CmaCh12G001810 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G001810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr12 : 826288 .. 831757 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTAACAAAGAGGCCGTTCCCTCCACAATTCATGGGTGTGCGGATTCGATTGGATGGGGAAGGGATAAACACCCCGCCATTATTATGTAATTCCTTCTCCTTCTTCCTTTCATGGCTTCCTTGCCTTCTGTTACCCTAACTGCTGCTCTCAACCTCGATTCCGACGTAAGAAAGCGACACTCTACCAGCCTTCTCCTCAAGGATAAGGTACTCTTTTTGCTTGCTTTCGATGGAGCCACGATTGATTTGAAATGAAATATTCTTTTGAAAATACTCGAATTGATCTTACGGACTTCTGTTCTTTGTTTGTGAGAAGGATCAGTTGAGTTGGAGTGTGAAACTGTGGATTCTGAATGTTGGATTCTTAATTTGTTCGTAACTAAACGTATGGAATGTGAATTTAGCCTGCTTCGTTTTCTTGATCTGTTGATTCTATGATATACTGTAGAGTGCTAGCGTGTCGTATCAGAAAAATCAGTCACTAATTCAACTGAATGTTGATGCGGAGCCGAAGTTTGTAGACGTACGTGAAGCTCTGTCTCTGTTGAAAGAAGGTACGACGGTCAAAACTTCTTACTATGTTCCGTTGTTGCAAGAATGCGTAGACAGAAAATTAGCTGCAGAAGCGGAAATTATCCATGGTCATATCGTAAAAACTGGAACTCATGAAGACCTATTTGTAATGACAAATCTTGTTAATGTTTATGCGAAATGTGGAGTCGTGGAAAAAGCTCGCAAAGTGTTTGATAATTTGCCTCGAAGAAATGTCGTTGCCTGGACTACTCTAGTGACTGGTTATGTTCAGAACTCGCAGCCTCTGCCTGCTCTTAAAGTATTCATCGAAATGTTGCAGGCTGGAGCTTATCCTACAAATTTTACACTCGGAATAGTGTTGAATGCTTGTTCTTCCCTGCAATCTATCGAATTGGGGAAGCAAGTTCATGCATATATTATCAAATATCACTTAGATTTTGATACTAGTATTGGCAACTCTCTTTCTAGCTTCTATTCTAAATTTGGGTGCTTGGAACTCGCTATCAGGGCCTTCCAGAAAATTAAGGAAAAGAATGTCATTTCATGGACTTCAGTTGTATCTGCCTGTGGTGATAATGGTCAAGCAGCTCGGAGTTTATGTTTCTTTACCAAGATGCTCTCAGAAGGCGTGGAGCCGAATGAATATACTCTCACCAGTGTCTTGAGCACTTGTTGTGTGATGCTAACATTGAGTCTAGGAGCACAAATTCATTCACTAAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTCATGTACTTGTACCTGAAATGTGGATGGCTTATTGAGGCTCAGAAATTGTTCGAAGGTATGGAGACCCTCAATTTGATTACATGGAATTCAATGATTGCAGGGCATGCAAAAATGATGGATGCTGCTGAAGATGATCTTGCAGCTCACAAGAGTGGATCCACAGCACTTAATATGTTCCAGAAATTACATCACTCGGGTATAAAGCCCGATCTGTTCACTTTCTCCAGTGTTTTAAGCGTTTGTAGTAGACTAGTAGCCTTAGAACAAGGGGAACAAACTCATGCTCAGATCATCAAGAGTGGTGTTTTGGCAGATATTGTTGTGGGAACTGCATTGATTAGTATGTATAACAAATGTGGAAGTATTTCTGAGGCAAGAAAAGCTTTCTTGGAGATGCCTTCAAGAACTCTGATATCATGGACTTCGATGATTACAGGATTTGCACGACACGGTTTGTCTCAACAAGCACTTCAGCTCTTTGAAGATATGAGACTGGCTGGAGTTAAACCAAACCAGATCACTTTTGTAGGTGTTCTATCAGCTTGTAGCCATGCTGGTTTGGTGGATGAAGCACTGTATTACTTTGAAGTAATGCAGAAGCAGTGCAGGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGATGAACTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCAGGATGTCGAAGTCATGGGAACTCCGAATTGGGGTTTTATGCTGCTGAGCAGTTACTCAAACTCAGGCCGAAAGACACCGAGTCCTACATCTCTCTGCTAAATATGTACATCTCTGCAGGGAGATGGAAGGATGTTTCCACAGTGAGAAAATTAATGAAAGAAGAAAAGGTTGGAAAGTTGAAGGACTGGAGCTGGATTAGCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACTGTCAAACTGCAGAGATGTACAAGCTGTTGGAGACTTTACTCGACGAAGTAAAACCTCTTGGTTACGAACCTGTTCAATATATGGAGGTAATCGAAGAGGAGAAAGGCGATGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAGAAGTTAGCCGTTGCTTTTGGTTTGTTGAACCTGCCAAAAGCCACCCAGATTCGGGTTGTCAAGAACATCACCATGTGTAGGGACTGCCATAATTTTATCCGATTCGTATCATTATTGACAGGCAGGGAAATCGTCATCCGAGATAGCAAACAGCTTCACAAGTTTTCGAACGGATACTGTTCTTGTGGAGGTTTTGGAGATCTTCTTTAGTGTCCTTGGTGAAGAGCAGGGTAAGACACGAACTTAAATTTTGTACAAACCTAGCGACATTGAGCTGTCTAAATATTCATATGAAGCTGATTTCTGTTGAGCTTCAGGCAAATACCAGGACAATTTAATGTCAACACCATTGTTCCTTCTCTGTATAGCGAAAGAATGACAAGAGGTAGGTCAGCTAATTTGCTAAGAGATTTTAACAAAACTAGATGATGGTAGTATATACAGGTACTCTTATACAAATTTCCAGCCTTAGATGATGCCGTTTCCAGCCTTGATGCACACAAAATCAGCGTCTTTTAGTCTTGTTCTTGGCGGTTCTTGATTTGCTGGTGTCAATTGAAGGTTTCAATATCTCAAACAGTGTAATGAGATAATTTTGGACGGGAACCGGGAGAAAATGTGGTACATGTTATGAACCACAAATCTCTTCAATAGTATGATATTGTCCACTTTGAGCATAAGCCCACATGACTTTGCTTTTAGTTTTTAGTTTTCCCAAAAGGCCTTGTAGTAATGGAAATATATTCCTTACTTATAAATTCATAATCATCTCTTTAATTAGCCGATGCGGAACTCCCCACCAACAATCCTCAACTGTATACTCGCTGATGTCAATTGACATTCGACAACTATACGCAATGTGAAAAATCTACTATGACCCATCTTAAGGTACTCACTGGTTTCCCCAGGTGATTTCTGAATGTCCACCATCAAGAACGTGGGAGCAACTTTGAAATTCTACAGGAAAATATTTCAGATCAAGGTCGAAGAACAGGAAATGGAAATGGAAACATAATTGCATAATAACTGAGAAATAAGAAGTCTTTGCTCGCTGATGGGCCTTCTACTCTCATCTGGCATTCATCAGAAGCTTAGTTAAGATTATAATACAGTGGGGCCTGCCTTATTCCTAGAGGGTGGATAGCCAGATAGAATGACAAGATTTCAGGTGAGAACTTCAAAATGATTACCTTGTAATTGCTAATGTGTTGTCTTGAAACCCATTGATTTAGCTACAGCTTCCATAGTTGATAATAAAACCTGTGGGCTTTTGGCAGGCAAAGCGTGTCGGGTGCTTCGTCGTATCCTGCCGTAATCCAAAGAAATTTAACCTTCAAGACGAGGTACACATACTAAACTTTCTTATACCACCATTTTAAAATCGAAGCATGATATAGTCCGTCTAAGATAAAGGATTATATATAGTTAATGATGAGTTATGATCATGTTAGTTAGCGAAAAGTCTTTAATATGATAGGTAAATTGGCTTTCTCTAACCTTCAAATCTTGACAAGGTACGCATGCTAAACTTTCTTATACCAACATATTTTTAAATGATCTAAGCATGATATAGTCAGAGATAATGGTTATATATGATTAATGATGAGTTATGATCATGTTAGTAAGTGAGACTCTTTAATATGATAGGTAAATTGGCTCGCTCTAATTCTATGTTAAATCACCATTAATGAGCATTATGGTAAGTTAATCTAATATTAATTCTTGAAAACTTGTGGGATAACGCAATACTTCTAACTAAAATTGATGTTTGAAAAGTTGACGAGCAAGAACGAAAAAATGTTTCGAAAAACACTTTATTTTCCCTTTCTATAGGTGTTCCATACTTCCTCACCATACTTTTGCTTAGTTTACGATCCTTTGAAAAAAATTTAATGTAGTTATAGATTTTATGATTTTAGGGGATTTTTTTTAATTCTACCTTAATTGGAGAGAGAAACAAAACATTGCTTATAAATTGTGAAAATCTCTGTCAGCAGCCTTGCACGATTTTATAGAAATTTGACTGGAGTTCTGTAAGCTCGGGAGGAAAACAAAAGTAAGTGCTACTTTTGGAAGAAGGGAATAAAAGTGGGGAACTTCTAAAACCACTTTTCGTTATTTAATATATTCCCACAAAAGTTTTGAGATGCTTGTAAAAGAGCTTAAAACATAAGCTAATGTTCTATTTTTCTATCAAAATAATACTTTTTTAATCAACTTACTTTACCATGAAGGAAAAGTCTACTTATTTTAAATCACAAAAGTATAGAACTAAATCAAATATAAAGACAAGACGAACACGACTCCCTTCAATAGTATAATATTGTCTATTTTGAGCATATGCTTTCATGACTCCATGACTTTGCTTTGGACTTCTCCAAAAGACCTTATACTAATGGAGAGAGTATTCTTTGTTTATAAACCTATGATCATTCCTTAAATTAGTCGATGTGAGCGATGATGAAAGTCTCACATCGGCTAATTTAGGGAATGATCATGAGTTTATAATCCCACATCGGCTAATTTTGGAATGATCATGAGTTTATAAATAAAGAATACTCTCTCCATTGGTACGAGACTTTTTGGGGAAACCTAAAGCAAAGCCATGAGAGCTTATGCTAAAAGTGGAGAATATCAATCATTGTAACATCGGCTAATTTAGGGAATGATCATGAGTTTATAAACAAAAAATACTCTCTCCATTGGTATGAGTTTATAAACAAAGAATACTCTCTCCATTGGTACGAGACTTTTTGGGGAAGCTTAAAGCAAAGCTATGAAAGCTTATGCTTAAAGTGGAGAATATCAACCATTGTGGAGAGTTGTGTGTTCGTCAAACCGATAAAACTTTAACCTTTTAAAACTTTTGAGAATCGATCCTAATTTAGAAGTAATAGGAGGGCTAGAATAAAATTGCTCAAATCTATCCATTAAAATTCTTTTTTTTTTTACTATTATCTTAAACAAAATAATAATAATAAAACGTGTTTATCCTCTTCATAATCCCTATATATATGTATGTATATATGGAA

