CmaCh11G013510 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G013510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Expansin-like family protein
Location	Cma_Chr11 : 8943977 .. 8945421 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCTTCTTCCTCCCTCTTCTCTTCCTCACCATTGTCTCCTCCGCCGCTGCCTGTGATCGTTGTCTTCATCAGGCCAAAGCCGCCTTCTACCAGGTCGAATCCGACGGTGAACGTAAAATTCCAATCCCCCTTTGAATTCTTCGACTTTTCCGCTATTAAAGTCCGATCCAAGGCCGACCCAGATCGAATTTTCACATTTAACCAATTGGGTTTGTTTCATTTCTTGTAGTTAGAGGCGCCTGTGGCTATGGCAATCTCACCTCGGAGCTCTCAAATGGCCACTTCTCGGCTATCACGGCTACTCTTTACGGCCACGGCGCTGGCTGTGGCGCCTGCTTTCAAGTAAATTTCTCACCCATCCCTTCCCTTTGTCTCAATTGTTAGGAGAGGTCTACGTTGACTAATTTAGAGAATGATCATGGGTTTATCTCTATTGGTACGAGCTCTTTTAGGAGAGCTTCGGCTCAAAGTGGACAATATCAAACTGTTATGGAGCGTCGTTATTCATAACATTTGAATCATCATGACGTGAAAGTGTCGGGTTTGTGCAGGTAAGGTGTAAAAATGAGGCACTTTGCAACAAAGAAGGCACCAAGATTGTTGTGACGGATGGCAATGAGAGCTCTCAAACAGACCTTGTAATTAGCAAGAAGGCTTTTAGTGAAATGGGTTTGAGTGGCAAAGAGGAATTGCTTATAATTGAAGGAGTTGTGGACGTTGAATTCAAAAGGTTGGCTCATAATTGATCTACTTTTTCATGTTCAATCATTGGAGGCTCATAATTTTAGTGGTTTTTTTGTTTTTGTAGGGTTCCTTGTGAGTACAAAAACAAGAACTTGATGGTTAGAGTGGAAGAGATGAGCAAACCTCCCACTTATTTAGCCATGAAATTGCTTTACCAAGGTGGCCAAACCGAAATAGTAGGCATAGATATTGCTAAGGTGGGTGAATCGAATTGGAGTATGATGGCTCGGAACTATGGAGCTGTTTGGGACTCAAAACGTCCCATATCGGAAGGGCCATTGCAATTGCGGTTTGTGTTGACTTCTGGATTTGATGGAAAGTGGATCTGGTCGAAGTACGTGTTTCCTGTTGATTGGAGACCTGGACAGGTTTACGATACTGGAGTTCAAATTAATGACGTGGCGAAAGAGAATTGTCCAGATGATCAGTGTGCTGATAAGCATTGGGCGGGTCCAGTAGGTGCTTGATTGCTCCAACAAATATATGTTTTATAACTAGAAATAAACACATGCATTGACTTGTGAAATTTCGTTTTACCCTTACATTAAAAAGAAACAATAAATGTCCAAAATTTATGTCGGTTGTTTTTTATCTTGTCTCATCCTACTATAGCTTGAGCATCGATAGCCTATCTTCAACATCCTCAACCAATTAATAAGAAACCTTTTAGCTTCGATATTGATTGTGAAATTGCGTTG

