CmaCh12G000090 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGATCAGGCTAGGGACAAGAAGAAGGTTCAAGTCAAACACGTTGTTCTGTCCAACTCGCGTTCTTCTCTTGTGACCCATGCCTATTTGGAACGGTATTTCACGGACTCGCTCGGATTTCTTTTTAACTCCTTGCTCTCTTGTTCTCTCGCACCGGCCACTACAAACCCAAGATGCAGTCGCTCAACTTTTTTACCAGGACAGGTTTATTCGGCTGAGTCCGACGCAGGGATTCGAGCCCAGCGCTGAGCTTCGATGATGGAATGAAGGTCTTTATGCCTACTGAAATCTTCAAAAACAAATTCGCTGTCCATTTTGTAACGAGTGGATTTCTTAATTTCTCTTTTGTTTTCTCGTCCCTTTTTTGTGCATAATCAGCAAAGTTACGGAGCCTTTTTAATCGTTGATTCTGTGGTTGGATTTTGCTTGTCATTCCTTTATGATGACTCAGATGTGCTAATATTGTGGCCAGTTTTTGCCTGTCATTCTTGATTGGCTTACCTGAATCTCTACTTCGTATGTCTTTTATCTATAATTTTGATTCTCATTTAGCAATACCAAAACTGAGCTCTGCTCTCCGAGTCTTATCTGTGGCATATAGAAATGATATGAAATTTAATTTCGAAAGAATTCCAGAGGGGAGAGGGAAACCAAATCAGGGATTCGGTACTTCAAATTGATTTGAAACCAGGATCTTACACGTGACCCAGTGATGACCAAAAGAAGTATAGACGTCTCCAAGAATGAGCGAAATGATGTTCTGGAAGCTTTTAATCCTGCAATTTCTAAGTTTCTTGCGCAACTTTCTCAGAAGGTTCAAAATTCTATCAAGGTTGGTCATCTTAATTTCATTTGGAATGAATACTTTTAAAAACTTTTGTCTGTTGAATACAAATCGAGAGAGAATGAACATTTTATTATCACTAAACCTGTAAATTCTAGACTGGATTGAAATTTAATTTTGAAAAAATATTTTACATGATTTTATTTTATTTATTTATTTATTTCTGGTTGCAGCCTCAGCTTAAGGGACTAGCAAGTGATGGTCAGAAATTAACGTCAATGAACCCGTCCACAAAAGGGGAGAAGAAGGGGTCTTCTTCATCCTGGGAGTTTGATGTGGAGAAGCAACTTCAGGCATGGAGGGAGAACCCTTCATGGACGGATAAGCCTCCACAAATAAAGGTGCTTAATATCAGGATAGAAGGACGTGCTTTCCATTGTAGACCTGATGTTCATTCCTGTTGTGAACTTGGTGTTATAAATTTAAAAATGGCCTTGCAAGATCCCCCCCATTCATTTCATGAAGTGCACTGTCGATCAAGTGTTATGTGTGATGAATCTAAAATTAACATGGGCAAGCTTAAGCTCTCACTCTGGTTCAGTTCGGATTTCGTTAAATTGACCTGACCATTTCCATTTCATTGATCGAGTTTAAATGAGGCTCTTTGCAGGTTAGTGTACCAAAAGATACCCTTAGCAAACTCGATGTAAAGGTTGATGTTGGTTTGCCTCCGGATGCTGTCTATAATATTGTGACAGACCCTGATAACAAGAGAGTTTTCAAGAATATTAAAGTAAGTTACACATTTTCATTTACGATTCCATTCAATATTTTATTGATTGTCAGAATCAAACATTTGTACCACTCTTCTTTATTGGTTATCAAAACAAATCAATGATGTCATGGAAGTGAGGGGGGAACTATGGTCATTCATGTAGTCCTTCTAAATCCACATGCTTAACTTTGGCGCTGAGGTACATCTTTCGCAGTGTTCGAATCTTGGCTGGGTTTGGATGGGGAAAATAAATTAAATTCGAAAGCAGTTTGGAAGATGTAGTATTTTGTAAACTTGCTGAAAATTGTTAGTTTTTTTCCAAGTCTTTTAAAATGATAATTTCATCATGTGTTGTTTGTTTATTATAATTACCTTATTTCATTAATTCTTCTTCTGTAATATTTAAATTTTAGTGTAGTGCTTCCCATCAAAACTTGTAAATAAATTTTAGACTACATTATTTATAAACCACAAAACAAAAGAAATACAAGCTATAGTCTAGAGGCTTTTGATGGACACTCCAACAGAAAGTGTATGCCACACAAAATCACAAAACTATTTTTGGAATTCCTCAAACCTCTGTTTTCTGTCTATCCAGATACGTGCCGAAATACATATAAAATCAGCTATCGTTATGCATCCTGTTGTAGCTATACCATCTGCTGAGTTTAGAAAATTAATGTCTGTTTTAGGAGGTGATATCCAGAAGGGTTTTGATTGATGAAGGATCGAGACAAGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACCATTGCAGTTCACGTTCTAGTAGATCAAAACAGAGCAGATCACTCGGTAAGCACTTGGCACTTTCTTTTGCGCGCTACCTTTCAGTAGAATAAACAGACATTTCTAGGATATTTTGTAGGAAGCAAGCAGATTCTCAGTTTAGCGCAAGTAGGAAATGATATATGTATTTACTTTCAGTTCTTTATTTGAATATTTGCTTGTTCAATATGGTCATATCTTGTGACTTGGATGATGATTATCTGCCTCGCAATGAAAGATTGATGAAAAGGAAGTTTCTTGTTTCTTATGATCAATTCAATGATCTGGTTAGATGAAATTCAAGCAACTGAAGGCTGGATTTATGAAGAGATTTGAAGGCCGGTGGAGAGTAGAGCCTCTATTTGTTGATGAAGGAATGTGCATTCCGACAAAACCAAAGAATTTGGAAGATTGTAATGCTTGCACAAAGGGCAAAGGAAGAATCGGGTCAAGGGTGAGCCTGGAACAGCTTATCGAGCCGGCCATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACCACGAGGACAACGGAGATGCTCATTCTTGATCTCCTTGCTGAAGCCGAAAGGATAAGGGGAGATGTGAAAGATGAAGTTACAAACAAGGAGCTGCAAATTTCTCAGAGAATATGTGATAGCAACTCGTTAGATAGCGTTCTTGATATTAAACAAAGATGGGCCATCCGTAGGAGAAATGCGAAACAACGTGGTAGGACTAGGAGCTTCCTTGCTGCCAAATGA AGATCAGGCTAGGGACAAGAAGAAGGTTCAAGTCAAACACGTTGTTCTGTCCAACTCGCGTTCTTCTCTTGTGACCCATGCCTATTTGGAACGGTATTTCACGGACTCGCTCGGATTTCTTTTTAACTCCTTGCTCTCTTGTTCTCTCGCACCGGCCACTACAAACCCAAGATGCAGTCGCTCAACTTTTTTACCAGGACAGGTTTATTCGGCTGAGTCCGACGCAGGGATTCGAGCCCAGCGCTGAGCTTCGATGATGGAATGAAGCAAAGTTACGGAGCCTTTTTAATCGTTGATTCTGTGGTTGGATTTTGCTTGTCATTCCTTTATGATGACTCAGATGTGCTAATATTGTGGCCAGTTTTTGCCTGTCATTCTTGATTGGCTTACCTGAATCTCTACTTCGTATGTCTTTTATCTATAATTTTGATTCTCATTTAGCAATACCAAAACTGAGCTCTGCTCTCCGAGTCTTATCTGTGGCATATAGAAATGATATGAAATTTAATTTCGAAAGAATTCCAGAGGGGAGAGGGAAACCAAATCAGGGATTCGGTACTTCAAATTGATTTGAAACCAGGATCTTACACGTGACCCAGTGATGACCAAAAGAAGTATAGACGTCTCCAAGAATGAGCGAAATGATGTTCTGGAAGCTTTTAATCCTGCAATTTCTAAGTTTCTTGCGCAACTTTCTCAGAAGGTTCAAAATTCTATCAAGCCTCAGCTTAAGGGACTAGCAAGTGATGGTCAGAAATTAACGTCAATGAACCCGTCCACAAAAGGGGAGAAGAAGGGGTCTTCTTCATCCTGGGAGTTTGATGTGGAGAAGCAACTTCAGGCATGGAGGGAGAACCCTTCATGGACGGATAAGCCTCCACAAATAAAGGTTAGTGTACCAAAAGATACCCTTAGCAAACTCGATGTAAAGGTTGATGTTGGTTTGCCTCCGGATGCTGTCTATAATATTGTGACAGACCCTGATAACAAGAGAGTTTTCAAGAATATTAAAGAGGTGATATCCAGAAGGGTTTTGATTGATGAAGGATCGAGACAAGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACCATTGCAGTTCACGTTCTAGTAGATCAAAACAGAGCAGATCACTCGATGAAATTCAAGCAACTGAAGGCTGGATTTATGAAGAGATTTGAAGGCCGGTGGAGAGTAGAGCCTCTATTTGTTGATGAAGGAATGTGCATTCCGACAAAACCAAAGAATTTGGAAGATTGTAATGCTTGCACAAAGGGCAAAGGAAGAATCGGGTCAAGGGTGAGCCTGGAACAGCTTATCGAGCCGGCCATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACCACGAGGACAACGGAGATGCTCATTCTTGATCTCCTTGCTGAAGCCGAAAGGATAAGGGGAGATGTGAAAGATGAAGTTACAAACAAGGAGCTGCAAATTTCTCAGAGAATATGTGATAGCAACTCGTTAGATAGCGTTCTTGATATTAAACAAAGATGGGCCATCCGTAGGAGAAATGCGAAACAACGTGGTAGGACTAGGAGCTTCCTTGCTGCCAAATGA ATGACCAAAAGAAGTATAGACGTCTCCAAGAATGAGCGAAATGATGTTCTGGAAGCTTTTAATCCTGCAATTTCTAAGTTTCTTGCGCAACTTTCTCAGAAGGTTCAAAATTCTATCAAGCCTCAGCTTAAGGGACTAGCAAGTGATGGTCAGAAATTAACGTCAATGAACCCGTCCACAAAAGGGGAGAAGAAGGGGTCTTCTTCATCCTGGGAGTTTGATGTGGAGAAGCAACTTCAGGCATGGAGGGAGAACCCTTCATGGACGGATAAGCCTCCACAAATAAAGGTTAGTGTACCAAAAGATACCCTTAGCAAACTCGATGTAAAGGTTGATGTTGGTTTGCCTCCGGATGCTGTCTATAATATTGTGACAGACCCTGATAACAAGAGAGTTTTCAAGAATATTAAAGAGGTGATATCCAGAAGGGTTTTGATTGATGAAGGATCGAGACAAGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACCATTGCAGTTCACGTTCTAGTAGATCAAAACAGAGCAGATCACTCGATGAAATTCAAGCAACTGAAGGCTGGATTTATGAAGAGATTTGAAGGCCGGTGGAGAGTAGAGCCTCTATTTGTTGATGAAGGAATGTGCATTCCGACAAAACCAAAGAATTTGGAAGATTGTAATGCTTGCACAAAGGGCAAAGGAAGAATCGGGTCAAGGGTGAGCCTGGAACAGCTTATCGAGCCGGCCATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACCACGAGGACAACGGAGATGCTCATTCTTGATCTCCTTGCTGAAGCCGAAAGGATAAGGGGAGATGTGAAAGATGAAGTTACAAACAAGGAGCTGCAAATTTCTCAGAGAATATGTGATAGCAACTCGTTAGATAGCGTTCTTGATATTAAACAAAGATGGGCCATCCGTAGGAGAAATGCGAAACAACGTGGTAGGACTAGGAGCTTCCTTGCTGCCAAATGA MTKRSIDVSKNERNDVLEAFNPAISKFLAQLSQKVQNSIKPQLKGLASDGQKLTSMNPSTKGEKKGSSSSWEFDVEKQLQAWRENPSWTDKPPQIKVSVPKDTLSKLDVKVDVGLPPDAVYNIVTDPDNKRVFKNIKEVISRRVLIDEGSRQVVELEQAALWRFLWWSGTIAVHVLVDQNRADHSMKFKQLKAGFMKRFEGRWRVEPLFVDEGMCIPTKPKNLEDCNACTKGKGRIGSRVSLEQLIEPAIVPPPPISWYLRGITTRTTEMLILDLLAEAERIRGDVKDEVTNKELQISQRICDSNSLDSVLDIKQRWAIRRRNAKQRGRTRSFLAAK
BLAST of CmaCh12G000090 vs. TrEMBL
Match: A0A0A0LKF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348260 PE=4 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 2.3e-154 Identity = 286/339 (84.37%), Postives = 301/339 (88.79%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TrEMBL
Match: M5XCB5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008383mg PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 5.7e-121 Identity = 227/329 (69.00%), Postives = 264/329 (80.24%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TrEMBL
Match: V4TIX7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032036mg PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 2.5e-116 Identity = 214/325 (65.85%), Postives = 255/325 (78.46%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TrEMBL
Match: A0A061E653_THECC (Domain of Uncharacterized protein function isoform 1 OS=Theobroma cacao GN=TCM_010385 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 6.1e-115 Identity = 210/335 (62.69%), Postives = 262/335 (78.21%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TrEMBL
Match: A0A061E697_THECC (Domain of Uncharacterized protein function isoform 2 OS=Theobroma cacao GN=TCM_010385 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 6.1e-115 Identity = 210/335 (62.69%), Postives = 262/335 (78.21%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TAIR10
