CmaCh12G006690 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh12G006690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	ATP synthase subunit a
Location	Cma_Chr12 : 3594747 .. 3597072 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTACATTAAATCAATTGATTCGTCGTCATGGTAGAGAAGAAAAACGGCGCACGAATCGTACTCGAGCTTCGGATCAATGTCCCCAAAAGCAAGGAGTACGCCCCCGTCTTTCAACGAGAACACCGAAAAAACCTAATTCAGCTCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTCCGGGCGAAGGTCATAATTTGCAGGAACATTCTATGGTCTTAATAAGAGGAGGTAGAGTGAAAGATTCGCCAGGTGTGAAATCCCATTGTATTCGAGGAGTCAAGGATTTGCTGGGAATTCAGGATCGAAGAAGAGGAAGATCTAAATATGGTGCAGAAAAACCTAAATCGATATGAATGGAAGATGCCTCTTTCACTTCTTTTTCTCGGTCAGTCGAGGGAAAGGGAACAACCAACCACAATGTTACGCCCCAAAATCGAACTATACGGAGCCCTTCCGAATGACCTCTCATGGAGTCTGCTACACTAGCCAAGAAAGAGTGTATTAGACTCTATTCGCCCGTGGAGGTGAGTGGAGGAAGAATCAAAAAAGAGAAAGGTATTGCTACTAAGAAATAGTTGCTCGTTCATAAATGAAGTTGACCACTTCTTCTTAGTCTTGCTACACTACACGACACGAGGGGTGAAGTTGAAGCAGACACGGTCTTCAGTCGACTGAACAAGTGATGAACCATATGGAAATAAGAAAAAAAGGAGAGAAGGGTCTCGCCCAGGTGGCTCCTGCAAGGTAAGGTAACGACTTCAAACTCAAACAAAGAACGTTCTTCTCCAAGGCGCATGAGTCAAAGAAAATGTTGTATCTATCTAATGCAAGACCCGTCGATAAGCTAAGGCTACGAGCGGATCATTAGGTCTGCCCGGTTGGGCTCAACCTCAGAGAATTGAGTGAACAGGAAAGGGAGGACGCCGGCTAATCTCTTCCAAGGAGTATCGGGGGGTGGAACGGCAAATGAACCTTTTTGAGGCTCGGGCCGAAGAGCTAAAGCAAAAGGCCGTCGAGCTCGTTCATTCTCGTTCCATTCTAGTGGATGAAGAGTCAGATGTGGGGCTGGCAATCAATCTTCTCTTGGAGAAGAAGAGAGAGAGGCGACCTCAGATTCCTCCCCAGGGCGATGAAGGTGATTGAGAATGGCAAAAGCCGCTTTTAGAAAGCCTTCCTCCCTCCTTGAACTCAAAGGATTAAACCCGAACGCTACCTGCGGACGATTCCACAGCGTAGAGCTTCAATCAATAGGCCATTTCCGTCGGATTTTCTCCTCAGCAATGCCCACTCCCATGCCTTTCTTGGTTGGACCAACCCAACCGGCTATTTCCGACAAGTCTTTCTTCATTTTTAGAGCAAGAAGCGGAACTACAGGGATGAAATGAAAAGTGTTTCTTACGATTACGCCCAACAGCCCACTTGAGCAATTTGCCATTCTCCCATTGATTCCTATGAATATAAAAAACTTTTATTTCTCATTCACAAATCCCTCTTTCTTTATGCTGCTAACTCTCAGTTTGGTCCTACTTCTCGTTTATTTTGTTACTAAAAACGGAGGAGGAAACTCAGTACCAAATGCTTGGCAATCCTTGGTAGAGCTTATTTATGATTTCGTGCCGAACCTGGTAAACGAACAAATAGGTGGTCTTTCCGGATCCGAAAATGTGAAACAAAAGTTTTTCCCTCGCATCTCGGTCACTTTGACTTTTTCGTTATTTCGTAATCCCCAGGGTATGTTACCTTATAGCTTCACAGTTACAAGTCATTTTCTCATTACTTTGGGTCTCTCATTTTCTCTTTTTATTGGTATTACTATAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCGTTGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGAGCTAATCCCTCATTGTTTTCGCGCATTAAGCTCAGGAATACGGTTATTTGCTAATATGATGGCCGGTCATAGTTCAGTAAAGATTTTAAGTGGGTCCGCTTGGACTATGCTATGTATGAATAATATTTTCTATTTCATAGGAGATCCTAGTCCTTTATTTATAGTTCTTGCATTAACCGGTTTGGAATTAGGTGTAGCTATTATCTAATAAAGCAGCCTCTATACCTTTTTTTCTTTCTTCTTCTGCAGCACCCTGTTCAAATCATCAATTCTATCAGTTCCTGGTTCGTTGGTACTACCTCCATTCAATCTTCGGTCACAACATAGGTCGCGGATTCCCTTTGCTTTATGATCCGGAATCCATATACCCTTTTCTCAACAATGAATGA

