +R+     Y ++ +   +    +
Sbjct: 121 LSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 180

Query: 230 IASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGILIYVLMTI 289
           I SMI G L A+ QT +KR LA+SSIG +GY+  G   G    G  S++  +L Y+ M +
Sbjct: 181 ILSMIFGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNL 240

Query: 290 DAFA-IVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFA 349
             FA I+L   +     I D   L   +P   ++ ++ + S  G+PPLAGF  K +LF+ 
Sbjct: 241 GTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWC 300

Query: 350 ALGCGAYFLAPVGVVTSVI 365
               G YFL  +G++TSV+
Sbjct: 301 GWQAGLYFLVSIGLLTSVL 319

[Close]
BLAST of CmaCh12G006700 vs. TAIR10
Match: ATCG01250.1 (ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-27
Identity = 73/199 (36.68%), Postives = 112/199 (56.28%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQ--QIFFFCS 229
           +SL   + W PD+YEGSPTPV  FLS+  K++  A+ +R+     Y ++ +   +    +
Sbjct: 121 LSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASASATRIFDIPFYFSSNEWHLLLEILA 180

Query: 230 IASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIE-GIQSLLIGILIYVLMTI 289
           I SMI G L A+ QT +KR LA+SSIG +GY+  G   G    G  S++  +L Y+ M +
Sbjct: 181 ILSMIFGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNL 240

Query: 290 DAFA-IVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFA 349
             FA I+L   +     I D   L   +P   ++ ++ + S  G+PPLAGF  K +LF+ 
Sbjct: 241 GTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWC 300

Query: 350 ALGCGAYFLAPVGVVTSVI 365
               G YFL  +G++TSV+
Sbjct: 301 GWQAGLYFLVSIGLLTSVL 319

[Close]
BLAST of CmaCh12G006700 vs. NCBI nr
Match: gi|223524538|gb|EEF27573.1| (NADH dehydrogenase, putative, partial [Ricinus communis])

HSP 1 Score: 391.0 bits (1003), Expect = 2.6e-105
Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 1 

Query: 162 KTPYPSDSISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQ 221
           K P PSDSISLLTLYMWAPDIYEGSPTPVT FLSIAPKISI ANISR+SIYGSYGATLQQ
Sbjct: 1   KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQ 60

Query: 222 IFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIY 281
           IFFFCSIASMILG+LAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIG+ IY
Sbjct: 61  IFFFCSIASMILGSLAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGLFIY 120

Query: 282 VLMTIDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFY 341
            LMTIDAFAIVLALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFY
Sbjct: 121 ALMTIDAFAIVLALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFY 180

Query: 342 LFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 376
           LFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV
Sbjct: 181 LFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 214

[Close]
BLAST of CmaCh12G006700 vs. NCBI nr
Match: gi|763742279|gb|KJB09778.1| (hypothetical protein B456_001G164600 [Gossypium raimondii])

HSP 1 Score: 390.6 bits (1002), Expect = 3.4e-105
Identity = 203/215 (94.42%), Postives = 206/215 (95.81%), Query Frame = 1 

Query: 161 RKTPYPSDSISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQ 220
           RKTP PSDSISLLTLYMWAPDIYEGSPTPVT FLSIAPKISI ANISR+SIYGSYGATLQ
Sbjct: 79  RKTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQ 138

Query: 221 QIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILI 280
           QIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI I
Sbjct: 139 QIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFI 198

Query: 281 YVLMTIDAFAIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKF 340
           Y LMTIDAFAIV ALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKF
Sbjct: 199 YALMTIDAFAIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKF 258

Query: 341 YLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRV 376
           YLFFAALGCGAYFLAPVGVVTSVIG WAAGRLPR+
Sbjct: 259 YLFFAALGCGAYFLAPVGVVTSVIGCWAAGRLPRM 293

[Close]
BLAST of CmaCh12G006700 vs. NCBI nr
Match: gi|743900117|ref|XP_011043349.1| (PREDICTED: NADH-ubiquinone oxidoreductase chain 2 [Populus euphratica])

HSP 1 Score: 372.5 bits (955), Expect = 9.6e-100
Identity = 193/208 (92.79%), Postives = 198/208 (95.19%), Query Frame = 1 

Query: 170 ISLLTLYMWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIA 229
           I+ +  +MWAPDIYEGSPTPVT FLSIAPKISI ANISR+SIYGSYGATLQQIFFFCSIA
Sbjct: 44  ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQIFFFCSIA 103

Query: 230 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAF 289
           SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI IY LMTIDAF
Sbjct: 104 SMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAF 163

Query: 290 AIVLALRQPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGC 349
           AIV ALRQ RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFYLFFAALGC
Sbjct: 164 AIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGC 223

Query: 350 GAYFLAPVGVVTSVIGRWAAGRLPRVSQ 378
           GAYFLAPVGVVTSVIGRWAAGRLPRVSQ
Sbjct: 224 GAYFLAPVGVVTSVIGRWAAGRLPRVSQ 251

[Close]
BLAST of CmaCh12G006700 vs. NCBI nr
Match: gi|442803245|gb|AGC78980.1| (hypothetical protein (mitochondrion) [Vicia faba])

HSP 1 Score: 367.9 bits (943), Expect = 2.4e-98
Identity = 191/201 (95.02%), Postives = 193/201 (96.02%), Query Frame = 1 

Query: 177 MWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIASMILGAL 236
           MWAPDIYEGSPTPVT FLSIAPKISIFANISR+SIYGSYGATLQQIF FCSIASMILGAL
Sbjct: 1   MWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQIFCFCSIASMILGAL 60

Query: 237 AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALR 296
           AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGI IY LMTIDAFAIVLALR
Sbjct: 61  AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTIDAFAIVLALR 120

Query: 297 QPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP 356
           Q RVKYIADLGALAKTNPIS +TFSITMFSY GIPPLAGFCSKFYLFFAALGCGAYFLAP
Sbjct: 121 QTRVKYIADLGALAKTNPISAITFSITMFSYVGIPPLAGFCSKFYLFFAALGCGAYFLAP 180

Query: 357 VGVVTSVIGRWAAGRLPRVSQ 378
           VGVVTSVIG WAAGRLPRVSQ
Sbjct: 181 VGVVTSVIGCWAAGRLPRVSQ 201

[Close]
BLAST of CmaCh12G006700 vs. NCBI nr
Match: gi|147841236|emb|CAN64512.1| (hypothetical protein VITISV_004351 [Vitis vinifera])

HSP 1 Score: 367.5 bits (942), Expect = 3.1e-98
Identity = 190/203 (93.60%), Postives = 195/203 (96.06%), Query Frame = 1 

Query: 177 MWAPDIYEGSPTPVTPFLSIAPKISIFANISRLSIYGSYGATLQQIFFFCSIASMILGAL 236
           MWAPDIYEGSPTPVT FLSIAPKISI ANISR+SIYGSYGATLQQIFFFCSIASMILGAL
Sbjct: 1   MWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQIFFFCSIASMILGAL 60

Query: 237 AAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGILIYVLMTIDAFAIVLALR 296
           AAMAQTKVKRPLAHSSIGHVGYIRTG SCGTIEGIQSLLIGI IY  MTIDAFAIVLALR
Sbjct: 61  AAMAQTKVKRPLAHSSIGHVGYIRTGLSCGTIEGIQSLLIGIFIYASMTIDAFAIVLALR 120

Query: 297 QPRVKYIADLGALAKTNPISVVTFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP 356
           Q RVKYIADLGALAKTNPIS +TFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP
Sbjct: 121 QTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAP 180