Match: AT1G70480.2 (AT1G70480.2 Domain of unknown function (DUF220)) HSP 1 Score: 380.6 bits (976), Expect = 1.0e-105 Identity = 197/323 (60.99%), Postives = 244/323 (75.54%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TAIR10
Match: AT1G23560.1 (AT1G23560.1 Domain of unknown function (DUF220)) HSP 1 Score: 279.6 bits (714), Expect = 2.5e-75 Identity = 143/311 (45.98%), Postives = 207/311 (66.56%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TAIR10
Match: AT1G23670.2 (AT1G23670.2 Domain of unknown function (DUF220)) HSP 1 Score: 167.9 bits (424), Expect = 1.0e-41 Identity = 101/242 (41.74%), Postives = 147/242 (60.74%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TAIR10
Match: AT1G23520.1 (AT1G23520.1 Domain of unknown function (DUF220)) HSP 1 Score: 167.5 bits (423), Expect = 1.4e-41 Identity = 91/244 (37.30%), Postives = 145/244 (59.43%), Query Frame = 1
BLAST of CmaCh12G000090 vs. TAIR10
Match: AT1G23690.1 (AT1G23690.1 Domain of unknown function DUF220) HSP 1 Score: 158.3 bits (399), Expect = 8.3e-39 Identity = 85/260 (32.69%), Postives = 152/260 (58.46%), Query Frame = 1
BLAST of CmaCh12G000090 vs. NCBI nr
Match: gi|449450642|ref|XP_004143071.1| (PREDICTED: uncharacterized protein LOC101212235 [Cucumis sativus]) HSP 1 Score: 553.1 bits (1424), Expect = 3.3e-154 Identity = 286/339 (84.37%), Postives = 301/339 (88.79%), Query Frame = 1
BLAST of CmaCh12G000090 vs. NCBI nr
Match: gi|659087193|ref|XP_008444321.1| (PREDICTED: uncharacterized protein LOC103487688 [Cucumis melo]) HSP 1 Score: 549.7 bits (1415), Expect = 3.6e-153 Identity = 282/339 (83.19%), Postives = 306/339 (90.27%), Query Frame = 1
BLAST of CmaCh12G000090 vs. NCBI nr
Match: gi|596142677|ref|XP_007222563.1| (hypothetical protein PRUPE_ppa008383mg [Prunus persica]) HSP 1 Score: 442.2 bits (1136), Expect = 8.2e-121 Identity = 227/329 (69.00%), Postives = 264/329 (80.24%), Query Frame = 1
BLAST of CmaCh12G000090 vs. NCBI nr
Match: gi|645230213|ref|XP_008221831.1| (PREDICTED: uncharacterized protein LOC103321776 [Prunus mume]) HSP 1 Score: 439.5 bits (1129), Expect = 5.3e-120 Identity = 225/329 (68.39%), Postives = 264/329 (80.24%), Query Frame = 1
BLAST of CmaCh12G000090 vs. NCBI nr
Match: gi|658034992|ref|XP_008353017.1| (PREDICTED: uncharacterized protein LOC103416549 isoform X1 [Malus domestica]) HSP 1 Score: 431.0 bits (1107), Expect = 1.9e-117 Identity = 217/327 (66.36%), Postives = 259/327 (79.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |