CmaCh11G016630 (gene) Cucurbita maxima (Rimu)

NameCmaCh11G016630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr11 : 10953382 .. 10953759 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTCGATTGTTTTGTCACGGCGGTGAGTGCGAGACATCTTTTGGAGATGCCATTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCCTCCATTGCCGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTACCCGAATTGCCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTTCCCGAAGTACCAAAATTGCCCAACTTGCCTAAACCTGAAGTTCCTAAGTTGCCGGAATTAACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATCCCTTCGTTCAACCCACCACATACATCTACCACTAAACCTTGA

mRNA sequence

ATGAGCTTCGATTGTTTTGTCACGGCGGTGAGTGCGAGACATCTTTTGGAGATGCCATTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCCTCCATTGCCGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTACCCGAATTGCCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTTCCCGAAGTACCAAAATTGCCCAACTTGCCTAAACCTGAAGTTCCTAAGTTGCCGGAATTAACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATCCCTTCGTTCAACCCACCACATACATCTACCACTAAACCTTGA

Coding sequence (CDS)

ATGAGCTTCGATTGTTTTGTCACGGCGGTGAGTGCGAGACATCTTTTGGAGATGCCATTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAAGTACCCAGTTTGTCAAAGCCCGAGCTTCCTCCATTGCCGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTACCCGAATTGCCGAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGAGGTTCCCGAAGTACCAAAATTGCCCAACTTGCCTAAACCTGAAGTTCCTAAGTTGCCGGAATTAACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATCCCTTCGTTCAACCCACCACATACATCTACCACTAAACCTTGA

Protein sequence

MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVELPPLEKPKVPELPKPELPKLPQLPKFEVPEVPKLPNLPKPEVPKLPELTPLPKPVLPTLPKDIPIPSFNPPHTSTTKP
BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A067E8H7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031697mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-18
Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 1

Query: 7   VTAVSARHLLEMPLPKVPE-ELPKPEVPSLSKPELPPLPKVELPPLEKPKVPELPKPELP 66
           + AV AR LLE  LP++P+ ELPK E+P LSKPELP   KVELPPL KP++PE+PKPELP
Sbjct: 25  INAVGARLLLETALPEIPKPELPKFELPPLSKPELP---KVELPPLSKPELPEIPKPELP 84

Query: 67  KLPQLP---------KFEVPEV--PKLPNLPKPEVPKLPELTPLPKPVLPTLPKDIP--- 126
           K+P+LP         K EVPE+  P+LP  P+PE+P+LPE   +PKP LP LP ++P   
Sbjct: 85  KVPELPEIPEPKLPKKLEVPEIPQPELPEFPEPELPELPEFPEIPKPELPNLP-ELPFFP 144

BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A067EC93_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046981mg PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.4e-18
Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 1

Query: 12  ARHLLEMPLPKVPE-ELPKPEV-----PSLSKPELPPL-----PKVELPPLEKPKVPELP 71
           ARHLLE+ LP++P+ ELPK E+     P L K ELPPL     PKVELPPL KP++PE+P
Sbjct: 1   ARHLLEVALPEIPKPELPKVELSPFPKPELPKVELPPLSKPELPKVELPPLTKPELPEIP 60

Query: 72  KPELPKLPQLPKFEVPEVPK---LPNLPKPEVPKLPELTPLPKPVLPTLPKDIP----IP 126
           KPELPK+P+LP+F  P +PK   +P +PKPE+P+LPE   +PKP LP LP ++P    +P
Sbjct: 61  KPELPKVPELPEFPKPALPKKLEVPEIPKPELPELPEFPEIPKPELPELP-ELPSFPHLP 120

BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A059BBS5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00973 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.8e-18
Identity = 71/128 (55.47%), Postives = 86/128 (67.19%), Query Frame = 1

Query: 9   AVSARHLLEMPLPKVPEELPKPE------VPSLSKPELPPLPKVELPPL------EKPKV 68
           +V AR LLE+ LP+VPE LPKPE      +PSL KPELP LPKVELP +      E P+V
Sbjct: 26  SVKARQLLELALPEVPE-LPKPELPHLPDIPSLPKPELPSLPKVELPSVPELPKPELPEV 85

Query: 69  PELPKPELPKLPQLPKFEVPEVPKLPNLPKPEVPKLPELTPLPKPVLPTLPK-DIP-IPS 123
           PELPKPELP LP +     PE+P++P LPKPE+P LP +  LPKP LP+LPK ++P IP 
Sbjct: 86  PELPKPELPHLPDIVSLPKPELPEVPELPKPELPHLPNIPSLPKPELPSLPKVELPSIPE 145

BLAST of CmaCh11G016630 vs. TrEMBL
Match: M5VLD6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.8e-18
Identity = 73/156 (46.79%), Postives = 86/156 (55.13%), Query Frame = 1