mRNA sequence

ATGCCCTTCTTCCTCCCTCTTCTCTTCCTCACCATTGTCTCCTCCGCCGCTGCCTGTGATCGTTGTCTTCATCAGGCCAAAGCCGCCTTCTACCAGGTCGAATCCGACGGTGAACTTAGAGGCGCCTGTGGCTATGGCAATCTCACCTCGGAGCTCTCAAATGGCCACTTCTCGGCTATCACGGCTACTCTTTACGGCCACGGCGCTGGCTGTGGCGCCTGCTTTCAAGTAAGGTGTAAAAATGAGGCACTTTGCAACAAAGAAGGCACCAAGATTGTTGTGACGGATGGCAATGAGAGCTCTCAAACAGACCTTGTAATTAGCAAGAAGGCTTTTAGTGAAATGGGTTTGAGTGGCAAAGAGGAATTGCTTATAATTGAAGGAGTTGTGGACGTTGAATTCAAAAGGGTTCCTTGTGAGTACAAAAACAAGAACTTGATGGTTAGAGTGGAAGAGATGAGCAAACCTCCCACTTATTTAGCCATGAAATTGCTTTACCAAGGTGGCCAAACCGAAATAGTAGGCATAGATATTGCTAAGGTGGGTGAATCGAATTGGAGTATGATGGCTCGGAACTATGGAGCTGTTTGGGACTCAAAACGTCCCATATCGGAAGGGCCATTGCAATTGCGGTTTGTGTTGACTTCTGGATTTGATGGAAAGTGGATCTGGTCGAAGTACGTGTTTCCTGTTGATTGGAGACCTGGACAGGTTTACGATACTGGAGTTCAAATTAATGACGTGGCGAAAGAGAATTGTCCAGATGATCAGTGTGCTGATAAGCATTGGGCGGGTCCAGTAGGTGCTTGATTGCTCCAACAAATATATGTTTTATAACTAGAAATAAACACATGCATTGACTTGTGAAATTTCGTTTTACCCTTACATTAAAAAGAAACAATAAATGTCCAAAATTTATGTCGGTTGTTTTTTATCTTGTCTCATCCTACTATAGCTTGAGCATCGATAGCCTATCTTCAACATCCTCAACCAATTAATAAGAAACCTTTTAGCTTCGATATTGATTGTGAAATTGCGTTG

Coding sequence (CDS)

ATGCCCTTCTTCCTCCCTCTTCTCTTCCTCACCATTGTCTCCTCCGCCGCTGCCTGTGATCGTTGTCTTCATCAGGCCAAAGCCGCCTTCTACCAGGTCGAATCCGACGGTGAACTTAGAGGCGCCTGTGGCTATGGCAATCTCACCTCGGAGCTCTCAAATGGCCACTTCTCGGCTATCACGGCTACTCTTTACGGCCACGGCGCTGGCTGTGGCGCCTGCTTTCAAGTAAGGTGTAAAAATGAGGCACTTTGCAACAAAGAAGGCACCAAGATTGTTGTGACGGATGGCAATGAGAGCTCTCAAACAGACCTTGTAATTAGCAAGAAGGCTTTTAGTGAAATGGGTTTGAGTGGCAAAGAGGAATTGCTTATAATTGAAGGAGTTGTGGACGTTGAATTCAAAAGGGTTCCTTGTGAGTACAAAAACAAGAACTTGATGGTTAGAGTGGAAGAGATGAGCAAACCTCCCACTTATTTAGCCATGAAATTGCTTTACCAAGGTGGCCAAACCGAAATAGTAGGCATAGATATTGCTAAGGTGGGTGAATCGAATTGGAGTATGATGGCTCGGAACTATGGAGCTGTTTGGGACTCAAAACGTCCCATATCGGAAGGGCCATTGCAATTGCGGTTTGTGTTGACTTCTGGATTTGATGGAAAGTGGATCTGGTCGAAGTACGTGTTTCCTGTTGATTGGAGACCTGGACAGGTTTACGATACTGGAGTTCAAATTAATGACGTGGCGAAAGAGAATTGTCCAGATGATCAGTGTGCTGATAAGCATTGGGCGGGTCCAGTAGGTGCTTGA

Protein sequence

MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGKEELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKVGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYDTGVQINDVAKENCPDDQCADKHWAGPVGA

Homology

[Close]

BLAST of CmaCh11G013510 vs. Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-75
Identity = 137/262 (52.29%), Postives = 185/262 (70.61%), Query Frame = 1


Query: 4   FLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITAT 63
           FL  + L   SSAAACDRCLH +KAA++   S     GAC YG++ +    GH +A   +
Sbjct: 7   FLLSVVLLFSSSAAACDRCLHSSKAAYFSSAS-ALSSGACAYGSMATGFFAGHIAAALPS 66

