CmaCh11G013960 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAATTACAGAAGCAGAACCACCGCAGATTCAATTCTCGATTCTCTCTCCCTCAATCCTCTGCCGTATCCTGTCCTCCTCCTCCTCGCCGTCGTCTTCATCTTCCTCGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCTGAGGATCAGATCAACTGGATTCTCTTCGCCACGCCAGTACTCCTCATCATCCTCGCTCGATTCCTCTCCTCCGTCGATCCTAGCTTCTTTTCTTCCTCGCCGTGGGACCGCCGCCGCAGAACGCACCACCTCCCTGCCGAGGGAAGTTCGCCGTGGGGCGTCGCTGCGTTGATCGTGCTGCTGCTTGTTCTCGTGCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATATAGATACCTTATGTATATAGAAATGGCGTACGCGATCGCTCCTCTGCAGTGGAGCGCGTTGCGGTTGATTTGATTTCATAAAAGGTATGTTTCCGTTGATCTAACTTTTTGAAAAAGGAAATCCGTGTTTATATATACAGTGGATGTATGTTGTATTATTGGATGGAAATCTTATCAGTTGGCCTTGGTTTTTAGTGCTTGAATGAAGATGAAGATGAAGATGAAGAGGAACTGTTTTTGTTTATCAAATAAAAATAAATACTCGTAGATTTTCATTCCTGTAATTTGTGCATCACTTTGAAGCTATGAATAGAACAGATCACTTGTTTTCTTCACCATAGGCGCTTAGTTTCCTTGGAATTTAATTTGAATAATTTTCTTTTTAGAACAAACAAACATATATACACATTTGACGTTCGATCTCTTCTCTAATGTTGAATTCAAAAAACAAAAAGAAACAAATAATTAGATTACTTGTAACAGTGAGCATTGTGATTACTTTTGTATTTTTGTTTAATTTATTTTGTAGAAAAAAAACCTTCCTATTGA ATGAGCAATTACAGAAGCAGAACCACCGCAGATTCAATTCTCGATTCTCTCTCCCTCAATCCTCTGCCGTATCCTGTCCTCCTCCTCCTCGCCGTCGTCTTCATCTTCCTCGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCTGAGGATCAGATCAACTGGATTCTCTTCGCCACGCCAGTACTCCTCATCATCCTCGCTCGATTCCTCTCCTCCGTCGATCCTAGCTTCTTTTCTTCCTCGCCGTGGGACCGCCGCCGCAGAACGCACCACCTCCCTGCCGAGGGAAGTTCGCCGTGGGGCGTCGCTGCGTTGATCGTGCTGCTGCTTGTTCTCGTGCAGTTCCAGTCCTCGTTCCAAAAAAAACCTTCCTATTGA ATGAGCAATTACAGAAGCAGAACCACCGCAGATTCAATTCTCGATTCTCTCTCCCTCAATCCTCTGCCGTATCCTGTCCTCCTCCTCCTCGCCGTCGTCTTCATCTTCCTCGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCTGAGGATCAGATCAACTGGATTCTCTTCGCCACGCCAGTACTCCTCATCATCCTCGCTCGATTCCTCTCCTCCGTCGATCCTAGCTTCTTTTCTTCCTCGCCGTGGGACCGCCGCCGCAGAACGCACCACCTCCCTGCCGAGGGAAGTTCGCCGTGGGGCGTCGCTGCGTTGATCGTGCTGCTGCTTGTTCTCGTGCAGTTCCAGTCCTCGTTCCAAAAAAAACCTTCCTATTGA MSNYRSRTTADSILDSLSLNPLPYPVLLLLAVVFIFLGASWWLSYESAVEAAEDQINWILFATPVLLIILARFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQSSFQKKPSY
BLAST of CmaCh11G013960 vs. TrEMBL
Match: A0A0A0K4L6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009710 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 4.6e-55 Identity = 108/125 (86.40%), Postives = 120/125 (96.00%), Query Frame = 1
BLAST of CmaCh11G013960 vs. TrEMBL
Match: W9QNH7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003219 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 7.9e-39 Identity = 78/123 (63.41%), Postives = 100/123 (81.30%), Query Frame = 1
BLAST of CmaCh11G013960 vs. TrEMBL
Match: A0A0B2RN13_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_013695 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.0e-38 Identity = 78/120 (65.00%), Postives = 102/120 (85.00%), Query Frame = 1
BLAST of CmaCh11G013960 vs. TrEMBL
Match: I1JSF8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G005500 PE=4 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 1.0e-38 Identity = 78/120 (65.00%), Postives = 102/120 (85.00%), Query Frame = 1
BLAST of CmaCh11G013960 vs. TrEMBL
Match: A0A0D2TWF1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G033700 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.0e-38 Identity = 83/127 (65.35%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of CmaCh11G013960 vs. TAIR10
Match: AT2G21180.1 (AT2G21180.1 unknown protein) HSP 1 Score: 117.9 bits (294), Expect = 4.8e-27 Identity = 70/121 (57.85%), Postives = 86/121 (71.07%), Query Frame = 1
BLAST of CmaCh11G013960 vs. TAIR10
Match: AT5G19875.1 (AT5G19875.1 unknown protein) HSP 1 Score: 77.4 bits (189), Expect = 7.1e-15 Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 1
BLAST of CmaCh11G013960 vs. NCBI nr
Match: gi|659094302|ref|XP_008447987.1| (PREDICTED: uncharacterized protein LOC103490309 [Cucumis melo]) HSP 1 Score: 225.3 bits (573), Expect = 6.0e-56 Identity = 111/125 (88.80%), Postives = 120/125 (96.00%), Query Frame = 1
BLAST of CmaCh11G013960 vs. NCBI nr
Match: gi|700187994|gb|KGN43227.1| (hypothetical protein Csa_7G009710 [Cucumis sativus]) HSP 1 Score: 221.9 bits (564), Expect = 6.6e-55 Identity = 108/125 (86.40%), Postives = 120/125 (96.00%), Query Frame = 1
BLAST of CmaCh11G013960 vs. NCBI nr
Match: gi|703070008|ref|XP_010088668.1| (hypothetical protein L484_003219 [Morus notabilis]) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38 Identity = 78/123 (63.41%), Postives = 100/123 (81.30%), Query Frame = 1
BLAST of CmaCh11G013960 vs. NCBI nr
Match: gi|694439489|ref|XP_009346628.1| (PREDICTED: uncharacterized protein LOC103938347 [Pyrus x bretschneideri]) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38 Identity = 80/122 (65.57%), Postives = 99/122 (81.15%), Query Frame = 1
BLAST of CmaCh11G013960 vs. NCBI nr
Match: gi|356508015|ref|XP_003522758.1| (PREDICTED: uncharacterized protein LOC100793388 [Glycine max]) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-38 Identity = 78/120 (65.00%), Postives = 102/120 (85.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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