mRNA sequence

AAGTAACAAAGAGGCCGTTCCCTCCACAATTCATGGGTGTGCGGATTCGATTGGATGGGGAAGGGATAAACACCCCGCCATTATTATGTAATTCCTTCTCCTTCTTCCTTTCATGGCTTCCTTGCCTTCTGTTACCCTAACTGCTGCTCTCAACCTCGATTCCGACGTAAGAAAGCGACACTCTACCAGCCTTCTCCTCAAGGATAAGAGTGCTAGCGTGTCGTATCAGAAAAATCAGTCACTAATTCAACTGAATGTTGATGCGGAGCCGAAGTTTGTAGACGTACGTGAAGCTCTGTCTCTGTTGAAAGAAGGTACGACGGTCAAAACTTCTTACTATGTTCCGTTGTTGCAAGAATGCGTAGACAGAAAATTAGCTGCAGAAGCGGAAATTATCCATGGTCATATCGTAAAAACTGGAACTCATGAAGACCTATTTGTAATGACAAATCTTGTTAATGTTTATGCGAAATGTGGAGTCGTGGAAAAAGCTCGCAAAGTGTTTGATAATTTGCCTCGAAGAAATGTCGTTGCCTGGACTACTCTAGTGACTGGTTATGTTCAGAACTCGCAGCCTCTGCCTGCTCTTAAAGTATTCATCGAAATGTTGCAGGCTGGAGCTTATCCTACAAATTTTACACTCGGAATAGTGTTGAATGCTTGTTCTTCCCTGCAATCTATCGAATTGGGGAAGCAAGTTCATGCATATATTATCAAATATCACTTAGATTTTGATACTAGTATTGGCAACTCTCTTTCTAGCTTCTATTCTAAATTTGGGTGCTTGGAACTCGCTATCAGGGCCTTCCAGAAAATTAAGGAAAAGAATGTCATTTCATGGACTTCAGTTGTATCTGCCTGTGGTGATAATGGTCAAGCAGCTCGGAGTTTATGTTTCTTTACCAAGATGCTCTCAGAAGGCGTGGAGCCGAATGAATATACTCTCACCAGTGTCTTGAGCACTTGTTGTGTGATGCTAACATTGAGTCTAGGAGCACAAATTCATTCACTAAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTCATGTACTTGTACCTGAAATGTGGATGGCTTATTGAGGCTCAGAAATTGTTCGAAGGTATGGAGACCCTCAATTTGATTACATGGAATTCAATGATTGCAGGGCATGCAAAAATGATGGATGCTGCTGAAGATGATCTTGCAGCTCACAAGAGTGGATCCACAGCACTTAATATGTTCCAGAAATTACATCACTCGGGTATAAAGCCCGATCTGTTCACTTTCTCCAGTGTTTTAAGCGTTTGTAGTAGACTAGTAGCCTTAGAACAAGGGGAACAAACTCATGCTCAGATCATCAAGAGTGGTGTTTTGGCAGATATTGTTGTGGGAACTGCATTGATTAGTATGTATAACAAATGTGGAAGTATTTCTGAGGCAAGAAAAGCTTTCTTGGAGATGCCTTCAAGAACTCTGATATCATGGACTTCGATGATTACAGGATTTGCACGACACGGTTTGTCTCAACAAGCACTTCAGCTCTTTGAAGATATGAGACTGGCTGGAGTTAAACCAAACCAGATCACTTTTGTAGGTGTTCTATCAGCTTGTAGCCATGCTGGTTTGGTGGATGAAGCACTGTATTACTTTGAAGTAATGCAGAAGCAGTGCAGGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGATGAACTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCAGGATGTCGAAGTCATGGGAACTCCGAATTGGGGTTTTATGCTGCTGAGCAGTTACTCAAACTCAGGCCGAAAGACACCGAGTCCTACATCTCTCTGCTAAATATGTACATCTCTGCAGGGAGATGGAAGGATGTTTCCACAGTGAGAAAATTAATGAAAGAAGAAAAGGTTGGAAAGTTGAAGGACTGGAGCTGGATTAGCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACTGTCAAACTGCAGAGATGTACAAGCTGTTGGAGACTTTACTCGACGAAGTAAAACCTCTTGGTTACGAACCTGTTCAATATATGGAGGTAATCGAAGAGGAGAAAGGCGATGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAGAAGTTAGCCGTTGCTTTTGGTTTGTTGAACCTGCCAAAAGCCACCCAGATTCGGGTTGTCAAGAACATCACCATGTGTAGGGACTGCCATAATTTTATCCGATTCGTATCATTATTGACAGGCAGGGAAATCGTCATCCGAGATAGCAAACAGCTTCACAAGTTTTCGAACGGATACTGTTCTTGTGGAGGTTTTGGAGATCTTCTTTAGTGTCCTTGGTGAAGAGCAGGGTAAGACACGAACTTAAATTTTGTACAAACCTAGCGACATTGAGCTGTCTAAATATTCATATGAAGCTGATTTCTGTTGAGCTTCAGGCAAATACCAGGACAATTTAATGTCAACACCATTGTTCCTTCTCTGTATAGCGAAAGAATGACAAGAGGTAGGTCAGCTAATTTGCTAAGAGATTTTAACAAAACTAGATGATGGTAGTATATACAGGTACTCTTATACAAATTTCCAGCCTTAGATGATGCCGTTTCCAGCCTTGATGCACACAAAATCAGCGTCTTTTAGTCTTGTTCTTGGCGGTTCTTGATTTGCTGGTGTCAATTGAAGGTTTCAATATCTCAAACAGTGTAATGAGATAATTTTGGACGGGAACCGGGAGAAAATGTGGTACATGTTATGAACCACAAATCTCTTCAATAGTATGATATTGTCCACTTTGAGCATAAGCCCACATGACTTTGCTTTTAGTTTTTAGTTTTCCCAAAAGGCCTTGTAGTAATGGAAATATATTCCTTACTTATAAATTCATAATCATCTCTTTAATTAGCCGATGCGGAACTCCCCACCAACAATCCTCAACTGTATACTCGCTGATGTCAATTGACATTCGACAACTATACGCAATGTGAAAAATCTACTATGACCCATCTTAAGGTACTCACTGGTTTCCCCAGGTGATTTCTGAATGTCCACCATCAAGAACGTGGGAGCAACTTTGAAATTCTACAGGAAAATATTTCAGATCAAGGTCGAAGAACAGGAAATGGAAATGGAAACATAATTGCATAATAACTGAGAAATAAGAAGTCTTTGCTCGCTGATGGGCCTTCTACTCTCATCTGGCATTCATCAGAAGCTTAGTTAAGATTATAATACAGTGGGGCCTGCCTTATTCCTAGAGGGTGGATAGCCAGATAGAATGACAAGATTTCAGGCAAAGCGTGTCGGGTGCTTCGTCGTATCCTGCCGTAATCCAAAGAAATTTAACCTTCAAGACGAGGTAAATTGGCTTTCTCTAACCTTCAAATCTTGACAAGGTACGCATGCTAAACTTTCTTATACCAACATATTTTTAAATGATCTAAGCATGATATAGTCAGAGATAATGGTTATATATGATTAATGATGAGTTATGATCATGTTAGTAAGTGAGACTCTTTAATATGATAGGTAAATTGGCTCGCTCTAATTCTATGTTAAATCACCATTAATGAGCATTATGGTAAGTTAATCTAATATTAATTCTTGAAAACTTGTGGGATAACGCAATACTTCTAACTAAAATTGATGTTTGAAAAGTTGACGAGCAAGAACGAAAAAATGTTTCGAAAAACACTTTATTTTCCCTTTCTATAGGTGTTCCATACTTCCTCACCATACTTTTGCTTAGTTTACGATCCTTTGAAAAAAATTTAATGTAGTTATAGATTTTATGATTTTAGGGGATTTTTTTTAATTCTACCTTAATTGGAGAGAGAAACAAAACATTGCTTATAAATTGTGAAAATCTCTGTCAGCAGCCTTGCACGATTTTATAGAAATTTGACTGGAGTTCTGTAAGCTCGGGAGGAAAACAAAAGTAAGTGCTACTTTTGGAAGAAGGGAATAAAAGTGGGGAACTTCTAAAACCACTTTTCGTTATTTAATATATTCCCACAAAAGTTTTGAGATGCTTGTAAAAGAGCTTAAAACATAAGCTAATGTTCTATTTTTCTATCAAAATAATACTTTTTTAATCAACTTACTTTACCATGAAGGAAAAGTCTACTTATTTTAAATCACAAAAGTATAGAACTAAATCAAATATAAAGACAAGACGAACACGACTCCCTTCAATAGTATAATATTGTCTATTTTGAGCATATGCTTTCATGACTCCATGACTTTGCTTTGGACTTCTCCAAAAGACCTTATACTAATGGAGAGAGTATTCTTTGTTTATAAACCTATGATCATTCCTTAAATTAGTCGATGTGAGCGATGATGAAAGTCTCACATCGGCTAATTTAGGGAATGATCATGAGTTTATAATCCCACATCGGCTAATTTTGGAATGATCATGAGTTTATAAATAAAGAATACTCTCTCCATTGGTACGAGACTTTTTGGGGAAACCTAAAGCAAAGCCATGAGAGCTTATGCTAAAAGTGGAGAATATCAATCATTGTAACATCGGCTAATTTAGGGAATGATCATGAGTTTATAAACAAAAAATACTCTCTCCATTGGTATGAGTTTATAAACAAAGAATACTCTCTCCATTGGTACGAGACTTTTTGGGGAAGCTTAAAGCAAAGCTATGAAAGCTTATGCTTAAAGTGGAGAATATCAACCATTGTGGAGAGTTGTGTGTTCGTCAAACCGATAAAACTTTAACCTTTTAAAACTTTTGAGAATCGATCCTAATTTAGAAGTAATAGGAGGGCTAGAATAAAATTGCTCAAATCTATCCATTAAAATTCTTTTTTTTTTTACTATTATCTTAAACAAAATAATAATAATAAAACGTGTTTATCCTCTTCATAATCCCTATATATATGTATGTATATATGGAA

Coding sequence (CDS)

ATGGCTTCCTTGCCTTCTGTTACCCTAACTGCTGCTCTCAACCTCGATTCCGACGTAAGAAAGCGACACTCTACCAGCCTTCTCCTCAAGGATAAGAGTGCTAGCGTGTCGTATCAGAAAAATCAGTCACTAATTCAACTGAATGTTGATGCGGAGCCGAAGTTTGTAGACGTACGTGAAGCTCTGTCTCTGTTGAAAGAAGGTACGACGGTCAAAACTTCTTACTATGTTCCGTTGTTGCAAGAATGCGTAGACAGAAAATTAGCTGCAGAAGCGGAAATTATCCATGGTCATATCGTAAAAACTGGAACTCATGAAGACCTATTTGTAATGACAAATCTTGTTAATGTTTATGCGAAATGTGGAGTCGTGGAAAAAGCTCGCAAAGTGTTTGATAATTTGCCTCGAAGAAATGTCGTTGCCTGGACTACTCTAGTGACTGGTTATGTTCAGAACTCGCAGCCTCTGCCTGCTCTTAAAGTATTCATCGAAATGTTGCAGGCTGGAGCTTATCCTACAAATTTTACACTCGGAATAGTGTTGAATGCTTGTTCTTCCCTGCAATCTATCGAATTGGGGAAGCAAGTTCATGCATATATTATCAAATATCACTTAGATTTTGATACTAGTATTGGCAACTCTCTTTCTAGCTTCTATTCTAAATTTGGGTGCTTGGAACTCGCTATCAGGGCCTTCCAGAAAATTAAGGAAAAGAATGTCATTTCATGGACTTCAGTTGTATCTGCCTGTGGTGATAATGGTCAAGCAGCTCGGAGTTTATGTTTCTTTACCAAGATGCTCTCAGAAGGCGTGGAGCCGAATGAATATACTCTCACCAGTGTCTTGAGCACTTGTTGTGTGATGCTAACATTGAGTCTAGGAGCACAAATTCATTCACTAAGCATTAAGCTTGGTTATGGTTCAAGCATACCTATAAAAAATTCTGTCATGTACTTGTACCTGAAATGTGGATGGCTTATTGAGGCTCAGAAATTGTTCGAAGGTATGGAGACCCTCAATTTGATTACATGGAATTCAATGATTGCAGGGCATGCAAAAATGATGGATGCTGCTGAAGATGATCTTGCAGCTCACAAGAGTGGATCCACAGCACTTAATATGTTCCAGAAATTACATCACTCGGGTATAAAGCCCGATCTGTTCACTTTCTCCAGTGTTTTAAGCGTTTGTAGTAGACTAGTAGCCTTAGAACAAGGGGAACAAACTCATGCTCAGATCATCAAGAGTGGTGTTTTGGCAGATATTGTTGTGGGAACTGCATTGATTAGTATGTATAACAAATGTGGAAGTATTTCTGAGGCAAGAAAAGCTTTCTTGGAGATGCCTTCAAGAACTCTGATATCATGGACTTCGATGATTACAGGATTTGCACGACACGGTTTGTCTCAACAAGCACTTCAGCTCTTTGAAGATATGAGACTGGCTGGAGTTAAACCAAACCAGATCACTTTTGTAGGTGTTCTATCAGCTTGTAGCCATGCTGGTTTGGTGGATGAAGCACTGTATTACTTTGAAGTAATGCAGAAGCAGTGCAGGATTGAGCCTGTAATGGACCATTTTGCATGCATGATTGACATGTATATGAGGTTGGGTCGGGTGGAAGAAGCTTTTGATGTAGTCAAGAAGATGAACTTTGAGCCTAATGAAATTATATGGTCCATGTTAATTGCAGGATGTCGAAGTCATGGGAACTCCGAATTGGGGTTTTATGCTGCTGAGCAGTTACTCAAACTCAGGCCGAAAGACACCGAGTCCTACATCTCTCTGCTAAATATGTACATCTCTGCAGGGAGATGGAAGGATGTTTCCACAGTGAGAAAATTAATGAAAGAAGAAAAGGTTGGAAAGTTGAAGGACTGGAGCTGGATTAGCATCAAAGAAAAAGTTTATTCATTTAAACCCAATGACAAATCACACTGTCAAACTGCAGAGATGTACAAGCTGTTGGAGACTTTACTCGACGAAGTAAAACCTCTTGGTTACGAACCTGTTCAATATATGGAGGTAATCGAAGAGGAGAAAGGCGATGAAACAGTGTTCTCGTCCACCATTTATCACAGCGAGAAGTTAGCCGTTGCTTTTGGTTTGTTGAACCTGCCAAAAGCCACCCAGATTCGGGTTGTCAAGAACATCACCATGTGTAGGGACTGCCATAATTTTATCCGATTCGTATCATTATTGACAGGCAGGGAAATCGTCATCCGAGATAGCAAACAGCTTCACAAGTTTTCGAACGGATACTGTTCTTGTGGAGGTTTTGGAGATCTTCTTTAG

