CmaCh12G002080 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G002080
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNAD(P)H-quinone oxidoreductase subunit H, chloroplastic
LocationCma_Chr12 : 989036 .. 989714 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGACAAATAATAGCCAGATATCTACAATGGAGGATGGCCCATGGAGAATAAAGCCGCCCCATTTTTCTAGTTTATCTATAGATATATATATATATATATATATATATAAGGTTTCAGTTAGCTCATAAATTTTTGAGCAACTGGAAATCCAATTTTGTCCCTTCATATATTGTTTATAGTATATAATAATAATAATAATGTTTGTTTCCTAAGTTCTCAAGTTCAGTTACTTTCATTATTCTCTTGGGAAAAAAAATTAGTATTATCACTAAATACGATTAAATAATATTCTTTTAATATAGTCGACACCAAATCCTTTTTAAAAAGAATGGTAATGTGACTGGGAACAAGAAACAAAGATGCATATAAGATTTTTTTTTTTTTTTTTCCTGTTTTATATATAAATGGAATGCCCTCTTTGAAATAAATTCTCCTAGATAGAGATTTTTTTAAAAAAAAATTATTAGATGAAATCAGTTTAGAGAGATTATCAATTTCATTCATCTCTTTGGACTGTTATATGAAGCCCCCGAAAGGGGATCAAGGTTTTTCTTAGAGATGGAAAATTCGCCCGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAA

mRNA sequence

ATGGAGAAGACAAATAATAGCCAGATATCTACAATGGAGGATGGCCCATGGAGAATAAAGCCGCCCCATTTTTCTAGTTTATCTATAGATATATATATATATATATATATATATAAGTTAGCTCATAAATTTTTGAGCAACTGGAAATCCAATTTTGTCCCTTCATATATTTTTAGAGAGATTATCAATTTCATTCATCTCTTTGGACTGTTATATGAAGCCCCCGAAAGGGGATCAAGGTTTTTCTTAGAGATGGAAAATTCGCCCGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAA

Coding sequence (CDS)

ATGGAGAAGACAAATAATAGCCAGATATCTACAATGGAGGATGGCCCATGGAGAATAAAGCCGCCCCATTTTTCTAGTTTATCTATAGATATATATATATATATATATATATATAAGTTAGCTCATAAATTTTTGAGCAACTGGAAATCCAATTTTGTCCCTTCATATATTTTTAGAGAGATTATCAATTTCATTCATCTCTTTGGACTGTTATATGAAGCCCCCGAAAGGGGATCAAGGTTTTTCTTAGAGATGGAAAATTCGCCCGCCGGGTTTTATCAATTTGCAAATTCTTCCTCAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGCATAGATATCATTATGGGAGAA

Protein sequence

MEKTNNSQISTMEDGPWRIKPPHFSSLSIDIYIYIYIYKLAHKFLSNWKSNFVPSYIFREIINFIHLFGLLYEAPERGSRFFLEMENSPAGFYQFANSSSVKRMKLADIMTILGSIDIIMGE
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh12G002080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh12G002080 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmaCh12G002080 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh12G002080 vs. NCBI nr
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G002080.1CmaCh12G002080.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G002080Silver-seed gourdcarcmaB1140
CmaCh12G002080Cucumber (Chinese Long) v3cmacucB0204
CmaCh12G002080Cucumber (Chinese Long) v3cmacucB0210
CmaCh12G002080Cucumber (Chinese Long) v3cmacucB0222
CmaCh12G002080Watermelon (97103) v2cmawmbB162
CmaCh12G002080Watermelon (97103) v2cmawmbB165
CmaCh12G002080Watermelon (97103) v2cmawmbB166
CmaCh12G002080Watermelon (97103) v2cmawmbB199
CmaCh12G002080Wax gourdcmawgoB0201
CmaCh12G002080Wax gourdcmawgoB0223
CmaCh12G002080Cucurbita maxima (Rimu)cmacmaB035
CmaCh12G002080Cucurbita maxima (Rimu)cmacmaB200
CmaCh12G002080Cucurbita maxima (Rimu)cmacmaB187
CmaCh12G002080Cucurbita maxima (Rimu)cmacmaB194
CmaCh12G002080Cucurbita maxima (Rimu)cmacmaB207
CmaCh12G002080Cucumber (Gy14) v1cgycmaB0223
CmaCh12G002080Cucumber (Gy14) v1cgycmaB0225
CmaCh12G002080Cucumber (Gy14) v1cgycmaB0449
CmaCh12G002080Cucumber (Gy14) v1cgycmaB0856
CmaCh12G002080Cucurbita moschata (Rifu)cmacmoB200
CmaCh12G002080Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G002080Cucurbita moschata (Rifu)cmacmoB187
CmaCh12G002080Cucurbita moschata (Rifu)cmacmoB194
CmaCh12G002080Cucurbita moschata (Rifu)cmacmoB205
CmaCh12G002080Wild cucumber (PI 183967)cmacpiB176
CmaCh12G002080Wild cucumber (PI 183967)cmacpiB182
CmaCh12G002080Wild cucumber (PI 183967)cmacpiB195
CmaCh12G002080Wild cucumber (PI 183967)cmacpiB202
CmaCh12G002080Cucumber (Chinese Long) v2cmacuB176
CmaCh12G002080Cucumber (Chinese Long) v2cmacuB180
CmaCh12G002080Cucumber (Chinese Long) v2cmacuB192
CmaCh12G002080Cucumber (Chinese Long) v2cmacuB199
CmaCh12G002080Melon (DHL92) v3.5.1cmameB158
CmaCh12G002080Melon (DHL92) v3.5.1cmameB170
CmaCh12G002080Melon (DHL92) v3.5.1cmameB185
CmaCh12G002080Melon (DHL92) v3.5.1cmameB186
CmaCh12G002080Watermelon (Charleston Gray)cmawcgB143
CmaCh12G002080Watermelon (Charleston Gray)cmawcgB152
CmaCh12G002080Watermelon (Charleston Gray)cmawcgB155
CmaCh12G002080Watermelon (Charleston Gray)cmawcgB169
CmaCh12G002080Watermelon (Charleston Gray)cmawcgB174
CmaCh12G002080Watermelon (97103) v1cmawmB148
CmaCh12G002080Watermelon (97103) v1cmawmB152
CmaCh12G002080Watermelon (97103) v1cmawmB164
CmaCh12G002080Watermelon (97103) v1cmawmB167
CmaCh12G002080Watermelon (97103) v1cmawmB174
CmaCh12G002080Cucurbita pepo (Zucchini)cmacpeB169
CmaCh12G002080Cucurbita pepo (Zucchini)cmacpeB174
CmaCh12G002080Cucurbita pepo (Zucchini)cmacpeB180
CmaCh12G002080Cucurbita pepo (Zucchini)cmacpeB188
CmaCh12G002080Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G002080Bottle gourd (USVL1VR-Ls)cmalsiB164
CmaCh12G002080Bottle gourd (USVL1VR-Ls)cmalsiB169
CmaCh12G002080Bottle gourd (USVL1VR-Ls)cmalsiB189
CmaCh12G002080Cucumber (Gy14) v2cgybcmaB180
CmaCh12G002080Cucumber (Gy14) v2cgybcmaB301
CmaCh12G002080Cucumber (Gy14) v2cgybcmaB716
CmaCh12G002080Cucumber (Gy14) v2cgybcmaB722
CmaCh12G002080Melon (DHL92) v3.6.1cmamedB172
CmaCh12G002080Melon (DHL92) v3.6.1cmamedB203
CmaCh12G002080Melon (DHL92) v3.6.1cmamedB185
CmaCh12G002080Melon (DHL92) v3.6.1cmamedB201
CmaCh12G002080Silver-seed gourdcarcmaB0074
CmaCh12G002080Silver-seed gourdcarcmaB0078
CmaCh12G002080Silver-seed gourdcarcmaB0556
CmaCh12G002080Silver-seed gourdcarcmaB0558
CmaCh12G002080Silver-seed gourdcarcmaB0892