mRNA sequence

ATGCCTACATTAAATCAATTGATTCGTCGTCATGGTAGAGAAGAAAAACGGCGCACGAATCGTACTCGAGCTTCGGATCAATGTCCCCAAAAGCAAGGAGTACGCCCCCGTCTTTCAACGAGAACACCGAAAAAACCTAATTCAGCTCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTCCGGGCGAAGGTCATAATTTGCAGGAACATTCTATGGTCTTAATAAGAGGAGGTAGAGTGAAAGATTCGCCAGGAGGAAACTCAGTACCAAATGCTTGGCAATCCTTGGTAGAGCTTATTTATGATTTCGTGCCGAACCTGGTAAACGAACAAATAGGTGGTCTTTCCGGATCCGAAAATGTGAAACAAAAGTTTTTCCCTCGCATCTCGGTCACTTTGACTTTTTCGTTATTTCGTAATCCCCAGGGTATGTTACCTTATAGCTTCACAGTTACAAGTCATTTTCTCATTACTTTGGGTCTCTCATTTTCTCTTTTTATTGGTATTACTATAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCGTTGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGAGCTAATCCCTCATTGTTTTCGCGCATTAAGCTCAGGAATACGGTTATTTGCTAATATGATGGCCGGTCATAGTTCAGTAAAGATTTTAAGTGGGTCCGCTTGGACTATGCTATGTATGAATAATATTTTCTATTTCATAGGAGATCCTAGTCCTTTATTTATAGTTCTTGCATTAACCGGTTTGGAATTAGCACCCTGTTCAAATCATCAATTCTATCAGTTCCTGGTTCGTTGGTACTACCTCCATTCAATCTTCGGTCACAACATAGGTCGCGGATTCCCTTTGCTTTATGATCCGGAATCCATATACCCTTTTCTCAACAATGAATGA

Coding sequence (CDS)

ATGCCTACATTAAATCAATTGATTCGTCGTCATGGTAGAGAAGAAAAACGGCGCACGAATCGTACTCGAGCTTCGGATCAATGTCCCCAAAAGCAAGGAGTACGCCCCCGTCTTTCAACGAGAACACCGAAAAAACCTAATTCAGCTCCACGTAAGATAGCCAAAGTACGGTTGAGCAATCGACATGATATATTTGCTCACATTCCGGGCGAAGGTCATAATTTGCAGGAACATTCTATGGTCTTAATAAGAGGAGGTAGAGTGAAAGATTCGCCAGGAGGAAACTCAGTACCAAATGCTTGGCAATCCTTGGTAGAGCTTATTTATGATTTCGTGCCGAACCTGGTAAACGAACAAATAGGTGGTCTTTCCGGATCCGAAAATGTGAAACAAAAGTTTTTCCCTCGCATCTCGGTCACTTTGACTTTTTCGTTATTTCGTAATCCCCAGGGTATGTTACCTTATAGCTTCACAGTTACAAGTCATTTTCTCATTACTTTGGGTCTCTCATTTTCTCTTTTTATTGGTATTACTATAGTGGGATTTCAAAGAAATGGGCTTCATTTTTTAAGTTTCTCATTACCCGTTGGAGTCCCACTGCCATTAGCACCTTTTTTAGTACTCCTTGAGCTAATCCCTCATTGTTTTCGCGCATTAAGCTCAGGAATACGGTTATTTGCTAATATGATGGCCGGTCATAGTTCAGTAAAGATTTTAAGTGGGTCCGCTTGGACTATGCTATGTATGAATAATATTTTCTATTTCATAGGAGATCCTAGTCCTTTATTTATAGTTCTTGCATTAACCGGTTTGGAATTAGCACCCTGTTCAAATCATCAATTCTATCAGTTCCTGGTTCGTTGGTACTACCTCCATTCAATCTTCGGTCACAACATAGGTCGCGGATTCCCTTTGCTTTATGATCCGGAATCCATATACCCTTTTCTCAACAATGAATGA

Protein sequence

MPTLNQLIRRHGREEKRRTNRTRASDQCPQKQGVRPRLSTRTPKKPNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISVTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVPLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDPSPLFIVLALTGLELAPCSNHQFYQFLVRWYYLHSIFGHNIGRGFPLLYDPESIYPFLNNE

Homology

[Close]

