CmaCh11G017130 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G017130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Unknown protein
Location	Cma_Chr11 : 11338993 .. 11347870 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGATCCTCAAGCTTTGTTGTGTTTCACTTTCATCTACATTGTCTTCGCCGGCGCCGGAGCTCAGTCCCCTTCCACTCCTCCCACCGCCACTCCTCCGCCTGTTTCATCTCCCCCTCCAGCCACTCCTCCGCCTGTTTCATCTCCCCCTCCAGCCACTCCCCCTCCTGTCTCACCTCCTCCTCCGGCATCTCCTCCTCCAGCTACTCCGCCTCCAGCAACCCCACCACCTGCGCCGTTGGCATCCCCACCAGCAGCAGTCCCGGCTCCTGCACCCAGTAAGAAGAAGTCAAAGGCAGCTTCATCACCATCGCCACTGTCGAGTCCACCCGCACCATCAGCTGAGGCCCCAGTACCCACCAGCTCCGATTCTCCCACCCCATCTCAAAACGACAATGTAAGTAACTTACAAAATTATAATTTTTAGTTTGAACACGACTCTCCACAATAGTATAATATTGTCTATTTTGAGCATAAGCTCTCACAGCCTCGTACCAATGTACCAATGAATAGAGTATTCTTTGATTATAAACTCAAGGATCATTCAGTAAACCAACGCGCCTTTAAAATGAGTGAGTATTAATGGAAGGGTGATTGATAATTGCAGAGCGGAGCAGTGGAGACGATGGTGGGGAGGATGGTGATGCTTGGAATGGGATATGTATTTATGATGGTGTTAGGGTGAGGAGTGGACATTGTTGATATGTGTTTTGGTTGTGCAGAGCCCCCATTTTTGGTGTCTGTGTTCCCTTGGGCTGCTCTATATTTCATTTCATTTTTACTATTATTTGCCCCTTTCTTTTGTTTGGGACTTTATTTTCTTTTAATTTACTACCCTTTGGTCTCTCTCTCTCTATATATAAATACCCATTTGCTTGGATTCTTTTGTGGCAAAGAAACTAGAATCTTAGACTAAATCAAACAAATACTTTGCATGAAAAAAATAAAGTTCTTGATGGAAATAAGATATTTTCAAGAACTGAACGGTGGGAGGGTGACCAAAATCCTATTTTGTTTAGAGTGGATATATAAGTTGGAAGAAACAACGGGAAGTTCGTGGATATATAAGTTGGAAGAGCAATATCTCTATTGATATAACACATTTTAAATGAAGCCAAAAGCAAAGTCATGAGACTTGCATCTAAAGTTGTCATCGGAAAAGCGATCAGAAGTTCAAGCTTTTTGGAATTTGGTAGATCTCCCATTTTAGACATCTACAAGCCACAAGGCACACCTGCAGTGAGCAGCTTTTTCGACTCTGCGGCTCGAATCGACTCGGCTGGTCGTTTCAATGCAGTATTTCACATATGTCAGTTGAATTATTATTAAATTGTGAAATACTAATGGAAGGTAACGAACAATCTAATAGAAAACGAACTCCGGTGATGTTTGAAGTAGCTTTTGAGGAACGGGAGCTAACGTATATTAATTTAGGGAGAACGCTAGCTAAGATCAACTAAGTGACCTTACTATAGATTAGATACTTGTTTGTTGTATGACGACATGTGCCAGTAGCACTGACACATGTCCTGTATGCTTTATAATTATGACGTATGATGTATGAGTTATATGATGATTTATGATGATGCTTTATGATGTACTTGGCGATGTATGATGATGATGCATGCCGATGACGTGTTATGATGGTTATGATGTATTTGACGATGTATGATGATGGTGTATGACAATGACGAAGCATGATCATAATTCCTTAAATGATGACGCTGCTTCCATATTAAGTTAAGATGCATATTATGAATGACATTGCATTATGTCGAGAAATTGACCTAGGACACAACCCTAAAAAAGATTAATGATGATGTTAAGATGGATAGTTAACGCACATGTATGACTAATAGGATGAAACTAGGGTTGTGACAAAAAGACGTTTCAAAGAAAAGAAAATTAGAGGGACCTTATGCATTTTTGTATGTACACAAGCATCGAAACACTTCCCTTTTTCATGATGATGAGTACGGACGCGTACGCTATGATGATGATAGTGATCATGTTGAGCATGACACTCAGGGGTCTGCTGACCTCCGACGTCGCTACGAACAGCTAGCTCAACGATGATGGGTATAGATGGGGTGCGAACCGTCTGGAGATTCAAACTCGCACGTGTGGGTCGTGTGCAGAGAAGTGTTACACATCCAAGTTAGTCTGGAATGGAGACCACCCCTATGTTGATTTAATGATAGGTCCCTAGAGGATTGTGGCATGTATTTGCATTTTCACGGCCCATATAGTGGGGTCACTTATTGAGTATTCTTTAAAATACTTAGGCCGTATGTTACATCATTTTTTAGGTAAAGGCAAGAAGGTCATGTACGGTTGACGATGATATCACAAAGTAGAGACCATGATATGTGCATAGTATAGAAATATATTTAAATTCCTAGACTTAGATTAGAATGGGTTGTTTTGCATTTCATATTTTTCAATTATTTCATTATCATTTTTAATTTCATTTTTGAACTAGGTGTTAAACACGTAAGACCATGGGGTGTTTTCAATGATTGAATTTTGTTTTATCTCGAAATTTATTACTTAAATGATGACGTTTTAAGAGTTAGATTTAGCATATGAGCTTAGACTAAGATGACAATAGCGACTTTAGGTAGCTGAAATCTAGGGTCGTTACTACAGTCACCGAAAAACGTGTGAGAATTCCAGCAAGAGGTCCGAATTCTCGCACCCATCTCGGTCTCACACCCCTCCGATGCTCTCGCTTTGCCAAGACAACCCACACCCTTCTGCCATACACTCTTAGACGCCTTGCAAGGAGGAAAGACAGAAAAACAATAGAGAGAGAGATAGATCCAAAAACGCTACGACGAGACGAAACCCATAGATCCGATGTCGAAACAAACCTACCCACGCTGTGAAAGGAATCATCGAGGACTGTACACACGAAGAAGGTAAGCTTTCACGCCTTAACAACGTGATTTGTTGTTGGAAAATAGAGTTCAAGTTTTGGATTGGTTGGCCCTCACGGATCTGTGTTTTAGGTGCTTACCATCCATAAAACTACGTTGCAGGTGAAGAGGAAGGAGAAAGGACGAAGAACCGAAGGAAAACAGCGAGAAATGAACGTTGAAACGACGTTTCAGAGGAGAGAGAAACCCATCGAGAAATTGTGAGAAGTCGAGTGAGGAAGATAAGATCCAACGGATATGGAATTGTGAAAAACTAATGAAAATCGATGAACGGCCTAATAGGAAACGACAATCGGCGATAGTTTGGAGAATTTTCGAGGAACAGGAGCTAACGTACTCAAATTAGGGACAACGTCGACTAAGGCCAACCAAGTAAGTGATCCTACCATCGTTTGGTTATAATTGTGTGTTGCATGATGACACGGGCTCGTGACTTCGCACGTGTCATAGGTCTGTATATGCAAGCTGTTATGAAATGATATGTAAATGTTATGTGAATTGATTGTTATGCTGTATTTGATGAATTGATATGTTTTACAATATGTTGACGAAATGCTCGAGATTGTTATGTGACTATTATGATATATGATACGATATCTGCACGATATGAATTGTTAGGTTTTAAAACATGAAAAATTATGATATGATTGATATGTAACATAAATGATATGTTATGATTGACATGTAAAACGACGTACTAATATGAAATACAACTTCAACATACGCATGTAAATTATGATAAATGATATGAGAAACGATATGAAAATTATATGTTTGGAGGTTTTAGCAAACATTCTCAGTAACGATGTTGAGGAGCGTAAGGACAAAATGACTCTTGCCGCCATCTACCAAGCAGTTCGGGAGGACGTCCTTCTCAAATTGGACTACAATTCAATTTGGTTCAACATACATCCGGATATTTTATTAAATTTAAAGAAAATGTATATTTTAATATATTAGATATTAAATATATTTTTTAAAATTTGAAAAATATTTCTCTGTCTTTAAAAATATTTCCAATGTTGTGGGTTAATTTTAGGACGTATGATTTGGTCTAAAGTTAGTGTAAGCGGACCGAGGATTTTGTTGTTACTAGGAACCATTCAATGTAAGATACGTTCCAGTTTTTAAACTATTAGAGATGTGTGTTAGGATCGCACATCAATGCACACAATGAACATAAAAAATAGGAGAGAGAAAATGCAAGGAGGAATATTGACTAAATGTTTATATTAATGATTTTAAGTGTATAATAAAAGAGAATATAAAGAATTGCGAAGTACATTTTCAAAACATTGGGTAATGAGGTATATATATATATGCTTCAATTTACTATGTACAGTTCTACTGATATAACTATCTACTATATACATCTATTTACTATCATGTATAATTCTACCGATATAACCATCTACTATATACGTCTATTTACTATCATGTACAGTTCTACCGATATAACCATCTACTATATACGTCTATTTACTATCATGTACAGTTCTACCGATATAACCATCTATTATATTCGTCTATTTACTATCATGTACAGTTCTACCGATATAACCATCTACTATATACGTCTATTTACTATCATGTACAGTTCTACAGATATAACCATCTACTATATACATCTATTTACTATCATGTACAGTTCTACCGATATAACCATCTACTATATACATCTATTTACTATCATGTACAGTTCTACCGATATAACCATCTACTATATACATCTATTTACTATCATGTACAGTTCTACCGATATAACCATCTACTATATACATCTATTTATTATCATGTACAATTCTACCGATATAACCATCTACTATATACATATATTTATTAGAGATAGTTTGGTCGAGATATAACTTTTTTTTTTTTTAATGGTTGTTTACTATTTATGAACATTTACTTTCATTTATAGTTTTACTATTTATAACAATTGTATAACAATTGAAATTATAGTTAGTCTATTATTTATGAACATTTACTTTCATTTAACATACGTAGCTATAAATAAGCCTGAGACTAACCTAAAAATTCTCGAGACATATCGAACCCAATTGAATAAACTAAAAATAAGCAACATATGTGATTTGTTTTTTAATGATAAACTGGGTTCTAACTGTATGATACTTTGACCACTTGTATAAACAATTTTCTTGCATGGCTTCTTGCTTAATTTTTCTAGATAGTCTATCATCCATATCATCTTCTTTCAACAACTTCAATTATTGTCATGTGTCATGTACTCAGCCTTACTAGATGAAAGAACAAGACAATTCTGAAGTCTAGATTATCCAACTCATCTCATCATCCATGACTTACTTCTGTTGTATCTTTCGACTATATGGCATCATCAAAAGATTCTTGTTCCCTTTCATCAGTCAACAACATATACTGTAATGAAGGTACAACATATCTGGTACTCTGATAGTTTTTGATGATCTTTTCAACATATACTCAAGTGTCACTTGTTCCACCTATGGATCCTAAACAACAGTCTCAGAAGTTTCATGAGTATCTGCTATAACATCACTAGGTGAATTTTTTCGCAACTCGACCTCGACCTCAACTCCCACTTGCTTTACTGTCTCAAAACCTTTCTTCTCTTTGTTCTTGTACAAGACATTTTCATCAAAATTTACATCACAATGTCTCAGGAGTTTTCTGTTCTTATCATCCCAAAACTTGTACCCGAACATGTCAGAATTGTAGCCTATGAAGTAGCACTTCAGAGCCTTTGTTTCAAGCTTGTCACTCTTCTCTAGATCAACACGAACATACACAGTGTAGCCAAAAGTTCTCAAGTGAGAATACTTTAGTTCTTTTCTTGTTCATACCTCTTCTGGCAACTTGACCTCAAAGGGTTCTAACAACCCTCTATTGATCAAGTAGGATGATGTATTTACAACATCGTCTCAAAATGTCTTTGGTAGTCTAGAATGAATCATCATACTCTTTGCTCGCTCATTTAATGTTTTGTTCATCTTTTCAGCAACATCATTTTATCTTACTTTATTGGGAACTATCTTTGTCAATCTAATTCTCTTAGTTGCACAAAATGCTTTAAATTCTAACTTATCATACTCTCCTCCATTGTTGAACTTCAAGATTTTGATCTTCAAGCCGGTCTGATTTTCAACTTCAACTTTCCACTTCTTGAAGGTGGCAAACAGATCTAACTTGTGTTTCAGAAAATAAACTTATGCCTTCCTGCTGAAATCATTTATGAAGGTGATGTAGAACTTGATCCACCAAGTGATGGAACTAAAGATGGTCCCCAAATGTCTGTATTACCATTTTCAATCGCACTTTTTTCGATTCTCTAACAACCTTTGTGAAGCTAACTTGTTTCTATTTGAGCATAACGCAGCTGTCACAAAGACCAATTTCTACAAACTTTATGCGTTCTAAACTCCTTTTGCAACCAGCATCTTCATTCCTTTGACGATCATATGTTCATTTCTATTATGCCATAGACTTGAATATGAATCACTCTTAGCAACAACATACATGTTTTATACACCTGCAACGGAGTATAAGGTTCCAAATTTTGTGTCACATGCTACCACCATAACACCATTCACAATCTTCCAAGAACTATTCTCAAACTCTACTGCATGTGCTATTCAACTAACCAATAGAGATTAAGTTCTTTTTGAGACCATAAAAATATTTGATATTCTTTAATGTCCATTGATTTTCGGCTTGAGTTTGTATGTTGGCATCCCTCTTCCCTTCAATATTAAAGATTTTTTCTTTTGTCGACAGATATACTTTTATGAAATTTTTTTAGTTAAAATTTCGAAACAATTCCGTACTTGGAGACGAATGAAACGATACACCTGAATCCAAAATCTAAGATTCAGTCGGGCTATCCACACTAGGGATTAAAGCATCTTCAATATCTTCTGCTGAATATATAGAATCATCATCATCTACAGATTTGTGATTTTGTTTCTTTTTCTATTTTCTACAATCGGTTCGAAATGGCTATTTTTGTCCACAATTCTAACATGTTACATTTGGTCGAGATTTTCTCCGATTCTTTGATTTTGATCGGACATTTTGTTTGGACCTTTTGATTTATTTCTTCCCCTTCGATCAACATTGAGAGCGTTTCCTGATGAATCCTTAATTTCTCGTTTGCGAATACTTTCGCTAAGAACTAGATCTCAAATTTTATCGAACTTTAGTTTCTCAGATCTCTGAGAACTGTTGATCATAGTAACTACAGTATCCTAAGACTTGGGTAAGAATGACATCAAAACCAGTGCTTTAATTTCATCTTCGAAATTAATTTTCACTGAGCTTGATTGACTTAAATCATATCAAATTTATATATATGATCTGCAACATATCCATCTTCATACATTTGTAGATTGAATAATCACCGCATCAAATACACCTTATTCATAACCGACTTTCGTACATATTCGACAACACCTTCAATAGATTTGATGTTGTCTTCTCCTAAATGATGCTGAACACCAAGTTTCTTGACAGCATTAATCAGATCAACCCTAGGGTCTGTCGATCCTTGAACTTTCACTGCTCCGTAGTCATGGTATCCGGCTTCACCTCTGACAAAAGTTCGTGAAAATCTTTCTGGTACAGATAATTTTCAATCTACATCTTCAAGAAACCAAAATCAGATCCATCAAACTTCTCAATTCCAATATTTGAGTTTTCCATCTTCACAGATCGTGGTGAATCTCGCCTAGCTCTGATACCAGTTGTTAGGATTTCACAACAGCAATACACTCAATTTTGATGAACACAAAGAATAGGAGAGAGAAAATGCAAGGAACAAGATTGACTAGAAGTTTATATTGATTACTTCAACTGTGTATAATAAGAGAGAATACAAAAAGTACATTTTCAAAGCATTGTCTAATAAGGTATGTATATGATTCAGTTTACTACTATATATAACTATCTACTAGATATAGTACCGTTTTTACTAGTTATATGACAATTTACTTTATATGTCATTTACCATATATATATAACTTTACTATGTATAACCATTGAATAAGGTATAAATAAGCAGCAAACTCCATAACCTAATAATGTAGGCATGTGATTGTTATGTGATTTATGTGTTTGATGTGCATCACCAAATGCTTTTACAGTTATACGATCTCTTGCATGCTTTGAATGAAATGGTCTTTGTTAAATAAATTTGTGACAATTATATGTCAAGTATATGAATTAGTTGTAACTCCAAAGATATAGACTAGTTGTCCCACATTTTTGTTTTTGGTCATAGGTTGGTTGGGGCAAGGTTTCAATTTTACATACCACCATCTAGGTGGTCATGTTTTGCATATGGTCTCAAGTTGGTTGATCAGTGCTTCCCGGTCTAGATAGAGGTACATGTTGGTTATCCTATCTCAAGCAAGGTTACAAGATGGTTGACCCCTTTTTTAACGGTTTTAGGTTCCTTGATTAACTTTCAAGTAAGGGCGTGCAATAGTTGTGACGAGGAGAGACGGTTTGTTGTCATGGGAGACAGGTCTCATTTTAACTCCACTTCCACTTGTTTTTATCCTTTACTAACTATCGTATTGTTCCAAACTGAATCTAAAACGAATCAAATCGGAAATAAAGGAACAAAACAAACGTTCATAGACCCTTTATAGACCAAAATAAACGTTCTGAAAGTACATGTGTGAGAGTTCTACATTGGTTGAGGAGAAGAACGAAACACTCTTTATAAGGGTGTGGAAACCTTTCTCTAGCCGATGCGTTTTAAAGTCTTGAGATGAAGCTCGAAAGGGAAAAGCCAAAGAAGACAATATCTACTAACTGTGGGTATCGAAACAAAAAATAATATCCAAACCTAATTTTCTTTGTTTGATTCTTTTATTTCCATTCTTCCACAACAAGTTTTGTTTTTGCAGATTAACCCTCAAAGAAAAGAATATTACCTAA

