CmaCh11G016630 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTTCGATTGTTTTGTCACGGCGGTGAGTGCGAGACATCTTTTGGAGATGCCATTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCCTCCATTGCCGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTACCCGAATTGCCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTTCCCGAAGTACCAAAATTGCCCAACTTGCCTAAACCTGAAGTTCCTAAGTTGCCGGAATTAACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATCCCTTCGTTCAACCCACCACATACATCTACCACTAAACCTTGA ATGAGCTTCGATTGTTTTGTCACGGCGGTGAGTGCGAGACATCTTTTGGAGATGCCATTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCCTCCATTGCCGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTACCCGAATTGCCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTTCCCGAAGTACCAAAATTGCCCAACTTGCCTAAACCTGAAGTTCCTAAGTTGCCGGAATTAACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATCCCTTCGTTCAACCCACCACATACATCTACCACTAAACCTTGA ATGAGCTTCGATTGTTTTGTCACGGCGGTGAGTGCGAGACATCTTTTGGAGATGCCATTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCCTCCATTGCCGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTACCCGAATTGCCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTTCCCGAAGTACCAAAATTGCCCAACTTGCCTAAACCTGAAGTTCCTAAGTTGCCGGAATTAACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATCCCTTCGTTCAACCCACCACATACATCTACCACTAAACCTTGA MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVELPPLEKPKVPELPKPELPKLPQLPKFEVPEVPKLPNLPKPEVPKLPELTPLPKPVLPTLPKDIPIPSFNPPHTSTTKP
BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A067E8H7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031697mg PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.0e-18 Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 1
BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A067EC93_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046981mg PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.4e-18 Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1
BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A059BBS5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00973 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 9.8e-18 Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of CmaCh11G016630 vs. TrEMBL
Match: M5VLD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 9.8e-18 Identity = 73/156 (46.79%), Postives = 86/156 (55.13%), Query Frame = 1
BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A059BAU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17 Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 1
BLAST of CmaCh11G016630 vs. TAIR10
Match: AT5G09530.1 (AT5G09530.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 81.6 bits (200), Expect = 3.7e-16 Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1
BLAST of CmaCh11G016630 vs. TAIR10
Match: AT5G09520.1 (AT5G09520.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 70.5 bits (171), Expect = 8.4e-13 Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1
BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|659110271|ref|XP_008455139.1| (PREDICTED: periaxin-like [Cucumis melo]) HSP 1 Score: 162.2 bits (409), Expect = 6.0e-37 Identity = 102/177 (57.63%), Postives = 115/177 (64.97%), Query Frame = 1
BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|778724535|ref|XP_011658824.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33 Identity = 95/162 (58.64%), Postives = 111/162 (68.52%), Query Frame = 1
BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|449438230|ref|XP_004136892.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33 Identity = 98/177 (55.37%), Postives = 111/177 (62.71%), Query Frame = 1
BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|659110269|ref|XP_008455138.1| (PREDICTED: periaxin-like [Cucumis melo]) HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31 Identity = 96/190 (50.53%), Postives = 114/190 (60.00%), Query Frame = 1
BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|778724533|ref|XP_011658823.1| (PREDICTED: periaxin-like [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26 Identity = 85/158 (53.80%), Postives = 97/158 (61.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |