CmaCh11G017350 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G017350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRapid alkalinization factor
LocationCma_Chr11 : 11520110 .. 11520475 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAACAATGAAGCTCTACATCTTTCTCCTCCTCGTCTTTGTCGTCGTCATTCCACTCTCTTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAATTCTGAATACAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCGCCGACAACTTTTCCAATATGGATTCGCTTATAATAAGGAAGCTCGCAAAAGGTATTTGAGTTATTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAACGATCAATCCTTATCGTCGCGGTTGCGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

mRNA sequence

ATGGGAACAATGAAGCTCTACATCTTTCTCCTCCTCGTCTTTGTCGTCGTCATTCCACTCTCTTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAATTCTGAATACAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCGCCGACAACTTTTCCAATATGGATTCGCTTATAATAAGGAAGCTCGCAAAAGGTATTTGAGTTATTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAACGATCAATCCTTATCGTCGCGGTTGCGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Coding sequence (CDS)

ATGGGAACAATGAAGCTCTACATCTTTCTCCTCCTCGTCTTTGTCGTCGTCATTCCACTCTCTTTTGCCTTACATGAAACCTCCAACGCTTCATCCCTCGTTGACGATAATTCTGAATACAGCTTCTTTGGCGGAGACTCCTCTGAAGCCATGACTGAAGATAGTCGCCGACAACTTTTCCAATATGGATTCGCTTATAATAAGGAAGCTCGCAAAAGGTATTTGAGTTATTATGCACTTAGGCAGAATAATATCCCTTGTGGCCGTCGTGGTACCTCTTACTATGATTGCAAGAAGCGTAGAACGATCAATCCTTATCGTCGCGGTTGCGCTGCCATCACTGGATGTGCTCGATTCACCGATTAA

Protein sequence

MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFTD
Homology
[Close]
BLAST of CmaCh11G017350 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-15
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCA 111
           +E +RRQL          AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+  NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmaCh11G017350 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13
Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1 

Query: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAM--TEDSRRQ 60
           MG   L IF LL+  +V     A +  + +      N +      D  E++  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCI----NGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCAR 120
           L +          +RY+ Y AL++NN+PC RRG SYYDCKKRR  NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]
BLAST of CmaCh11G017350 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1 

Query: 29  NASSLVDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFAYNKEARKRYLSYYALRQNNI 88
           + S+ + D  +  + GG+  E    DS   RR L          A +RY+SY ALR+N I
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTI 114

Query: 89  PCGRRGTSYYDCKKRRTINPYRRGCAAITGCAR 119
           PC RRG SYY+C++    NPY RGC+AIT C R
Sbjct: 115 PCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmaCh11G017350 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1 

Query: 70  ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGC 117
           A K+Y+SY AL++N++PC RRG SYY+CK     NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]
BLAST of CmaCh11G017350 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.0e-09
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 1 

Query: 3   TMKLYIFLLLVFVVVIPLSFALHETSNASSLVD-----DNSEYSFFGGDSSEAMTEDSRR 62
           T  +Y  + ++ +V+     A+  T +    +D      +S +S   G  +E + E+   
Sbjct: 4   TRAIYAVIAILAIVIS----AVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEM 63

Query: 63  QLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCA 119
           + F    +    A+K+Y+SY A+R+N++PC RRG SYY+C++    NPY RGC+ IT C 
Sbjct: 64  E-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 119

[Close]
BLAST of CmaCh11G017350 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-23
Identity = 69/121 (57.02%), Postives = 79/121 (65.29%), Query Frame = 1 

Query: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLF 60
           M + KL +FLLL+ VV  PL  AL +    S    D  +Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 120
           QYGFAY K  + +YL Y ALR+NNIPC  RG SYYDCKKR+  NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]
BLAST of CmaCh11G017350 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 66/121 (54.55%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 4   MKLYI-FLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTE--DSRRQLF 63
           MKL +  LLLV  + I L  AL + + A      N +Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 122
           QYGFAY K  + +YL Y ALR+NN PC  RG SYYDC KRR  NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmaCh11G017350 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.1e-13
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCA 111
           +E +RRQL          AR+ Y+SY AL++NN+PCGRRG SYYDCKKR+  NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmaCh11G017350 vs. TrEMBL
Match: D7LGD9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902453 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-13
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCA 111
           +E +RRQL          AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+  NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmaCh11G017350 vs. TrEMBL
Match: M4EMR1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-12
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCA 111
           +E +RRQL +          +RY+ Y AL++NN+PC RRG SYYDCKKRR  NPYRRGC+
Sbjct: 35  SETNRRQLAR---------GRRYIGYDALKKNNVPCNRRGRSYYDCKKRRRNNPYRRGCS 94

