CmaCh12G004370 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G004370
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDehydration responsive element binding transcription factor
LocationCma_Chr12 : 2284706 .. 2285248 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAATCCAGGAGCCAAGCAACCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCTCAAAAGGGCCTCCTCTTCTGCCCATCCCAGCTCAAGAAAGGGCTGTATGAGAGGCAAAGGAGGCCCTGAAAACGCTTCCTGCACTTACAAAGGTGTCCGTCAAAGAACTTGGGGCAAATGGGTTGCTGAGATTCGTGAGCCTAATCGTGGGGCTCGTCTTTGGCTTGGCACTTTTGATACCTCTCATGATGCTGCCATGGCTTATGACAATGCCGCTCGTCGCCTCTATGGCTCTGACGCCAAGCTCAATCTTCCTTCCTCTGCTGCAGAGCCTGAGAAGTCTGTGGTAAACAATGGCGGGATGGGGTTTGGGGAGGAGGACGAAAATGGTGGGCTTTGGAGGTCCATGAGTATTAGCTTAGATGATTCCATTTGGGTTGATGCAACCATGTCTTTGGATTTCCCTGTGATGGAAGATCAGAGCCTTTTGGCTGCGAATTTGGTGGATGGAAATGGCTGGGACACACTACAATGGTGCTTATGA

mRNA sequence

ATGTTGAATCCAGGAGCCAAGCAACCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCTCAAAAGGGCCTCCTCTTCTGCCCATCCCAGCTCAAGAAAGGGCTGTATGAGAGGCAAAGGAGGCCCTGAAAACGCTTCCTGCACTTACAAAGGTGTCCGTCAAAGAACTTGGGGCAAATGGGTTGCTGAGATTCGTGAGCCTAATCGTGGGGCTCGTCTTTGGCTTGGCACTTTTGATACCTCTCATGATGCTGCCATGGCTTATGACAATGCCGCTCGTCGCCTCTATGGCTCTGACGCCAAGCTCAATCTTCCTTCCTCTGCTGCAGAGCCTGAGAAGTCTGTGGTAAACAATGGCGGGATGGGGTTTGGGGAGGAGGACGAAAATGGTGGGCTTTGGAGGTCCATGAGTATTAGCTTAGATGATTCCATTTGGGTTGATGCAACCATGTCTTTGGATTTCCCTGTGATGGAAGATCAGAGCCTTTTGGCTGCGAATTTGGTGGATGGAAATGGCTGGGACACACTACAATGGTGCTTATGA

Coding sequence (CDS)

ATGTTGAATCCAGGAGCCAAGCAACCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCTCAAAAGGGCCTCCTCTTCTGCCCATCCCAGCTCAAGAAAGGGCTGTATGAGAGGCAAAGGAGGCCCTGAAAACGCTTCCTGCACTTACAAAGGTGTCCGTCAAAGAACTTGGGGCAAATGGGTTGCTGAGATTCGTGAGCCTAATCGTGGGGCTCGTCTTTGGCTTGGCACTTTTGATACCTCTCATGATGCTGCCATGGCTTATGACAATGCCGCTCGTCGCCTCTATGGCTCTGACGCCAAGCTCAATCTTCCTTCCTCTGCTGCAGAGCCTGAGAAGTCTGTGGTAAACAATGGCGGGATGGGGTTTGGGGAGGAGGACGAAAATGGTGGGCTTTGGAGGTCCATGAGTATTAGCTTAGATGATTCCATTTGGGTTGATGCAACCATGTCTTTGGATTTCCCTGTGATGGAAGATCAGAGCCTTTTGGCTGCGAATTTGGTGGATGGAAATGGCTGGGACACACTACAATGGTGCTTATGA