BLAST of CmaCh12G006690 vs. Swiss-Prot
Match: ATP6_TOBAC (ATP synthase subunit a OS=Nicotiana tabacum GN=ATP6 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.1e-86
Identity = 168/214 (78.50%), Postives = 180/214 (84.11%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V    GGNSVPNAWQSLVELIYDFV N VNEQIGGLSG  NVKQKF PRIS
Sbjct: 165 SLVLLLVYFVTKKGGGNSVPNAWQSLVELIYDFVLNPVNEQIGGLSG--NVKQKFSPRIS 224

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VT TFSLF NPQGM+PYSFTVTSHFLITLGLSFS+FIGITIVGFQ+NGLHFLSF LP GV
Sbjct: 225 VTFTFSLFCNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQKNGLHFLSFLLPAGV 284

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIP+CFRALSSGIRLFANMMAGHSSVKILSG AWTMLCMN++ YFIGD
Sbjct: 285 PLPLAPFLVLLELIPYCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLLYFIGD 344

Query: 259 PSPLFIVLALTGLELAPCSNHQFYQFLVRWYYLH 293
             PLFIVLALTGLEL    +      ++   YL+
Sbjct: 345 LGPLFIVLALTGLELGVAISQAHVSTILICIYLN 376

[Close]

BLAST of CmaCh12G006690 vs. Swiss-Prot
Match: ATP6_MAIZE (ATP synthase subunit a OS=Zea mays GN=ATP6 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-83
Identity = 162/194 (83.51%), Postives = 171/194 (88.14%), Query Frame = 1


Query: 80  MVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISV 139
           +VL+    V    GG SVPNA+QSLVELIYDFVPNLVNEQIGGLSG  NVK KFFP ISV
Sbjct: 60  LVLLLVFVVTKKGGGKSVPNAFQSLVELIYDFVPNLVNEQIGGLSG--NVKHKFFPCISV 119

Query: 140 TLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVP 199
           T TFSLFRNPQGM+P+SFTVTSHFLITL LSFS+FIGITIVGFQR+GLHF SF LP GVP
Sbjct: 120 TFTFSLFRNPQGMIPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVP 179

Query: 200 LPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDP 259
           LPLAPFLVLLELI HCFRALSSGIRLFANMMAGHSSVKILSG AWTML +NNIFYF+GD 
Sbjct: 180 LPLAPFLVLLELISHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLFLNNIFYFLGDL 239

Query: 260 SPLFIVLALTGLEL 274
            PLFIVLALTGLEL
Sbjct: 240 GPLFIVLALTGLEL 251

[Close]

BLAST of CmaCh12G006690 vs. Swiss-Prot
Match: ATP6_TRITI (ATP synthase subunit a OS=Triticum timopheevii GN=ATP6 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-82
Identity = 159/181 (87.85%), Postives = 165/181 (91.16%), Query Frame = 1


Query: 93  GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISVTLTFSLFRNPQGM 152
           GG SVPNAWQSLVELIYDFV NLVNEQIGGLSG  NVKQKFFPRISVT TFSLFRNPQGM
Sbjct: 176 GGKSVPNAWQSLVELIYDFVLNLVNEQIGGLSG--NVKQKFFPRISVTFTFSLFRNPQGM 235

Query: 153 LPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVPLPLAPFLVLLELI 212
           +P+SFTVTSHFLITL LSFS+FIGITIVGFQR+GLHF SF LP GVPLPLAPFLVLLELI
Sbjct: 236 IPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 295

Query: 213 PHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDPSPLFIVLALTGLE 272
            +CFRALS GIRLFANMMAGHS VKILSG AWTML +NNIFYFIGD  PLFIVLALTGLE
Sbjct: 296 SYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFIGDLGPLFIVLALTGLE 354

Query: 273 L 274
           L
Sbjct: 356 L 354

[Close]

BLAST of CmaCh12G006690 vs. Swiss-Prot
Match: ATP6_WHEAT (ATP synthase subunit a OS=Triticum aestivum GN=ATP6 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-82
Identity = 159/181 (87.85%), Postives = 165/181 (91.16%), Query Frame = 1


Query: 93  GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISVTLTFSLFRNPQGM 152
           GG SVPNAWQSLVELIYDFV NLVNEQIGGLSG  NVKQKFFPRISVT TFSLFRNPQGM
Sbjct: 176 GGKSVPNAWQSLVELIYDFVLNLVNEQIGGLSG--NVKQKFFPRISVTFTFSLFRNPQGM 235

Query: 153 LPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVPLPLAPFLVLLELI 212
           +P+SFTVTSHFLITL LSFS+FIGITIVGFQR+GLHF SF LP GVPLPLAPFLVLLELI
Sbjct: 236 IPFSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 295

Query: 213 PHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDPSPLFIVLALTGLE 272
            +CFRALS GIRLFANMMAGHS VKILSG AWTML +NNIFYFIGD  PLFIVLALTGLE
Sbjct: 296 SYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLFLNNIFYFIGDLGPLFIVLALTGLE 354