Query: 112 AITGCARFTD 122
           AIT C RF +
Sbjct: 95  AITHCYRFLE 95

[Close]
BLAST of CmaCh11G017350 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-16
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1 

Query: 52  TEDSRRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCA 111
           +E +RRQL          AR+ Y+SY ALR+NN+PC RRG SYYDCKKR+  NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]
BLAST of CmaCh11G017350 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 75.9 bits (185), Expect = 1.9e-14
Identity = 50/121 (41.32%), Postives = 68/121 (56.20%), Query Frame = 1 

Query: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAM--TEDSRRQ 60
           MG   L IF LL+  +V     A +  + +      N +      D  E++  +E +RRQ
Sbjct: 1   MGVKMLLIFGLLILAMVAKSVNATYPLTKSCI----NGQGCIGEDDELESLMDSETNRRQ 60

Query: 61  LFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCAR 120
           L +          +RY+ Y AL++NN+PC RRG SYYDCKKRR  NPYRRGC+AIT C R
Sbjct: 61  LAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSAITHCYR 108

[Close]
BLAST of CmaCh11G017350 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 70.9 bits (172), Expect = 6.3e-13
Identity = 40/93 (43.01%), Postives = 53/93 (56.99%), Query Frame = 1 

Query: 29  NASSLVDDNSEYSFFGGDSSEAMTEDS---RRQLFQYGFAYNKEARKRYLSYYALRQNNI 88
           + S+ + D  +  + GG+  E    DS   RR L          A +RY+SY ALR+N I
Sbjct: 55  SVSAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTI 114

Query: 89  PCGRRGTSYYDCKKRRTINPYRRGCAAITGCAR 119
           PC RRG SYY+C++    NPY RGC+AIT C R
Sbjct: 115 PCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]
BLAST of CmaCh11G017350 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-10
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 1 

Query: 3   TMKLYIFLLLVFVVVIPLSFALHETSNASSLVD-----DNSEYSFFGGDSSEAMTEDSRR 62
           T  +Y  + ++ +V+     A+  T +    +D      +S +S   G  +E + E+   
Sbjct: 4   TRAIYAVIAILAIVIS----AVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEM 63

Query: 63  QLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCA 119
           + F    +    A+K+Y+SY A+R+N++PC RRG SYY+C++    NPY RGC+ IT C 
Sbjct: 64  E-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 119

[Close]
BLAST of CmaCh11G017350 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 61.2 bits (147), Expect = 5.0e-10
Identity = 36/110 (32.73%), Postives = 60/110 (54.55%), Query Frame = 1 

Query: 11  LLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLFQYGFAYNKE- 70
           +++ ++ +   FA   + ++   V   S+ +    + S +  E+     F+     N+  
Sbjct: 11  IIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEE----FEMDSEINRRI 70

Query: 71  -ARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCAR 119
            A  +Y+SY ALR+N +PC RRG SYY+C++    NPY RGC+AIT C R
Sbjct: 71  LATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]
BLAST of CmaCh11G017350 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-23
Identity = 69/121 (57.02%), Postives = 79/121 (65.29%), Query Frame = 1 

Query: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLF 60
           M + KL +FLLL+ VV  PL  AL +    S    D  +Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 120
           QYGFAY K  + +YL Y ALR+NNIPC  RG SYYDCKKR+  NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]
BLAST of CmaCh11G017350 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21
Identity = 66/121 (54.55%), Postives = 77/121 (63.64%), Query Frame = 1 

Query: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLF 60
           M +MKL +FLL++ VV  PL  A  +    +    +   Y F   +      EDSRR LF
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAAPN---YDFTTNN------EDSRRLLF 60

Query: 61  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 120
           QYGFAY K  + +YL Y ALR+NN PC  RG SYYDCKKRR  NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARFT 111

Query: 121 D 122
           D
Sbjct: 121 D 111

[Close]
BLAST of CmaCh11G017350 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-20
Identity = 66/121 (54.55%), Postives = 78/121 (64.46%), Query Frame = 1 

Query: 4   MKLYI-FLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTE--DSRRQLF 63
           MKL +  LLLV  + I L  AL + + A      N +Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFT 122
           QYGFAY K  + +YL Y ALR+NN PC  RG SYYDC KRR  NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]
BLAST of CmaCh11G017350 vs. NCBI nr
Match: gi|729376459|ref|XP_010549330.1| (PREDICTED: protein RALF-like 19 [Tarenaya hassleriana])

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-14
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 1 

Query: 1   MGTMKLYIFLLLVFVVVIPLSFALHETSNASSLVDD---NSEYSFFGGDSSEAM--TEDS 60
           MG   L++F LL   +V        E++NAS  +     N E      D  E +  +E +
Sbjct: 1   MGLKLLFVFALLTLAMVA-------ESANASWPLTKSCVNGEGCIGDEDGVETLMDSETN 60

Query: 61  RRQLFQYGFAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITG 120
           RRQL Q          +RY+SY ALR+NN+PC RRG SYYDC++R+ +NPYRRGC+ IT 
Sbjct: 61  RRQLAQ---------GRRYISYGALRKNNVPCSRRGRSYYDCRRRKRVNPYRRGCSVITH 109

[Close]
BLAST of CmaCh11G017350 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-14
Identity = 46/118 (38.98%), Postives = 69/118 (58.47%), Query Frame = 1 

Query: 4   MKLYIFLLLVFVVVIPLSFALHETSNASSLVDDNSEYSFFGGDSSEAMTEDSRRQLFQYG 63
           +KL +  LL+ + V+  + + H+ S     +   S   F G D+   M  ++ R+    G
Sbjct: 3   VKLCLIFLLLALAVVAEASSFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAGG 62

Query: 64  FAYNKEARKRYLSYYALRQNNIPCGRRGTSYYDCKKRRTINPYRRGCAAITGCARFTD 122
                   ++Y+SY AL++N +PCGRRG SYY+C+KR+  NPY+RGC  IT CARFTD
Sbjct: 63  --------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