Protein sequence

MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVREALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL
Homology
[Close]
BLAST of CmaCh12G001810 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-134
Identity = 253/682 (37.10%), Postives = 390/682 (57.18%), Query Frame = 1 

Query: 79  LLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVVEKARKVFDNLPRRN 138
           LL+ C D       + IHG +VK+G   DLF MT L N+YAKC  V +ARKVFD +P R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200

Query: 139 VVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHA 198
           +V+W T+V GY QN     AL++   M +    P+  T+  VL A S+L+ I +GK++H 
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260

Query: 199 YIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAAR 258
           Y ++   D   +I  +L   Y+K G LE A + F  + E+NV+SW S++ A   N     
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 259 SLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKNSVMY 318
           ++  F KML EGV+P + ++   L  C  +  L  G  IH LS++LG   ++ + NS++ 
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380

Query: 319 LYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNMFQKL 378
           +Y KC  +  A  +F  +++  L++WN+MI G A+     +           ALN F ++
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID-----------ALNYFSQM 440

Query: 379 HHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLADIVVGTALISMYNKCGSI 438
               +KPD FT+ SV++  + L      +  H  +++S +  ++ V TAL+ MY KCG+I
Sbjct: 441 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 500

Query: 439 SEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGVKPNQITFVGVLSAC 498
             AR  F  M  R + +W +MI G+  HG  + AL+LFE+M+   +KPN +TF+ V+SAC
Sbjct: 501 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 560

Query: 499 SHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEII 558
           SH+GLV+  L  F +M++   IE  MDH+  M+D+  R GR+ EA+D + +M  +P   +
Sbjct: 561 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 620

Query: 559 WSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRKLMKE 618
           +  ++  C+ H N      AAE+L +L P D   ++ L N+Y +A  W+ V  VR  M  
Sbjct: 621 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 680

Query: 619 EKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE 678
           + + K    S + IK +V+SF     +H  + ++Y  LE L+  +K  GY P   + +  
Sbjct: 681 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV 740

Query: 679 EEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMCRDCHNFIRFVSLLTGRE 738
           E    E + S+   HSEKLA++FGLLN    T I V KN+ +C DCHN  +++SL+TGRE
Sbjct: 741 ENDVKEQLLST---HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 800

Query: 739 IVIRDSKQLHKFSNGYCSCGGF 761
           IV+RD ++ H F NG CSCG +
Sbjct: 801 IVVRDMQRFHHFKNGACSCGDY 808

[Close]
BLAST of CmaCh12G001810 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 2.9e-134
Identity = 249/703 (35.42%), Postives = 414/703 (58.89%), Query Frame = 1 

Query: 62  LSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKC 121
           + +  EGT   +  +   L    +  +      +H  +VK G  + + V  +L+N+Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242

Query: 122 GVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVL 181
           G V KAR +FD    ++VV W ++++GY  N   L AL +F  M       +  +   V+
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302

Query: 182 NACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIK-EKNV 241
             C++L+ +   +Q+H  ++KY   FD +I  +L   YSK   +  A+R F++I    NV
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362

Query: 242 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 301
           +SWT+++S    N     ++  F++M  +GV PNE+T + +L+     L +   +++H+ 
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQ 422

Query: 302 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 361
            +K  Y  S  +  +++  Y+K G + EA K+F G++  +++ W++M+AG+A+  +    
Sbjct: 423 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET--- 482

Query: 362 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRL-VALEQGEQTHAQIIKSGVL 421
                     A+ MF +L   GIKP+ FTFSS+L+VC+    ++ QG+Q H   IKS + 
Sbjct: 483 --------EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 542

Query: 422 ADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 481
           + + V +AL++MY K G+I  A + F     + L+SW SMI+G+A+HG + +AL +F++M
Sbjct: 543 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 602

Query: 482 RLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGR 541
           +   VK + +TF+GV +AC+HAGLV+E   YF++M + C+I P  +H +CM+D+Y R G+
Sbjct: 603 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 662

Query: 542 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNM 601
           +E+A  V++ M       IW  ++A CR H  +ELG  AAE+++ ++P+D+ +Y+ L NM
Sbjct: 663 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 722

Query: 602 YISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETL 661
           Y  +G W++ + VRKLM E  V K   +SWI +K K YSF   D+SH    ++Y  LE L
Sbjct: 723 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 782

Query: 662 LDEVKPLGYEP-VQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNI 721
              +K LGYEP   Y+    +++  E V +    HSE+LA+AFGL+  PK + + ++KN+
Sbjct: 783 STRLKDLGYEPDTSYVLQDIDDEHKEAVLAQ---HSERLAIAFGLIATPKGSPLLIIKNL 842

Query: 722 TMCRDCHNFIRFVSLLTGREIVIRDSKQLHKF-SNGYCSCGGF 761
            +C DCH  I+ ++ +  REIV+RDS + H F S+G CSCG F
Sbjct: 843 RVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867

[Close]
BLAST of CmaCh12G001810 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 9.8e-130
Identity = 244/712 (34.27%), Postives = 417/712 (58.57%), Query Frame = 1 

Query: 58  VREALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHE-DLFVMTNLVN 117
           ++  +  L+ G       Y  +++ C +        +  G ++KTG  E D+ V  +L++
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210

Query: 118 VYAKC-GVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNF 177
           ++ K     E A KVFD +   NVV WT ++T  +Q   P  A++ F++M+ +G     F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 178 TLGIVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKF---GCLELAIRAF 237
           TL  V +AC+ L+++ LGKQ+H++ I+  L  D     SL   Y+K    G ++   + F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVF 330

Query: 238 QKIKEKNVISWTSVVSACGDN-GQAARSLCFFTKMLSEG-VEPNEYTLTSVLSTCCVMLT 297
            ++++ +V+SWT++++    N   A  ++  F++M+++G VEPN +T +S    C  +  
Sbjct: 331 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 390

Query: 298 LSLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAG 357
             +G Q+   + K G  S+  + NSV+ +++K   + +AQ+ FE +   NL+++N+ + G
Sbjct: 391 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 450

Query: 358 HAKMMDAAEDDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTH 417
             + ++  +           A  +  ++    +    FTF+S+LS  + + ++ +GEQ H
Sbjct: 451 TCRNLNFEQ-----------AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 510

Query: 418 AQIIKSGVLADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQ 477
           +Q++K G+  +  V  ALISMY+KCGSI  A + F  M +R +ISWTSMITGFA+HG + 
Sbjct: 511 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 570

Query: 478 QALQLFEDMRLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACM 537
           + L+ F  M   GVKPN++T+V +LSACSH GLV E   +F  M +  +I+P M+H+ACM
Sbjct: 571 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 630

Query: 538 IDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDT 597
           +D+  R G + +AF+ +  M F+ + ++W   +  CR H N+ELG  AA ++L+L P + 
Sbjct: 631 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 690

Query: 598 ESYISLLNMYISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTA 657
            +YI L N+Y  AG+W++ + +R+ MKE  + K    SWI + +K++ F   D +H    
Sbjct: 691 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 750

Query: 658 EMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIY-HSEKLAVAFGLLNLPK 717
           ++Y  L+ L+ E+K  GY P   + + + EE+ DE      +Y HSEK+AVAFGL++  K
Sbjct: 751 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 810

Query: 718 ATQIRVVKNITMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGF 761
           +  +RV KN+ +C DCHN ++++S ++GREIV+RD  + H F +G CSC  +
Sbjct: 811 SRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDY 849

[Close]
BLAST of CmaCh12G001810 vs. Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.4e-128
Identity = 234/688 (34.01%), Postives = 407/688 (59.16%), Query Frame = 1 

Query: 76  YVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVVEKARKVFDNLP 135
           ++ +L   V     A  + +H   +K G    L V  +L+N+Y K      AR VFDN+ 
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377

Query: 136 RRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSL-QSIELGK 195
            R++++W +++ G  QN   + A+ +F+++L+ G  P  +T+  VL A SSL + + L K
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437

Query: 196 QVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNG 255
           QVH + IK +   D+ +  +L   YS+  C++ A   F++    ++++W ++++    + 
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSH 497

Query: 256 QAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKN 315
              ++L  F  M  +G   +++TL +V  TC  +  ++ G Q+H+ +IK GY   + + +
Sbjct: 498 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 557

Query: 316 SVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNM 375
            ++ +Y+KCG +  AQ  F+ +   + + W +MI+G    ++  E++ A H        +
Sbjct: 558 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG---CIENGEEERAFH--------V 617

Query: 376 FQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLADIVVGTALISMYNK 435
           F ++   G+ PD FT +++    S L ALEQG Q HA  +K     D  VGT+L+ MY K
Sbjct: 618 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 677

Query: 436 CGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGVKPNQITFVGV 495
           CGSI +A   F  +    + +W +M+ G A+HG  ++ LQLF+ M+  G+KP+++TF+GV
Sbjct: 678 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 737

Query: 496 LSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEP 555
           LSACSH+GLV EA  +   M     I+P ++H++C+ D   R G V++A ++++ M+ E 
Sbjct: 738 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 797

Query: 556 NEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRK 615
           +  ++  L+A CR  G++E G   A +LL+L P D+ +Y+ L NMY +A +W ++   R 
Sbjct: 798 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 857

Query: 616 LMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYM 675
           +MK  KV K   +SWI +K K++ F  +D+S+ QT  +Y+ ++ ++ ++K  GY P    
Sbjct: 858 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDF 917

Query: 676 EV--IEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMCRDCHNFIRFVS 735
            +  +EEE+ +  ++    YHSEKLAVAFGLL+ P +T IRV+KN+ +C DCHN +++++
Sbjct: 918 TLVDVEEEEKERALY----YHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIA 977

Query: 736 LLTGREIVIRDSKQLHKFSNGYCSCGGF 761
            +  REIV+RD+ + H+F +G CSCG +
Sbjct: 978 KVYNREIVLRDANRFHRFKDGICSCGDY 989

