CmaCh12G001290 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G001290
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial transcription termination factor family protein
LocationCma_Chr12 : 529466 .. 534914 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTTTCTTTGCTCAAGAACTCCAGAAGTTTGCAGGGAACGACCCCACAATTTCCCGCAATTTCCTCTCTTCTCTGTCTAAAATCTCTGAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGATTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAATCTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCTGATACTGCCAGTATCTTTTGCAGACATCCTCATCTCCTCCTTGCCGATCCGGACACAATACTCAAACCTAAGATTGAGTTTCTCTCTCGAAATGGTTTCACCGGTCATGTTCTCGTCGACGTAATCTCTAGGGATCCGTCAATTCTTAGAAGGAGTTTGAAGAATCTGATTGTTCCGTGTATTGATTTTCTCAGAAATTTCTTTGGCTCTACTGATGGTATAGTCTCGCTCTTTTCTGCTAGACGTGGGACATGGGTTTTGCACAACTTTTCAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCTTGATTCGAACATCGCGAAGATGATTTGGGCGCGCCCGAGGACACTAGCAAGGGATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCCCGATGTTTACTTATGGGCTGTGTACGTTTTCAGTGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCTCAAGCAGCCCACGTTTATGTATTCGTCTGAAGAGCAAATAAAGAGAGCCTTGGATTTCTTTATGAACAAATTGGACTGGACGCACGAAGAAATTTCCAAGTACCCAAATGTACTTTATCTTAGTTTTGAAAAAAGGGTAGTTCCGAGGTCGTCTATTCTTCAGCACCTGATATCAAAAGGTTTTATCAAGAAGACAAGTTTTGGCAGAGCATTTTTGATTAGCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGATCCACATCTACTAGAGATGTACCAGAAGAAGATGGCAGTTCTATAAACGCTTGGAGTGCAATTCAGGTAATTCGTCTCTTCTGCAAAAACTGTGCACTTCACTTGTGAGAAGCTTGTAGGTTTGTGTAAAACTTATGAAATTTCACAGATCTTAGAACTGTTATTCACTGACAGAAGACCCGTGAAGAAGGTTATAGCATTTAGATCTTTTAGGAATGTTCCCACTTGCACGAGACTGCCTGCCAAGAATCAATGCTTAACTTTAAAAATTGATATACTTAAAATTATCCCCATAACATAGATGTCCCAATAAGAATTAACTACAATTTGGTTCATACTGCAATTAATTAACTTTTGGTGGGCCATTGGAGCTTCTGGTAGATTACACTGTCCTATTCTATTAGCATGTTTACAGTACGAGATCCAATAACCTACGAAAAATCATGTAACTATAAAGCTTTTGTAAATGAAAAAATGTGAGATCCCACCTCGATTGGAGAGAAGAATGAGTCTCAGCGAGGACGCTGAGCCCCGAAAGAGGGTGGATTGTGAGATCCCACATTGATTGGAGAGGGGAACAAAGCATTCTTTATAAGGGTGTGAAAACCTCTCTGTAGCAGACGTATTTTAAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGATGACAATATCTGCTAGCGGTGGGTTTGGACTGATACAAAAAAAAAAAAAAAATCTCGAGGAAATTGTAACGTCTCAATGCTTTAGTTTAGGAGATGTGCTATCCCCTGCTCTTTTTGTGGTTGCTGCTGATTGATCCAGTAGGCTGCTCATTTATGGTCAACATGCTTGTGATATTGGGAAAAATTCTATAGTTGGAAGTGCAACGTAAAGGTGAACCATATCTTTAGTATGAAACCATCTGGTTTGTAGAGGTGAAGACTTCGCAGAAGATAGTTTAGATCTTTGAGGCTTAAAAGTTAAAACCAAACTTTCTAAATGGTAAATGTCCGGAGTAAATTGGTGTAGAAGGACTTTTGAGACACAGACTCAAGTCTGGATTTTGTAATGGATCTTTTCCAATCAAATACCTTGGCCATTGAGATGGAACCCCATAGGTTAATCAAGAATGAAAGGATGGAGATAGAGAGGAAGTGCGATTTGAGCTATGAGAGGAATCTTGAAGGAAAATACTTTCCATATACAACATTTAAAGTTGTCTAGGTACTACACATCTCCCTATCAGCCACAAGTTCTTCCAAGAGTTAGAAGTGAAGGCTTTGTCCTCTAAATAGAGAAATTCTTCAGGAAAAAAGAAGCGGTTTCCTAACCAAAATGGTTAAACTGAATTCAAATAGAAGAATGAATAAGGTCGTGTTCTTTCCTTGATATCTAATTCCCTCCAAAAACTGACTGGAGACTATGAAAATCTATATGAGGGCAAGCCAGAAGATGGGGAATCCCCATTTGAAGCGGGCAAAAAGGCATTGAACACTGCTGAAATGATTCGGAATAGTAGTCTGTTGGTTAACTTTAATCCAAGATGGAGTTATATTTGTGAAAAGCTTTCTGATGATGACTTCATTGGAAGACAGGACACTTCGTACGTGTAGTCCACTAGACCTTTTGGGTGGGGTTTTCCTCTTCCTCCCTCTCTAGGCTGTCTTTTTTTTCGTTCTTTTGTTTATACTACAGTGTGAAAAGCAAAATGGAGATCTTAACTTCCTCTTTAATTCTGTCCTCTGGTGTGGAACCGTTGGTCTACACGCTAAAGGGTTGAGTTGGTGCCAACTTAGTTTGGCCTTCTCTTACTCTGCGAATGACCTCCAGTTACTCTCTTTCCAAGCCCACCCGCTAGCAGATATTGTCCTCTTTTGGGTTTCCCTCAAAGTTTTTAAAAAGCATTTGCTAGGAAGAGGTTTCCACATCCTTATAAAGAAGGATTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCACCCTTCGGGGTTCAATGTTCTCGTTGACACTCGTTCCTCCAATTGATGTGGGATCTCACAATCATGGCAAAGACGAAGGCTGAATACTATGAGTTAGGAATTATTGGTTCGGAAGGAGTAGGATAACTTTGGTGGGGGAGGCCGGATAGTTTAAATCAAAGAAATCTCTATTCTTGACACCCCACCATTTTTCTTCCAGATTCTCGTAATGGGACGCAAAACTTCAGAGTAGCATTTTTCTTCTTCCTCAGTGGTCTAAGATGTTATTCATCCAAGAACATGAACTTCCTGTTAGCAATGATATTGTAAATGGAAAATAACTCGTACAGCTGGCATTAAATGAGGAAAAGCCAGCTGTACCAATAAAAGGAAAATAAGTGTATATATATGAAATATGAAAAGACAGAAATATGAAAAGGCAGTGGGTAGGTCTGCTACCTACCAAAAAAAAAAAAAACTTTTTAACTCTTGTTGATGAGAGGCCAATAAATCGGAGGGAGGGGGTTGAACCAGGATGTTTTGAAATAAGAAGGAAAACAAAAAAGGGAACATTGGCAAGTGGCGAAGAAGCTGAAGAAGGAAAGAAAAGTCGCGGGAAGGAAGGAGCTGATCGTTGGATTTAACATCCATTGGACCAAATCGACTCGCTGTACCAAACCGCTCTGCCAGAACCGACCCGACCCGACCCAATTTGCAGATTCCGATCCACTACCCAAAACCAGACCCGAAGGTATGCATGACCCACGGTTCAGAGGCCAATGCTCGCAAATTTGTATTATTTTAACTCGAATCCTACTCAACTTCTATAGTTTTGATATATTTTCTCAATGTAGGACCTAATTGTAGATCTTTGAAGGAATTGGAAATTTGTTGAAGACCCGAAACAAGCTCGGGAAGTCTACAACAAGTAAGTAACCGCATGGAGCAAGTTCTAAGAAATGCTTATAGGAGTCGGTTTGGAGTATGGACAAATGATCTAGTATTATACTTACGAGTTTGGTTAACATTAGTTTCATGTATGGTACTTCGATATCGTGAGTGTTTATACCTTGATTATAGTTAGGGTTATATAGCTTCTGCTTGCATTATTGTGAATTTCTCTGATAGGCATTGGGTTTATGTGTTTTCTAGGAAGTCGAGATAGGTTGTTATTTCTTGATTTGCATGATAAGTATGATGTGAGCCTTGATACTTTGTTCTGCTTTGTTTTGGGGTGTGGATAGCCCATTATTGCTCATTTGTGAATTGGACCATTTTTCTATGTGCTAGATAGCGTGAATTATGAATTTCATAGATTATGAGTTACCGTCTTTTAGTTGTCACCTATTGTGGATATGGGTGGCCTTAGTAAGTATCCTACTGTAGTACCACGTCAGGGGTTCCTAGCGGGGAGAGCCATGGCCTTTTACTGATCTAAACCCGACCGGGGTGTAAGACAGGTAGTTTAATATGACCCATCCCGGCGGGGCGTAGTGACAGGTAGTTATTGATTCTCAGGAATAGGTAGTTAAGGCTAGACACCACTAGGGGAAAATCCACATATTTAAGCTCATTAGATAGTTAGGAATGGAAGAAAATCCATATCAATGAGAATCCATGGGGTCTTCTTTTGAGACCATAGTAGACTTTGCTAGAGATAGATTCGAGCATATAGCCAAAGTTTTCCGTGAATAGGATTAAGTCTGATAAGAGCCTACAAGAAGGTTGCTTACTGAGTATTTTTATACTCAACCCATGTTGTTGCTATTTTTCAGGTGTTAAGTAGACCAATGTCGGTGGCGGGAACGTGTGGAGCCGTGCGGCTATAGTGGAGACCCTTAGATCGAGTCCTCTTTGTCCATGTCGTTTTAATGTCATTTTGATGTTTATTTTGGGAAAACTTATGCTATTTTGTAACTGATTTTCTTTTGATGTGTTTCCGCGGATCCCGTTATGTTTTGGAATTATTTTGATTTTTAATCCTTATCAAATAGCTTTAATTTTATTGCGTCTCCCATTTTAGCAAATGAAAATGTTGTAAGGCTTTTTATCCTAGAGTCTACGTAGCGATTTGTGATTCGATGCATCGGAGAGCGGTCATTACATTCTTGATGACTACGTTCAAGTTGCTTCCAAGTTTAGAGCTGATACAGGGGTTGAATGTTTCCATACTGCCATGAACATTGTAAATGTGTAAATGTATCATCAATCCTTTTCTGTTACTTCTGCTACAGTTTGATTATCGTTTTGAATCCAACACAACATATATTTAGTTCGGTTTGACTTCGTGCATGTCTTGCGTTCTTGGTGATGAATATATTCTTTTTTCGGGAGTAAAACAGGCAAAATTTTGGAAAGTACAGGTTCTATGGCCATCAATTTCTGGCAGGATGATCTTTGA