Query: 64  LYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMG--LSGKE 123
           +Y  G+GCGACFQVRCKN  LC+ +GT ++VTD N+++QTDLV+S +AF  M   + G +
Sbjct: 67  IYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGAD 126

Query: 124 ELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKV 183
             L+ +G+VD+E++RVPC+Y NK + VRVEE SK P YLA+KLLYQGGQTE+V I IA+V
Sbjct: 127 RDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQV 186

Query: 184 GESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYDT 243
           G S+WS M R++GAVW + + +  G LQ RFV+T+G+DGK +WS+ V P +W  G+ YD 
Sbjct: 187 GSSHWSYMTRSHGAVWVTDK-VPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDA 246

Query: 244 GVQINDVAKENCPDDQCADKHW 264
           GVQI D+A+E C  D C D  W
Sbjct: 247 GVQITDIAQEGC--DPCDDHIW 264

[Close]

BLAST of CmaCh11G013510 vs. Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.5e-74
Identity = 135/257 (52.53%), Postives = 180/257 (70.04%), Query Frame = 1


Query: 4   FLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITAT 63
           +L ++     SS  ACDRCLH++KA+++   S     GAC YG + +    GH +A   +
Sbjct: 6   YLIVVIFLFSSSVNACDRCLHRSKASYFSSAS-ALSSGACAYGPMATSFFAGHIAAAIPS 65

Query: 64  LYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMG--LSGKE 123
           +Y  GAGCGACFQVRCKN  LCN +GT ++VTD N S+QTDLV+S +AF  M   + G +
Sbjct: 66  IYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVD 125

Query: 124 ELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKV 183
           + L+ +G+VDVE++RVPC Y  +NL VRVEE SK P YLA+KLLYQGGQTE+VGIDIA V
Sbjct: 126 KYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPV 185

Query: 184 GESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYDT 243
           G S WS M+R++GAVW + + +  G LQ +F +T G+DGK +WSK V P +W  G++YD 
Sbjct: 186 GSSQWSYMSRSHGAVWATDK-VPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDA 245

Query: 244 GVQINDVAKENCPDDQC 259
           GVQI D+A+E C  D C
Sbjct: 246 GVQITDIAQEGC--DTC 258

[Close]

BLAST of CmaCh11G013510 vs. Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.3e-73
Identity = 135/263 (51.33%), Postives = 184/263 (69.96%), Query Frame = 1


Query: 4   FLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITAT 63
           FL ++     SS  ACDRCLH++KAA++   S     GAC YG++ +    GH +A   +
Sbjct: 6   FLIVVIFLFSSSVNACDRCLHRSKAAYFSSAS-ALSSGACAYGSMATSFFAGHIAAAIPS 65

Query: 64  LYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMG--LSGKE 123
           +Y  GAGCGACFQVRCKN  LC+ +GT +++TD N+S+QTDLV+S +AF  M   + G +
Sbjct: 66  IYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGAD 125

Query: 124 ELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKV 183
           + L+ +G+VD+E++RVPC+Y NKN+ VRVEE SK P YL +KLLYQGGQTE+V IDIA+V
Sbjct: 126 KDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQV 185

Query: 184 GES-NWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 243
           G S NW  M R++GAVW + + +  G +Q RFV+T G+DGK IWS+ V P +W  G++YD
Sbjct: 186 GSSPNWGYMTRSHGAVWVTDK-VPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYD 245

Query: 244 TGVQINDVAKENCPDDQCADKHW 264
            GVQI D+A+E C  D C    W
Sbjct: 246 AGVQITDIAQEGC--DPCDAHIW 264

[Close]

BLAST of CmaCh11G013510 vs. Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.1e-63
Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 1


Query: 7   LLFLTIVSSAAA----CDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITA 66
           +LF  +V  +A+    CDRC+ ++KA F    S     G+CGYG+L +  + GH +A + 
Sbjct: 15  VLFFVVVGMSASMVSGCDRCVRRSKAGFRD-SSIALNAGSCGYGSLAASFNGGHLAAASP 74