Protein sequence

MLNPGAKQPPPPQQQQQQQLKRASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDNAARRLYGSDAKLNLPSSAAEPEKSVVNNGGMGFGEEDENGGLWRSMSISLDDSIWVDATMSLDFPVMEDQSLLAANLVDGNGWDTLQWCL
Homology
[Close]
BLAST of CmaCh12G004370 vs. Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.0e-38
Identity = 86/154 (55.84%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 30  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYD 89
           SSRKGCMRGKGGP+NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS +AA+AYD
Sbjct: 23  SSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYD 82

Query: 90  NAARRLYGSDAKLNLPSS-------AAEPEKSVV---NNGGMGFGEEDENGG-------- 149
           +AAR+LYG +A LNLP S       A+ P        N GG    + +            
Sbjct: 83  SAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESPCSSNEMSSCG 142

Query: 150 ------LWRSMSISL----DDSIWVDATMSLDFP 156
                  W  +++ L    D SIW +ATMSL FP
Sbjct: 143 RVTEEISWEHINVDLPVMDDSSIWEEATMSLGFP 176

[Close]
BLAST of CmaCh12G004370 vs. Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-31
Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           SRKGCM+GKGGPENA+CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS +AAMAYD 
Sbjct: 16  SRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDE 75

Query: 91  AARRLYGSDAKLNLPSSAAEPEKSVVNNGGMGFGEEDENGGLW 134
           AA++LYG +AKLNL     + ++ VV N  + F       G W
Sbjct: 76  AAKKLYGHEAKLNLVH--PQQQQQVVVNRNLSF--SGHGSGSW 114

[Close]
BLAST of CmaCh12G004370 vs. Swiss-Prot
Match: DRE2C_ORYSJ (Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonica GN=DREB2C PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 68/99 (68.69%), Postives = 76/99 (76.77%), Query Frame = 1 

Query: 13  QQQQQQQLKRASSSAHP--SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRG 72
           QQQQQ      S    P   SRKGCM+GKGGPEN  C ++GVRQRTWGKWVAEIREPNRG
Sbjct: 17  QQQQQNISSSKSRKCCPLRRSRKGCMKGKGGPENQRCPFRGVRQRTWGKWVAEIREPNRG 76

Query: 73  ARLWLGTFDTSHDAAMAYDNAARRLYGSDAKLNLPSSAA 110
           ARLWLGTF+T+ DAA AYD+AAR LYG  A+LNL  +AA
Sbjct: 77  ARLWLGTFNTALDAARAYDSAARALYGDCARLNLLLAAA 115

[Close]
BLAST of CmaCh12G004370 vs. Swiss-Prot
Match: DRE2H_ARATH (Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thaliana GN=DREB2H PE=5 SV=3)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           SRKGCM+GKGGPEN  C Y GVRQRTWGKWVAEIREP RGA+LWLGTF +S++AA+AYD 
Sbjct: 49  SRKGCMKGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDE 108

Query: 91  AARRLYGSDAKLNLP 106
           A++ +YG  A+LNLP
Sbjct: 109 ASKAIYGQSARLNLP 123

[Close]
BLAST of CmaCh12G004370 vs. Swiss-Prot
Match: DRE2C_ARATH (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           SRKGCM+GKGGPEN  C Y+GVRQR WGKWVAEIREP+ GARLWLGTF +S++AA+AYD 
Sbjct: 54  SRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDE 113

Query: 91  AARRLYGSDAKLNLPS----SAAEPEKSVVNNGGMGFGEEDE 129
           AA+ +YG  A+LNLP     S++    + V+     F +E E
Sbjct: 114 AAKAIYGQSARLNLPEITNRSSSTAATATVSGSVTAFSDESE 155

[Close]
BLAST of CmaCh12G004370 vs. TrEMBL
Match: A0A0D2SEG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G110100 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.5e-46
Identity = 110/202 (54.46%), Postives = 128/202 (63.37%), Query Frame = 1 

Query: 21  KRASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 80
           K+A   A  SSRKGCMRGKGGPENA CTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT
Sbjct: 38  KQARKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 97

