CmaCh12G005950 (gene) Cucurbita maxima (Rimu)

NameCmaCh12G005950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr12 : 3102773 .. 3107051 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAATAATTTTGAATATCTGCAGAAACTTCTTTATTTTGAAGTTAAGTAGTTTATGTCTTTCTTTCTCTGAATATGCCTTATTTGAATGAGTTTATAATGATCACTCTTTTCCTTGGCCAATGTGAAACCTTGTATGTACTCCTAGCAATCTTCCCCCTGAAGGTAGTACCTTTTTAGGCTTTTTTGTTGACTTGATCCGACCAATATCCAATCACATTGTGGGATATTCCCTAACGGTGACGATCACCTATCGCATTGTCTACCTCCTCCCCCTCGAACGAAGATCTACTCCTCTATTGGGGAGTATTGATGAGTTATTACTTGCTTGTCACCTAAATTACTTTTTTGTTTGATGAGGGATCATCCTAACGTTTTATGAATGTAAAGTGGTAATGGTCCAAGCCTAGGGCTAGCAGATGTTGTCTGCTTTAACCCGTTATGTATCATCATTAGTTTCACAGTTTTAAAACGCAAAGAGGACATTAGGCATAATGTTTATGTATCTGCTAGCTCATTGAGGTCACGTATAGTTGTTAGCTCAAAAAGAACTATATTGGTCATTGATGGACTTGAGTTGTTACAAATGTTCACTAAGTGTCTTTATTTAGAACTTAAAATATCTTCGAAACACCATTTGGACATTCAAAAAGTTTTAGGATTCTTTTAGGAGATGTAATGGTCTAACTTTACCGTTAGTAAATATTGTCATCTTTGGGTTTTTTCTTTCGGACTTTCTCTCAAGGTTTTTAAAAAGCATCTAGGGAAAGATTTTCATACCCTCGAAAAAGTATTTCATTCCTCTCTCCAACGGAACTTGGGATCCCACATAAGCTCTCTTTCCTTTTCTTTTAGCTTTTGTCGTTTTTCTTTATATATATATATATATCAAAACAGACTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTTCTNATCCCACTTGAAATTGAATTATAAATTTAAATTTAATGTTTTAGATTAAAAAAAATAAATATTTTTGAATAAAAGAGATAAAAACAATCTAATTCAATCCAATTTAATATATTTTATGTTGGATCGAATTTATTATTTAATAAAACTTATTTGAATAGAATCAAAATATATCTAAATGCCATAAGTGTGCTTCGTCTACTTCGTCTAGAAGACTCGAGACATACTAGAATTTAGAAAAAAAAAAAAAAACACAACCAAAAAAAGATAAGTCATTAATTAATATAAAGGAATAATTTAGGTGAGAATTAAGAATTGATACATTTATTAAATTAGAATTATCTCGATACAAGTTTCTTCCCTATCCATATAATTTGTTTTTAATAATCGGACGACTTGACATTAATATAAATAAATTATCCTTTTTTTCAAAAAAAAAAAAACACATAATAATTAATGATATTAGTTTTCTATATATATAAACAATTTAATATACATTAGAATAGTCCATTCCCTGATAATTTAGAAACATAAGATAATTAAAACGTTAATTAACAAATATGTGTTCAATATTTAAAGCTTGCATGAATAGTGCTGTTTATAGATTAATTCATTATGTGTCATTTCAGCCTTAAATAAATATATTTTTTTTCAATGTCGGAAAATTACGAGAATGTGTATTTTCTATTTTTTTTTATTTAAAAAATATTCATATAATTAGCCGTCTTTTATTATTATTTAAAAAGTATTCAAACTTCTAACTTTTCAAAATCTATAAATTACCTAACGCAATTTGAAATATTAAAAGCTTTAATCGTAAAATTGTTTAGTTTATATATCTCTAATATGTTTTGTTTCAGTCACATTTGTAGCGGTTATCAATAAAAAATTAATTAGTATTTTTTGTGGTTCTTTTATTAGATTTAAAAATTATGTTATAAAATTTTGTTCATATGGATTAATTTTATATTTTATTGTTTAAATTCTTTTATCAACGAATAATATTTACAATAAGGTGGTTCACATAACATGAGTAAATCAACATTTAAAAATAAATGTATACATTAAAAAGTTTTTTTTAAATGACTATTTTTAAAAAATAATAATAAATAGAAAAAAATATCCCGCAGAAAATTTCTAATCCAATCATCACGAAAATAAATAGAAAAATATTTCTAATCCAATCATCACAAAAATAAATAGAAAAATTTCACAGGGACCGAAGATGAAATAAATGATAGGGACAAGATTAGGGAAAGTTTTCTCATCCCGTCCTATCCAATAAACATCTCTAATTATAGCGACTGACTAAAAAATTGAAGAGTGCACTTAATTTTTTGGGAGGGAAAAAATATCAAATTTATAGAAAATTTAAGTCTACATTTATATGCATAAATGTTAGCATGAATGTGCTAATAATACTTTACAATTCTATATGATTATTATGTGGGTAAAATAAAGGATCTTCGTGGGTCGCTCCCTCTTATATTTTGATGTTATTATGAACTTATTAGAGAGAGGTCGACTATCCTAATAGTGTTCTTGTCTCTGGTGATAGTTTCCATAATGGTACATTAAGAGTTTTTAGAGTTCCGAGCTATGGTGACATATAAAGACGTAATCAAACTACTCTTGAACCTAGAAACATCCCATCCAAGAGAGTGGGTTTCAAGGAGCTGATGAACCAATATGAACGCTGTTAGAGCAAAATGATGAAAAAGTTTAGAATTAGAACACTAAAATATGAACGCTATTAGAGCAAAAGGATGAAAAGTTTAGAGTTAGAACACTAAAATGAGCTTAAGCAAGTTAGTAAAATCTAAATGCTAGTTTTAAAAAAAAAAAACTTATAACTCGTGTATATTTAGGTATAAGCAAGACTCATGAGTAAGTAAAGACATGTATGAATTTTATGATCGTTTAAACGAGCTATCATAGTTTCTTATGATATAAGACACGATTGTTGAGCTCCAATAAATTGTGTCACATTTTTGTATGGATCGATAAAGAGCTAGTTATGTTATCTAATGACTCGAACAACCCTAAGAGATTGATGAAATATTATTAAGGAATGAAAGTAATAATATAAACTTAAGTGAGTCAAGAACTTCAAATAACTCAAGGTAAGGTTAGCGAGTCCTATCCATAGTAGAAAACCTATAATCAAGAATATAGGTTATTATTATTAGAGGCGTATTAGTTAGACAAATGATATGTTTATAGGTTCAGTATAAGAAGAACGTGTAATTAAAGGTTTATAGACGAACTACTTAATGAGTATATTTACGTATTCACTCGTGTTCTATAGGACGGCTACGAGGAAAGAGTAACATTATAAGTGATTTGTCTCGTTAAAGAGTAATGCAACAATATCTTAGCTCAACCCAACATCACATTAATCTAAACATTGACTTACGCATCGAAACATGTTAAACATAACACTATATCATCACGAAGATGGAGCTGACGTAGATTTTAAGATTAGATTTGATAAATAAAAATGCTACTTTCTAATAATAATTTATAAAATATATAGTAATATAAAAATAGGAAATGGAGAAAAAGAGGAATTACACGTGGAACTGTTGAAGAATGCGAATCCGAGTTGGCCAAAAAATTGAACACAATGCGAGAGTCTTGGAGAACCAATTTCGCTTTCTCATTCCCACGTGGAGAATCAACCAAGACGAAGACCACACACACGTGGAAGACCCCTACACACCATGTCCACGTACGCACATTAAACAAATCCAAACAAAATACTTCAAAAATACGGTTTCGGTTTGAAGCCGGTACGTAGAGTGTTATGGACTCTTTTTCTTTAAATTGAAGCTCCGTTATTGTCTCCGAAGGAAATATTGAATATTTAAAAGAGAATAGCTTTTCGAAACTGCTATAGAACACGAATGACAAGTTGCTGGTAGTGTTCCGACGTCGGTCGAACGAAAATTGGATACCATTTTTAGGTGTTGACTATCAATCATACGTGTCGAAGTCATCGCAATATCGAAACAATATCAACCGTCACTCAATTTCTTTTTCACCCGTATTTCAAACGGGCCAATTAAATTATATATAAAATAATTTAAAAATTGTGAGGCGGAAATTAATATTGTGAAGGCGTGGGTTTGGTTTGAAAGGTCGTGCAATGGGCGGCGCAATTCCCGAAGATAAAAGAAAACGAGTGGTCCGGCGAATGCGCCGGAATCTGCGGCGGCGAAGAATGACGACACTTTTGAATAACGGACCCCTTCCCTCCTTCCATCATGGGGTCCTTTTACAATATTGTGATATTTCGAGGGCCTAA