Query: 67  TLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTD-GNESSQTDLVISKKAFSEMGLSGKE 126
            L+  G GCGACFQVRCK+  LC+  G K+VVTD    +++TDLV+S  A++ M   G  
Sbjct: 75  ALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMA 134

Query: 127 ELLIIEGVVDVEFKRVPCEYK-NKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 186
             L     VDVE+KRVPCEY   +NL +RVEE S+PP  L+++ LYQGGQT+IV +D+A 
Sbjct: 135 AQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVAT 194

Query: 187 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSK-YVFPVDWRPGQVY 246
           VG SNW  M R+YG  W S      GPLQ R V+T G+DGKW+W+   V P  W  G+VY
Sbjct: 195 VGSSNWKFMTRDYGPAW-STAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVY 254

Query: 247 DTGVQINDVAKENCPDDQCADKHW 264
           D GVQI DVA+E C    C  + W
Sbjct: 255 DAGVQIADVAQEGC--YPCDTQEW 274

[Close]

BLAST of CmaCh11G013510 vs. Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.0e-62
Identity = 115/240 (47.92%), Postives = 158/240 (65.83%), Query Frame = 1


Query: 16  AAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITA-TLYGHGAGCGAC 75
           A+ CDRC+ +++AA+Y   S     G+CGYG   +  + G F A     LY  G GCGAC
Sbjct: 33  ASGCDRCVRRSRAAYY-TSSLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGAC 92

Query: 76  FQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGKEELLIIEGVVDVEF 135
           +QVRCK++ LC+  G ++VVTD   +++T LV+S  AF+ M   G    L     VDVE+
Sbjct: 93  YQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEY 152

Query: 136 KRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKVGESNWSMMARNYG 195
           KRVPCEY++++L VRV+E S+ P  L +  LYQGGQT+IV +D+A+VG S+W  M R +G
Sbjct: 153 KRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHG 212

Query: 196 AVWDSKRPISEGPLQLRFVLTSGFDGKWIWS-KYVFPVDWRPGQVYDTGVQINDVAKENC 254
             W S      GPLQ+R V+T G+DGKW+W+ + V P  WR G+VYDTGVQI D+A+E C
Sbjct: 213 PSW-SMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDTGVQITDIAQEGC 270

[Close]

BLAST of CmaCh11G013510 vs. TrEMBL
Match: A0A0A0K0S3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019900 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 5.4e-106
Identity = 188/282 (66.67%), Postives = 221/282 (78.37%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           MPFFL LLFL++ SSA ACDRC+HQAKAAFYQ E+ G  RGACGYG+LT +LSNG+FSAI
Sbjct: 1   MPFFLLLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAI 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
              LY +GAGCGACFQVRCKNE +C+KEGTKI+VTD N+++ T LV+S+KAF EM +SGK
Sbjct: 61  MPPLYKYGAGCGACFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAMSGK 120

Query: 121 EELLIIEGVVDVEFK-------------------RVPCEYKNKNLMVRVEEMSKPPTYLA 180
           + LL+  GVVDVEFK                   R+PCEY NKNLMVRVEE S+ P YLA
Sbjct: 121 DGLLLSYGVVDVEFKSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLA 180

Query: 181 MKLLYQGGQTEIVGIDIAKVGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGK 240
           +KLL QGGQTEIV IDIA+VG SNW  M RNYGAVW++K+P  +GPLQLRFV+TSG+DGK
Sbjct: 181 IKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGK 240

Query: 241 WIWSKYVFPVDWRPGQVYDTGVQINDVAKENCPDDQCADKHW 264
           +IW+KYV P DWRPG VYDTGVQI D+AKE CP +QC D  W
Sbjct: 241 YIWAKYVLPADWRPGLVYDTGVQIYDIAKEGCPTEQCGDGQW 282

[Close]