Query: 81  SHDAAMAYDNAARRLYGSDAKLNL-----------PSSAAEPEKS-VVN----------- 140
           SH+AAMAYD AAR+LYGSDAKLNL           PSSAA P+ + +VN           
Sbjct: 98  SHEAAMAYDAAARKLYGSDAKLNLPELCANNPQSQPSSAANPQMAPMVNYQPQNVSNSVM 157

Query: 141 ------------NGGMGFGEEDENGGLWRSMSIS-----LDDSIWVDATMSLDFPVMEDQ 181
                       N    FG+  E+G      +++     LDDSIW +  MSL+FP+M D 
Sbjct: 158 PSFPNESIDLQGNVDAKFGQITEDGIEGFWENMNANLPLLDDSIWAETAMSLEFPMMGDP 217

[Close]
BLAST of CmaCh12G004370 vs. TrEMBL
Match: A0A0A0LE58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865380 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45
Identity = 98/177 (55.37%), Postives = 121/177 (68.36%), Query Frame = 1 

Query: 27  AHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAM 86
           A  SSRKGCMRGKGGP+NA+CT+KGVRQRTWGKWVAEIREPNRGARLWLGTFDT+H+AA+
Sbjct: 12  AQASSRKGCMRGKGGPDNAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTAHEAAL 71

Query: 87  AYDNAARRLYGSDAKLNLP-SSAAEPEKSVVNNGGMGFGEE------------------- 146
           AYD AAR+LYGS+AKLNLP ++    E   + +GG                         
Sbjct: 72  AYDAAARKLYGSEAKLNLPQTTTTSHELPQLEHGGQSPSNNNIIASPSPTGTTTTVSSSP 131

Query: 147 -DENGGLWRSMSISLDDSIWVDATMSLDFPVME-DQSLLAANLVDGNG-WDTLQWCL 181
            +  GGLW + +++ D+SIW +A MSLDFP++E DQ +      DG G WD LQWC+
Sbjct: 132 IERIGGLWENENVNFDESIWREAVMSLDFPIIENDQGI----FFDGAGSWDALQWCM 184

[Close]
BLAST of CmaCh12G004370 vs. TrEMBL
Match: A0A0D3CWG9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38
Identity = 95/183 (51.91%), Postives = 113/183 (61.75%), Query Frame = 1 

Query: 26  SAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA 85
           + + SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF+TS +AA
Sbjct: 19  TVNASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSREAA 78

Query: 86  MAYDNAARRLYGSDAKLNLPSS------AAEPEKSVVNNGGMGFGEEDENGG-------- 145
           +AYD+AAR+LYG DA LNLP S       A P   V        GE+             
Sbjct: 79  LAYDSAARKLYGPDAHLNLPESLRSYPETASPGTQVSQTPSSNTGEKSSEESPSSSNEMS 138

Query: 146 --------LWRSMSISL----DDSIWVDATMSLDFPVM----EDQSLLAANLVDG-NGWD 178
                    W  M++ L    D SIW +ATMSL FP +    +D SL  + + DG + WD
Sbjct: 139 SWGTRSEISWEHMNVDLPVTDDSSIWEEATMSLGFPWVHEGDDDISLFNSCISDGYSNWD 198

[Close]
BLAST of CmaCh12G004370 vs. TrEMBL
Match: A0A078JYM1_BRANA (BnaCnng69090D protein OS=Brassica napus GN=BnaCnng69090D PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38
Identity = 95/181 (52.49%), Postives = 112/181 (61.88%), Query Frame = 1 

Query: 26  SAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA 85
           + + SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF+TS +AA
Sbjct: 19  TVNASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSREAA 78

Query: 86  MAYDNAARRLYGSDAKLNLPSS------AAEPEKSVVNNGGMGFGEEDENGG-------- 145
           +AYD+AAR+LYG DA LNLP S       A P   V        GE+             
Sbjct: 79  LAYDSAARKLYGPDAHLNLPESLRSYPETASPGTQVSQTPSSNTGEKSSEESPSSSNEMS 138