[Close]
BLAST of CmaCh12G001810 vs. Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 5.0e-126
Identity = 260/725 (35.86%), Postives = 424/725 (58.48%), Query Frame = 1 

Query: 50  DAEPKFVDVREALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEI-----IHGHIVKTGT 109
           +A   F+D+   + +  E        YV LL    +  LA E  +     +HGH++ TG 
Sbjct: 292 EATKLFMDMNSMIDVSPES-------YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 351

Query: 110 HEDLFVMTN-LVNVYAKCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFI 169
            + +  + N LVN+YAKCG +  AR+VF  +  ++ V+W +++TG  QN   + A++ + 
Sbjct: 352 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 411

Query: 170 EMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFG 229
            M +    P +FTL   L++C+SL+  +LG+Q+H   +K  +D + S+ N+L + Y++ G
Sbjct: 412 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 471

Query: 230 CLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARS--LCFFTKMLSEGVEPNEYTLTSV 289
            L    + F  + E + +SW S++ A   + ++     +CF     + G + N  T +SV
Sbjct: 472 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA-GQKLNRITFSSV 531

Query: 290 LSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGM-ETLN 349
           LS    +    LG QIH L++K         +N+++  Y KCG +   +K+F  M E  +
Sbjct: 532 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 591

Query: 350 LITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRL 409
            +TWNSMI+G+        ++L A      AL++   +  +G + D F +++VLS  + +
Sbjct: 592 NVTWNSMISGYI------HNELLAK-----ALDLVWFMLQTGQRLDSFMYATVLSAFASV 651

Query: 410 VALEQGEQTHAQIIKSGVLADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMI 469
             LE+G + HA  +++ + +D+VVG+AL+ MY+KCG +  A + F  MP R   SW SMI
Sbjct: 652 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 711

Query: 470 TGFARHGLSQQALQLFEDMRLAG-VKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCR 529
           +G+ARHG  ++AL+LFE M+L G   P+ +TFVGVLSACSHAGL++E   +FE M     
Sbjct: 712 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 771

Query: 530 IEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIW-SMLIAGCRSHG-NSELGFY 589
           + P ++HF+CM D+  R G +++  D ++KM  +PN +IW ++L A CR++G  +ELG  
Sbjct: 772 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 831

Query: 590 AAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVY 649
           AAE L +L P++  +Y+ L NMY + GRW+D+   RK MK+  V K   +SW+++K+ V+
Sbjct: 832 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 891

Query: 650 SFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIYHSEK 709
            F   DKSH     +YK L+ L  +++  GY P     + + E++  E + S   YHSEK
Sbjct: 892 MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILS---YHSEK 951

Query: 710 LAVAFGLLNLPKAT-QIRVVKNITMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYC 761
           LAVAF L     +T  IR++KN+ +C DCH+  +++S + GR+I++RDS + H F +G C
Sbjct: 952 LAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGAC 994

[Close]
BLAST of CmaCh12G001810 vs. TrEMBL
Match: A0A0A0LRW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372180 PE=4 SV=1)

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 623/765 (81.44%), Postives = 687/765 (89.80%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHST-SLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVR 60
           MAS+PSV+LTAAL L++  RKRHST S  L DK  SV +QKN SLIQLNV      VD  
Sbjct: 1   MASVPSVSLTAALKLETHPRKRHSTASFPLNDKDKSVGFQKNHSLIQLNV------VDAE 60

Query: 61  EALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYA 120
           E     K GT +++SYY PLLQEC+DR LA EA +IHGHIVKTG HEDLFVMT LVNVY+
Sbjct: 61  EP----KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYS 120

Query: 121 KCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGI 180
           KCGV+E A KVFDNLPRRNV AWTTL+TGYVQNS PL AL++FI+ML+AGAYP+N+TLGI
Sbjct: 121 KCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGI 180

Query: 181 VLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKN 240
           VLNACSSLQSIE GKQVHAY+IKYH+DFDTSIGNSLSSFYSKF  LE AI+AF+ IKEK+
Sbjct: 181 VLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKD 240

Query: 241 VISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHS 300
           VISWTSV+S+C DNGQAARSL FF  MLS+G++PNEYTLTSVLS CCVMLTL LGAQIHS
Sbjct: 241 VISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS 300

Query: 301 LSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAE 360
           LSIKLGYGSSI IKNS+MYLYLKCGWLIEAQKLFEGMETLNL+TWN+MIAGHAKMMD AE
Sbjct: 301 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 360

Query: 361 DDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVL 420
           DD+AAHKSGSTAL MFQKL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ H QIIKSGVL
Sbjct: 361 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 420

Query: 421 ADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 480
           AD+VVGTAL+SMYNKCGSI +A KAFLEMPSRT+ISWTSMITGFARHGLSQQALQLFEDM
Sbjct: 421 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 480

Query: 481 RLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGR 540
           RL G+KPNQ+TFVGVLSACSHAGL DEALYYFE+MQKQ  I+PVMDHFAC+IDMY+RLGR
Sbjct: 481 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGR 540

Query: 541 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNM 600
           VEEAFDVV KMNFEPNE IWSMLIAGCRSHG S+LGFYAAEQLLKL+PKD E+Y+SLLNM
Sbjct: 541 VEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNM 600

Query: 601 YISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETL 660
           +ISAGRWKDVS VRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQ+ EMYKLLET+
Sbjct: 601 HISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 660

Query: 661 LDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNIT 720
           L+EVK LGYEP++ +EVIE+E+ +E V SST+ HSEKLA+AFGLLNLP AT IRVVK+IT
Sbjct: 661 LNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSIT 720

Query: 721 MCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           MCRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSCGG+GD L
Sbjct: 721 MCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGYGDNL 755

[Close]
BLAST of CmaCh12G001810 vs. TrEMBL
Match: W9RX12_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025549 PE=4 SV=1)

HSP 1 Score: 1050.0 bits (2714), Expect = 1.4e-303
Identity = 507/764 (66.36%), Postives = 638/764 (83.51%), Query Frame = 1 

Query: 2   ASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAE-PKFVDVRE 61
           +SLPSV +     LDSD+RK H +  L  +KS SVSYQ++ S+  L   +E     D RE
Sbjct: 3   SSLPSVAVKCTPKLDSDLRK-HPSVFLSNEKSPSVSYQRSGSITHLEGTSELSSSTDFRE 62

Query: 62  ALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 121
           ALS ++EG + ++S+Y  LL+ C+D   ++ AE +H HI+KTG HED FV T LVNVY K
Sbjct: 63  ALSAMREGASTESSHYARLLKRCIDDNSSSTAETVHAHIIKTGFHEDSFVSTFLVNVYVK 122

Query: 122 CGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIV 181
           CGV+E ARKVFDNLPRRNVVAWTTL+TGYV NSQP  A++VF EML+AGAYP N+TLGIV
Sbjct: 123 CGVMEYARKVFDNLPRRNVVAWTTLMTGYVHNSQPELAIRVFQEMLEAGAYPANYTLGIV 182

Query: 182 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 241
           LNACSSLQ +++GKQ+H+YI+KYH+DFDTSIGNSL S YSK G L+LA++AF+KI+EKNV
Sbjct: 183 LNACSSLQLVDVGKQLHSYIVKYHIDFDTSIGNSLCSLYSKLGHLDLAVKAFEKIREKNV 242

Query: 242 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 301
           ISWT+V+SACG+N +AAR L FF  MLS+G+EPNE+TLTSVLS CCVM  LS+G+Q+HSL
Sbjct: 243 ISWTAVISACGNNSEAARGLGFFIDMLSKGIEPNEFTLTSVLSLCCVMAYLSVGSQVHSL 302

Query: 302 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 361
           SIKLG+ S++ ++N++MYLYLK G + EA+KLF+GME  +L+TWN+MIAGHA+MM+   D
Sbjct: 303 SIKLGFYSNLRVRNAIMYLYLKTGRVKEAKKLFDGMEVNSLVTWNAMIAGHAQMMELEGD 362

Query: 362 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLA 421
            L+A++SG+ AL +F KL+ SG+K DLFTFSS+L+VCS LVALEQGEQ HAQ IK G L+
Sbjct: 363 GLSAYQSGNEALYIFSKLNRSGMKSDLFTFSSILTVCSSLVALEQGEQIHAQTIKMGFLS 422

Query: 422 DIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 481
           D+VVGTALI+MYNKCGSI +A KAF+EM +RTLISWTSMIT FA+HG++QQAL LFEDMR
Sbjct: 423 DVVVGTALINMYNKCGSIEKASKAFVEMSTRTLISWTSMITSFAQHGMTQQALHLFEDMR 482

Query: 482 LAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRV 541
           LAGV+PNQITFVG+LSACSHAG+VDEAL YFE+MQK+ RI PVMDH++C+IDM++RLGR+
Sbjct: 483 LAGVRPNQITFVGILSACSHAGMVDEALIYFEMMQKEYRIRPVMDHYSCLIDMFVRLGRL 542

Query: 542 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMY 601
           +EAFD++K M+FEP+E IWS L+AGCRSHGN ELGFYAAEQLLKL+PKD E+Y+ LLNMY
Sbjct: 543 DEAFDLIKTMDFEPSEFIWSNLVAGCRSHGNLELGFYAAEQLLKLKPKDAETYVLLLNMY 602

Query: 602 ISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLL 661
           +SAGRWKDVS VRK+MKEEK+GKLKDWSWISI++KVYSFKPNDK H Q A+++  LE+L+
Sbjct: 603 LSAGRWKDVSRVRKMMKEEKLGKLKDWSWISIQDKVYSFKPNDKLHHQNADLHTFLESLI 662

Query: 662 DEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITM 721
           D+ K  GYE ++ +E+ +E++ + +  SST YHSEKLA+AFGLLN+P +  IRV+KN  M
Sbjct: 663 DQAKGAGYEKLEDLEMTDEDEVESS--SSTTYHSEKLAIAFGLLNMPSSAPIRVIKNFIM 722

Query: 722 CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           CRDCHNF++ +SLLT REI IRDSK+LHK  NG CSCG FG L+
Sbjct: 723 CRDCHNFMKSISLLTAREITIRDSKRLHKIVNGKCSCGDFGILI 763

[Close]
BLAST of CmaCh12G001810 vs. TrEMBL
Match: F6GZK5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07970 PE=4 SV=1)

HSP 1 Score: 1041.6 bits (2692), Expect = 4.8e-301
Identity = 508/766 (66.32%), Postives = 637/766 (83.16%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVRE 60
           MASLPSV +T     +S+ RK +S S L  +KS SVSYQ++    QL+  +E + +D RE
Sbjct: 1   MASLPSVAVTRTPKSESEFRK-YSASFLPSEKSPSVSYQRST---QLDGVSEARCLDFRE 60

Query: 61  ALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
           ALS ++EGT V++++YVP+LQEC+D+KL ++A+ IH HIVKTG H+D F+MT LVNVYAK
Sbjct: 61  ALSFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAK 120

Query: 121 CGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIV 180
           CG +E ARKVFD LPRRNVV+WTTL+TGYV +S+P  A++VF EML+AGAYPTN+TLG  
Sbjct: 121 CGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTA 180

Query: 181 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
           L+A S L S ELGKQ+H Y IKY ++FD SIGNSL S YSK G LE A++AF++I++KNV
Sbjct: 181 LSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNV 240

Query: 241 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 300
           ISWT+V+SA GDNG+AA  L FF +MLSE VEPNE+TLTS LS CCVM +L +G QIHSL
Sbjct: 241 ISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSL 300

Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 360
           +IKLG+ S++PIKNS+MYLYLKCGW+ EA+KLF+ MET++L+TWN+MIAGHA+MMD A+D
Sbjct: 301 TIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKD 360

Query: 361 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLA 420
           DLAAH+ G+ AL++F KL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ HAQ IK+G L+
Sbjct: 361 DLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLS 420

Query: 421 DIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
           D+VVGTAL++MYNKCGSI  A KAF+EM  RTLISWTSMITG+A++G  QQAL LFEDMR
Sbjct: 421 DVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMR 480