BLAST of CmaCh11G013510 vs. TrEMBL
Match: I3SMJ2_MEDTR (Expansin A1 OS=Medicago truncatula GN=MTR_4g075790 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-85
Identity = 146/264 (55.30%), Postives = 199/264 (75.38%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           M FFL   F  + SSA ACDRCLHQ+KA+++  ++     GACGYG+L  + S GH +A 
Sbjct: 1   MAFFLCFFFFILASSATACDRCLHQSKASYFS-KASALSSGACGYGSLALDFSGGHLAAG 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
            ++L+ +GAGCGACFQVRCKN+A+C KEGTK+V+TD N ++QTD V+S +AF+ M   G 
Sbjct: 61  VSSLFYNGAGCGACFQVRCKNQAICTKEGTKVVLTDLNHNNQTDFVLSSRAFTAMAQKGM 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
            + ++  G+VD+E+KRVPCEYK +NL VRVEE SK P YLA+K LYQGGQTEIVG+D+A+
Sbjct: 121 SQQILKLGIVDIEYKRVPCEYKKQNLAVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAQ 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG SNWS ++RN+GAVWD+ R + +G LQ R V+TSG+DGKW+W+K V P DW+ G +YD
Sbjct: 181 VGSSNWSFLSRNHGAVWDTSR-VPQGALQFRIVVTSGYDGKWLWAKKVLPADWKNGVIYD 240

Query: 241 TGVQINDVAKENCPDDQCADKHWA 265
           + +QI ++A+E C    C D+ W+
Sbjct: 241 SDIQITEIAQEGC--SPCNDETWS 260

[Close]

BLAST of CmaCh11G013510 vs. TrEMBL
Match: V4SA67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029088mg PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-85
Identity = 149/263 (56.65%), Postives = 194/263 (73.76%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           M  FL  LF  + SSA ACDRC+HQ K A++  ++     GACGYG+L    + GH +A 
Sbjct: 1   MVLFLCFLFF-LFSSATACDRCVHQTKVAYFS-QASALSSGACGYGSLALSFNGGHLAAG 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
             +LY  GAGCGACFQ+RCKN  LC+ +GT++++TD N S+QTD VIS +AF  +   GK
Sbjct: 61  VPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGK 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
            + ++  GVVDVE+KRVPCEYKN+NL VRVEE S+ P YLA+K+LYQGGQTE+V +D+A+
Sbjct: 121 GQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQ 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG SNW  M+RNYGAVWD+ R +  G LQ RFV+TSG+DGKWIW+K V P DW+PG +Y+
Sbjct: 181 VGSSNWGYMSRNYGAVWDTSR-VPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYN 240

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           +GVQI D+AKE C + +C D  W
Sbjct: 241 SGVQITDIAKEGCSESECGDGSW 260

[Close]

BLAST of CmaCh11G013510 vs. TrEMBL
Match: A0A0D2Q9I1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G203200 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.0e-85
Identity = 150/263 (57.03%), Postives = 198/263 (75.29%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           M  FL +LFL ++SSA+ACDRCLHQ+KAA++  ++     GACGYG+L   LS GH +A 
Sbjct: 1   MALFLCVLFL-LLSSASACDRCLHQSKAAYFS-KASALSAGACGYGSLALGLSGGHLAAG 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
            ++LY  GAGCGACFQ+RCKN  LC+ EGT+I +TD N +++TD V+S +AF  M   G 
Sbjct: 61  VSSLYKDGAGCGACFQIRCKNSTLCSSEGTRITLTDLNHNNETDFVLSSRAFMAMANKGM 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
              ++  G+VDVE+KR+PCEYKN+NL VRVEE S+ P YLA+KL+YQGGQTE+V +D+A+
Sbjct: 121 GRDILKLGIVDVEYKRIPCEYKNQNLAVRVEESSQKPNYLAIKLMYQGGQTEVVAMDVAQ 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG +NW+ M+RN+GAVWD+ R +  G LQ RFV+TSGFDGKWIW+K V P +W+ G +YD
Sbjct: 181 VGSANWNFMSRNHGAVWDTSR-VPNGALQFRFVVTSGFDGKWIWAKSVLPAEWKTGVIYD 240

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           +GVQI D+AKE C    C D HW
Sbjct: 241 SGVQITDIAKEGC--SPCDDSHW 258