mRNA sequence

ATGATGGATCCTCAAGCTTTGTTGTGTTTCACTTTCATCTACATTGTCTTCGCCGGCGCCGGAGCTCAGTCCCCTTCCACTCCTCCCACCGCCACTCCTCCGCCTGTTTCATCTCCCCCTCCAGCCACTCCTCCGCCTGTTTCATCTCCCCCTCCAGCCACTCCCCCTCCTGTCTCACCTCCTCCTCCGGCATCTCCTCCTCCAGCTACTCCGCCTCCAGCAACCCCACCACCTGCGCCGTTGGCATCCCCACCAGCAGCAGTCCCGGCTCCTGCACCCAGTAAGAAGAAGTCAAAGGCAGCTTCATCACCATCGCCACTATTAACCCTCAAAGAAAAGAATATTACCTAA

Coding sequence (CDS)

ATGATGGATCCTCAAGCTTTGTTGTGTTTCACTTTCATCTACATTGTCTTCGCCGGCGCCGGAGCTCAGTCCCCTTCCACTCCTCCCACCGCCACTCCTCCGCCTGTTTCATCTCCCCCTCCAGCCACTCCTCCGCCTGTTTCATCTCCCCCTCCAGCCACTCCCCCTCCTGTCTCACCTCCTCCTCCGGCATCTCCTCCTCCAGCTACTCCGCCTCCAGCAACCCCACCACCTGCGCCGTTGGCATCCCCACCAGCAGCAGTCCCGGCTCCTGCACCCAGTAAGAAGAAGTCAAAGGCAGCTTCATCACCATCGCCACTATTAACCCTCAAAGAAAAGAATATTACCTAA

Protein sequence

MMDPQALLCFTFIYIVFAGAGAQSPSTPPTATPPPVSSPPPATPPPVSSPPPATPPPVSPPPPASPPPATPPPATPPPAPLASPPAAVPAPAPSKKKSKAASSPSPLLTLKEKNIT

Homology

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BLAST of CmaCh11G017130 vs. Swiss-Prot
Match: AGP9_ARATH (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana GN=AGP9 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 72/137 (52.55%), Postives = 81/137 (59.12%), Query Frame = 1


Query: 6   ALLCFTFIYIVFAGAGAQSPSTPPTATP--------------PPVSSPPPAT-------- 65
           A++C   I    AG   Q+P++PPTATP              PPVS+PPP T        
Sbjct: 8   AVICIVLI----AGVTGQAPTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTT 67

Query: 66  -------PPPVSSPPPATPPP------VSPPPP-ASPPPATPPP-ATPPPAPLASPPAAV 106
                  PPPVSSPPPA+PPP       SPPPP ASPPPATPPP ATPPPAPLASPPA V
Sbjct: 68  APPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQV 127

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BLAST of CmaCh11G017130 vs. TrEMBL
Match: A0A0A0K6D8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071560 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-17
Identity = 92/140 (65.71%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 2   MDPQALLCFTFIYIVFAGAGAQSPSTPPTATP--------PPVSSPPPA-TPPPVS---- 61
           MDP+ALLCFT I I F  A AQSPS+PPTATP        PPVSSPPPA TPPP S    
Sbjct: 1   MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPA 60

Query: 62  -----SPPPATPPPVSPPP---------PASPPPAT------PPPATPPPAPLASPPAAV 108
                SPPPATPPP SPPP         PASPPPAT      PPPATPPPAPLASPP AV
Sbjct: 61  SPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAV 120

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BLAST of CmaCh11G017130 vs. TrEMBL
Match: A0A061E237_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007181 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-12
Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 25  PSTPPTATPPPVSSPPPATPPPVSSPPPATPPPVSPPPPASPPPATPPPATPPPAPLASP 84
           PS+PP ATPPPVSSPPPA+PPP ++PPPA+PPP S PPPA+PPPATPPPAT PPAPLASP
Sbjct: 85  PSSPPPATPPPVSSPPPASPPP-ATPPPASPPPAS-PPPATPPPATPPPATSPPAPLASP 144

Query: 85  PAAVPAPAPSKKKSKAASSPSPL 108
           PAAVPAPAPSKKK+K + +PSPL
Sbjct: 145 PAAVPAPAPSKKKAK-SPAPSPL 164

[Close]

BLAST of CmaCh11G017130 vs. TrEMBL
Match: A0A0C5IBM0_GOSHI (PRP10 OS=Gossypium hirsutum GN=PRP10 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.7e-12
Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 26  STPPTATPPPVSSPPPATPPPVS----SPPPATPPPVSPP----PPASPPPATPPPATPP 85
           STPP ATPPPVSSPPPA+PPP +    +PPPATPPP SPP    PPASPPPATPPPATPP
Sbjct: 85  STPPPATPPPVSSPPPASPPPATPPPATPPPATPPPASPPQATPPPASPPPATPPPATPP 144