Query: 357 VGVVTSVIGRWAAGRLPRVSQSV 380
           VGVVTSVIGRWAAGRLPR+++SV
Sbjct: 181 VGVVTSVIGRWAAGRLPRLTESV 203

The following BLAST results are available for this feature:
BLAST of CmaCh12G006700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NU2M_ARATH5.8e-8988.78NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana GN=ND2 PE=2 SV=2[more]
NU2M_OENBE4.9e-8887.76NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana GN=ND2 PE=2 SV=2[more]
NU2M_BETVU3.3e-8462.65NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris GN=ND2 PE=3 SV=2[more]
NU2M_MARPO1.2e-7879.49NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha GN=ND2 PE=3 SV=2[more]
NUON_RHORT1.1e-4244.72NADH-quinone oxidoreductase subunit N OS=Rhodospirillum rubrum (strain ATCC 1117... [more]
BLAST of CmaCh12G006700 vs. TrEMBL
Match NameE-valueIdentityDescription
K7L456_SOYBN9.0e-12171.39Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9T991_RICCO1.8e-10594.39NADH dehydrogenase, putative (Fragment) OS=Ricinus communis GN=RCOM_2033430 PE=4... [more]
A0A0D2NAB2_GOSRA2.4e-10594.42Uncharacterized protein OS=Gossypium raimondii GN=B456_001G164600 PE=4 SV=1[more]
F6H891_VITVI9.0e-10590.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0505g00030 PE=4 SV=... [more]
R4ITZ4_VICFA1.7e-9895.02Uncharacterized protein OS=Vicia faba PE=4 SV=1[more]
BLAST of CmaCh12G006700 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07689.17.1e-10193.53 NADH-Ubiquinone/plastoquinone (complex I) protein[more]
ATMG00285.11.5e-9589.66ATMG00285.1 NADH dehydrogenase 2A[more]
ATMG01320.11.5e-9589.66ATMG01320.1 NADH dehydrogenase 2B[more]
ATCG00890.15.2e-2736.68ATCG00890.1 NADH-Ubiquinone/plastoquinone (complex I) protein[more]
ATCG01250.15.2e-2736.68ATCG01250.1 NADH-Ubiquinone/plastoquinone (complex I) protein[more]
BLAST of CmaCh12G006700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|223524538|gb|EEF27573.1|2.6e-10594.39NADH dehydrogenase, putative, partial [Ricinus communis][more]
gi|763742279|gb|KJB09778.1|3.4e-10594.42hypothetical protein B456_001G164600 [Gossypium raimondii][more]
gi|743900117|ref|XP_011043349.1|9.6e-10092.79PREDICTED: NADH-ubiquinone oxidoreductase chain 2 [Populus euphratica][more]
gi|442803245|gb|AGC78980.1|2.4e-9895.02hypothetical protein (mitochondrion) [Vicia faba][more]
gi|147841236|emb|CAN64512.1|3.1e-9893.60hypothetical protein VITISV_004351 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001750ND/Mrp_mem
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G006700.1CmaCh12G006700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 171..365
score: 2.8
NoneNo IPR availablePANTHERPTHR22773NADH DEHYDROGENASEcoord: 170..378
score: 4.0E
NoneNo IPR availablePANTHERPTHR22773:SF89NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 2-RELATEDcoord: 170..378
score: 4.0E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G006700Cucurbita pepo (Zucchini)cmacpeB181
CmaCh12G006700Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G006700Bottle gourd (USVL1VR-Ls)cmalsiB190
CmaCh12G006700Cucumber (Gy14) v2cgybcmaB480
CmaCh12G006700Cucumber (Gy14) v2cgybcmaB718
CmaCh12G006700Melon (DHL92) v3.6.1cmamedB179
CmaCh12G006700Melon (DHL92) v3.6.1cmamedB199
CmaCh12G006700Silver-seed gourdcarcmaB0172
CmaCh12G006700Silver-seed gourdcarcmaB0289
CmaCh12G006700Silver-seed gourdcarcmaB0502
CmaCh12G006700Cucumber (Chinese Long) v3cmacucB0224
CmaCh12G006700Watermelon (97103) v2cmawmbB200
CmaCh12G006700Wax gourdcmawgoB0205
CmaCh12G006700Cucurbita maxima (Rimu)cmacmaB181
CmaCh12G006700Cucurbita maxima (Rimu)cmacmaB201
CmaCh12G006700Cucumber (Gy14) v1cgycmaB0129
CmaCh12G006700Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G006700Cucurbita moschata (Rifu)cmacmoB201
CmaCh12G006700Wild cucumber (PI 183967)cmacpiB188
CmaCh12G006700Wild cucumber (PI 183967)cmacpiB198
CmaCh12G006700Cucumber (Chinese Long) v2cmacuB195
CmaCh12G006700Melon (DHL92) v3.5.1cmameB164
CmaCh12G006700Melon (DHL92) v3.5.1cmameB183
CmaCh12G006700Watermelon (Charleston Gray)cmawcgB175
CmaCh12G006700Watermelon (97103) v1cmawmB153