Query: 12  ARHLLEMPLPKVPE---------------ELPKPEVPSLSKPELPPLPKVELPPLEKPKV 71
           AR LLE  LP+VPE               +LPKPE+P L KPELP LPK ELP L KP++
Sbjct: 5   ARFLLETSLPQVPELPKPELPPLHKPELPQLPKPELPQLPKPELPTLPKPELPTLPKPEL 64

Query: 72  PELPKPEL--------------------PKLPQLPKFEVPEVPKLPNLPKPEVPKLPELT 123
           P LPKP+L                    P +P+LPK E+P  P  P LPKPE+PKLPE+ 
Sbjct: 65  PTLPKPKLPPVPHVPTLPKPEGLKLAEEPHVPELPKPELPPRPNFPTLPKPELPKLPEIP 124

BLAST of CmaCh11G016630 vs. TrEMBL
Match: A0A059BAU3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.7e-17
Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 1

Query: 9   AVSARHLLEMPLPKVPEELPKPE------VPSLSKPELPPLPKVELPP---LEKPKVPEL 68
           +V AR LLE+ LP+VPE LPKPE      +PSL KPELP LPKVELP    L KP++P +
Sbjct: 26  SVEARQLLELALPEVPE-LPKPELPHLPDIPSLPKPELPSLPKVELPSVPELPKPELPTI 85

Query: 69  PKPELPKLPQLPKFEVPEVPKLPNLPKPEVPKLPELTPLPKPVLPTLPKDIPIPSFNPPH 123
           PKPELP++P+LPK E P +P + +LPKPE+P++PE+  LPKP LP LP    IPS   P 
Sbjct: 86  PKPELPEVPELPKPESPHLPDIVSLPKPELPEVPEVPELPKPELPHLP---DIPSLPKPE 144

BLAST of CmaCh11G016630 vs. TAIR10
Match: AT5G09530.1 (AT5G09530.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 81.6 bits (200), Expect = 3.7e-16
Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 1

Query: 9   AVSARHLLEMPLPKVPE--ELPKPEVPSLS---KPELPPLPKVELPPLEKPKVPELPKPE 68
           +V AR LLE P P++P+  ELPK EVP L    KPELP LP  E P  E PK+PE+PKPE
Sbjct: 31  SVGARRLLEDPKPEIPKLPELPKFEVPKLPEFPKPELPKLP--EFPKPELPKIPEIPKPE 90

Query: 69  LPKLPQLPKFE------VP--EVPKLPNLPKPEVPKLPELTPLPKPVLPTLPK 109
           LPK+P++PK E      +P  E+PK P +PKPE+PK+PE   +PKP LP +P+
Sbjct: 91  LPKVPEIPKPEETKLPDIPKLELPKFPEIPKPELPKMPE---IPKPELPKVPE 138

BLAST of CmaCh11G016630 vs. TAIR10
Match: AT5G09520.1 (AT5G09520.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 70.5 bits (171), Expect = 8.4e-13
Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1

Query: 9   AVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVELPPLEKPKVPELPKPELPKLP 68
           +V AR LLE P P++P        P L KPE+P LP  E P LE PK+PE+PKPE+PKLP
Sbjct: 29  SVGARRLLEEPKPEIPT------FPELPKPEMPKLP--EFPKLELPKLPEIPKPEMPKLP 88

Query: 69  QLPKFEV---PEVPKLPNLPKPEVPKLPELTPLPKPVLPTLPKDIPIPSFNPP 119
           ++ K E+   PE+PK+P  PK + PKLPE   LPK      P++  +P+F  P
Sbjct: 89  EIQKPELPTFPELPKMPEFPKFDFPKLPE---LPK------PEETKVPAFTMP 124

BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|659110271|ref|XP_008455139.1| (PREDICTED: periaxin-like [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 6.0e-37
Identity = 102/177 (57.63%), Postives = 115/177 (64.97%), Query Frame = 1

Query: 1   MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVE------LPPLEKP 60
           MSFD  + +VSARHLLE PLP VPEELPKPE+P+L KPELPPLPKVE      LPPLEKP
Sbjct: 21  MSFDFLIMSVSARHLLETPLPHVPEELPKPEIPTLPKPELPPLPKVELPPLPHLPPLEKP 80

Query: 61  KVPELPKPELPKLPQLPKF--------------------------------EVPEVPKLP 120
           KVPELPKPELPKLP+LPK                                 E+P++P+LP
Sbjct: 81  KVPELPKPELPKLPELPKVPNFDHSKVPEVPTIPKFDLPKLAEVSDHLPKPELPKLPELP 140