Query: 86  PAPLASPPAAVPAPAPSKKKSK-------AASSPSP 107
           PAPLASPPA VPAPAPSK K+K       A+S PSP
Sbjct: 145 PAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSP 180

[Close]

BLAST of CmaCh11G017130 vs. TrEMBL
Match: A0A0D2S8H0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G048900 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.7e-12
Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 26  STPPTATPPPVSSPPPATPPPVS----SPPPATPPPVSPP----PPASPPPATPPPATPP 85
           STPP ATPPPVSSPPPA+PPP +    +PPPATPPP SPP    PPASPPPATPPPATPP
Sbjct: 85  STPPPATPPPVSSPPPASPPPATPPPATPPPATPPPASPPQATPPPASPPPATPPPATPP 144

Query: 86  PAPLASPPAAVPAPAPSKKKSK-------AASSPSP 107
           PAPLASPPA VPAPAPSK K+K       A+S PSP
Sbjct: 145 PAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSP 180

[Close]

BLAST of CmaCh11G017130 vs. TrEMBL
Match: A0A067LJJ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16292 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.8e-11
Identity = 69/87 (79.31%), Postives = 74/87 (85.06%), Query Frame = 1


Query: 25  PSTPPTATPPPVSSPPPATPPPVSSPPPATPPPVSPPP----PASPPPATPPPATPPPAP 84
           P+TPP ATPPPVS PPPATPPP +SPPPATPPP SPPP    PA+PPPATPPPA PPPAP
Sbjct: 74  PATPPPATPPPVS-PPPATPPP-ASPPPATPPPASPPPATPPPATPPPATPPPAVPPPAP 133

Query: 85  LASPPAAVPAPAPSKKKSKAASSPSPL 108
           LA+PPA VPAPAPSKKK K A +PSPL
Sbjct: 134 LAAPPALVPAPAPSKKKLK-APAPSPL 157

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BLAST of CmaCh11G017130 vs. TAIR10
Match: AT2G14890.1 (AT2G14890.1 arabinogalactan protein 9)

HSP 1 Score: 60.8 bits (146), Expect = 6.2e-10
Identity = 72/137 (52.55%), Postives = 81/137 (59.12%), Query Frame = 1


Query: 6   ALLCFTFIYIVFAGAGAQSPSTPPTATP--------------PPVSSPPPAT-------- 65
           A++C   I    AG   Q+P++PPTATP              PPVS+PPP T        
Sbjct: 8   AVICIVLI----AGVTGQAPTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTT 67

Query: 66  -------PPPVSSPPPATPPP------VSPPPP-ASPPPATPPP-ATPPPAPLASPPAAV 106
                  PPPVSSPPPA+PPP       SPPPP ASPPPATPPP ATPPPAPLASPPA V
Sbjct: 68  APPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQV 127

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BLAST of CmaCh11G017130 vs. NCBI nr
Match: gi|778724917|ref|XP_004136948.2| (PREDICTED: classical arabinogalactan protein 9 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-17
Identity = 92/140 (65.71%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 2   MDPQALLCFTFIYIVFAGAGAQSPSTPPTATP--------PPVSSPPPA-TPPPVS---- 61
           MDP+ALLCFT I I F  A AQSPS+PPTATP        PPVSSPPPA TPPP S    
Sbjct: 1   MDPRALLCFTLISIAFPLARAQSPSSPPTATPSPPTTSTPPPVSSPPPAATPPPASPPPA 60

Query: 62  -----SPPPATPPPVSPPP---------PASPPPAT------PPPATPPPAPLASPPAAV 108
                SPPPATPPP SPPP         PASPPPAT      PPPATPPPAPLASPP AV
Sbjct: 61  SPPPASPPPATPPPASPPPASPPPASPPPASPPPATPPPASPPPPATPPPAPLASPPTAV 120

[Close]

BLAST of CmaCh11G017130 vs. NCBI nr
Match: gi|659110043|ref|XP_008455018.1| (PREDICTED: classical arabinogalactan protein 9 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 8.4e-17
Identity = 92/153 (60.13%), Postives = 98/153 (64.05%), Query Frame = 1


Query: 1   MMDPQA-LLCFTFIYIVFAGAGAQSPSTPPTATP--------------PPVSSPPPA--- 60
           MMDP+A LLCFTFI I FA AGAQSPS+PPTATP              PPVSSPPPA   
Sbjct: 1   MMDPRAFLLCFTFISIAFAIAGAQSPSSPPTATPSPPTTSAPPPASTPPPVSSPPPAATP 60

Query: 61  ----TPPPVS---------SPPPATPPPVSPPP--------------PASPPPATPPPAT 108
               TPPP S         SPPPATPPP SPPP              PASPPPA+PPPA 
Sbjct: 61  PPAATPPPASPPPASPPPASPPPATPPPASPPPASPPPASPPPASPPPASPPPASPPPAI 120

[Close]

BLAST of CmaCh11G017130 vs. NCBI nr
Match: gi|590687142|ref|XP_007042580.1| (Uncharacterized protein TCM_007181 [Theobroma cacao])

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 25  PSTPPTATPPPVSSPPPATPPPVSSPPPATPPPVSPPPPASPPPATPPPATPPPAPLASP 84
           PS+PP ATPPPVSSPPPA+PPP ++PPPA+PPP S PPPA+PPPATPPPAT PPAPLASP
Sbjct: 85  PSSPPPATPPPVSSPPPASPPP-ATPPPASPPPAS-PPPATPPPATPPPATSPPAPLASP 144

Query: 85  PAAVPAPAPSKKKSKAASSPSPL 108
           PAAVPAPAPSKKK+K + +PSPL
Sbjct: 145 PAAVPAPAPSKKKAK-SPAPSPL 164

[Close]

BLAST of CmaCh11G017130 vs. NCBI nr
Match: gi|1009125493|ref|XP_015879640.1| (PREDICTED: classical arabinogalactan protein 9 [Ziziphus jujuba])

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-12
Identity = 68/90 (75.56%), Postives = 75/90 (83.33%), Query Frame = 1


Query: 26  STPPTATPPPVSSPPPATPPPVS----SPPPATPPPVSPPP----PASPPPATPPPATPP 85
           S PP ATPPPVSSPPPA+PPP +    +PPPATPPP SPPP    PA+PPPATPPPATPP
Sbjct: 90  SAPPPATPPPVSSPPPASPPPATPPPATPPPATPPPASPPPASPPPATPPPATPPPATPP 149

Query: 86  PAPLASPPAAVPAPAPSKKKSKAASSPSPL 108
           PAPLASPPA VPAPAPSKKK+K + +PSPL
Sbjct: 150 PAPLASPPATVPAPAPSKKKAK-SPAPSPL 178

[Close]

BLAST of CmaCh11G017130 vs. NCBI nr
Match: gi|823264209|ref|XP_012464846.1| (PREDICTED: classical arabinogalactan protein 9-like [Gossypium raimondii])

HSP 1 Score: 78.6 bits (192), Expect = 8.2e-12
Identity = 70/96 (72.92%), Postives = 75/96 (78.12%), Query Frame = 1


Query: 26  STPPTATPPPVSSPPPATPPPVS----SPPPATPPPVSPP----PPASPPPATPPPATPP 85
           STPP ATPPPVSSPPPA+PPP +    +PPPATPPP SPP    PPASPPPATPPPATPP
Sbjct: 85  STPPPATPPPVSSPPPASPPPATPPPATPPPATPPPASPPQATPPPASPPPATPPPATPP 144

Query: 86  PAPLASPPAAVPAPAPSKKKSK-------AASSPSP 107
           PAPLASPPA VPAPAPSK K+K       A+S PSP
Sbjct: 145 PAPLASPPATVPAPAPSKTKAKSPALSPSASSPPSP 180

The following BLAST results are available for this feature:

BLAST of CmaCh11G017130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGP9_ARATH	1.1e-08	52.55	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana GN=AGP9 PE=1 SV=2	[more]

BLAST of CmaCh11G017130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6D8_CUCSA	1.5e-17	65.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071560 PE=4 SV=1	[more]
A0A061E237_THECC	2.0e-12	80.72	Uncharacterized protein OS=Theobroma cacao GN=TCM_007181 PE=4 SV=1	[more]
A0A0C5IBM0_GOSHI	5.7e-12	72.92	PRP10 OS=Gossypium hirsutum GN=PRP10 PE=2 SV=1	[more]
A0A0D2S8H0_GOSRA	5.7e-12	72.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G048900 PE=4 SV=1	[more]
A0A067LJJ1_JATCU	2.8e-11	79.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16292 PE=4 SV=1	[more]

BLAST of CmaCh11G017130 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14890.1	6.2e-10	52.55	arabinogalactan protein 9	[more]