[Close]

BLAST of CmaCh11G013510 vs. TrEMBL
Match: A0A067FLN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024895mg PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.0e-85
Identity = 149/263 (56.65%), Postives = 193/263 (73.38%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           M  FL  LF  + SSA ACDRC+HQ K A++  ++     GACGYG+L    + GH +A 
Sbjct: 1   MVLFLCFLFF-LFSSATACDRCVHQTKVAYFS-QASALSSGACGYGSLALSFNGGHLAAG 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
             +LY  GAGCGACFQ+RCKN  LC+  GT++++TD N S+QTD VIS +AF  +   GK
Sbjct: 61  VPSLYKDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGK 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
            + ++  GVVDVE+KRVPCEYKN+NL VRVEE S+ P YLA+K+LYQGGQTE+V +D+A+
Sbjct: 121 GQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQ 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG SNW  M+RNYGAVWD+ R +  G LQ RFV+TSG+DGKWIW+K V P DW+PG +Y+
Sbjct: 181 VGSSNWGYMSRNYGAVWDTSR-VPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYN 240

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           +GVQI D+AKE C + +C D  W
Sbjct: 241 SGVQITDIAKEGCSESECGDGSW 260

[Close]

BLAST of CmaCh11G013510 vs. TAIR10
Match: AT4G38400.1 (AT4G38400.1 expansin-like A2)

HSP 1 Score: 283.5 bits (724), Expect = 1.4e-76
Identity = 137/262 (52.29%), Postives = 185/262 (70.61%), Query Frame = 1


Query: 4   FLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITAT 63
           FL  + L   SSAAACDRCLH +KAA++   S     GAC YG++ +    GH +A   +
Sbjct: 7   FLLSVVLLFSSSAAACDRCLHSSKAAYFSSAS-ALSSGACAYGSMATGFFAGHIAAALPS 66

Query: 64  LYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMG--LSGKE 123
           +Y  G+GCGACFQVRCKN  LC+ +GT ++VTD N+++QTDLV+S +AF  M   + G +
Sbjct: 67  IYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGAD 126

Query: 124 ELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKV 183
             L+ +G+VD+E++RVPC+Y NK + VRVEE SK P YLA+KLLYQGGQTE+V I IA+V
Sbjct: 127 RDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQV 186

Query: 184 GESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYDT 243
           G S+WS M R++GAVW + + +  G LQ RFV+T+G+DGK +WS+ V P +W  G+ YD 
Sbjct: 187 GSSHWSYMTRSHGAVWVTDK-VPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYDA 246

Query: 244 GVQINDVAKENCPDDQCADKHW 264
           GVQI D+A+E C  D C D  W
Sbjct: 247 GVQITDIAQEGC--DPCDDHIW 264

[Close]

BLAST of CmaCh11G013510 vs. TAIR10
Match: AT3G45960.2 (AT3G45960.2 expansin-like A3)

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 135/257 (52.53%), Postives = 180/257 (70.04%), Query Frame = 1


Query: 4   FLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITAT 63
           +L ++     SS  ACDRCLH++KA+++   S     GAC YG + +    GH +A   +
Sbjct: 6   YLIVVIFLFSSSVNACDRCLHRSKASYFSSAS-ALSSGACAYGPMATSFFAGHIAAAIPS 65

Query: 64  LYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMG--LSGKE 123
           +Y  GAGCGACFQVRCKN  LCN +GT ++VTD N S+QTDLV+S +AF  M   + G +
Sbjct: 66  IYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVD 125

Query: 124 ELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKV 183
           + L+ +G+VDVE++RVPC Y  +NL VRVEE SK P YLA+KLLYQGGQTE+VGIDIA V
Sbjct: 126 KYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPV 185

Query: 184 GESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYDT 243
           G S WS M+R++GAVW + + +  G LQ +F +T G+DGK +WSK V P +W  G++YD 
Sbjct: 186 GSSQWSYMSRSHGAVWATDK-VPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDA 245