Query: 273 L 274
           L
Sbjct: 356 L 354

[Close]

BLAST of CmaCh12G006690 vs. Swiss-Prot
Match: ATP6_OENBE (ATP synthase subunit a OS=Oenothera berteroana GN=ATP6 PE=2 SV=2)

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-82
Identity = 162/195 (83.08%), Postives = 169/195 (86.67%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V    GGN VPNAWQSLVELIYDFV NLVNEQIGGLSG  NVKQKFFP I 
Sbjct: 64  SLVLLLVNFVTKKGGGNLVPNAWQSLVELIYDFVLNLVNEQIGGLSG--NVKQKFFPCIL 123

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VT TF LF N QGM+PYSFTVTSHFLITLGLSFS+FIGITIVGFQRNGLHFLSF LP GV
Sbjct: 124 VTFTFLLFCNLQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSFLLPAGV 183

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELI +CFRALS GIRLFANMMAGHS VKILSG AWTMLCMN++FYFIGD
Sbjct: 184 PLPLAPFLVLLELISYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDLFYFIGD 243

Query: 259 PSPLFIVLALTGLEL 274
             PLFIVLALTGLEL
Sbjct: 244 LGPLFIVLALTGLEL 256

[Close]

BLAST of CmaCh12G006690 vs. TrEMBL
Match: G3EU41_CUCME (ATP synthase subunit a OS=Cucumis melo subsp. melo GN=atp6 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.5e-91
Identity = 176/195 (90.26%), Postives = 181/195 (92.82%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V  + GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG  NVKQKFFPRIS
Sbjct: 47  SLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG--NVKQKFFPRIS 106

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VTLTFSLFRNPQGM+PYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHF SF LP GV
Sbjct: 107 VTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFFSFLLPAGV 166

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNN+ YFIGD
Sbjct: 167 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNLLYFIGD 226

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 227 PGPLFIVLALTGLEL 239

[Close]

BLAST of CmaCh12G006690 vs. TrEMBL
Match: G3EIZ6_CUCSA (ATP synthase subunit a OS=Cucumis sativus GN=atp6 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.4e-91
Identity = 176/195 (90.26%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V  + GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG  NVKQKFFPRI 
Sbjct: 38  SLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG--NVKQKFFPRIL 97

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VTLTFSLFRNPQGM+PYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHF SF LP GV
Sbjct: 98  VTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFFSFLLPAGV 157

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNI YFIGD
Sbjct: 158 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNILYFIGD 217

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 218 PGPLFIVLALTGLEL 230

[Close]

BLAST of CmaCh12G006690 vs. TrEMBL
Match: B2VPW6_9ROSI (ATP synthase subunit a (Fragment) OS=Paxistima canbyi GN=atp6 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.8e-91
Identity = 174/195 (89.23%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S VL+    V    GGNSVPNAWQSLVELIYDFVPN VNEQIGGLSG  NVKQKFFPRIS
Sbjct: 8   SFVLLLLSFVTKKGGGNSVPNAWQSLVELIYDFVPNPVNEQIGGLSG--NVKQKFFPRIS 67

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VT TFSLFRNPQGM+PYSFTVTSHF+ITLGLSFSLFIGIT+VGFQRNGLHFLSFSLP GV
Sbjct: 68  VTFTFSLFRNPQGMIPYSFTVTSHFIITLGLSFSLFIGITLVGFQRNGLHFLSFSLPAGV 127

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMN++FYFIGD
Sbjct: 128 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFIGD 187

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 188 PGPLFIVLALTGLEL 200

[Close]

BLAST of CmaCh12G006690 vs. TrEMBL
Match: W6JLQ4_HEVBR (ATP synthase subunit a OS=Hevea brasiliensis GN=atp6 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 6.4e-90
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V    GG SVPNAWQSLVEL+YDFVPN VNEQIGGLSG  NVKQKFFPRIS
Sbjct: 22  SLVLLLFYFVTKKGGGKSVPNAWQSLVELLYDFVPNPVNEQIGGLSG--NVKQKFFPRIS 81

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VTLTFSLFRNPQGM+PYSFTVTSHFLITLGLSFSLFIGITIVGFQ+NGLHFLSFSLP GV
Sbjct: 82  VTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITIVGFQKNGLHFLSFSLPAGV 141

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSG AWTMLCMN++FYFIGD
Sbjct: 142 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFIGD 201

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 202 PGPLFIVLALTGLEL 214

[Close]

BLAST of CmaCh12G006690 vs. TrEMBL
Match: A0A142BZ05_ZIZJJ (ATP synthase subunit a OS=Ziziphus jujuba GN=atp6 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 8.4e-90
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V  + GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG  NVKQKFFPRIS
Sbjct: 40  SLVLLLVHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG--NVKQKFFPRIS 99

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VT TFSLFRNPQGM+PYSFTVTSHFLITLGLSFS+FIGITIVGFQRNGLHFLS SLP GV
Sbjct: 100 VTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSLSLPAGV 159

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSG AWTMLCMN+IF+FIGD
Sbjct: 160 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDIFFFIGD 219

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTG EL
Sbjct: 220 PGPLFIVLALTGPEL 232

[Close]

BLAST of CmaCh12G006690 vs. TAIR10
Match: AT2G07741.1 (AT2G07741.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 287.7 bits (735), Expect = 8.6e-78
Identity = 151/181 (83.43%), Postives = 157/181 (86.74%), Query Frame = 1


Query: 93  GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISVTLTFSLFRNPQGM 152
           GGN VPNAWQSLVEL+YDFV NLV EQIGGLSG  NVKQ FFP I VT  F LF N QGM
Sbjct: 182 GGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSG--NVKQMFFPCILVTFLFLLFCNLQGM 241

Query: 153 LPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVPLPLAPFLVLLELI 212
           +PYSFTVTSHFLITL LSFS+FIGITIVGFQR+GLHF SF LP GVPLPLAPFLVLLELI
Sbjct: 242 IPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 301

Query: 213 PHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDPSPLFIVLALTGLE 272
            +CFRALS GIRLFANMMAGHS VKILSG AWTMLCMN+IFYFIG   PLFIVLALTGLE
Sbjct: 302 SYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALGPLFIVLALTGLE 360

Query: 273 L 274
           L
Sbjct: 362 L 360

[Close]

BLAST of CmaCh12G006690 vs. TAIR10
Match: ATMG01170.1 (ATMG01170.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 287.7 bits (735), Expect = 8.6e-78
Identity = 151/181 (83.43%), Postives = 157/181 (86.74%), Query Frame = 1


Query: 93  GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISVTLTFSLFRNPQGM 152
           GGN VPNAWQSLVEL+YDFV NLV EQIGGLSG  NVKQ FFP I VT  F LF N QGM
Sbjct: 146 GGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSG--NVKQMFFPCILVTFLFLLFCNLQGM 205

Query: 153 LPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVPLPLAPFLVLLELI 212
           +PYSFTVTSHFLITL LSFS+FIGITIVGFQR+GLHF SF LP GVPLPLAPFLVLLELI
Sbjct: 206 IPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 265

Query: 213 PHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDPSPLFIVLALTGLE 272
            +CFRALS GIRLFANMMAGHS VKILSG AWTMLCMN+IFYFIG   PLFIVLALTGLE
Sbjct: 266 SYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALGPLFIVLALTGLE 324

Query: 273 L 274
           L
Sbjct: 326 L 324

[Close]

BLAST of CmaCh12G006690 vs. TAIR10
Match: ATMG00410.1 (ATMG00410.1 ATPase subunit 6-1)

HSP 1 Score: 287.7 bits (735), Expect = 8.6e-78
Identity = 151/181 (83.43%), Postives = 157/181 (86.74%), Query Frame = 1


Query: 93  GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRISVTLTFSLFRNPQGM 152
           GGN VPNAWQSLVEL+YDFV NLV EQIGGLSG  NVKQ FFP I VT  F LF N QGM
Sbjct: 182 GGNLVPNAWQSLVELLYDFVLNLVKEQIGGLSG--NVKQMFFPCILVTFLFLLFCNLQGM 241

Query: 153 LPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGVPLPLAPFLVLLELI 212
           +PYSFTVTSHFLITL LSFS+FIGITIVGFQR+GLHF SF LP GVPLPLAPFLVLLELI
Sbjct: 242 IPYSFTVTSHFLITLALSFSIFIGITIVGFQRHGLHFFSFLLPAGVPLPLAPFLVLLELI 301

Query: 213 PHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGDPSPLFIVLALTGLE 272
            +CFRALS GIRLFANMMAGHS VKILSG AWTMLCMN+IFYFIG   PLFIVLALTGLE
Sbjct: 302 SYCFRALSLGIRLFANMMAGHSLVKILSGFAWTMLCMNDIFYFIGALGPLFIVLALTGLE 360

Query: 273 L 274
           L
Sbjct: 362 L 360

[Close]

BLAST of CmaCh12G006690 vs. TAIR10
Match: AT2G07675.1 (AT2G07675.1 Ribosomal protein S12/S23 family protein)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-40
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 1