Query: 146 --------LWRSMSISL----DDSIWVDATMSLDFPVM----EDQSLLAANLVDG-NGWD 176
                    W  M++ L    D SIW +ATMSL FP +    +D SL  + + DG + WD
Sbjct: 139 SWGTRSEISWEHMNVDLPVTDDSSIWQEATMSLGFPWVHEGDDDISLFNSCISDGYSNWD 198

[Close]
BLAST of CmaCh12G004370 vs. TrEMBL
Match: A0A0A0LL46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G363010 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.4e-38
Identity = 98/196 (50.00%), Postives = 115/196 (58.67%), Query Frame = 1 

Query: 30  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYD 89
           SSRKGCMRGKGGPENA CTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA+AYD
Sbjct: 16  SSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYD 75

Query: 90  NAARRLYGSDAKLNLPSSAAEPEKSVVNNGGMGFGEEDENGGLWRSMSISLDD------- 149
           NAARRLYGSDAKLNLP  ++    SV ++      + + N  +  + +   +D       
Sbjct: 76  NAARRLYGSDAKLNLPLISSSISVSVSSSSSTTTSDNNNNNSVVATANTYNNDVNPTVED 135

Query: 150 -----------------------SIWVDAT------------MSLDFP-VMEDQSLLAAN 179
                                   +W   +            MSLDFP +ME Q+  + N
Sbjct: 136 VASSSSLSNNKRFREDEDQEQIGGLWRAMSISLDDSIWVEAAMSLDFPLLMEQQTFFSPN 195

[Close]
BLAST of CmaCh12G004370 vs. TAIR10
Match: AT1G75490.1 (AT1G75490.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 3.4e-39
Identity = 86/154 (55.84%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 30  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYD 89
           SSRKGCMRGKGGP+NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS +AA+AYD
Sbjct: 23  SSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYD 82

Query: 90  NAARRLYGSDAKLNLPSS-------AAEPEKSVV---NNGGMGFGEEDENGG-------- 149
           +AAR+LYG +A LNLP S       A+ P        N GG    + +            
Sbjct: 83  SAARKLYGPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESPCSSNEMSSCG 142

Query: 150 ------LWRSMSISL----DDSIWVDATMSLDFP 156
                  W  +++ L    D SIW +ATMSL FP
Sbjct: 143 RVTEEISWEHINVDLPVMDDSSIWEEATMSLGFP 176

[Close]
BLAST of CmaCh12G004370 vs. TAIR10
Match: AT5G18450.1 (AT5G18450.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 6.2e-33
Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           SRKGCM+GKGGPENA+CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS +AAMAYD 
Sbjct: 16  SRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDE 75

Query: 91  AARRLYGSDAKLNLPSSAAEPEKSVVNNGGMGFGEEDENGGLW 134
           AA++LYG +AKLNL     + ++ VV N  + F       G W
Sbjct: 76  AAKKLYGHEAKLNLVH--PQQQQQVVVNRNLSF--SGHGSGSW 114

[Close]
BLAST of CmaCh12G004370 vs. TAIR10
Match: AT2G40350.1 (AT2G40350.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 6.4e-30
Identity = 55/75 (73.33%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           SRKGCM+GKGGPEN  C Y GVRQRTWGKWVAEIREP RGA+LWLGTF +S++AA+AYD 
Sbjct: 49  SRKGCMKGKGGPENGICDYTGVRQRTWGKWVAEIREPGRGAKLWLGTFSSSYEAALAYDE 108

Query: 91  AARRLYGSDAKLNLP 106
           A++ +YG  A+LNLP
Sbjct: 109 ASKAIYGQSARLNLP 123

[Close]
BLAST of CmaCh12G004370 vs. TAIR10
Match: AT2G40340.1 (AT2G40340.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 8.4e-30
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           SRKGCM+GKGGPEN  C Y+GVRQR WGKWVAEIREP+ GARLWLGTF +S++AA+AYD 
Sbjct: 54  SRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDE 113

Query: 91  AARRLYGSDAKLNLPS----SAAEPEKSVVNNGGMGFGEEDE 129
           AA+ +YG  A+LNLP     S++    + V+     F +E E
Sbjct: 114 AAKAIYGQSARLNLPEITNRSSSTAATATVSGSVTAFSDESE 155

[Close]
BLAST of CmaCh12G004370 vs. TAIR10
Match: AT5G05410.1 (AT5G05410.1 DRE-binding protein 2A)

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-29
Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 1 

Query: 31  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAMAYDN 90
           S+KGCM+GKGGPEN+ C+++GVRQR WGKWVAEIREPNRG+RLWLGTF T+ +AA AYD 
Sbjct: 61  SKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDE 120

Query: 91  AARRLYGSDAKLNLPSSAA 110
           AA+ +YG  A+LN P S A
Sbjct: 121 AAKAMYGPLARLNFPRSDA 139

[Close]
BLAST of CmaCh12G004370 vs. NCBI nr
Match: gi|659133319|ref|XP_008466672.1| (PREDICTED: dehydration-responsive element-binding protein 2D-like [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 101/176 (57.39%), Postives = 122/176 (69.32%), Query Frame = 1 

Query: 27  AHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAM 86
           A  SSRKGCMRGKGGP+NASCT+KGVRQRTWGKWVAEIREPNRGARLWLGTFDT+H+AA+
Sbjct: 12  AQASSRKGCMRGKGGPDNASCTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTAHEAAL 71

Query: 87  AYDNAARRLYGSDAKLNLPSSAAEP-EKSVVNNGG--------------------MGFGE 146
           AYD AAR+LYGS+AKLNLP +   P E   + +GG                    M    
Sbjct: 72  AYDAAARKLYGSEAKLNLPQTTTTPHELPQLEHGGQSPSNNNIIASPSPTSSTTTMSSSP 131

Query: 147 EDENGGLWRSMSISLDDSIWVDATMSLDFPVMEDQSLLAANLVDGNG-WDTLQWCL 181
            +  GGLW + +++ D+SIW +A MSLDFP++ED   +     DG G WDTLQWC+
Sbjct: 132 IERIGGLWENENVNFDESIWREAVMSLDFPIIEDDQGI---FFDGAGSWDTLQWCM 184

[Close]
BLAST of CmaCh12G004370 vs. NCBI nr
Match: gi|823156358|ref|XP_012478107.1| (PREDICTED: dehydration-responsive element-binding protein 2D-like [Gossypium raimondii])

HSP 1 Score: 192.2 bits (487), Expect = 7.9e-46
Identity = 110/202 (54.46%), Postives = 128/202 (63.37%), Query Frame = 1 

Query: 21  KRASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 80
           K+A   A  SSRKGCMRGKGGPENA CTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT
Sbjct: 38  KQARKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 97

Query: 81  SHDAAMAYDNAARRLYGSDAKLNL-----------PSSAAEPEKS-VVN----------- 140
           SH+AAMAYD AAR+LYGSDAKLNL           PSSAA P+ + +VN           
Sbjct: 98  SHEAAMAYDAAARKLYGSDAKLNLPELCANNPQSQPSSAANPQMAPMVNYQPQNVSNSVM 157

Query: 141 ------------NGGMGFGEEDENGGLWRSMSIS-----LDDSIWVDATMSLDFPVMEDQ 181
                       N    FG+  E+G      +++     LDDSIW +  MSL+FP+M D 
Sbjct: 158 PSFPNESIDLQGNVDAKFGQITEDGIEGFWENMNANLPLLDDSIWAETAMSLEFPMMGDP 217

[Close]
BLAST of CmaCh12G004370 vs. NCBI nr
Match: gi|449460277|ref|XP_004147872.1| (PREDICTED: dehydration-responsive element-binding protein 2D-like [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-45
Identity = 98/177 (55.37%), Postives = 121/177 (68.36%), Query Frame = 1 