mRNA sequence

ATGGTAATAATTTTGAATATCTGCAGAAACTTCTTTATTTTGAAGTTAAGTATAAGCAAGACTCATGAGAATGAAAGTAATAATATAAACTTAAGTGAGTCAAGAACTTCAAATAACTCAAGGCGTGGGTTTGGTTTGAAAGGTCGTGCAATGGGCGGCGCAATTCCCGAAGATAAAAGAAAACGAGTGGTCCGGCGAATGCGCCGGAATCTGCGGCGGCGAAGAATGACGACACTTTTGAATAACGGACCCCTTCCCTCCTTCCATCATGGGGTCCTTTTACAATATTGTGATATTTCGAGGGCCTAA

Coding sequence (CDS)

ATGGTAATAATTTTGAATATCTGCAGAAACTTCTTTATTTTGAAGTTAAGTATAAGCAAGACTCATGAGAATGAAAGTAATAATATAAACTTAAGTGAGTCAAGAACTTCAAATAACTCAAGGCGTGGGTTTGGTTTGAAAGGTCGTGCAATGGGCGGCGCAATTCCCGAAGATAAAAGAAAACGAGTGGTCCGGCGAATGCGCCGGAATCTGCGGCGGCGAAGAATGACGACACTTTTGAATAACGGACCCCTTCCCTCCTTCCATCATGGGGTCCTTTTACAATATTGTGATATTTCGAGGGCCTAA