mRNA sequence

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTTTCTTTGCTCAAGAACTCCAGAAGTTTGCAGGGAACGACCCCACAATTTCCCGCAATTTCCTCTCTTCTCTGTCTAAAATCTCTGAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGATTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAATCTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCTGATACTGCCAGTATCTTTTGCAGACATCCTCATCTCCTCCTTGCCGATCCGGACACAATACTCAAACCTAAGATTGAGTTTCTCTCTCGAAATGGTTTCACCGGTCATGTTCTCGTCGACGTAATCTCTAGGGATCCGTCAATTCTTAGAAGGAGTTTGAAGAATCTGATTGTTCCGTGTATTGATTTTCTCAGAAATTTCTTTGGCTCTACTGATGGTATAGTCTCGCTCTTTTCTGCTAGACGTGGGACATGGGTTTTGCACAACTTTTCAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCTTGATTCGAACATCGCGAAGATGATTTGGGCGCGCCCGAGGACACTAGCAAGGGATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCCCGATGTTTACTTATGGGCTGTGTACGTTTTCAGTGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCTCAAGCAGCCCACGTTTATGTATTCGTCTGAAGAGCAAATAAAGAGAGCCTTGGATTTCTTTATGAACAAATTGGACTGGACGCACGAAGAAATTTCCAAGTACCCAAATGTACTTTATCTTAGTTTTGAAAAAAGGGTAGTTCCGAGGTCGTCTATTCTTCAGCACCTGATATCAAAAGGTTTTATCAAGAAGACAAGTTTTGGCAGAGCATTTTTGATTAGCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGATCCACATCTACTAGAGATGTACCAGAAGAAGATGGCATGTGAAAAGCAAAATGGAGATCTTAACTTCCTCTTTAATTCTGTCCTCTGGTGTGGAACCGTTGGAAAACAAAAAAGGGAACATTGGCAAGTGGCGAAGAAGCTGAAGAAGGAAAGAAAAGTCGCGGGAAGGAAGGAGCTGATCGTTGGATTTAACATCCATTGGACCAAATCGACTCGCTGTACCAAACCGCTCTGCCAGAACCGACCCGACCCGACCCAATTTGCAGATTCCGATCCACTACCCAAAACCAGACCCGAAGGCAAAATTTTGGAAAGTACAGGTTCTATGGCCATCAATTTCTGGCAGGATGATCTTTGA

Coding sequence (CDS)

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTTTCTTTGCTCAAGAACTCCAGAAGTTTGCAGGGAACGACCCCACAATTTCCCGCAATTTCCTCTCTTCTCTGTCTAAAATCTCTGAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGATTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAATCTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCTGATACTGCCAGTATCTTTTGCAGACATCCTCATCTCCTCCTTGCCGATCCGGACACAATACTCAAACCTAAGATTGAGTTTCTCTCTCGAAATGGTTTCACCGGTCATGTTCTCGTCGACGTAATCTCTAGGGATCCGTCAATTCTTAGAAGGAGTTTGAAGAATCTGATTGTTCCGTGTATTGATTTTCTCAGAAATTTCTTTGGCTCTACTGATGGTATAGTCTCGCTCTTTTCTGCTAGACGTGGGACATGGGTTTTGCACAACTTTTCAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCTTGATTCGAACATCGCGAAGATGATTTGGGCGCGCCCGAGGACACTAGCAAGGGATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCCCGATGTTTACTTATGGGCTGTGTACGTTTTCAGTGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCTCAAGCAGCCCACGTTTATGTATTCGTCTGAAGAGCAAATAAAGAGAGCCTTGGATTTCTTTATGAACAAATTGGACTGGACGCACGAAGAAATTTCCAAGTACCCAAATGTACTTTATCTTAGTTTTGAAAAAAGGGTAGTTCCGAGGTCGTCTATTCTTCAGCACCTGATATCAAAAGGTTTTATCAAGAAGACAAGTTTTGGCAGAGCATTTTTGATTAGCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGATCCACATCTACTAGAGATGTACCAGAAGAAGATGGCATGTGAAAAGCAAAATGGAGATCTTAACTTCCTCTTTAATTCTGTCCTCTGGTGTGGAACCGTTGGAAAACAAAAAAGGGAACATTGGCAAGTGGCGAAGAAGCTGAAGAAGGAAAGAAAAGTCGCGGGAAGGAAGGAGCTGATCGTTGGATTTAACATCCATTGGACCAAATCGACTCGCTGTACCAAACCGCTCTGCCAGAACCGACCCGACCCGACCCAATTTGCAGATTCCGATCCACTACCCAAAACCAGACCCGAAGGCAAAATTTTGGAAAGTACAGGTTCTATGGCCATCAATTTCTGGCAGGATGATCTTTGA

Protein sequence

MTNFLFKVPLRFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHNFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFVMQYLSEDPHLLEMYQKKMACEKQNGDLNFLFNSVLWCGTVGKQKREHWQVAKKLKKERKVAGRKELIVGFNIHWTKSTRCTKPLCQNRPDPTQFADSDPLPKTRPEGKILESTGSMAINFWQDDL
Homology
[Close]
BLAST of CmaCh12G001290 vs. TrEMBL
Match: A0A0A0LQN0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402010 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.0e-143
Identity = 265/377 (70.29%), Postives = 302/377 (80.11%), Query Frame = 1 

Query: 1   MTNFLFKVPL-RFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKD 60
           M NFL K  L R +AQ+L+ FA N  TI  NFLSSLS+  +STN+RT+DYL+HT+G SKD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFL 120
           SALAAAK+IHLK +++PDSV+ALF AYGFT S TA+IFCR P LLLADPD  LKPK EFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180
           S+NG +G+ LVD+I R+P ILRRSL   IVPC DFL NFFGSTD IVSLF     T VLH
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 NFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMF 240
            FSE +APNIE+LRANGV DS+IAK+ W RP  L+RD + F+DIVEKTKE GFNPSS MF
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 TYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNK 300
             GLC  S M KD+WLSKLHIF S+GWS+EQFQS+FLKQP FM  SEE +KRALDFFMNK
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMNK 300

Query: 301 LDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFV 360
            DWT EEI +YP VL LSFEKRV+PRSSILQHLISKG IK+ S G A  ISE +FL KFV
Sbjct: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQKK 377
           MQYLSEDPHLLEMYQ+K
Sbjct: 361 MQYLSEDPHLLEMYQEK 377

[Close]
BLAST of CmaCh12G001290 vs. TrEMBL
Match: A0A0A0LK19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346010 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 7.9e-140
Identity = 268/385 (69.61%), Postives = 303/385 (78.70%), Query Frame = 1 