Query: 27  AHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAM 86
           A  SSRKGCMRGKGGP+NA+CT+KGVRQRTWGKWVAEIREPNRGARLWLGTFDT+H+AA+
Sbjct: 12  AQASSRKGCMRGKGGPDNAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTAHEAAL 71

Query: 87  AYDNAARRLYGSDAKLNLP-SSAAEPEKSVVNNGGMGFGEE------------------- 146
           AYD AAR+LYGS+AKLNLP ++    E   + +GG                         
Sbjct: 72  AYDAAARKLYGSEAKLNLPQTTTTSHELPQLEHGGQSPSNNNIIASPSPTGTTTTVSSSP 131

Query: 147 -DENGGLWRSMSISLDDSIWVDATMSLDFPVME-DQSLLAANLVDGNG-WDTLQWCL 181
            +  GGLW + +++ D+SIW +A MSLDFP++E DQ +      DG G WD LQWC+
Sbjct: 132 IERIGGLWENENVNFDESIWREAVMSLDFPIIENDQGI----FFDGAGSWDALQWCM 184

[Close]
BLAST of CmaCh12G004370 vs. NCBI nr
Match: gi|743851777|ref|XP_011029080.1| (PREDICTED: dehydration-responsive element-binding protein 2D-like [Populus euphratica])

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 105/198 (53.03%), Postives = 127/198 (64.14%), Query Frame = 1 

Query: 21  KRASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 80
           K+    A  SSRKGCMRGKGGPENA CTYKGVRQRTWGKWVAEIREPN GARLWLGT+DT
Sbjct: 16  KQFKKPAQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNCGARLWLGTYDT 75

Query: 81  SHDAAMAYDNAARRLYGSDAKLNLP-------SSAAEPEKS------------------- 140
           SH+AAMAYD AAR+LYG +AKLNLP          A P  S                   
Sbjct: 76  SHEAAMAYDAAARKLYGPEAKLNLPELQVNRSQFPASPANSQVIQMTNQPSLLIQNSIPT 135

Query: 141 VVNNGGMGFGEEDEN----GGLWRSMSISL------DDSIWVDATMSLDFPVMEDQSLLA 181
            V++ GM   E D N    G + +  S +L      +DSIW +A +S++FPVM+D  + A
Sbjct: 136 CVDSNGMEV-ENDANFGRSGDVIKEFSANLNVNMTFNDSIWAEAALSINFPVMDDPGIFA 195

[Close]
BLAST of CmaCh12G004370 vs. NCBI nr
Match: gi|922513738|ref|XP_013592342.1| (PREDICTED: dehydration-responsive element-binding protein 2D-like [Brassica oleracea var. oleracea])

HSP 1 Score: 167.9 bits (424), Expect = 1.6e-38
Identity = 95/183 (51.91%), Postives = 113/183 (61.75%), Query Frame = 1 

Query: 26  SAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAA 85
           + + SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF+TS +AA
Sbjct: 19  TVNASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSREAA 78

Query: 86  MAYDNAARRLYGSDAKLNLPSS------AAEPEKSVVNNGGMGFGEEDENGG-------- 145
           +AYD+AAR+LYG DA LNLP S       A P   V        GE+             
Sbjct: 79  LAYDSAARKLYGPDAHLNLPESLRSYPETASPGTQVSQTPSSNTGEKSSEESPSSSNEMS 138

Query: 146 --------LWRSMSISL----DDSIWVDATMSLDFPVM----EDQSLLAANLVDG-NGWD 178
                    W  M++ L    D SIW +ATMSL FP +    +D SL  + + DG + WD
Sbjct: 139 SWGTRSEISWEHMNVDLPVTDDSSIWEEATMSLGFPWVHEGDDDISLFNSCISDGYSNWD 198