Protein sequence

MVIILNICRNFFILKLSISKTHENESNNINLSESRTSNNSRRGFGLKGRAMGGAIPEDKRKRVVRRMRRNLRRRRMTTLLNNGPLPSFHHGVLLQYCDISRA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G005950.1CmaCh12G005950.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G005950Cucurbita pepo (Zucchini)cmacpeB168
CmaCh12G005950Cucurbita pepo (Zucchini)cmacpeB179
CmaCh12G005950Cucurbita pepo (Zucchini)cmacpeB192
CmaCh12G005950Cucurbita pepo (Zucchini)cmacpeB199
CmaCh12G005950Cucurbita pepo (Zucchini)cmacpeB187
CmaCh12G005950Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G005950Bottle gourd (USVL1VR-Ls)cmalsiB174
CmaCh12G005950Bottle gourd (USVL1VR-Ls)cmalsiB184
CmaCh12G005950Cucumber (Gy14) v2cgybcmaB179
CmaCh12G005950Cucumber (Gy14) v2cgybcmaB479
CmaCh12G005950Cucumber (Gy14) v2cgybcmaB715
CmaCh12G005950Cucumber (Gy14) v2cgybcmaB906
CmaCh12G005950Melon (DHL92) v3.6.1cmamedB170
CmaCh12G005950Melon (DHL92) v3.6.1cmamedB198
CmaCh12G005950Melon (DHL92) v3.6.1cmamedB200
CmaCh12G005950Silver-seed gourdcarcmaB0002
CmaCh12G005950Silver-seed gourdcarcmaB0249
CmaCh12G005950Silver-seed gourdcarcmaB0449
CmaCh12G005950Silver-seed gourdcarcmaB0557
CmaCh12G005950Silver-seed gourdcarcmaB0631
CmaCh12G005950Silver-seed gourdcarcmaB1067
CmaCh12G005950Cucumber (Chinese Long) v3cmacucB0203
CmaCh12G005950Cucumber (Chinese Long) v3cmacucB0215
CmaCh12G005950Cucumber (Chinese Long) v3cmacucB0221
CmaCh12G005950Cucumber (Chinese Long) v3cmacucB0232
CmaCh12G005950Watermelon (97103) v2cmawmbB160
CmaCh12G005950Watermelon (97103) v2cmawmbB183
CmaCh12G005950Watermelon (97103) v2cmawmbB194
CmaCh12G005950Wax gourdcmawgoB0194
CmaCh12G005950Wax gourdcmawgoB0217
CmaCh12G005950Wax gourdcmawgoB0228
CmaCh12G005950Cucurbita maxima (Rimu)cmacmaB033
CmaCh12G005950Cucurbita maxima (Rimu)cmacmaB199
CmaCh12G005950Cucurbita maxima (Rimu)cmacmaB182
CmaCh12G005950Cucurbita maxima (Rimu)cmacmaB186
CmaCh12G005950Cucurbita maxima (Rimu)cmacmaB206
CmaCh12G005950Cucumber (Gy14) v1cgycmaB0224
CmaCh12G005950Cucumber (Gy14) v1cgycmaB0962
CmaCh12G005950Cucumber (Gy14) v1cgycmaB1088
CmaCh12G005950Cucurbita moschata (Rifu)cmacmoB164
CmaCh12G005950Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G005950Cucurbita moschata (Rifu)cmacmoB184
CmaCh12G005950Cucurbita moschata (Rifu)cmacmoB188
CmaCh12G005950Cucurbita moschata (Rifu)cmacmoB199
CmaCh12G005950Cucurbita moschata (Rifu)cmacmoB204
CmaCh12G005950Wild cucumber (PI 183967)cmacpiB175
CmaCh12G005950Wild cucumber (PI 183967)cmacpiB187
CmaCh12G005950Wild cucumber (PI 183967)cmacpiB197
CmaCh12G005950Cucumber (Chinese Long) v2cmacuB174
CmaCh12G005950Cucumber (Chinese Long) v2cmacuB185
CmaCh12G005950Cucumber (Chinese Long) v2cmacuB194
CmaCh12G005950Cucumber (Chinese Long) v2cmacuB201
CmaCh12G005950Melon (DHL92) v3.5.1cmameB184
CmaCh12G005950Melon (DHL92) v3.5.1cmameB156
CmaCh12G005950Melon (DHL92) v3.5.1cmameB182
CmaCh12G005950Watermelon (Charleston Gray)cmawcgB153
CmaCh12G005950Watermelon (Charleston Gray)cmawcgB160
CmaCh12G005950Watermelon (Charleston Gray)cmawcgB169
CmaCh12G005950Watermelon (97103) v1cmawmB148
CmaCh12G005950Watermelon (97103) v1cmawmB159
CmaCh12G005950Watermelon (97103) v1cmawmB166