Query: 1  MPTLNQLIRRHGREEKRRTNRTRASDQCPQKQGVRPRLSTRTPKKPNSAPRKIAKVRLSN 60
          MPT NQLIR HGREEKRRT+RTRA D+CPQK GV PR+STRTPKKPNSAPRKIAKVRLSN
Sbjct: 1  MPTFNQLIR-HGREEKRRTDRTRALDKCPQKTGVCPRVSTRTPKKPNSAPRKIAKVRLSN 60

Query: 61 RHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGGNS 97
          RHDIFAHIPGEGHN QEHS VLIRGGRVKDSPG  S
Sbjct: 61 RHDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKS 95

[Close]

BLAST of CmaCh12G006690 vs. TAIR10
Match: ATMG00980.1 (ATMG00980.1 Ribosomal protein S12/S23 family protein)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-40
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 1


Query: 1  MPTLNQLIRRHGREEKRRTNRTRASDQCPQKQGVRPRLSTRTPKKPNSAPRKIAKVRLSN 60
          MPT NQLIR HGREEKRRT+RTRA D+CPQK GV PR+STRTPKKPNSAPRKIAKVRLSN
Sbjct: 1  MPTFNQLIR-HGREEKRRTDRTRALDKCPQKTGVCPRVSTRTPKKPNSAPRKIAKVRLSN 60

Query: 61 RHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGGNS 97
          RHDIFAHIPGEGHN QEHS VLIRGGRVKDSPG  S
Sbjct: 61 RHDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKS 95

[Close]

BLAST of CmaCh12G006690 vs. NCBI nr
Match: gi|345034445|gb|AEN56130.1| (ATPase subunit 6 [Cucumis melo subsp. melo])

HSP 1 Score: 344.4 bits (882), Expect = 2.2e-91
Identity = 176/195 (90.26%), Postives = 181/195 (92.82%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V  + GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG  NVKQKFFPRIS
Sbjct: 47  SLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG--NVKQKFFPRIS 106

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VTLTFSLFRNPQGM+PYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHF SF LP GV
Sbjct: 107 VTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFFSFLLPAGV 166

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNN+ YFIGD
Sbjct: 167 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNLLYFIGD 226

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 227 PGPLFIVLALTGLEL 239

[Close]

BLAST of CmaCh12G006690 vs. NCBI nr
Match: gi|346683382|ref|YP_004849344.1| (ATPase subunit 6 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 6.4e-91
Identity = 176/195 (90.26%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V  + GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG  NVKQKFFPRI 
Sbjct: 38  SLVLLLLHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG--NVKQKFFPRIL 97

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VTLTFSLFRNPQGM+PYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHF SF LP GV
Sbjct: 98  VTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFFSFLLPAGV 157

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNI YFIGD
Sbjct: 158 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNILYFIGD 217

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 218 PGPLFIVLALTGLEL 230

[Close]

BLAST of CmaCh12G006690 vs. NCBI nr
Match: gi|187237015|gb|ACD02184.1| (ATPase subunit 6, partial (mitochondrion) [Paxistima canbyi])

HSP 1 Score: 342.4 bits (877), Expect = 8.3e-91
Identity = 174/195 (89.23%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S VL+    V    GGNSVPNAWQSLVELIYDFVPN VNEQIGGLSG  NVKQKFFPRIS
Sbjct: 8   SFVLLLLSFVTKKGGGNSVPNAWQSLVELIYDFVPNPVNEQIGGLSG--NVKQKFFPRIS 67

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VT TFSLFRNPQGM+PYSFTVTSHF+ITLGLSFSLFIGIT+VGFQRNGLHFLSFSLP GV
Sbjct: 68  VTFTFSLFRNPQGMIPYSFTVTSHFIITLGLSFSLFIGITLVGFQRNGLHFLSFSLPAGV 127

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMN++FYFIGD
Sbjct: 128 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNDLFYFIGD 187

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 188 PGPLFIVLALTGLEL 200

[Close]

BLAST of CmaCh12G006690 vs. NCBI nr
Match: gi|584592153|dbj|BAO50904.1| (ATP synthase F0 subunit 6 (mitochondrion) [Hevea brasiliensis])

HSP 1 Score: 339.0 bits (868), Expect = 9.2e-90
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V    GG SVPNAWQSLVEL+YDFVPN VNEQIGGLSG  NVKQKFFPRIS
Sbjct: 22  SLVLLLFYFVTKKGGGKSVPNAWQSLVELLYDFVPNPVNEQIGGLSG--NVKQKFFPRIS 81

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VTLTFSLFRNPQGM+PYSFTVTSHFLITLGLSFSLFIGITIVGFQ+NGLHFLSFSLP GV
Sbjct: 82  VTLTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSLFIGITIVGFQKNGLHFLSFSLPAGV 141

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSG AWTMLCMN++FYFIGD
Sbjct: 142 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDLFYFIGD 201