Query: 1   MTNFLFKVPL-RFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKD 60
           MTNFL K  L R FAQ+L+ F  N+ TI   FLSSLS+  +STN+ TVDYL+HT+G SK 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFL 120
           SALAAAK+I LK TA+PDSV+ALF AYGFT S  ASIF R P LLLA+PDT LKPK EFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180
           SRNG +G+ L DVI RDP IL RSL   IVPCIDFL NFFGSTD IVSLFS    T VLH
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 NFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMF 240
            FSE VAPNIE+LRANGVLDSNIAK++W RP  L+RD E F+DIVEKT+E GFNPSS MF
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 TYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNK 300
            +GLCT S M KDKWLSKLH+F SFGWS+EQFQS+FLK+P  M SSEE +KRALDFF+ K
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIK 300

Query: 301 LDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFV 360
            DWT E+ISKY  +L  S EKR++PRSSILQHLISKGFIK+ S G A    E KFL KFV
Sbjct: 301 WDWTWEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQ--KKMA-CEK 382
           M+YLSEDP+LLEMYQ  KKMA CE+
Sbjct: 361 MKYLSEDPNLLEMYQEKKKMALCER 385

[Close]
BLAST of CmaCh12G001290 vs. TrEMBL
Match: M5XIM3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018608mg PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.5e-87
Identity = 177/346 (51.16%), Postives = 229/346 (66.18%), Query Frame = 1 

Query: 34  SLSKISESTNNRTVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKAYGFTLSDT 93
           SL+ +S        DYL +TL F+ +SA   +K+IH +   NP  V +LF+ YGFT +  
Sbjct: 17  SLTTLSICDYPALTDYLTNTLAFTPESASQVSKKIHGRPPNNPYPVHSLFEHYGFTPTHI 76

Query: 94  ASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRSLKNLIVPCID 153
           A I    P  L A+P+  LKPK++FL++NG  G  LV  I+ +P IL RSL   I PCI 
Sbjct: 77  AKIITICPSFLWANPEKTLKPKLDFLAQNGIYGQDLVITITNNPRILERSLNKQIAPCIG 136

Query: 154 FLRNFFGSTDGIVSLFSARRGTWVLHNFSESVAPNIELLRANGVLDSNIAKMIWARPRTL 213
           FL++F GS   ++S FS +RGT V+  FS+S+  N E LR +GV  SNI KMI  +P   
Sbjct: 137 FLKSFLGSASALLSHFSVKRGTAVVLRFSDSMGANAETLRQHGVPHSNIMKMIACQPGIF 196

Query: 214 ARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQS 273
           +RD E FS IV + +E GFNP S MF YG+CT   M KDKW+SK  +  SFGWSE +FQ+
Sbjct: 197 SRDVEVFSKIVREVEELGFNPLSMMFIYGVCTLFSMTKDKWVSKFEVLKSFGWSEAEFQA 256

Query: 274 LFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLI 333
           LFLKQP  M SSEE++KRALDFFMNK+ W   +I KYP +L LSFEKRV+PR SILQ LI
Sbjct: 257 LFLKQPLVMRSSEERLKRALDFFMNKMGWGTSDILKYPVLLCLSFEKRVLPRWSILQVLI 316

Query: 334 SKGFIKKT--SFGRAFLISEDKFLVKFVMQYLSEDPHLLEMYQKKM 378
           +KG I K+  +  +AF+ +EDKF+ +FV  Y    P LLEMYQKK+
Sbjct: 317 AKGVITKSKKTTAKAFMQTEDKFVSEFVKGYEEHAPELLEMYQKKL 362

[Close]
BLAST of CmaCh12G001290 vs. TrEMBL
Match: A0A059AA44_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.4e-80
Identity = 152/350 (43.43%), Postives = 231/350 (66.00%), Query Frame = 1 

Query: 27  ISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKAY 86
           +S +  ++ +  + S      D L    GF  +SA A A  +  K     DS +A+F  +
Sbjct: 41  LSTSAAAAAAAAAPSEPRAVEDRLARAHGFPPESARAVAAAVDPKLAHKLDSFVAVFTGH 100

Query: 87  GFTLSDTASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRSLKN 146
           GF+ S+ A++  R+P  L ++P   LKPK++FL+ NG  G  LV V++ DP +LRRSL++
Sbjct: 101 GFSPSEVATVLLRYPRCLRSNPVKNLKPKLDFLAGNGVAGETLVHVLTNDPYLLRRSLES 160

Query: 147 LIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHNFSESVAPNIELLRANGVLDSNIAKMI 206
            + PC D L  FFG+    +SL   +RGTWVLH F++S+  NI+ LR  GV DS+I K++
Sbjct: 161 QLAPCFDCLVKFFGNRRDAISLLMVKRGTWVLHKFTDSMELNIDKLRQVGVPDSSITKLM 220

Query: 207 WARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHIFTSFGW 266
             RPRTL+RDA EFS+IV++ +  G +PSS MF YG+ T + MK+ KW +K+ +F  FGW
Sbjct: 221 TVRPRTLSRDATEFSEIVDEVRRMGLHPSSLMFVYGVITLAGMKRPKWEAKIAVFKKFGW 280

Query: 267 SEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPRS 326
           S+EQF+++F+KQP  M  SE+++++ L FFM++L WT +E++  P++   SF+KR++PR 
Sbjct: 281 SDEQFKAIFVKQPQIMNPSEKRMEQFLKFFMSELGWTADELTNCPSIFMASFKKRILPRM 340

Query: 327 SILQHLISKGFIKKTSFGRAFLISEDKFLVKFVMQYLSEDPHLLEMYQKK 377
           SIL  L+S+G +K+ S     L+SEDKFL KFVM+ + + P LL+MY+ K
Sbjct: 341 SILLFLLSEGLVKRQSLLGKLLMSEDKFLSKFVMENVGKAPQLLQMYEDK 390

[Close]
BLAST of CmaCh12G001290 vs. TrEMBL
Match: A0A059A9T0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.4e-80
Identity = 152/350 (43.43%), Postives = 231/350 (66.00%), Query Frame = 1 

Query: 27  ISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKAY 86
           +S +  ++ +  + S      D L    GF  +SA A A  +  K     DS +A+F  +
Sbjct: 41  LSTSAAAAAAAAAPSEPRAVEDRLARAHGFPPESARAVAAAVDPKLAHKLDSFVAVFTGH 100

Query: 87  GFTLSDTASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRSLKN 146
           GF+ S+ A++  R+P  L ++P   LKPK++FL+ NG  G  LV V++ DP +LRRSL++
Sbjct: 101 GFSPSEVATVLLRYPRCLRSNPVKNLKPKLDFLAGNGVAGETLVHVLTNDPYLLRRSLES 160

Query: 147 LIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHNFSESVAPNIELLRANGVLDSNIAKMI 206
            + PC D L  FFG+    +SL   +RGTWVLH F++S+  NI+ LR  GV DS+I K++
Sbjct: 161 QLAPCFDCLVKFFGNRRDAISLLMVKRGTWVLHKFTDSMELNIDKLRQVGVPDSSITKLM 220

Query: 207 WARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHIFTSFGW 266
             RPRTL+RDA EFS+IV++ +  G +PSS MF YG+ T + MK+ KW +K+ +F  FGW
Sbjct: 221 TVRPRTLSRDATEFSEIVDEVRRMGLHPSSLMFVYGVITLAGMKRPKWEAKIAVFKKFGW 280

Query: 267 SEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPRS 326
           S+EQF+++F+KQP  M  SE+++++ L FFM++L WT +E++  P++   SF+KR++PR 
Sbjct: 281 SDEQFKAIFVKQPQIMNPSEKRMEQFLKFFMSELGWTADELTNCPSIFMASFKKRILPRM 340

Query: 327 SILQHLISKGFIKKTSFGRAFLISEDKFLVKFVMQYLSEDPHLLEMYQKK 377
           SIL  L+S+G +K+ S     L+SEDKFL KFVM+ + + P LL+MY+ K
Sbjct: 341 SILLFLLSEGLVKRQSLLGKLLMSEDKFLSKFVMENVGKAPQLLQMYEDK 390

[Close]
BLAST of CmaCh12G001290 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 198.4 bits (503), Expect = 1.0e-50
Identity = 110/339 (32.45%), Postives = 190/339 (56.05%), Query Frame = 1 

Query: 46  TVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLL 105
           T++YL+ + G S DSA  A++++ L S   P++V+ L + +GFT +  +S+  + P LLL
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 130

Query: 106 ADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGI 165
           A+ +++L PK+ F    G +  +L   ++ DP+IL RSL N ++P  +FL++   S + I
Sbjct: 131 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKI 190

Query: 166 VSLFSARRGTWV-LHNFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIV 225
           V+  + RR TWV L + ++++ PNI  +   GV +  I  ++   P  + +   EF  I 
Sbjct: 191 VA--ALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 226 EKTKEAGFNPSSPMFTYGLCTFSVM-KKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMY 285
           ++ +E GFNP    F   +   S    K  W     ++  +GWSE+     F K P  M 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 286 SSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSF 345
            SE +I R +++F+N+++     I++ P VL+ S EKR++PR S+ + L+S G +K+   
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 346 GRAFLISEDK-FLVKFVMQYLSEDPHLLEMYQKKMACEK 382
             + L+  +K FL K V++Y  E P L+ +Y   + C K
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY---LGCTK 404

[Close]
BLAST of CmaCh12G001290 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 176.0 bits (445), Expect = 5.5e-44
Identity = 101/350 (28.86%), Postives = 176/350 (50.29%), Query Frame = 1 

Query: 26  TISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKA 85
           ++S+    +L K      + TV YLV + G S +SA + ++ + L S+  PDSV+ALFK 
Sbjct: 38  SVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKD 97

Query: 86  YGFTLSDTASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRSLK 145
           +GFT     S+    P +L   P+ ++ PK+ F S  GF+      +IS  P +L  SL 
Sbjct: 98  HGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLH 157

Query: 146 NLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHNFSESVAPNIELLRANGVLDSNIAKM 205
             ++PC D L++     + +V         + L   +  V+  + + R  GV D +I  +
Sbjct: 158 KRLIPCYDSLKSILVEEESVVKCLKRGIRCFSL-KITHCVSLRVSICRELGVPDKSIKWL 217

Query: 206 IWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHIFTSFG 265
           + A P T       F++++ +    GF+P    F + +  F    +     K  +F  FG
Sbjct: 218 VQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFG 277

Query: 266 WSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPR 325
           WS+E F +  ++ P  +  S+E+I   L++ +N +     +I   P VL LS EKR+ PR
Sbjct: 278 WSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPR 337

Query: 326 SSILQHLISKGFIKK--TSFGRAFLISEDKFLVKFVMQYLSEDPHLLEMY 374
           + ++  L+SKG +KK   ++     +   +F+ KFV++Y  E P L++ +
Sbjct: 338 NQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]
BLAST of CmaCh12G001290 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 146.4 bits (368), Expect = 4.7e-35
Identity = 95/350 (27.14%), Postives = 179/350 (51.14%), Query Frame = 1 

Query: 24  DPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDSALAAAKRI-HLKSTANPDSVIAL 83
           D  +S +  SS +  +  +N   V++L    GF K  A+A A R  +LKS   P SVI +
Sbjct: 19  DRALSLHHFSSNATPASISNPAFVEFLRDN-GFQKPLAIAIAMRYPNLKSLEQPRSVIQM 78

Query: 84  FKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRR 143
            K+Y F+ +        HP ++  + + IL+PK+ F    GFTG  L   +S++ S++  
Sbjct: 79  LKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGV 138