BLAST of CmaCh11G017130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724917\|ref\|XP_004136948.2\|	2.2e-17	65.71	PREDICTED: classical arabinogalactan protein 9 [Cucumis sativus]	[more]
gi\|659110043\|ref\|XP_008455018.1\|	8.4e-17	60.13	PREDICTED: classical arabinogalactan protein 9 [Cucumis melo]	[more]
gi\|590687142\|ref\|XP_007042580.1\|	2.8e-12	80.72	Uncharacterized protein TCM_007181 [Theobroma cacao]	[more]
gi\|1009125493\|ref\|XP_015879640.1\|	4.8e-12	75.56	PREDICTED: classical arabinogalactan protein 9 [Ziziphus jujuba]	[more]
gi\|823264209\|ref\|XP_012464846.1\|	8.2e-12	72.92	PREDICTED: classical arabinogalactan protein 9-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G017130.1	CmaCh11G017130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 60..76 score: 3.8E-10coord: 39..60 score: 3.8E-10coord: 26..38 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G017130	Wax gourd	cmawgoB0116
CmaCh11G017130	Wax gourd	cmawgoB0129
CmaCh11G017130	Wax gourd	cmawgoB0145
CmaCh11G017130	Cucurbita maxima (Rimu)	cmacmaB032
CmaCh11G017130	Cucurbita maxima (Rimu)	cmacmaB135
CmaCh11G017130	Cucurbita maxima (Rimu)	cmacmaB149
CmaCh11G017130	Cucurbita maxima (Rimu)	cmacmaB163
CmaCh11G017130	Cucurbita maxima (Rimu)	cmacmaB167
CmaCh11G017130	Cucumber (Gy14) v1	cgycmaB0620
CmaCh11G017130	Cucurbita moschata (Rifu)	cmacmoB098
CmaCh11G017130	Cucurbita moschata (Rifu)	cmacmoB117
CmaCh11G017130	Cucurbita moschata (Rifu)	cmacmoB133
CmaCh11G017130	Cucurbita moschata (Rifu)	cmacmoB143
CmaCh11G017130	Cucurbita moschata (Rifu)	cmacmoB156
CmaCh11G017130	Wild cucumber (PI 183967)	cmacpiB132
CmaCh11G017130	Wild cucumber (PI 183967)	cmacpiB143
CmaCh11G017130	Cucumber (Chinese Long) v2	cmacuB146
CmaCh11G017130	Melon (DHL92) v3.5.1	cmameB098
CmaCh11G017130	Melon (DHL92) v3.5.1	cmameB141
CmaCh11G017130	Watermelon (Charleston Gray)	cmawcgB101
CmaCh11G017130	Watermelon (Charleston Gray)	cmawcgB126
CmaCh11G017130	Watermelon (Charleston Gray)	cmawcgB140
CmaCh11G017130	Watermelon (97103) v1	cmawmB115
CmaCh11G017130	Watermelon (97103) v1	cmawmB127
CmaCh11G017130	Cucurbita pepo (Zucchini)	cmacpeB108
CmaCh11G017130	Cucurbita pepo (Zucchini)	cmacpeB114
CmaCh11G017130	Cucurbita pepo (Zucchini)	cmacpeB116
CmaCh11G017130	Cucurbita pepo (Zucchini)	cmacpeB136
CmaCh11G017130	Cucurbita pepo (Zucchini)	cmacpeB154
CmaCh11G017130	Cucurbita pepo (Zucchini)	cmacpeB160
CmaCh11G017130	Bottle gourd (USVL1VR-Ls)	cmalsiB115
CmaCh11G017130	Bottle gourd (USVL1VR-Ls)	cmalsiB116
CmaCh11G017130	Bottle gourd (USVL1VR-Ls)	cmalsiB121
CmaCh11G017130	Bottle gourd (USVL1VR-Ls)	cmalsiB153
CmaCh11G017130	Cucumber (Gy14) v2	cgybcmaB158
CmaCh11G017130	Cucumber (Gy14) v2	cgybcmaB478
CmaCh11G017130	Cucumber (Gy14) v2	cgybcmaB895
CmaCh11G017130	Melon (DHL92) v3.6.1	cmamedB106
CmaCh11G017130	Melon (DHL92) v3.6.1	cmamedB135
CmaCh11G017130	Melon (DHL92) v3.6.1	cmamedB152
CmaCh11G017130	Silver-seed gourd	carcmaB0248
CmaCh11G017130	Silver-seed gourd	carcmaB0260
CmaCh11G017130	Silver-seed gourd	carcmaB0405
CmaCh11G017130	Silver-seed gourd	carcmaB0525
CmaCh11G017130	Silver-seed gourd	carcmaB0630
CmaCh11G017130	Silver-seed gourd	carcmaB1115
CmaCh11G017130	Cucumber (Chinese Long) v3	cmacucB0128
CmaCh11G017130	Cucumber (Chinese Long) v3	cmacucB0153
CmaCh11G017130	Cucumber (Chinese Long) v3	cmacucB0171
CmaCh11G017130	Watermelon (97103) v2	cmawmbB104
CmaCh11G017130	Watermelon (97103) v2	cmawmbB127
CmaCh11G017130	Watermelon (97103) v2	cmawmbB148