The following BLAST results are available for this feature:
BLAST of CmaCh11G017350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF19_ARATH4.8e-1557.97Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1[more]
RLF4_ARATH3.5e-1341.32Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1[more]
RLF23_ARATH1.1e-1143.01Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
RALF_TOBAC1.6e-1059.57Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF22_ARATH4.0e-0932.23Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
BLAST of CmaCh11G017350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHU4_CUCSA1.5e-2357.02Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1[more]
A0A0A0KCD7_CUCSA2.0e-2054.55F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1[more]
R0HVQ3_9BRAS3.1e-1357.97Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1[more]
D7LGD9_ARALL5.4e-1357.97Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
M4EMR1_BRARP1.2e-1255.71Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
BLAST of CmaCh11G017350 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33775.12.7e-1657.97 ralf-like 19[more]
AT1G28270.11.9e-1441.32 ralf-like 4[more]
AT3G16570.16.3e-1343.01 rapid alkalinization factor 23[more]
AT3G05490.12.2e-1032.23 ralf-like 22[more]
AT4G15800.15.0e-1032.73 ralf-like 33[more]
BLAST of CmaCh11G017350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461879|ref|XP_004148669.1|2.2e-2357.02PREDICTED: protein RALF-like 19 [Cucumis sativus][more]
gi|659080853|ref|XP_008441015.1|1.2e-2154.55PREDICTED: protein RALF-like 19 [Cucumis melo][more]
gi|449466199|ref|XP_004150814.1|2.9e-2054.55PREDICTED: protein RALF-like 4 [Cucumis sativus][more]
gi|729376459|ref|XP_010549330.1|9.1e-1444.00PREDICTED: protein RALF-like 19 [Tarenaya hassleriana][more]
gi|1009109354|ref|XP_015889777.1|9.1e-1438.98PREDICTED: protein RALF-like 19 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G017350.1CmaCh11G017350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 53..118
score: 7.7
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 4..120
score: 1.9
NoneNo IPR availablePANTHERPTHR33136:SF9PROTEIN RALF-LIKE 4coord: 4..120
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G017350Cucurbita moschata (Rifu)cmacmoB117
CmaCh11G017350Cucurbita moschata (Rifu)cmacmoB133
CmaCh11G017350Cucurbita moschata (Rifu)cmacmoB143
CmaCh11G017350Cucurbita moschata (Rifu)cmacmoB161
CmaCh11G017350Cucurbita moschata (Rifu)cmacmoB156
CmaCh11G017350Wild cucumber (PI 183967)cmacpiB125
CmaCh11G017350Wild cucumber (PI 183967)cmacpiB141
CmaCh11G017350Wild cucumber (PI 183967)cmacpiB143
CmaCh11G017350Cucumber (Chinese Long) v2cmacuB128
CmaCh11G017350Cucumber (Chinese Long) v2cmacuB144
CmaCh11G017350Cucumber (Chinese Long) v2cmacuB146
CmaCh11G017350Melon (DHL92) v3.5.1cmameB098
CmaCh11G017350Melon (DHL92) v3.5.1cmameB140
CmaCh11G017350Melon (DHL92) v3.5.1cmameB144
CmaCh11G017350Watermelon (Charleston Gray)cmawcgB096
CmaCh11G017350Watermelon (Charleston Gray)cmawcgB101
CmaCh11G017350Watermelon (Charleston Gray)cmawcgB125
CmaCh11G017350Watermelon (Charleston Gray)cmawcgB126
CmaCh11G017350Watermelon (Charleston Gray)cmawcgB140
CmaCh11G017350Watermelon (97103) v1cmawmB114
CmaCh11G017350Watermelon (97103) v1cmawmB117
CmaCh11G017350Watermelon (97103) v1cmawmB127
CmaCh11G017350Cucurbita pepo (Zucchini)cmacpeB108
CmaCh11G017350Cucurbita pepo (Zucchini)cmacpeB114
CmaCh11G017350Cucurbita pepo (Zucchini)cmacpeB116
CmaCh11G017350Cucurbita pepo (Zucchini)cmacpeB136
CmaCh11G017350Cucurbita pepo (Zucchini)cmacpeB138
CmaCh11G017350Cucurbita pepo (Zucchini)cmacpeB154
CmaCh11G017350Bottle gourd (USVL1VR-Ls)cmalsiB105
CmaCh11G017350Bottle gourd (USVL1VR-Ls)cmalsiB116
CmaCh11G017350Bottle gourd (USVL1VR-Ls)cmalsiB127
CmaCh11G017350Bottle gourd (USVL1VR-Ls)cmalsiB153
CmaCh11G017350Cucumber (Gy14) v2cgybcmaB158
CmaCh11G017350Cucumber (Gy14) v2cgybcmaB295
CmaCh11G017350Cucumber (Gy14) v2cgybcmaB895
CmaCh11G017350Melon (DHL92) v3.6.1cmamedB106
CmaCh11G017350Melon (DHL92) v3.6.1cmamedB135
CmaCh11G017350Melon (DHL92) v3.6.1cmamedB151
CmaCh11G017350Melon (DHL92) v3.6.1cmamedB152
CmaCh11G017350Melon (DHL92) v3.6.1cmamedB157
CmaCh11G017350Silver-seed gourdcarcmaB0248
CmaCh11G017350Silver-seed gourdcarcmaB0405
CmaCh11G017350Silver-seed gourdcarcmaB0525
CmaCh11G017350Silver-seed gourdcarcmaB1113
CmaCh11G017350Silver-seed gourdcarcmaB1115
CmaCh11G017350Cucumber (Chinese Long) v3cmacucB0128
CmaCh11G017350Cucumber (Chinese Long) v3cmacucB0145
CmaCh11G017350Cucumber (Chinese Long) v3cmacucB0153
CmaCh11G017350Cucumber (Chinese Long) v3cmacucB0166
CmaCh11G017350Cucumber (Chinese Long) v3cmacucB0171
CmaCh11G017350Watermelon (97103) v2cmawmbB091
CmaCh11G017350Watermelon (97103) v2cmawmbB104
CmaCh11G017350Watermelon (97103) v2cmawmbB129
CmaCh11G017350Watermelon (97103) v2cmawmbB148
CmaCh11G017350Wax gourdcmawgoB0112
CmaCh11G017350Wax gourdcmawgoB0116
CmaCh11G017350Wax gourdcmawgoB0122
CmaCh11G017350Wax gourdcmawgoB0129
CmaCh11G017350Cucurbita maxima (Rimu)cmacmaB135
CmaCh11G017350Cucurbita maxima (Rimu)cmacmaB149
CmaCh11G017350Cucurbita maxima (Rimu)cmacmaB163
CmaCh11G017350Cucurbita maxima (Rimu)cmacmaB167
CmaCh11G017350Cucurbita maxima (Rimu)cmacmaB171
CmaCh11G017350Cucumber (Gy14) v1cgycmaB0221
CmaCh11G017350Cucumber (Gy14) v1cgycmaB0620
CmaCh11G017350Cucumber (Gy14) v1cgycmaB0684