Query: 144 SLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHNFSESV--APNIELLRANGVLDS 203
           SL   ++P ++ L++        + +  +R G W+L +   ++   PNI  L   G++ S
Sbjct: 139 SLVKKLIPTVEILKSIVAPKHEDLPVILSRCG-WLLLSRDPNLFLLPNISYLETCGIVGS 198

Query: 204 NIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHI 263
            +A ++  +PR      E+    V +  + GF  +S M  + + + S + +  +  K+ +
Sbjct: 199 QLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKL 258

Query: 264 FTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVLYLSFEK 323
           F + G+SE++   +  + P  +  SE+++    +F++ ++    E ++K P VL  + EK
Sbjct: 259 FMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEK 318

Query: 324 RVVPRSSILQHLISKGFI-----KKTSFGRAFLISEDKFLVKFVMQYLSE 366
           RV+PR  +LQ L  KG +     KK +      ++E+ FL K+V+++  E
Sbjct: 319 RVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDE 366

[Close]
BLAST of CmaCh12G001290 vs. TAIR10
Match: AT1G61990.1 (AT1G61990.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 120.6 bits (301), Expect = 2.8e-27
Identity = 97/365 (26.58%), Postives = 166/365 (45.48%), Query Frame = 1 

Query: 44  NRTVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHL 103
           N TV YLV +LG SK  A + ++++  +   NPDSV++LF++YGFT S  ++I   +P L
Sbjct: 52  NFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLL 111

Query: 104 LLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRR--------SLKNLIVPCIDF- 163
           L+AD    L  K++ L   G +   + +++S  P IL +        ++K++IV      
Sbjct: 112 LVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGKKSITVYYDAVKDIIVADTSSS 171

Query: 164 -----------LRNFFGSTD-GIVS------LFSARRGTWVLHNFSESVAPNIELLRANG 223
                      +RN     + G+ S      L S  +      NF  S+   +E+     
Sbjct: 172 YELPQGSQGNKIRNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEM----- 231

Query: 224 VLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMK--KDKW 283
             D    K + A         +   + V   +  GF        +   T SV+K  K K 
Sbjct: 232 GFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKK-TPSVLKVSKKKI 291

Query: 284 LSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKLDWTHEEISKYPNVL 343
           L     F   G+S  +F  +  + P  +  S E +K+  +F + K+ W    +  +P V 
Sbjct: 292 LKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVF 351

Query: 344 YLSFEKRVVPRSSILQHLISKGFIKKTS----FGRAFLISEDKFLVKFVMQYLSEDPHLL 376
             S EKR++PR +IL+ L+SKG ++K S           +++ FL ++VM++    P L+
Sbjct: 352 GYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNELVPTLM 410

[Close]
BLAST of CmaCh12G001290 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-24
Identity = 70/267 (26.22%), Postives = 137/267 (51.31%), Query Frame = 1 

Query: 25  PTISRNFLSSLSKISESTNNR-TVDYLVHTLGFSKDSALAAAKRIHLKSTANPDSVIALF 84
           P  +++F S+++K S    +  TV YLV +LG +K  A   +K++  +   NPDSV+ L 
Sbjct: 32  PFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLL 91

Query: 85  KAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFLSRNGFTGHVLVDVISRDPSILRRS 144
           ++ GF  S  + I   +P LL+ D +  L+PK++FL   G +   +++++S  P+IL + 
Sbjct: 92  RSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKK 151

Query: 145 LKNLIVPCIDFLRNFFGSTDGI-VSLFSARRGTWVLHNFSESVAPNIELLRANGVLDSNI 204
            +  +    DF+++       + +S    ++G  +          NI +LR  GV    +
Sbjct: 152 GEESVSLYYDFVKDIMQDGKSLCISCPEGKKGNRI---------RNISVLRELGVPQKLL 211

Query: 205 AKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFTYGLCTFSVMKKDKWLSKLHIFT 264
             ++ +R + +    E+F + ++K  + GF+P+   F   L     M +     K++++ 
Sbjct: 212 FSLLISRYQPVC-GKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYK 271

Query: 265 SFGWSEEQFQSLFLKQPTFMYSSEEQI 290
             G+SE +  ++F K P F+  SE++I
Sbjct: 272 RLGFSEAEIWAIFKKWPYFLKFSEKKI 288

[Close]
BLAST of CmaCh12G001290 vs. NCBI nr
Match: gi|449442098|ref|XP_004138819.1| (PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus])

HSP 1 Score: 517.3 bits (1331), Expect = 2.9e-143
Identity = 265/377 (70.29%), Postives = 302/377 (80.11%), Query Frame = 1 

Query: 1   MTNFLFKVPL-RFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKD 60
           M NFL K  L R +AQ+L+ FA N  TI  NFLSSLS+  +STN+RT+DYL+HT+G SKD
Sbjct: 1   MANFLRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKD 60

Query: 61  SALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFL 120
           SALAAAK+IHLK +++PDSV+ALF AYGFT S TA+IFCR P LLLADPD  LKPK EFL
Sbjct: 61  SALAAAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180
           S+NG +G+ LVD+I R+P ILRRSL   IVPC DFL NFFGSTD IVSLF     T VLH
Sbjct: 121 SKNGISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLH 180

Query: 181 NFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMF 240
            FSE +APNIE+LRANGV DS+IAK+ W RP  L+RD + F+DIVEKTKE GFNPSS MF
Sbjct: 181 TFSEFMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMF 240

Query: 241 TYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNK 300
             GLC  S M KD+WLSKLHIF S+GWS+EQFQS+FLKQP FM  SEE +KRALDFFMNK
Sbjct: 241 INGLCIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMNK 300

Query: 301 LDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFV 360
            DWT EEI +YP VL LSFEKRV+PRSSILQHLISKG IK+ S G A  ISE +FL KFV
Sbjct: 301 WDWTREEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQKK 377
           MQYLSEDPHLLEMYQ+K
Sbjct: 361 MQYLSEDPHLLEMYQEK 377

[Close]
BLAST of CmaCh12G001290 vs. NCBI nr
Match: gi|778670382|ref|XP_004143080.2| (PREDICTED: uncharacterized protein LOC101214641 [Cucumis sativus])

HSP 1 Score: 505.4 bits (1300), Expect = 1.1e-139
Identity = 268/385 (69.61%), Postives = 303/385 (78.70%), Query Frame = 1 

Query: 1   MTNFLFKVPL-RFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKD 60
           MTNFL K  L R FAQ+L+ F  N+ TI   FLSSLS+  +STN+ TVDYL+HT+G SK 
Sbjct: 1   MTNFLLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKA 60

Query: 61  SALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFL 120
           SALAAAK+I LK TA+PDSV+ALF AYGFT S  ASIF R P LLLA+PDT LKPK EFL
Sbjct: 61  SALAAAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180
           SRNG +G+ L DVI RDP IL RSL   IVPCIDFL NFFGSTD IVSLFS    T VLH
Sbjct: 121 SRNGISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLH 180

Query: 181 NFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMF 240
            FSE VAPNIE+LRANGVLDSNIAK++W RP  L+RD E F+DIVEKT+E GFNPSS MF
Sbjct: 181 TFSEFVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMF 240

Query: 241 TYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNK 300
            +GLCT S M KDKWLSKLH+F SFGWS+EQFQS+FLK+P  M SSEE +KRALDFF+ K
Sbjct: 241 IHGLCTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIK 300

Query: 301 LDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFV 360
            DWT E+ISKY  +L  S EKR++PRSSILQHLISKGFIK+ S G A    E KFL KFV
Sbjct: 301 WDWTWEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQ--KKMA-CEK 382
           M+YLSEDP+LLEMYQ  KKMA CE+
Sbjct: 361 MKYLSEDPNLLEMYQEKKKMALCER 385

[Close]
BLAST of CmaCh12G001290 vs. NCBI nr
Match: gi|659068543|ref|XP_008444984.1| (PREDICTED: uncharacterized protein LOC103488160 [Cucumis melo])

HSP 1 Score: 498.4 bits (1282), Expect = 1.4e-137
Identity = 258/377 (68.44%), Postives = 297/377 (78.78%), Query Frame = 1 

Query: 1   MTNFLFKVPL-RFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKD 60
           M N L K  L R FAQ+LQ F  N+ TI    LSSLS+  +STN+RT+DYLVHT+G  KD
Sbjct: 1   MANSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKD 60

Query: 61  SALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFL 120
           SALAAAK+  LK TA+PDSV+ALF AYGFT S  ASIF +   LLLA+PDT LKPK+EFL
Sbjct: 61  SALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180
           S+NG +G++LV+VI RDP IL RSL   IVPCIDFLRNFFGSTDG+V LFSA  GT VL 
Sbjct: 121 SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 NFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMF 240
            FSES+APNIE+LRANGVLDSNIAKM+  RP  L+RD E F DIVEK KE G NPSS MF
Sbjct: 181 TFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMF 240

Query: 241 TYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNK 300
            +GLC  S M KDKWLSK+H+F SFGWS+EQFQS+FLKQP FM  SEE +KR LDFFMNK
Sbjct: 241 IHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 LDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFV 360
            DWT E+ISKY  +L LS EKRV+PRSSI++HLISKGFIK+ SFG A    E +FL KFV
Sbjct: 301 WDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQKK 377
           M+YLS+DPHLLEMYQ+K
Sbjct: 361 MKYLSKDPHLLEMYQEK 377

[Close]
BLAST of CmaCh12G001290 vs. NCBI nr
Match: gi|659089103|ref|XP_008445328.1| (PREDICTED: uncharacterized protein LOC103488393 [Cucumis melo])

HSP 1 Score: 496.5 bits (1277), Expect = 5.2e-137
Identity = 260/384 (67.71%), Postives = 299/384 (77.86%), Query Frame = 1 

Query: 1   MTNFLFKVPL-RFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKD 60
           M N L K  L R FAQ+L+ F  N+ TI   FLSSLS+  +STN+RT DYLVHT+G  KD
Sbjct: 1   MANSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKD 60

Query: 61  SALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFL 120
           SALAAAK+I LK TA+PDSV+ALF AYGFT S  ASIF +   LLLADPDT LKPKIEFL
Sbjct: 61  SALAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFL 120

Query: 121 SRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLH 180
           S+NG +G++L DVI RDP IL RSL   IVPCIDFL NFFGSTDG+V LFSA  GT VL 
Sbjct: 121 SKNGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLE 180

Query: 181 NFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMF 240
            FSES+APN+E+LRANGV DSNIAKM+  RP  L++D E F DIVEKTKE G NPSS MF
Sbjct: 181 TFSESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMF 240

Query: 241 TYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNK 300
            +G+C  + M KDKWLSK+H+F SFGWS+EQFQS+FLKQP FM  SEE +KR LDFFMNK
Sbjct: 241 IHGMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNK 300

Query: 301 LDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFV 360
            DWT E++SKYP +L LS EKRV+PRSSI+Q LISKGFIK+ SFG+A    E  FL KFV
Sbjct: 301 WDWTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFV 360

Query: 361 MQYLSEDPHLLEMYQ---KKMACE 381
           M+YLSEDPHLLEMYQ   KKMA +
Sbjct: 361 MKYLSEDPHLLEMYQETKKKMAIQ 384

[Close]
BLAST of CmaCh12G001290 vs. NCBI nr
Match: gi|1009119129|ref|XP_015876211.1| (PREDICTED: uncharacterized protein LOC107412900 [Ziziphus jujuba])

HSP 1 Score: 387.5 bits (994), Expect = 3.4e-104
Identity = 204/384 (53.12%), Postives = 265/384 (69.01%), Query Frame = 1 