Query: 481 LAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRV 540
           LAGV+PN+ITFVGVLSACSHAG+VDEAL YF++M+ + +I PVMDH+AC+IDM++RLGR+
Sbjct: 481 LAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRL 540

Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMY 600
           +EAFD +K+M+ EPNE IWS+LIAGCRS G  ELGFYAAEQLL L+PKDTE+Y  LLNMY
Sbjct: 541 DEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMY 600

Query: 601 ISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLL 660
           +SAG+WK+VS VRK+MKEEK+G+LKDWSWISIK+K+YSFK N +SH Q+ EMY+LL  L 
Sbjct: 601 LSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLH 660

Query: 661 DEVKPLGYEPVQYMEVIEEEK--GDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNI 720
           ++ K  GYE  + +EV +EE+   +E   +S +YHSEKLA+AFGLLN   A  IRV K+I
Sbjct: 661 EKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSI 720

Query: 721 TMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           +MCRDCHNFIR +SLL+ REI+IRDSK+LHKF NG+CSCG FG L+
Sbjct: 721 SMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDFGTLI 762

[Close]
BLAST of CmaCh12G001810 vs. TrEMBL
Match: A0A061FF50_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034560 PE=4 SV=1)

HSP 1 Score: 989.2 bits (2556), Expect = 2.8e-285
Identity = 479/766 (62.53%), Postives = 616/766 (80.42%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEP-KFVDVR 60
           MASLPS   + +L L+ D RK HS + L  DKS S+SY +     QL+  +E  + +D +
Sbjct: 1   MASLPSFAGSGSLKLEPDSRK-HSPASLSTDKSPSISYPRTHKFTQLDGKSESVRSMDFQ 60

Query: 61  EALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYA 120
           EALS +K+G+ ++TSYYVPLLQEC+DR   A A+ +H HI+KTGTHEDLFV+T LVNVYA
Sbjct: 61  EALSRIKDGSRIETSYYVPLLQECIDRNSLAGAQNLHSHIIKTGTHEDLFVLTFLVNVYA 120

Query: 121 KCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGI 180
           KCG +E ARKVF +LPR+NVVAWTTL+TGYV N QP  A+ VF +ML+ G+YPTN+TLG 
Sbjct: 121 KCGAMENARKVFTSLPRKNVVAWTTLMTGYVHNDQPDAAIYVFQQMLEFGSYPTNYTLGS 180

Query: 181 VLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKN 240
            L ACS+L  +ELGKQ+HAY IKY +D DTS+GNSL   YSK   L  AI+AFQKI  +N
Sbjct: 181 ALTACSALNFLELGKQIHAYSIKYQIDHDTSVGNSLCCLYSKCASLNSAIKAFQKIGRRN 240

Query: 241 VISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHS 300
           VISWT +VSACGDN +AA+ L FFT+ML+E VEPNE+TLTS LS CC M +L +GAQ+H 
Sbjct: 241 VISWTIIVSACGDNARAAKGLRFFTEMLAENVEPNEFTLTSALSMCCTMQSLRVGAQVHC 300

Query: 301 LSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAE 360
           LSIKLGYGS++ IKNS+MYLYLKCGW  EAQ+LF GME ++L+T NSMIAG+ +MMD A+
Sbjct: 301 LSIKLGYGSNLRIKNSIMYLYLKCGWFREAQQLFNGMEDMSLVTMNSMIAGYGEMMDLAK 360

Query: 361 DDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVL 420
           DDL+A+ +G+ ALN+F KL++SG KPDLFTFSSVL++CS++VALEQGEQ HAQ +K+G L
Sbjct: 361 DDLSAYHNGTEALNIFSKLNNSGFKPDLFTFSSVLTICSKMVALEQGEQIHAQTLKTGYL 420

Query: 421 ADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 480
           +D++VGTAL++MYNKCGSI  A +AFLEM +RTLISWTSMI  F ++G +QQALQLFEDM
Sbjct: 421 SDVIVGTALVNMYNKCGSIERASRAFLEMSARTLISWTSMINAFTQNGQTQQALQLFEDM 480

Query: 481 RLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGR 540
           RL GV+PNQ+TFVGVLSAC HAG+VDEA  Y E+MQK  +I PVMDH+AC+IDM++RLGR
Sbjct: 481 RLVGVRPNQVTFVGVLSACGHAGMVDEAFGYLEMMQKDYKIRPVMDHYACLIDMFVRLGR 540

Query: 541 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNM 600
           + EAFD+++KM+F+PNE IWS+L+AGC+ HG +ELGFYAAE+LL+L+PKD E+Y+ LLNM
Sbjct: 541 LAEAFDLIRKMDFQPNEFIWSLLLAGCKRHGKTELGFYAAEKLLELKPKDAETYLLLLNM 600

Query: 601 YISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETL 660
           Y SA RW+DVS VR LM+E+++ KL DWSWIS K+KVY+FK +D+      EM++LL+ L
Sbjct: 601 YKSAERWEDVSKVRALMEEKRLEKLMDWSWISTKDKVYAFK-SDERQTYGTEMHELLDEL 660

Query: 661 LDEVKP-LGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNI 720
           LD+ K  LGYE ++ +++++EE  +E  FSST+ HSEKLA AFGLLN+  A  IR++KNI
Sbjct: 661 LDKAKSLLGYESLESIDLVDEE-DEEKTFSSTVQHSEKLAAAFGLLNIADAAPIRLIKNI 720

Query: 721 TMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           +MCR CHNF++ +S L  R+I++RD K+LHKF NG CSCG +G LL
Sbjct: 721 SMCRGCHNFMKAISSLNARKIIVRDRKRLHKFVNGQCSCGDYGGLL 763

[Close]
BLAST of CmaCh12G001810 vs. TrEMBL
Match: A0A067H144_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004369mg PE=4 SV=1)

HSP 1 Score: 988.4 bits (2554), Expect = 4.8e-285
Identity = 478/763 (62.65%), Postives = 619/763 (81.13%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQS-LIQLNVDAEP-KFVDV 60
           MAS+P     AA  L++  R+  S+   LKDK+ +VSYQ++ S LIQLN ++EP + +  
Sbjct: 1   MASVPWAA-AAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGF 60

Query: 61  REALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVY 120
           +EALS+L EG  V+TS YV LLQECV+RK  + AEIIH HIVKTG+H+D FVMT LVNVY
Sbjct: 61  QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 120

Query: 121 AKCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLG 180
            KCG +E+A+KVFDNLPR NVV+WT+L++GYVQNSQP  A+ VF++ML+AG YPTN TLG
Sbjct: 121 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 180

Query: 181 IVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEK 240
             L ACSSL+SI LGKQ+HAY++KY  + DTS+GNSL S YS  G L  AI+AF +I+EK
Sbjct: 181 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 240

Query: 241 NVISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIH 300
           NV+SWT+V+ ACG+NG+A + L FF+KMLSEG++PNE+TLTS+ S C  ML+L +GAQ+H
Sbjct: 241 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 300

Query: 301 SLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAA 360
           SL IKLGY S++ ++NS+MYLYLKCG + EAQKLF+GM  +NL+TWN+MIAGHA+MMD A
Sbjct: 301 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 360

Query: 361 EDDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGV 420
           +DDL+AH  G+ AL++F KL+ SG+KPDL+TFSS+L++CSRLVALEQGEQ HA  +K+G 
Sbjct: 361 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 420

Query: 421 LADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFED 480
           L+D+VVGTAL++MY KCG I  A + F+EM +RTLISWTSMITGFA H LS QALQLFED
Sbjct: 421 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 480

Query: 481 MRLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLG 540
           M LAGV+PNQ+TFVG L+ACS+AG+V EAL YFE+MQK+ +I+PVMDH+ C+IDM++RLG
Sbjct: 481 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 540

Query: 541 RVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLN 600
            +EEAFD +KKM+FEPNE+IWS+ IAGCR HGN ELGFYAAEQLLKL+PKD ESY  LL+
Sbjct: 541 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 600

Query: 601 MYISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLET 660
           +++SAGRW+DV+ V+ L +EEK+ +  DWSWI IK+KVYSFKPND  H Q+AE++K+L+ 
Sbjct: 601 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 660

Query: 661 LLDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNI 720
           L+++ K  GY+  +  E+ +EE       S+++YHSEKLA+AFGLLN P  + I VVK+ 
Sbjct: 661 LVEKAKCFGYKQQESFELTDEE-------SASVYHSEKLAIAFGLLNTPIVSPILVVKST 720

Query: 721 TMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFG 762
           TMCRDCHNFI+ ++ LT REI++RDSK+LHKF NG+C+C  FG
Sbjct: 721 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755

[Close]
BLAST of CmaCh12G001810 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-135
Identity = 253/682 (37.10%), Postives = 390/682 (57.18%), Query Frame = 1 

Query: 79  LLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVVEKARKVFDNLPRRN 138
           LL+ C D       + IHG +VK+G   DLF MT L N+YAKC  V +ARKVFD +P R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200

Query: 139 VVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHA 198
           +V+W T+V GY QN     AL++   M +    P+  T+  VL A S+L+ I +GK++H 
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260

Query: 199 YIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNGQAAR 258
           Y ++   D   +I  +L   Y+K G LE A + F  + E+NV+SW S++ A   N     
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 259 SLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKNSVMY 318
           ++  F KML EGV+P + ++   L  C  +  L  G  IH LS++LG   ++ + NS++ 
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380

Query: 319 LYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNMFQKL 378
           +Y KC  +  A  +F  +++  L++WN+MI G A+     +           ALN F ++
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID-----------ALNYFSQM 440

Query: 379 HHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLADIVVGTALISMYNKCGSI 438
               +KPD FT+ SV++  + L      +  H  +++S +  ++ V TAL+ MY KCG+I
Sbjct: 441 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 500

Query: 439 SEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGVKPNQITFVGVLSAC 498
             AR  F  M  R + +W +MI G+  HG  + AL+LFE+M+   +KPN +TF+ V+SAC
Sbjct: 501 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 560

Query: 499 SHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEII 558
           SH+GLV+  L  F +M++   IE  MDH+  M+D+  R GR+ EA+D + +M  +P   +
Sbjct: 561 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 620

Query: 559 WSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRKLMKE 618
           +  ++  C+ H N      AAE+L +L P D   ++ L N+Y +A  W+ V  VR  M  
Sbjct: 621 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 680

Query: 619 EKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE 678
           + + K    S + IK +V+SF     +H  + ++Y  LE L+  +K  GY P   + +  
Sbjct: 681 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV 740

Query: 679 EEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMCRDCHNFIRFVSLLTGRE 738
           E    E + S+   HSEKLA++FGLLN    T I V KN+ +C DCHN  +++SL+TGRE
Sbjct: 741 ENDVKEQLLST---HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 800

Query: 739 IVIRDSKQLHKFSNGYCSCGGF 761
           IV+RD ++ H F NG CSCG +
Sbjct: 801 IVVRDMQRFHHFKNGACSCGDY 808

[Close]
BLAST of CmaCh12G001810 vs. TAIR10
Match: AT2G27610.1 (AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 480.7 bits (1236), Expect = 1.7e-135
Identity = 249/703 (35.42%), Postives = 414/703 (58.89%), Query Frame = 1 

Query: 62  LSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKC 121
           + +  EGT   +  +   L    +  +      +H  +VK G  + + V  +L+N+Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242

Query: 122 GVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVL 181
           G V KAR +FD    ++VV W ++++GY  N   L AL +F  M       +  +   V+
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302

Query: 182 NACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIK-EKNV 241
             C++L+ +   +Q+H  ++KY   FD +I  +L   YSK   +  A+R F++I    NV
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362

Query: 242 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 301
           +SWT+++S    N     ++  F++M  +GV PNE+T + +L+     L +   +++H+ 
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQ 422

Query: 302 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 361
            +K  Y  S  +  +++  Y+K G + EA K+F G++  +++ W++M+AG+A+  +    
Sbjct: 423 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET--- 482