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTGLEL
Sbjct: 202 PGPLFIVLALTGLEL 214

[Close]

BLAST of CmaCh12G006690 vs. NCBI nr
Match: gi|1016470805|ref|YP_009241666.1| (ATPase subunit 6 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 338.6 bits (867), Expect = 1.2e-89
Identity = 173/195 (88.72%), Postives = 180/195 (92.31%), Query Frame = 1


Query: 79  SMVLIRGGRVKDSPGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSGSENVKQKFFPRIS 138
           S+VL+    V  + GGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG  NVKQKFFPRIS
Sbjct: 40  SLVLLLVHFVTKNGGGNSVPNAWQSLVELIYDFVPNLVNEQIGGLSG--NVKQKFFPRIS 99

Query: 139 VTLTFSLFRNPQGMLPYSFTVTSHFLITLGLSFSLFIGITIVGFQRNGLHFLSFSLPVGV 198
           VT TFSLFRNPQGM+PYSFTVTSHFLITLGLSFS+FIGITIVGFQRNGLHFLS SLP GV
Sbjct: 100 VTFTFSLFRNPQGMIPYSFTVTSHFLITLGLSFSIFIGITIVGFQRNGLHFLSLSLPAGV 159

Query: 199 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGSAWTMLCMNNIFYFIGD 258
           PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSG AWTMLCMN+IF+FIGD
Sbjct: 160 PLPLAPFLVLLELIPHCFRALSSGIRLFANMMAGHSSVKILSGFAWTMLCMNDIFFFIGD 219

Query: 259 PSPLFIVLALTGLEL 274
           P PLFIVLALTG EL
Sbjct: 220 PGPLFIVLALTGPEL 232

The following BLAST results are available for this feature:

BLAST of CmaCh12G006690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATP6_TOBAC	8.1e-86	78.50	ATP synthase subunit a OS=Nicotiana tabacum GN=ATP6 PE=3 SV=1	[more]
ATP6_MAIZE	1.7e-83	83.51	ATP synthase subunit a OS=Zea mays GN=ATP6 PE=3 SV=1	[more]
ATP6_TRITI	1.1e-82	87.85	ATP synthase subunit a OS=Triticum timopheevii GN=ATP6 PE=3 SV=1	[more]
ATP6_WHEAT	1.1e-82	87.85	ATP synthase subunit a OS=Triticum aestivum GN=ATP6 PE=3 SV=1	[more]
ATP6_OENBE	1.4e-82	83.08	ATP synthase subunit a OS=Oenothera berteroana GN=ATP6 PE=2 SV=2	[more]

BLAST of CmaCh12G006690 vs. TrEMBL


Match Name	E-value	Identity	Description
G3EU41_CUCME	1.5e-91	90.26	ATP synthase subunit a OS=Cucumis melo subsp. melo GN=atp6 PE=3 SV=1	[more]
G3EIZ6_CUCSA	4.4e-91	90.26	ATP synthase subunit a OS=Cucumis sativus GN=atp6 PE=3 SV=1	[more]
B2VPW6_9ROSI	5.8e-91	89.23	ATP synthase subunit a (Fragment) OS=Paxistima canbyi GN=atp6 PE=4 SV=1	[more]
W6JLQ4_HEVBR	6.4e-90	88.72	ATP synthase subunit a OS=Hevea brasiliensis GN=atp6 PE=3 SV=1	[more]
A0A142BZ05_ZIZJJ	8.4e-90	88.72	ATP synthase subunit a OS=Ziziphus jujuba GN=atp6 PE=3 SV=1	[more]

BLAST of CmaCh12G006690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G07741.1	8.6e-78	83.43	ATPase, F0 complex, subunit A protein	[more]
ATMG01170.1	8.6e-78	83.43	ATMG01170.1 ATPase, F0 complex, subunit A protein	[more]
ATMG00410.1	8.6e-78	83.43	ATMG00410.1 ATPase subunit 6-1	[more]
AT2G07675.1	1.9e-40	87.50	Ribosomal protein S12/S23 family protein	[more]
ATMG00980.1	1.9e-40	87.50	ATMG00980.1 Ribosomal protein S12/S23 family protein	[more]