Query: 1   MTNFLFKVPLRFFAQEL----QKFAGNDPTISRNFLSSLSKIS---ESTNNRTVDYLVHT 60
           M  FL K+PLR     +       A ++    + FL SLS +S    S+++ TVDY +++
Sbjct: 1   MFRFLSKIPLRLPQVAIFIIPTSNANSNAIGQQLFLKSLSTLSPPSSSSSDSTVDYFINS 60

Query: 61  LGFSKDSALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILK 120
           LG S DSAL AAK I  + TA  DSV+ LF+ YGF+ +  A IF R P LLL+DP   LK
Sbjct: 61  LGLSPDSALTAAKLIRRQPTAKSDSVLELFRHYGFSSAQIADIFSRFPSLLLSDPQKNLK 120

Query: 121 PKIEFLSRNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDG-IVSLFSAR 180
           PK+EFLS+NG +G  L+ ++S DP+IL RSL   I PCI FL+ FF +    IVSL S +
Sbjct: 121 PKLEFLSKNGISGQALLSIVSTDPTILLRSLNKQIEPCIGFLKTFFKNNKAEIVSLLSVK 180

Query: 181 RGTWVLHNFSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGF 240
           RGTWV+H FSE++APNIE LR++GV D+ I KMI  RP  L+R A++FS+ V   KE GF
Sbjct: 181 RGTWVIHKFSETMAPNIETLRSHGVSDACIKKMIIVRPAALSRFADDFSEFVRVVKEMGF 240

Query: 241 NPSSPMFTYGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRA 300
           +PSS MF +G+CTFS MKKDKW+SK+ +F  FGWSEE+ +SL +KQP  M SS E++ ++
Sbjct: 241 DPSSVMFIHGVCTFSGMKKDKWVSKMEVFKRFGWSEEEVRSLVVKQPKVMNSSSERLSKS 300

Query: 301 LDFFMNKLDWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISED 360
           LDFFMNKL W+ ++ISKYP VL LSFE+RV PRS IL+ LISKG I K   G  F++ ED
Sbjct: 301 LDFFMNKLGWSVDDISKYPTVLLLSFERRVFPRSIILKFLISKGHIDKKKMGSGFILPED 360

Query: 361 KFLVKFVMQYLSEDPHLLEMYQKK 377
           KFL  FVM+Y  + P LL+MYQ K
Sbjct: 361 KFLKNFVMEYEEKLPQLLDMYQSK 384

The following BLAST results are available for this feature:
BLAST of CmaCh12G001290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh12G001290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQN0_CUCSA2.0e-14370.29Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402010 PE=4 SV=1[more]
A0A0A0LK19_CUCSA7.9e-14069.61Uncharacterized protein OS=Cucumis sativus GN=Csa_2G346010 PE=4 SV=1[more]
M5XIM3_PRUPE3.5e-8751.16Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018608mg PE=4 S... [more]
A0A059AA44_EUCGR1.4e-8043.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1[more]
A0A059A9T0_EUCGR1.4e-8043.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00314 PE=4 SV=1[more]
BLAST of CmaCh12G001290 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.11.0e-5032.45 Mitochondrial transcription termination factor family protein[more]
AT1G21150.15.5e-4428.86 Mitochondrial transcription termination factor family protein[more]
AT5G64950.14.7e-3527.14 Mitochondrial transcription termination factor family protein[more]
AT1G61990.12.8e-2726.58 Mitochondrial transcription termination factor family protein[more]
AT3G46950.12.2e-2426.22 Mitochondrial transcription termination factor family protein[more]
BLAST of CmaCh12G001290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442098|ref|XP_004138819.1|2.9e-14370.29PREDICTED: uncharacterized protein LOC101219073 [Cucumis sativus][more]
gi|778670382|ref|XP_004143080.2|1.1e-13969.61PREDICTED: uncharacterized protein LOC101214641 [Cucumis sativus][more]
gi|659068543|ref|XP_008444984.1|1.4e-13768.44PREDICTED: uncharacterized protein LOC103488160 [Cucumis melo][more]
gi|659089103|ref|XP_008445328.1|5.2e-13767.71PREDICTED: uncharacterized protein LOC103488393 [Cucumis melo][more]
gi|1009119129|ref|XP_015876211.1|3.4e-10453.13PREDICTED: uncharacterized protein LOC107412900 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G001290.1CmaCh12G001290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 249..355
score: 1.8E-16coord: 81..233
score: 9.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 272..303
score: 15.0coord: 304..338
score: 66.0coord: 94..125
score: 0.0026coord: 203..233
score: 1500.0coord: 130..162
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 26..391
score: 1.8E
NoneNo IPR availablePANTHERPTHR13068:SF28MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATEDcoord: 26..391
score: 1.8E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G001290Cucurbita maxima (Rimu)cmacmaB192
CmaCh12G001290Cucumber (Gy14) v1cgycmaB0094
CmaCh12G001290Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G001290Cucurbita moschata (Rifu)cmacmoB192
CmaCh12G001290Wild cucumber (PI 183967)cmacpiB199
CmaCh12G001290Cucumber (Chinese Long) v2cmacuB196
CmaCh12G001290Melon (DHL92) v3.5.1cmameB157
CmaCh12G001290Watermelon (Charleston Gray)cmawcgB170
CmaCh12G001290Watermelon (97103) v1cmawmB149
CmaCh12G001290Cucurbita pepo (Zucchini)cmacpeB172
CmaCh12G001290Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G001290Bottle gourd (USVL1VR-Ls)cmalsiB185
CmaCh12G001290Cucumber (Gy14) v2cgybcmaB184
CmaCh12G001290Cucumber (Gy14) v2cgybcmaB719
CmaCh12G001290Melon (DHL92) v3.6.1cmamedB171
CmaCh12G001290Silver-seed gourdcarcmaB0185
CmaCh12G001290Silver-seed gourdcarcmaB0920
CmaCh12G001290Cucumber (Chinese Long) v3cmacucB0225
CmaCh12G001290Watermelon (97103) v2cmawmbB195