Query: 362 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRL-VALEQGEQTHAQIIKSGVL 421
                     A+ MF +L   GIKP+ FTFSS+L+VC+    ++ QG+Q H   IKS + 
Sbjct: 483 --------EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 542

Query: 422 ADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 481
           + + V +AL++MY K G+I  A + F     + L+SW SMI+G+A+HG + +AL +F++M
Sbjct: 543 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 602

Query: 482 RLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGR 541
           +   VK + +TF+GV +AC+HAGLV+E   YF++M + C+I P  +H +CM+D+Y R G+
Sbjct: 603 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 662

Query: 542 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNM 601
           +E+A  V++ M       IW  ++A CR H  +ELG  AAE+++ ++P+D+ +Y+ L NM
Sbjct: 663 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 722

Query: 602 YISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETL 661
           Y  +G W++ + VRKLM E  V K   +SWI +K K YSF   D+SH    ++Y  LE L
Sbjct: 723 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 782

Query: 662 LDEVKPLGYEP-VQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNI 721
              +K LGYEP   Y+    +++  E V +    HSE+LA+AFGL+  PK + + ++KN+
Sbjct: 783 STRLKDLGYEPDTSYVLQDIDDEHKEAVLAQ---HSERLAIAFGLIATPKGSPLLIIKNL 842

Query: 722 TMCRDCHNFIRFVSLLTGREIVIRDSKQLHKF-SNGYCSCGGF 761
            +C DCH  I+ ++ +  REIV+RDS + H F S+G CSCG F
Sbjct: 843 RVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867

[Close]
BLAST of CmaCh12G001810 vs. TAIR10
Match: AT3G49170.1 (AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 465.7 bits (1197), Expect = 5.5e-131
Identity = 244/712 (34.27%), Postives = 417/712 (58.57%), Query Frame = 1 

Query: 58  VREALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHE-DLFVMTNLVN 117
           ++  +  L+ G       Y  +++ C +        +  G ++KTG  E D+ V  +L++
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210

Query: 118 VYAKC-GVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNF 177
           ++ K     E A KVFD +   NVV WT ++T  +Q   P  A++ F++M+ +G     F
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 178 TLGIVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKF---GCLELAIRAF 237
           TL  V +AC+ L+++ LGKQ+H++ I+  L  D     SL   Y+K    G ++   + F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVF 330

Query: 238 QKIKEKNVISWTSVVSACGDN-GQAARSLCFFTKMLSEG-VEPNEYTLTSVLSTCCVMLT 297
            ++++ +V+SWT++++    N   A  ++  F++M+++G VEPN +T +S    C  +  
Sbjct: 331 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 390

Query: 298 LSLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAG 357
             +G Q+   + K G  S+  + NSV+ +++K   + +AQ+ FE +   NL+++N+ + G
Sbjct: 391 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 450

Query: 358 HAKMMDAAEDDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTH 417
             + ++  +           A  +  ++    +    FTF+S+LS  + + ++ +GEQ H
Sbjct: 451 TCRNLNFEQ-----------AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 510

Query: 418 AQIIKSGVLADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQ 477
           +Q++K G+  +  V  ALISMY+KCGSI  A + F  M +R +ISWTSMITGFA+HG + 
Sbjct: 511 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 570

Query: 478 QALQLFEDMRLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACM 537
           + L+ F  M   GVKPN++T+V +LSACSH GLV E   +F  M +  +I+P M+H+ACM
Sbjct: 571 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 630

Query: 538 IDMYMRLGRVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDT 597
           +D+  R G + +AF+ +  M F+ + ++W   +  CR H N+ELG  AA ++L+L P + 
Sbjct: 631 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 690

Query: 598 ESYISLLNMYISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTA 657
            +YI L N+Y  AG+W++ + +R+ MKE  + K    SWI + +K++ F   D +H    
Sbjct: 691 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 750

Query: 658 EMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIY-HSEKLAVAFGLLNLPK 717
           ++Y  L+ L+ E+K  GY P   + + + EE+ DE      +Y HSEK+AVAFGL++  K
Sbjct: 751 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 810

Query: 718 ATQIRVVKNITMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGF 761
           +  +RV KN+ +C DCHN ++++S ++GREIV+RD  + H F +G CSC  +
Sbjct: 811 SRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDY 849

[Close]
BLAST of CmaCh12G001810 vs. TAIR10
Match: AT4G33170.1 (AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 461.1 bits (1185), Expect = 1.4e-129
Identity = 234/688 (34.01%), Postives = 407/688 (59.16%), Query Frame = 1 

Query: 76  YVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKCGVVEKARKVFDNLP 135
           ++ +L   V     A  + +H   +K G    L V  +L+N+Y K      AR VFDN+ 
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377

Query: 136 RRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVLNACSSL-QSIELGK 195
            R++++W +++ G  QN   + A+ +F+++L+ G  P  +T+  VL A SSL + + L K
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437

Query: 196 QVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVISWTSVVSACGDNG 255
           QVH + IK +   D+ +  +L   YS+  C++ A   F++    ++++W ++++    + 
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSH 497

Query: 256 QAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKN 315
              ++L  F  M  +G   +++TL +V  TC  +  ++ G Q+H+ +IK GY   + + +
Sbjct: 498 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 557

Query: 316 SVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNM 375
            ++ +Y+KCG +  AQ  F+ +   + + W +MI+G    ++  E++ A H        +
Sbjct: 558 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG---CIENGEEERAFH--------V 617

Query: 376 FQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLADIVVGTALISMYNK 435
           F ++   G+ PD FT +++    S L ALEQG Q HA  +K     D  VGT+L+ MY K
Sbjct: 618 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 677

Query: 436 CGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGVKPNQITFVGV 495
           CGSI +A   F  +    + +W +M+ G A+HG  ++ LQLF+ M+  G+KP+++TF+GV
Sbjct: 678 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 737

Query: 496 LSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEP 555
           LSACSH+GLV EA  +   M     I+P ++H++C+ D   R G V++A ++++ M+ E 
Sbjct: 738 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 797

Query: 556 NEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRK 615
           +  ++  L+A CR  G++E G   A +LL+L P D+ +Y+ L NMY +A +W ++   R 
Sbjct: 798 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 857

Query: 616 LMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYM 675
           +MK  KV K   +SWI +K K++ F  +D+S+ QT  +Y+ ++ ++ ++K  GY P    
Sbjct: 858 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDF 917

Query: 676 EV--IEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMCRDCHNFIRFVS 735
            +  +EEE+ +  ++    YHSEKLAVAFGLL+ P +T IRV+KN+ +C DCHN +++++
Sbjct: 918 TLVDVEEEEKERALY----YHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIA 977

Query: 736 LLTGREIVIRDSKQLHKFSNGYCSCGGF 761
            +  REIV+RD+ + H+F +G CSCG +
Sbjct: 978 KVYNREIVLRDANRFHRFKDGICSCGDY 989

[Close]
BLAST of CmaCh12G001810 vs. TAIR10
Match: AT5G09950.1 (AT5G09950.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 453.4 bits (1165), Expect = 2.8e-127
Identity = 260/725 (35.86%), Postives = 424/725 (58.48%), Query Frame = 1 

Query: 50  DAEPKFVDVREALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEI-----IHGHIVKTGT 109
           +A   F+D+   + +  E        YV LL    +  LA E  +     +HGH++ TG 
Sbjct: 292 EATKLFMDMNSMIDVSPES-------YVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 351

Query: 110 HEDLFVMTN-LVNVYAKCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFI 169
            + +  + N LVN+YAKCG +  AR+VF  +  ++ V+W +++TG  QN   + A++ + 
Sbjct: 352 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 411

Query: 170 EMLQAGAYPTNFTLGIVLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFG 229
            M +    P +FTL   L++C+SL+  +LG+Q+H   +K  +D + S+ N+L + Y++ G
Sbjct: 412 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 471

Query: 230 CLELAIRAFQKIKEKNVISWTSVVSACGDNGQAARS--LCFFTKMLSEGVEPNEYTLTSV 289
            L    + F  + E + +SW S++ A   + ++     +CF     + G + N  T +SV
Sbjct: 472 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA-GQKLNRITFSSV 531

Query: 290 LSTCCVMLTLSLGAQIHSLSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGM-ETLN 349
           LS    +    LG QIH L++K         +N+++  Y KCG +   +K+F  M E  +
Sbjct: 532 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 591

Query: 350 LITWNSMIAGHAKMMDAAEDDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRL 409
            +TWNSMI+G+        ++L A      AL++   +  +G + D F +++VLS  + +
Sbjct: 592 NVTWNSMISGYI------HNELLAK-----ALDLVWFMLQTGQRLDSFMYATVLSAFASV 651

Query: 410 VALEQGEQTHAQIIKSGVLADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMI 469
             LE+G + HA  +++ + +D+VVG+AL+ MY+KCG +  A + F  MP R   SW SMI
Sbjct: 652 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 711

Query: 470 TGFARHGLSQQALQLFEDMRLAG-VKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCR 529
           +G+ARHG  ++AL+LFE M+L G   P+ +TFVGVLSACSHAGL++E   +FE M     
Sbjct: 712 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 771

Query: 530 IEPVMDHFACMIDMYMRLGRVEEAFDVVKKMNFEPNEIIW-SMLIAGCRSHG-NSELGFY 589
           + P ++HF+CM D+  R G +++  D ++KM  +PN +IW ++L A CR++G  +ELG  
Sbjct: 772 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 831

Query: 590 AAEQLLKLRPKDTESYISLLNMYISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVY 649
           AAE L +L P++  +Y+ L NMY + GRW+D+   RK MK+  V K   +SW+++K+ V+
Sbjct: 832 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 891

Query: 650 SFKPNDKSHCQTAEMYKLLETLLDEVKPLGYEPVQYMEVIE-EEKGDETVFSSTIYHSEK 709
            F   DKSH     +YK L+ L  +++  GY P     + + E++  E + S   YHSEK
Sbjct: 892 MFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILS---YHSEK 951

Query: 710 LAVAFGLLNLPKAT-QIRVVKNITMCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYC 761
           LAVAF L     +T  IR++KN+ +C DCH+  +++S + GR+I++RDS + H F +G C
Sbjct: 952 LAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGAC 994

[Close]
BLAST of CmaCh12G001810 vs. NCBI nr
Match: gi|659088399|ref|XP_008444960.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis melo])

HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 622/764 (81.41%), Postives = 682/764 (89.27%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVRE 60
           MAS PSV+LTAALNL+   RKRHSTS  L DK  SV +QKN SLIQLNV      VD  E
Sbjct: 1   MASFPSVSLTAALNLEPHPRKRHSTSCPLNDKDKSVGFQKNHSLIQLNV------VDAEE 60

Query: 61  ALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
                K GT +++SYY PLLQEC+DR LA EA +IHGHIVKTG HEDLFVMT LVNVY+K
Sbjct: 61  P----KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSK 120

Query: 121 CGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIV 180
           CGV+E A KVFDNLPRRNV+AWTTL+TGYVQNS PL AL++FI+ML+AGAYP+N+TLGIV
Sbjct: 121 CGVMESAHKVFDNLPRRNVIAWTTLLTGYVQNSHPLLALQLFIQMLEAGAYPSNYTLGIV 180

Query: 181 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
           LNACSSLQSIE GKQVHAYIIKYH+DFDTSIGNSLSSFYSKF  LE AIRAFQKIKEK+V
Sbjct: 181 LNACSSLQSIEFGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFRSLEFAIRAFQKIKEKDV 240

Query: 241 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 300
           ISWTS +S+C DNGQAARSL FF  ML +GVEPNEYTL SVLS CCV LTL LGAQIHSL
Sbjct: 241 ISWTSAISSCCDNGQAARSLSFFIDMLLDGVEPNEYTLASVLSACCVKLTLDLGAQIHSL 300

Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 360
           SIKLGYGSSI IKNS+MYLYLKCGWLIEAQKLFEGMETLNLITWN+MIAGHAKMMD AED
Sbjct: 301 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAED 360