Query: 121 NLPKPEV--------------PKLPELTPLPKPVLPTLPKDIPIPSFNPPHTSTTKP 126
           ++PKPE+              PKLPEL PLPKPVLPTLPKDIP PSFNPPHT+TT P
Sbjct: 141 SVPKPELPKLPELPNIPKPELPKLPELPPLPKPVLPTLPKDIPFPSFNPPHTTTTSP 197

BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|778724535|ref|XP_011658824.1| (PREDICTED: periaxin-like [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-33
Identity = 95/162 (58.64%), Postives = 111/162 (68.52%), Query Frame = 1

Query: 1   MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVE------LPPLEKP 60
           MSFD F+TA SARHLLE PLPKVPEELPKPE+P+L KP+LPPLPK E      LPPLEKP
Sbjct: 22  MSFDFFMTA-SARHLLETPLPKVPEELPKPEMPTLPKPQLPPLPKFELPPLPHLPPLEKP 81

Query: 61  KVPELPKPELPKLPQLPKF-------------------------------EVPEVPKLPN 120
           K+PELPK ELPK P+LPK                                E+P++P+LPN
Sbjct: 82  KLPELPKYELPKFPELPKVPSFDLSKIPEVPSLPKFDISKLPEVSNPPKSELPKLPELPN 141

Query: 121 LPKPEVPKLPELTPLPKPVLPTLPKDIPIPSFNPPHTSTTKP 126
           +PKPE+PKLPEL  LPKPVLPTLPKD+  PSF+PPH +T+ P
Sbjct: 142 VPKPELPKLPELPLLPKPVLPTLPKDMSFPSFSPPHVTTSNP 182

BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|449438230|ref|XP_004136892.1| (PREDICTED: periaxin-like [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33
Identity = 98/177 (55.37%), Postives = 111/177 (62.71%), Query Frame = 1

Query: 1   MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVE------LPPLEKP 60
           MSFD  + +VSARHLLE P+P  PE LPKPE+P+L K ELPPLPKVE      LPPLEKP
Sbjct: 22  MSFDFLIMSVSARHLLETPIPHGPEGLPKPEIPTLPKSELPPLPKVELPPLPHLPPLEKP 81

Query: 61  KVPELPKPELPKLPQLPKF--------------------------------EVPEVPKLP 120
           KVPELPKPELPKLP+LPK                                 E+P++P+LP
Sbjct: 82  KVPELPKPELPKLPELPKVPNFDHSKVPEIPTMPKFDLPKLAEVPDHLPKPELPKLPELP 141

Query: 121 NLPKPEVPKL--------------PELTPLPKPVLPTLPKDIPIPSFNPPHTSTTKP 126
           NLPKPE+PKL              PEL  LPKPVLP+LPKDIP PSFNPPHT+TT P
Sbjct: 142 NLPKPELPKLPELPNIPKPELPKVPELPSLPKPVLPSLPKDIPFPSFNPPHTTTTTP 198

BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|659110269|ref|XP_008455138.1| (PREDICTED: periaxin-like [Cucumis melo])

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 96/190 (50.53%), Postives = 114/190 (60.00%), Query Frame = 1

Query: 1   MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVELPPL------EKP 60
           MSFD F+   SARHLLE PLPKVPEELPK E+P+L+KPELPPLPK ELPPL      EKP
Sbjct: 22  MSFDFFIMTASARHLLETPLPKVPEELPKLEIPTLAKPELPPLPKFELPPLPHLPPLEKP 81

Query: 61  KVPELPKPEL-----------------PKLPQLPKF------------------------ 120
           K+PEL KPEL                 P++P +PKF                        
Sbjct: 82  KLPELSKPELPKLPELPKVPNLDLSKIPQVPSVPKFDLPKLSEVSNPPQSELPKSPELSN 141

Query: 121 ----EVPEVPKLPNLPKPE--------------VPKLPELTPLPKPVLPTLPKDIPIPSF 126
               E+P++P+LPN+PKPE              +PKLPEL+PLPKPVLPTLPKD+P PSF
Sbjct: 142 GLKPELPKLPELPNVPKPELPKLPELPNVPKPELPKLPELSPLPKPVLPTLPKDMPFPSF 201

BLAST of CmaCh11G016630 vs. NCBI nr
Match: gi|778724533|ref|XP_011658823.1| (PREDICTED: periaxin-like [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26
Identity = 85/158 (53.80%), Postives = 97/158 (61.39%), Query Frame = 1

Query: 1   MSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELPPLPKVELPPL--------- 60
           M+FD  +  V AR+LLE PLP   EELPKPE+PSL   E PPLPKVELPPL         
Sbjct: 21  MNFDISIMTVDARYLLETPLP---EELPKPEIPSLPNLEFPPLPKVELPPLPHLPPLEKP 80

Query: 61  ------------------EKPK---VPELPKPELPKLPQLPKF---EVPEVPKLPNLPKP 120
                               PK   V ELPKPE PK P+LP F   EVP++P+LPN+PKP
Sbjct: 81  KLPELPKVPNLDHSKDSSNVPKLSEVSELPKPEFPKFPELPNFPKPEVPKLPELPNVPKP 140

Query: 121 EVPKLPELTPLPKPVLPTLPKDIPIPSFNPPHTSTTKP 126
           E+PKLPE  PLPKP   +LPKDIP PSFN PHT+T  P
Sbjct: 141 ELPKLPEFPPLPKPAFASLPKDIPYPSFNSPHTTTINP 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A067E8H7_CITSI2.0e-1853.33Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031697mg PE=4 SV=1[more]
A0A067EC93_CITSI3.4e-1853.79Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g046981mg PE=4 S... [more]
A0A059BBS5_EUCGR9.8e-1855.47Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00973 PE=4 SV=1[more]
M5VLD6_PRUPE9.8e-1846.79Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023337mg PE=4 SV=1[more]
A0A059BAU3_EUCGR1.7e-1756.10Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00975 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G09530.13.7e-1653.98 hydroxyproline-rich glycoprotein family protein[more]
AT5G09520.18.4e-1347.79 hydroxyproline-rich glycoprotein family protein[more]
Match NameE-valueIdentityDescription
gi|659110271|ref|XP_008455139.1|6.0e-3757.63PREDICTED: periaxin-like [Cucumis melo][more]
gi|778724535|ref|XP_011658824.1|1.1e-3358.64PREDICTED: periaxin-like [Cucumis sativus][more]
gi|449438230|ref|XP_004136892.1|1.4e-3355.37PREDICTED: periaxin-like [Cucumis sativus][more]
gi|659110269|ref|XP_008455138.1|1.3e-3150.53PREDICTED: periaxin-like [Cucumis melo][more]
gi|778724533|ref|XP_011658823.1|2.2e-2653.80PREDICTED: periaxin-like [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G016630.1CmaCh11G016630.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33088FAMILY NOT NAMEDcoord: 5..125
score: 3.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G016630Cucumber (Gy14) v1cgycmaB0620
CmaCh11G016630Cucumber (Gy14) v1cgycmaB0621
CmaCh11G016630Cucurbita moschata (Rifu)cmacmoB117
CmaCh11G016630Cucurbita moschata (Rifu)cmacmoB133
CmaCh11G016630Cucurbita moschata (Rifu)cmacmoB143
CmaCh11G016630Cucurbita moschata (Rifu)cmacmoB156
CmaCh11G016630Wild cucumber (PI 183967)cmacpiB143
CmaCh11G016630Wild cucumber (PI 183967)cmacpiB153
CmaCh11G016630Cucumber (Chinese Long) v2cmacuB146
CmaCh11G016630Cucumber (Chinese Long) v2cmacuB156
CmaCh11G016630Melon (DHL92) v3.5.1cmameB096
CmaCh11G016630Melon (DHL92) v3.5.1cmameB098
CmaCh11G016630Melon (DHL92) v3.5.1cmameB145
CmaCh11G016630Watermelon (Charleston Gray)cmawcgB075
CmaCh11G016630Watermelon (97103) v1cmawmB075
CmaCh11G016630Watermelon (97103) v1cmawmB118
CmaCh11G016630Cucurbita pepo (Zucchini)cmacpeB114
CmaCh11G016630Cucurbita pepo (Zucchini)cmacpeB116
CmaCh11G016630Cucurbita pepo (Zucchini)cmacpeB136
CmaCh11G016630Cucurbita pepo (Zucchini)cmacpeB154
CmaCh11G016630Bottle gourd (USVL1VR-Ls)cmalsiB115
CmaCh11G016630Bottle gourd (USVL1VR-Ls)cmalsiB117
CmaCh11G016630Cucumber (Gy14) v2cgybcmaB895
CmaCh11G016630Cucumber (Gy14) v2cgybcmaB902
CmaCh11G016630Melon (DHL92) v3.6.1cmamedB104
CmaCh11G016630Melon (DHL92) v3.6.1cmamedB106
CmaCh11G016630Silver-seed gourdcarcmaB0399
CmaCh11G016630Silver-seed gourdcarcmaB0405
CmaCh11G016630Silver-seed gourdcarcmaB0525
CmaCh11G016630Cucumber (Chinese Long) v3cmacucB0171
CmaCh11G016630Cucumber (Chinese Long) v3cmacucB0180
CmaCh11G016630Watermelon (97103) v2cmawmbB149
CmaCh11G016630Wax gourdcmawgoB0116
CmaCh11G016630Cucurbita maxima (Rimu)cmacmaB135
CmaCh11G016630Cucurbita maxima (Rimu)cmacmaB149
CmaCh11G016630Cucurbita maxima (Rimu)cmacmaB163
CmaCh11G016630Cucumber (Gy14) v1cgycmaB0222