BLAST of CmaCh12G006690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|345034445\|gb\|AEN56130.1\|	2.2e-91	90.26	ATPase subunit 6 [Cucumis melo subsp. melo]	[more]
gi\|346683382\|ref\|YP_004849344.1\|	6.4e-91	90.26	ATPase subunit 6 [Cucumis sativus]	[more]
gi\|187237015\|gb\|ACD02184.1\|	8.3e-91	89.23	ATPase subunit 6, partial (mitochondrion) [Paxistima canbyi]	[more]
gi\|584592153\|dbj\|BAO50904.1\|	9.2e-90	88.72	ATP synthase F0 subunit 6 (mitochondrion) [Hevea brasiliensis]	[more]
gi\|1016470805\|ref\|YP_009241666.1\|	1.2e-89	88.72	ATPase subunit 6 (mitochondrion) [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000568	ATP_synth_F0_asu
IPR005679	Ribosomal_S12_bac
IPR006032	Ribosomal_S12/S23
IPR012340	NA-bd_OB-fold
IPR023011	ATP_synth_F0_asu_AS

Vocabulary: **Molecular Function**
Term	Definition
GO:0015078	hydrogen ion transmembrane transporter activity
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0015935	small ribosomal subunit
GO:0005622	intracellular
GO:0005840	ribosome

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0015078	hydrogen ion transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G006690.1	CmaCh12G006690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000568	ATPase, F0 complex, subunit A	GENE3D	G3DSA:1.20.120.220		coord: 130..274 score: 2.5
IPR000568	ATPase, F0 complex, subunit A	PANTHER	PTHR11410	ATP SYNTHASE SUBUNIT A	coord: 93..274 score: 1.3
IPR000568	ATPase, F0 complex, subunit A	PFAM	PF00119	ATP-synt_A	coord: 96..252 score: 1.3
IPR000568	ATPase, F0 complex, subunit A	TIGRFAMs	TIGR01131	TIGR01131	coord: 95..274 score: 6.2
IPR000568	ATPase, F0 complex, subunit A	unknown	SSF81336	F1F0 ATP synthase subunit A	coord: 129..274 score: 1.57
IPR005679	Ribosomal protein S12, bacterial-type	TIGRFAMs	TIGR00981	TIGR00981	coord: 1..93 score: 1.0
IPR006032	Ribosomal protein S12/S23	PRINTS	PR01034	RIBOSOMALS12	coord: 28..43 score: 6.6E-34coord: 78..95 score: 6.6E-34coord: 43..58 score: 6.6E-34coord: 59..78 score: 6.6
IPR006032	Ribosomal protein S12/S23	PFAM	PF00164	Ribosom_S12_S23	coord: 10..93 score: 5.1
IPR006032	Ribosomal protein S12/S23	PROSITE	PS00055	RIBOSOMAL_S12	coord: 44..51 scor
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	G3DSA:2.40.50.140		coord: 1..93 score: 2.6
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 9..93 score: 4.28
IPR023011	ATPase, F0 complex, subunit A, active site	PROSITE	PS00449	ATPASE_A	coord: 220..229 scor
None	No IPR available	PANTHER	PTHR11410:SF0	ATP SYNTHASE SUBUNIT A	coord: 93..274 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh12G006690	Cucumber (Chinese Long) v3	cmacucB0224
CmaCh12G006690	Watermelon (97103) v2	cmawmbB200
CmaCh12G006690	Wax gourd	cmawgoB0205
CmaCh12G006690	Cucurbita maxima (Rimu)	cmacmaB181
CmaCh12G006690	Cucurbita maxima (Rimu)	cmacmaB201
CmaCh12G006690	Cucumber (Gy14) v1	cgycmaB0129
CmaCh12G006690	Cucurbita moschata (Rifu)	cmacmoB176
CmaCh12G006690	Cucurbita moschata (Rifu)	cmacmoB201
CmaCh12G006690	Wild cucumber (PI 183967)	cmacpiB188
CmaCh12G006690	Wild cucumber (PI 183967)	cmacpiB198
CmaCh12G006690	Cucumber (Chinese Long) v2	cmacuB195
CmaCh12G006690	Melon (DHL92) v3.5.1	cmameB164
CmaCh12G006690	Melon (DHL92) v3.5.1	cmameB183
CmaCh12G006690	Watermelon (Charleston Gray)	cmawcgB175
CmaCh12G006690	Watermelon (97103) v1	cmawmB153
CmaCh12G006690	Cucurbita pepo (Zucchini)	cmacpeB181
CmaCh12G006690	Cucurbita pepo (Zucchini)	cmacpeB203
CmaCh12G006690	Bottle gourd (USVL1VR-Ls)	cmalsiB190
CmaCh12G006690	Cucumber (Gy14) v2	cgybcmaB480
CmaCh12G006690	Cucumber (Gy14) v2	cgybcmaB718
CmaCh12G006690	Melon (DHL92) v3.6.1	cmamedB179
CmaCh12G006690	Melon (DHL92) v3.6.1	cmamedB199
CmaCh12G006690	Silver-seed gourd	carcmaB0172
CmaCh12G006690	Silver-seed gourd	carcmaB0289
CmaCh12G006690	Silver-seed gourd	carcmaB0502