Query: 361 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLA 420
           D+AAHKSGSTAL MFQKL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ H QIIKSGVLA
Sbjct: 361 DIAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA 420

Query: 421 DIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
           D+VVGTAL+SMYNKCGSI +A KAFLEMPSRT+ISWTSMITGFARHGLSQQALQLFEDMR
Sbjct: 421 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR 480

Query: 481 LAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRV 540
           L G+KPNQ+TFVGVLSACSHAGL DEALYYFE+MQKQ  I+PVMDHFAC+IDMY+RLGRV
Sbjct: 481 LVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRV 540

Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMY 600
           EEAFDVV+KMNFEPNE IWSMLIAGCRSHG S+LGFYAAEQLLKL+PKD E+Y+SLLNM+
Sbjct: 541 EEAFDVVQKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMH 600

Query: 601 ISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLL 660
           +SAGRWK+VS VRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQ+AEMY LLET+ 
Sbjct: 601 VSAGRWKEVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVF 660

Query: 661 DEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITM 720
           +EVK LGYEPV+ +E+IE+E+ +  V S TI+HSEKLA+AFGLLNLP AT IRVVK+ITM
Sbjct: 661 NEVKALGYEPVEDVELIEKEEDEGKVLSPTIHHSEKLAIAFGLLNLPTATPIRVVKSITM 720

Query: 721 CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           CRDCH FIRFVSLL GRE+VIRDSKQLHKF NGYCSCGG+GD L
Sbjct: 721 CRDCHKFIRFVSLLKGREVVIRDSKQLHKFLNGYCSCGGYGDYL 754

[Close]
BLAST of CmaCh12G001810 vs. NCBI nr
Match: gi|700207652|gb|KGN62771.1| (hypothetical protein Csa_2G372180 [Cucumis sativus])

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 623/765 (81.44%), Postives = 687/765 (89.80%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHST-SLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVR 60
           MAS+PSV+LTAAL L++  RKRHST S  L DK  SV +QKN SLIQLNV      VD  
Sbjct: 1   MASVPSVSLTAALKLETHPRKRHSTASFPLNDKDKSVGFQKNHSLIQLNV------VDAE 60

Query: 61  EALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYA 120
           E     K GT +++SYY PLLQEC+DR LA EA +IHGHIVKTG HEDLFVMT LVNVY+
Sbjct: 61  EP----KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYS 120

Query: 121 KCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGI 180
           KCGV+E A KVFDNLPRRNV AWTTL+TGYVQNS PL AL++FI+ML+AGAYP+N+TLGI
Sbjct: 121 KCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGI 180

Query: 181 VLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKN 240
           VLNACSSLQSIE GKQVHAY+IKYH+DFDTSIGNSLSSFYSKF  LE AI+AF+ IKEK+
Sbjct: 181 VLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKD 240

Query: 241 VISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHS 300
           VISWTSV+S+C DNGQAARSL FF  MLS+G++PNEYTLTSVLS CCVMLTL LGAQIHS
Sbjct: 241 VISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS 300

Query: 301 LSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAE 360
           LSIKLGYGSSI IKNS+MYLYLKCGWLIEAQKLFEGMETLNL+TWN+MIAGHAKMMD AE
Sbjct: 301 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 360

Query: 361 DDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVL 420
           DD+AAHKSGSTAL MFQKL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ H QIIKSGVL
Sbjct: 361 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 420

Query: 421 ADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 480
           AD+VVGTAL+SMYNKCGSI +A KAFLEMPSRT+ISWTSMITGFARHGLSQQALQLFEDM
Sbjct: 421 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 480

Query: 481 RLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGR 540
           RL G+KPNQ+TFVGVLSACSHAGL DEALYYFE+MQKQ  I+PVMDHFAC+IDMY+RLGR
Sbjct: 481 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGR 540

Query: 541 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNM 600
           VEEAFDVV KMNFEPNE IWSMLIAGCRSHG S+LGFYAAEQLLKL+PKD E+Y+SLLNM
Sbjct: 541 VEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNM 600

Query: 601 YISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETL 660
           +ISAGRWKDVS VRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQ+ EMYKLLET+
Sbjct: 601 HISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 660

Query: 661 LDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNIT 720
           L+EVK LGYEP++ +EVIE+E+ +E V SST+ HSEKLA+AFGLLNLP AT IRVVK+IT
Sbjct: 661 LNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSIT 720

Query: 721 MCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           MCRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSCGG+GD L
Sbjct: 721 MCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGYGDNL 755

[Close]
BLAST of CmaCh12G001810 vs. NCBI nr
Match: gi|778671898|ref|XP_011649704.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucumis sativus])

HSP 1 Score: 1249.6 bits (3232), Expect = 0.0e+00
Identity = 623/765 (81.44%), Postives = 687/765 (89.80%), Query Frame = 1 

Query: 1   MASLPSVTLTAALNLDSDVRKRHST-SLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVR 60
           MAS+PSV+LTAAL L++  RKRHST S  L DK  SV +QKN SLIQLNV      VD  
Sbjct: 29  MASVPSVSLTAALKLETHPRKRHSTASFPLNDKDKSVGFQKNHSLIQLNV------VDAE 88

Query: 61  EALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYA 120
           E     K GT +++SYY PLLQEC+DR LA EA +IHGHIVKTG HEDLFVMT LVNVY+
Sbjct: 89  EP----KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYS 148

Query: 121 KCGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGI 180
           KCGV+E A KVFDNLPRRNV AWTTL+TGYVQNS PL AL++FI+ML+AGAYP+N+TLGI
Sbjct: 149 KCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGI 208

Query: 181 VLNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKN 240
           VLNACSSLQSIE GKQVHAY+IKYH+DFDTSIGNSLSSFYSKF  LE AI+AF+ IKEK+
Sbjct: 209 VLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKD 268

Query: 241 VISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHS 300
           VISWTSV+S+C DNGQAARSL FF  MLS+G++PNEYTLTSVLS CCVMLTL LGAQIHS
Sbjct: 269 VISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS 328

Query: 301 LSIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAE 360
           LSIKLGYGSSI IKNS+MYLYLKCGWLIEAQKLFEGMETLNL+TWN+MIAGHAKMMD AE
Sbjct: 329 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 388

Query: 361 DDLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVL 420
           DD+AAHKSGSTAL MFQKL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ H QIIKSGVL
Sbjct: 389 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 448

Query: 421 ADIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 480
           AD+VVGTAL+SMYNKCGSI +A KAFLEMPSRT+ISWTSMITGFARHGLSQQALQLFEDM
Sbjct: 449 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 508

Query: 481 RLAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGR 540
           RL G+KPNQ+TFVGVLSACSHAGL DEALYYFE+MQKQ  I+PVMDHFAC+IDMY+RLGR
Sbjct: 509 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGR 568

Query: 541 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNM 600
           VEEAFDVV KMNFEPNE IWSMLIAGCRSHG S+LGFYAAEQLLKL+PKD E+Y+SLLNM
Sbjct: 569 VEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNM 628

Query: 601 YISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETL 660
           +ISAGRWKDVS VRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQ+ EMYKLLET+
Sbjct: 629 HISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETV 688

Query: 661 LDEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNIT 720
           L+EVK LGYEP++ +EVIE+E+ +E V SST+ HSEKLA+AFGLLNLP AT IRVVK+IT
Sbjct: 689 LNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSIT 748

Query: 721 MCRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           MCRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSCGG+GD L
Sbjct: 749 MCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGYGDNL 783

[Close]
BLAST of CmaCh12G001810 vs. NCBI nr
Match: gi|1009150316|ref|XP_015892955.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 530/763 (69.46%), Postives = 646/763 (84.67%), Query Frame = 1 

Query: 2   ASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVREA 61
           +SLPSV +   L LDSD RK+ S S L  DKS++VSYQ++     L+  +EPK +D REA
Sbjct: 3   SSLPSVAVNGTLKLDSDFRKQPS-SFLPTDKSSNVSYQRSYVATHLDGTSEPKSLDFREA 62

Query: 62  LSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKC 121
           LS++KE +TV+++YYV LLQEC+D+  AAEA+++H HI+KTG+H DLFV T LVNVY KC
Sbjct: 63  LSMMKENSTVESTYYVSLLQECIDKNSAAEAQMVHAHIIKTGSHGDLFVSTFLVNVYVKC 122

Query: 122 GVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVL 181
           G +E ARKVFDNLP RNVVAWTTL+TGYV N +P  A++VF+EML+AG YPTN+TLGI L
Sbjct: 123 GTMENARKVFDNLPSRNVVAWTTLMTGYVHNLKPELAIQVFLEMLKAGTYPTNYTLGIAL 182

Query: 182 NACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVI 241
           NAC+SL SI++G+Q+HAYIIKY +DFDTSIGNSL + Y+K   LE +++AF KI+EKNVI
Sbjct: 183 NACTSLHSIKVGEQIHAYIIKYRIDFDTSIGNSLCTLYAKCRDLESSVKAFMKIREKNVI 242

Query: 242 SWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLS 301
           SWT ++SACGDNG+AAR L FF++MLSE VEPNE+TLTSVLS CCVMLTL +G Q+HSLS
Sbjct: 243 SWTGIISACGDNGEAARGLQFFSEMLSEDVEPNEFTLTSVLSLCCVMLTLGVGTQVHSLS 302

Query: 302 IKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDD 361
           IKLGY S +PIKNS+MYLYLKCG + EAQ LFEGMET++LITWN+MIAG+A+MMD   +D
Sbjct: 303 IKLGYESILPIKNSIMYLYLKCGQVKEAQTLFEGMETVSLITWNAMIAGYAQMMDLEGND 362

Query: 362 LAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLAD 421
           L+A++SG+ ALN+F KL+ S +KPDLFTFSS+L+VCS LVALEQGEQ HAQ IK+G L+D
Sbjct: 363 LSAYQSGNEALNIFSKLNRSDMKPDLFTFSSILTVCSSLVALEQGEQIHAQTIKTGFLSD 422

Query: 422 IVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRL 481
           +VVGTALI+MYNKCGSI +A KAFLEM +RTLISWTSMITG A+HG +QQALQLFEDMR 
Sbjct: 423 VVVGTALINMYNKCGSIEKASKAFLEMSTRTLISWTSMITGLAQHGKTQQALQLFEDMRF 482

Query: 482 AGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVE 541
           AGV+PNQITFVGVLSACSHAG+VDEAL YFE+MQK+ +I+PVMDHFAC+IDM++RLGR++
Sbjct: 483 AGVRPNQITFVGVLSACSHAGMVDEALSYFEMMQKEYKIKPVMDHFACLIDMFVRLGRLD 542

Query: 542 EAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYI 601
           EAF+ ++KM+ EP+E IWS+LIAGCRSHGN ELGFYAAEQLLKL+PKD E+Y+ LLNMY+
Sbjct: 543 EAFNFIEKMDIEPSEFIWSILIAGCRSHGNLELGFYAAEQLLKLKPKDIETYVLLLNMYL 602

Query: 602 SAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLD 661
           SAGRWKDVS V+KLMKEEK+GKLKDWSWISIK KVYSFKPNDKSH Q  ++YK LE L+D
Sbjct: 603 SAGRWKDVSRVKKLMKEEKLGKLKDWSWISIKGKVYSFKPNDKSHPQNVDIYKSLENLID 662

Query: 662 EVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMC 721
           E K LGYE ++ + V +E++   +  SS  YHSEKLAVAFGLLN P A  IRV+KN+ MC
Sbjct: 663 EAKSLGYESLETLMVTDEDEEKTSSSSSAHYHSEKLAVAFGLLNTPSAAPIRVMKNVIMC 722

Query: 722 RDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           RDCHNF++ +SLLT REI IRDSK+LHK  NG CSCG FG LL
Sbjct: 723 RDCHNFVKIISLLTDREITIRDSKRLHKIVNGRCSCGDFGGLL 764

[Close]
BLAST of CmaCh12G001810 vs. NCBI nr
Match: gi|1009150318|ref|XP_015892956.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 526/763 (68.94%), Postives = 640/763 (83.88%), Query Frame = 1 