The following BLAST results are available for this feature:
BLAST of CmaCh12G004370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRE2D_ARATH6.0e-3855.84Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DRE... [more]
DRE2G_ARATH1.1e-3165.05Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DRE... [more]
DRE2C_ORYSJ1.8e-2968.69Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonic... [more]
DRE2H_ARATH1.1e-2873.33Putative dehydration-responsive element-binding protein 2H OS=Arabidopsis thalia... [more]
DRE2C_ARATH1.5e-2858.82Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DRE... [more]
BLAST of CmaCh12G004370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2SEG7_GOSRA5.5e-4654.46Uncharacterized protein OS=Gossypium raimondii GN=B456_005G110100 PE=4 SV=1[more]
A0A0A0LE58_CUCSA2.1e-4555.37Uncharacterized protein OS=Cucumis sativus GN=Csa_3G865380 PE=4 SV=1[more]
A0A0D3CWG9_BRAOL1.1e-3851.91Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A078JYM1_BRANA1.4e-3852.49BnaCnng69090D protein OS=Brassica napus GN=BnaCnng69090D PE=4 SV=1[more]
A0A0A0LL46_CUCSA9.4e-3850.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G363010 PE=4 SV=1[more]
BLAST of CmaCh12G004370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75490.13.4e-3955.84 Integrase-type DNA-binding superfamily protein[more]
AT5G18450.16.2e-3365.05 Integrase-type DNA-binding superfamily protein[more]
AT2G40350.16.4e-3073.33 Integrase-type DNA-binding superfamily protein[more]
AT2G40340.18.4e-3058.82 Integrase-type DNA-binding superfamily protein[more]
AT5G05410.14.2e-2969.62 DRE-binding protein 2A[more]
BLAST of CmaCh12G004370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133319|ref|XP_008466672.1|1.1e-4757.39PREDICTED: dehydration-responsive element-binding protein 2D-like [Cucumis melo][more]
gi|823156358|ref|XP_012478107.1|7.9e-4654.46PREDICTED: dehydration-responsive element-binding protein 2D-like [Gossypium rai... [more]
gi|449460277|ref|XP_004147872.1|3.0e-4555.37PREDICTED: dehydration-responsive element-binding protein 2D-like [Cucumis sativ... [more]
gi|743851777|ref|XP_011029080.1|1.5e-4453.03PREDICTED: dehydration-responsive element-binding protein 2D-like [Populus euphr... [more]
gi|922513738|ref|XP_013592342.1|1.6e-3851.91PREDICTED: dehydration-responsive element-binding protein 2D-like [Brassica oler... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G004370.1CmaCh12G004370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 71..87
score: 8.4E-10coord: 49..60
score: 8.4
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 48..107
score: 1.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 48..97
score: 5.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 48..111
score: 9.2
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 48..105
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 48..106
score: 3.07
NoneNo IPR availablePANTHERPTHR31241FAMILY NOT NAMEDcoord: 30..117
score: 3.4
NoneNo IPR availablePANTHERPTHR31241:SF6SUBFAMILY NOT NAMEDcoord: 30..117
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G004370Cucsa.231820Cucumber (Gy14) v1cgycmaB0638
CmaCh12G004370Cucsa.342750Cucumber (Gy14) v1cgycmaB0925
CmaCh12G004370Cla020801Watermelon (97103) v1cmawmB159
CmaCh12G004370Cla022458Watermelon (97103) v1cmawmB148
CmaCh12G004370Csa3G865380Cucumber (Chinese Long) v2cmacuB183
CmaCh12G004370Csa2G363010Cucumber (Chinese Long) v2cmacuB174
CmaCh12G004370MELO3C003785Melon (DHL92) v3.5.1cmameB167
CmaCh12G004370MELO3C010977Melon (DHL92) v3.5.1cmameB156
CmaCh12G004370ClCG05G018640Watermelon (Charleston Gray)cmawcgB160
CmaCh12G004370ClCG08G014650Watermelon (Charleston Gray)cmawcgB169
CmaCh12G004370CSPI02G20500Wild cucumber (PI 183967)cmacpiB175
CmaCh12G004370CSPI03G43100Wild cucumber (PI 183967)cmacpiB185
CmaCh12G004370CmoCh05G002790Cucurbita moschata (Rifu)cmacmoB199
CmaCh12G004370CmoCh12G003880Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G004370CmoCh01G020000Cucurbita moschata (Rifu)cmacmoB183
CmaCh12G004370Lsi04G017100Bottle gourd (USVL1VR-Ls)cmalsiB175
CmaCh12G004370Lsi08G013580Bottle gourd (USVL1VR-Ls)cmalsiB184
CmaCh12G004370Cp4.1LG11g02220Cucurbita pepo (Zucchini)cmacpeB179
CmaCh12G004370Cp4.1LG07g03870Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G004370MELO3C003785.2Melon (DHL92) v3.6.1cmamedB182
CmaCh12G004370MELO3C010977.2Melon (DHL92) v3.6.1cmamedB170
CmaCh12G004370CsaV3_2G029160Cucumber (Chinese Long) v3cmacucB0203
CmaCh12G004370CsaV3_3G045550Cucumber (Chinese Long) v3cmacucB0213
CmaCh12G004370Cla97C08G158170Watermelon (97103) v2cmawmbB194
CmaCh12G004370Cla97C05G099980Watermelon (97103) v2cmawmbB181
CmaCh12G004370Bhi09G001880Wax gourdcmawgoB0230
CmaCh12G004370CsGy2G020200Cucumber (Gy14) v2cgybcmaB179
CmaCh12G004370CsGy3G040680Cucumber (Gy14) v2cgybcmaB303
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G004370CmaCh01G019380Cucurbita maxima (Rimu)cmacmaB182
CmaCh12G004370CmaCh05G002740Cucurbita maxima (Rimu)cmacmaB199
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G004370Silver-seed gourdcarcmaB0135
CmaCh12G004370Silver-seed gourdcarcmaB0249
CmaCh12G004370Silver-seed gourdcarcmaB1292
CmaCh12G004370Silver-seed gourdcarcmaB1349
CmaCh12G004370Cucumber (Chinese Long) v3cmacucB0226
CmaCh12G004370Cucumber (Chinese Long) v3cmacucB0231
CmaCh12G004370Watermelon (97103) v2cmawmbB164
CmaCh12G004370Watermelon (97103) v2cmawmbB177
CmaCh12G004370Wax gourdcmawgoB0208
CmaCh12G004370Wax gourdcmawgoB0218
CmaCh12G004370Wax gourdcmawgoB0225
CmaCh12G004370Cucurbita maxima (Rimu)cmacmaB034
CmaCh12G004370Cucurbita maxima (Rimu)cmacmaB185
CmaCh12G004370Cucurbita maxima (Rimu)cmacmaB205
CmaCh12G004370Cucumber (Gy14) v1cgycmaB0034
CmaCh12G004370Cucurbita moschata (Rifu)cmacmoB165
CmaCh12G004370Wild cucumber (PI 183967)cmacpiB203
CmaCh12G004370Cucumber (Chinese Long) v2cmacuB200
CmaCh12G004370Melon (DHL92) v3.5.1cmameB149
CmaCh12G004370Melon (DHL92) v3.5.1cmameB187
CmaCh12G004370Watermelon (97103) v1cmawmB169
CmaCh12G004370Cucurbita pepo (Zucchini)cmacpeB170
CmaCh12G004370Cucurbita pepo (Zucchini)cmacpeB190
CmaCh12G004370Cucurbita pepo (Zucchini)cmacpeB198
CmaCh12G004370Bottle gourd (USVL1VR-Ls)cmalsiB162
CmaCh12G004370Bottle gourd (USVL1VR-Ls)cmalsiB163
CmaCh12G004370Cucumber (Gy14) v2cgybcmaB721
CmaCh12G004370Cucumber (Gy14) v2cgybcmaB907
CmaCh12G004370Melon (DHL92) v3.6.1cmamedB163
CmaCh12G004370Melon (DHL92) v3.6.1cmamedB204