Query: 2   ASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVREA 61
           +SLPSV +   L LDSD RK+ S S L  DK + V+         L+  +EPK +D REA
Sbjct: 3   SSLPSVAVNGTLKLDSDFRKQPS-SFLPTDKRSYVA-------THLDGTSEPKSLDFREA 62

Query: 62  LSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAKC 121
           LS++KE +TV+++YYV LLQEC+D+  AAEA+++H HI+KTG+H DLFV T LVNVY KC
Sbjct: 63  LSMMKENSTVESTYYVSLLQECIDKNSAAEAQMVHAHIIKTGSHGDLFVSTFLVNVYVKC 122

Query: 122 GVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIVL 181
           G +E ARKVFDNLP RNVVAWTTL+TGYV N +P  A++VF+EML+AG YPTN+TLGI L
Sbjct: 123 GTMENARKVFDNLPSRNVVAWTTLMTGYVHNLKPELAIQVFLEMLKAGTYPTNYTLGIAL 182

Query: 182 NACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNVI 241
           NAC+SL SI++G+Q+HAYIIKY +DFDTSIGNSL + Y+K   LE +++AF KI+EKNVI
Sbjct: 183 NACTSLHSIKVGEQIHAYIIKYRIDFDTSIGNSLCTLYAKCRDLESSVKAFMKIREKNVI 242

Query: 242 SWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSLS 301
           SWT ++SACGDNG+AAR L FF++MLSE VEPNE+TLTSVLS CCVMLTL +G Q+HSLS
Sbjct: 243 SWTGIISACGDNGEAARGLQFFSEMLSEDVEPNEFTLTSVLSLCCVMLTLGVGTQVHSLS 302

Query: 302 IKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAEDD 361
           IKLGY S +PIKNS+MYLYLKCG + EAQ LFEGMET++LITWN+MIAG+A+MMD   +D
Sbjct: 303 IKLGYESILPIKNSIMYLYLKCGQVKEAQTLFEGMETVSLITWNAMIAGYAQMMDLEGND 362

Query: 362 LAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLAD 421
           L+A++SG+ ALN+F KL+ S +KPDLFTFSS+L+VCS LVALEQGEQ HAQ IK+G L+D
Sbjct: 363 LSAYQSGNEALNIFSKLNRSDMKPDLFTFSSILTVCSSLVALEQGEQIHAQTIKTGFLSD 422

Query: 422 IVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRL 481
           +VVGTALI+MYNKCGSI +A KAFLEM +RTLISWTSMITG A+HG +QQALQLFEDMR 
Sbjct: 423 VVVGTALINMYNKCGSIEKASKAFLEMSTRTLISWTSMITGLAQHGKTQQALQLFEDMRF 482

Query: 482 AGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRVE 541
           AGV+PNQITFVGVLSACSHAG+VDEAL YFE+MQK+ +I+PVMDHFAC+IDM++RLGR++
Sbjct: 483 AGVRPNQITFVGVLSACSHAGMVDEALSYFEMMQKEYKIKPVMDHFACLIDMFVRLGRLD 542

Query: 542 EAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMYI 601
           EAF+ ++KM+ EP+E IWS+LIAGCRSHGN ELGFYAAEQLLKL+PKD E+Y+ LLNMY+
Sbjct: 543 EAFNFIEKMDIEPSEFIWSILIAGCRSHGNLELGFYAAEQLLKLKPKDIETYVLLLNMYL 602

Query: 602 SAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLLD 661
           SAGRWKDVS V+KLMKEEK+GKLKDWSWISIK KVYSFKPNDKSH Q  ++YK LE L+D
Sbjct: 603 SAGRWKDVSRVKKLMKEEKLGKLKDWSWISIKGKVYSFKPNDKSHPQNVDIYKSLENLID 662

Query: 662 EVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITMC 721
           E K LGYE ++ + V +E++   +  SS  YHSEKLAVAFGLLN P A  IRV+KN+ MC
Sbjct: 663 EAKSLGYESLETLMVTDEDEEKTSSSSSAHYHSEKLAVAFGLLNTPSAAPIRVMKNVIMC 722

Query: 722 RDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 765
           RDCHNF++ +SLLT REI IRDSK+LHK  NG CSCG FG LL
Sbjct: 723 RDCHNFVKIISLLTDREITIRDSKRLHKIVNGRCSCGDFGGLL 757

The following BLAST results are available for this feature:
BLAST of CmaCh12G001810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR32_ARATH2.3e-13437.10Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP172_ARATH2.9e-13435.42Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN... [more]
PP272_ARATH9.8e-13034.27Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
PP347_ARATH2.4e-12834.01Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN... [more]
PP373_ARATH5.0e-12635.86Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th... [more]
BLAST of CmaCh12G001810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRW6_CUCSA0.0e+0081.44Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372180 PE=4 SV=1[more]
W9RX12_9ROSA1.4e-30366.36Uncharacterized protein OS=Morus notabilis GN=L484_025549 PE=4 SV=1[more]
F6GZK5_VITVI4.8e-30166.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07970 PE=4 SV=... [more]
A0A061FF50_THECC2.8e-28562.53Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G... [more]
A0A067H144_CITSI4.8e-28562.65Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004369mg PE=4 SV=1[more]
BLAST of CmaCh12G001810 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11290.11.3e-13537.10 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G27610.11.7e-13535.42 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49170.15.5e-13134.27 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33170.11.4e-12934.01 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G09950.12.8e-12735.86 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CmaCh12G001810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088399|ref|XP_008444960.1|0.0e+0081.41PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucum... [more]
gi|700207652|gb|KGN62771.1|0.0e+0081.44hypothetical protein Csa_2G372180 [Cucumis sativus][more]
gi|778671898|ref|XP_011649704.1|0.0e+0081.44PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Cucum... [more]
gi|1009150316|ref|XP_015892955.1|0.0e+0069.46PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 isofor... [more]
gi|1009150318|ref|XP_015892956.1|0.0e+0068.94PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 isofor... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G001810.1CmaCh12G001810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 314..339
score: 0.024coord: 529..550
score: 0.002coord: 592..620
score: 0.3coord: 426..451
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 454..499
score: 5.0E-11coord: 138..185
score: 1.6E-8coord: 238..286
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 454..487
score: 2.1E-7coord: 241..275
score: 2.0E-4coord: 489..521
score: 4.6E-4coord: 527..550
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 351..385
score: 5.185coord: 386..420
score: 7.607coord: 555..585
score: 5.448coord: 421..451
score: 7.772coord: 589..623
score: 8.396coord: 138..172
score: 10.106coord: 239..273
score: 10.556coord: 523..553
score: 7.103coord: 487..517
score: 8.133coord: 309..343
score: 6.939coord: 452..486
score: 11.992coord: 208..238
score: 6.445coord: 107..137
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 110..270
score: 1.6E-7coord: 553..608
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 427..598
score: 7.21E-5coord: 559..612
score: 5.69E-6coord: 495..510
score: 5.69E-6coord: 86..145
score: 5.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 41..630
score:
NoneNo IPR availablePANTHERPTHR24015:SF779SUBFAMILY NOT NAMEDcoord: 41..630
score:

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G001810Melon (DHL92) v3.5.1cmameB158
CmaCh12G001810Melon (DHL92) v3.5.1cmameB170
CmaCh12G001810Melon (DHL92) v3.5.1cmameB185
CmaCh12G001810Melon (DHL92) v3.5.1cmameB186
CmaCh12G001810Watermelon (Charleston Gray)cmawcgB143
CmaCh12G001810Watermelon (Charleston Gray)cmawcgB152
CmaCh12G001810Watermelon (Charleston Gray)cmawcgB155
CmaCh12G001810Watermelon (Charleston Gray)cmawcgB174
CmaCh12G001810Watermelon (97103) v1cmawmB152
CmaCh12G001810Watermelon (97103) v1cmawmB164
CmaCh12G001810Watermelon (97103) v1cmawmB167
CmaCh12G001810Watermelon (97103) v1cmawmB174
CmaCh12G001810Cucurbita pepo (Zucchini)cmacpeB169
CmaCh12G001810Cucurbita pepo (Zucchini)cmacpeB180
CmaCh12G001810Cucurbita pepo (Zucchini)cmacpeB188
CmaCh12G001810Cucurbita pepo (Zucchini)cmacpeB193
CmaCh12G001810Cucurbita pepo (Zucchini)cmacpeB200
CmaCh12G001810Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G001810Bottle gourd (USVL1VR-Ls)cmalsiB164
CmaCh12G001810Bottle gourd (USVL1VR-Ls)cmalsiB169
CmaCh12G001810Bottle gourd (USVL1VR-Ls)cmalsiB189
CmaCh12G001810Cucumber (Gy14) v2cgybcmaB180
CmaCh12G001810Cucumber (Gy14) v2cgybcmaB301
CmaCh12G001810Cucumber (Gy14) v2cgybcmaB716
CmaCh12G001810Cucumber (Gy14) v2cgybcmaB722
CmaCh12G001810Melon (DHL92) v3.6.1cmamedB172
CmaCh12G001810Melon (DHL92) v3.6.1cmamedB203
CmaCh12G001810Melon (DHL92) v3.6.1cmamedB185
CmaCh12G001810Melon (DHL92) v3.6.1cmamedB201
CmaCh12G001810Silver-seed gourdcarcmaB0078
CmaCh12G001810Silver-seed gourdcarcmaB0558
CmaCh12G001810Silver-seed gourdcarcmaB0892
CmaCh12G001810Silver-seed gourdcarcmaB1140
CmaCh12G001810Cucumber (Chinese Long) v3cmacucB0204
CmaCh12G001810Cucumber (Chinese Long) v3cmacucB0210
CmaCh12G001810Cucumber (Chinese Long) v3cmacucB0222
CmaCh12G001810Cucumber (Chinese Long) v3cmacucB0229
CmaCh12G001810Watermelon (97103) v2cmawmbB162
CmaCh12G001810Watermelon (97103) v2cmawmbB165
CmaCh12G001810Watermelon (97103) v2cmawmbB166
CmaCh12G001810Watermelon (97103) v2cmawmbB199
CmaCh12G001810Wax gourdcmawgoB0198
CmaCh12G001810Wax gourdcmawgoB0219
CmaCh12G001810Wax gourdcmawgoB0223
CmaCh12G001810Cucurbita maxima (Rimu)cmacmaB035
CmaCh12G001810Cucurbita maxima (Rimu)cmacmaB200
CmaCh12G001810Cucurbita maxima (Rimu)cmacmaB179
CmaCh12G001810Cucurbita maxima (Rimu)cmacmaB187
CmaCh12G001810Cucurbita maxima (Rimu)cmacmaB207
CmaCh12G001810Cucumber (Gy14) v1cgycmaB0223
CmaCh12G001810Cucumber (Gy14) v1cgycmaB0225
CmaCh12G001810Cucumber (Gy14) v1cgycmaB0449
CmaCh12G001810Cucumber (Gy14) v1cgycmaB0856
CmaCh12G001810Cucurbita moschata (Rifu)cmacmoB200
CmaCh12G001810Cucurbita moschata (Rifu)cmacmoB166
CmaCh12G001810Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G001810Cucurbita moschata (Rifu)cmacmoB182
CmaCh12G001810Cucurbita moschata (Rifu)cmacmoB187
CmaCh12G001810Cucurbita moschata (Rifu)cmacmoB205
CmaCh12G001810Wild cucumber (PI 183967)cmacpiB176
CmaCh12G001810Wild cucumber (PI 183967)cmacpiB182
CmaCh12G001810Wild cucumber (PI 183967)cmacpiB195
CmaCh12G001810Wild cucumber (PI 183967)cmacpiB202
CmaCh12G001810Cucumber (Chinese Long) v2cmacuB176
CmaCh12G001810Cucumber (Chinese Long) v2cmacuB180
CmaCh12G001810Cucumber (Chinese Long) v2cmacuB192
CmaCh12G001810Cucumber (Chinese Long) v2cmacuB199