Query: 244 GVQINDVAKENCPDDQC 259
           GVQI D+A+E C  D C
Sbjct: 246 GVQITDIAQEGC--DTC 258

[Close]

BLAST of CmaCh11G013510 vs. TAIR10
Match: AT3G45970.1 (AT3G45970.1 expansin-like A1)

HSP 1 Score: 277.7 bits (709), Expect = 7.5e-75
Identity = 135/263 (51.33%), Postives = 184/263 (69.96%), Query Frame = 1


Query: 4   FLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAITAT 63
           FL ++     SS  ACDRCLH++KAA++   S     GAC YG++ +    GH +A   +
Sbjct: 6   FLIVVIFLFSSSVNACDRCLHRSKAAYFSSAS-ALSSGACAYGSMATSFFAGHIAAAIPS 65

Query: 64  LYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMG--LSGKE 123
           +Y  GAGCGACFQVRCKN  LC+ +GT +++TD N+S+QTDLV+S +AF  M   + G +
Sbjct: 66  IYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGAD 125

Query: 124 ELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAKV 183
           + L+ +G+VD+E++RVPC+Y NKN+ VRVEE SK P YL +KLLYQGGQTE+V IDIA+V
Sbjct: 126 KDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQV 185

Query: 184 GES-NWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 243
           G S NW  M R++GAVW + + +  G +Q RFV+T G+DGK IWS+ V P +W  G++YD
Sbjct: 186 GSSPNWGYMTRSHGAVWVTDK-VPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYD 245

Query: 244 TGVQINDVAKENCPDDQCADKHW 264
            GVQI D+A+E C  D C    W
Sbjct: 246 AGVQITDIAQEGC--DPCDAHIW 264

[Close]

BLAST of CmaCh11G013510 vs. TAIR10
Match: AT4G17030.1 (AT4G17030.1 expansin-like B1)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-42
Identity = 81/204 (39.71%), Postives = 116/204 (56.86%), Query Frame = 1


Query: 40  RGACGYGNLTSELSNGHFSAITATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNE 99
           RG CGYG    +++NG  S ++  L+ +G GCGAC+QVRCK    C++EG  +V TD  E
Sbjct: 45  RGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGE 104

Query: 100 SSQTDLVISKKAFSEMGLSGKEELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTY 159
              TD ++S KA+  M   G E  L   GVV+VE++R+PC Y   NL+ ++ E S  P Y
Sbjct: 105 GDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHY 164

Query: 160 LAMKLLYQGGQTEIVGIDIAKVGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFD 219
           LA+ +LY GG  +I+ +++ +     W  M R +GAV D + P   G L LRF++     
Sbjct: 165 LAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNP-PRGTLTLRFLVYGSAG 224

Query: 220 GKWIWSKYVFPVDWRPGQVYDTGV 244
             WI S    P DW  G  YD+ +
Sbjct: 225 INWIQSPNAIPADWTAGATYDSNI 247

[Close]

BLAST of CmaCh11G013510 vs. TAIR10
Match: AT1G65680.1 (AT1G65680.1 expansin B2)

HSP 1 Score: 115.5 bits (288), Expect = 4.9e-26
Identity = 73/216 (33.80%), Postives = 118/216 (54.63%), Query Frame = 1


Query: 35  SDGELRGACGYGNLTSELSNGHF-SAITATLYGHGAGCGACFQVRCKNEALCNKEGTKIV 94
           SDG   GACGYGN  ++       SA   +L+  G GCGAC+QV+C +++ C+K    +V
Sbjct: 63  SDG---GACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVV 122

Query: 95  VTD---GNESSQTDLVISKKAFSEMGLSGKEELLIIEGVVDVEFKRVPCEYKNKNLMVRV 154
           +TD   G         +S  AF  M +SG++  L   G + + +K+V C Y  K +  +V
Sbjct: 123 ITDECPGCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQV 182

Query: 155 EEMSKPPTYLAMKLLYQGGQTEIVGIDIAKVGESN-WSMMARNYGAVW--DSKRPISEGP 214
           ++ S   ++ A+ + Y  G  EI  I++ +  +S+ W  M++++GAVW  D   P+   P
Sbjct: 183 DKGSNANSF-AVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPL-RAP 242

Query: 215 LQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYDTGV 244
           L LR  +TS   GK + +  V P +W+PG +Y + V
Sbjct: 243 LSLR--VTSLESGKTVVASNVIPANWQPGAIYKSNV 271

[Close]

BLAST of CmaCh11G013510 vs. NCBI nr
Match: gi|449471919|ref|XP_004153444.1| (PREDICTED: expansin-like A2 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 2.6e-109
Identity = 188/263 (71.48%), Postives = 221/263 (84.03%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           MPFFL LLFL++ SSA ACDRC+HQAKAAFYQ E+ G  RGACGYG+LT +LSNG+FSAI
Sbjct: 1   MPFFLLLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAI 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
              LY +GAGCGACFQVRCKNE +C+KEGTKI+VTD N+++ T LV+S+KAF EM +SGK
Sbjct: 61  MPPLYKYGAGCGACFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAMSGK 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
           + LL+  GVVDVEFKR+PCEY NKNLMVRVEE S+ P YLA+KLL QGGQTEIV IDIA+
Sbjct: 121 DGLLLSYGVVDVEFKRIPCEYDNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQ 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG SNW  M RNYGAVW++K+P  +GPLQLRFV+TSG+DGK+IW+KYV P DWRPG VYD
Sbjct: 181 VGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRPGLVYD 240

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           TGVQI D+AKE CP +QC D  W
Sbjct: 241 TGVQIYDIAKEGCPTEQCGDGQW 263

[Close]

BLAST of CmaCh11G013510 vs. NCBI nr
Match: gi|659094102|ref|XP_008447884.1| (PREDICTED: expansin-like A2 [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 6.3e-108
Identity = 186/263 (70.72%), Postives = 220/263 (83.65%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           MPFFL LLFL++ SSA ACDRC+HQAKAAFYQ E+ G  RGACGYG+LT +LSNG+FSAI
Sbjct: 48  MPFFLLLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAI 107

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
              LY +GAGCGACFQVRCKNE +C+KEGTKI+VTD N+++ T LV+S+KAF EM +SGK
Sbjct: 108 MPPLYKYGAGCGACFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAVSGK 167

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
           + LL+  GVVDVEFKR+PCEY N NLMVRVEE S+ P YLA+KLL QGGQTEIV IDIA+
Sbjct: 168 DGLLLSYGVVDVEFKRIPCEYNNLNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQ 227

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG SNW  M RNYGAVW++K+P  +GPLQLRFV+TSG+DGK+IW+K+V P DWRPG VYD
Sbjct: 228 VGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKHVLPADWRPGLVYD 287

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           TGVQI D+AKE CP +QC D  W
Sbjct: 288 TGVQIYDIAKEGCPTEQCGDGQW 310

[Close]

BLAST of CmaCh11G013510 vs. NCBI nr
Match: gi|700188077|gb|KGN43310.1| (hypothetical protein Csa_7G019900 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 7.7e-106
Identity = 188/282 (66.67%), Postives = 221/282 (78.37%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           MPFFL LLFL++ SSA ACDRC+HQAKAAFYQ E+ G  RGACGYG+LT +LSNG+FSAI
Sbjct: 1   MPFFLLLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAI 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
              LY +GAGCGACFQVRCKNE +C+KEGTKI+VTD N+++ T LV+S+KAF EM +SGK
Sbjct: 61  MPPLYKYGAGCGACFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAMSGK 120

Query: 121 EELLIIEGVVDVEFK-------------------RVPCEYKNKNLMVRVEEMSKPPTYLA 180
           + LL+  GVVDVEFK                   R+PCEY NKNLMVRVEE S+ P YLA
Sbjct: 121 DGLLLSYGVVDVEFKSEILSKFYDLGVDFPSYSCRIPCEYDNKNLMVRVEEWSQYPNYLA 180

Query: 181 MKLLYQGGQTEIVGIDIAKVGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGK 240
           +KLL QGGQTEIV IDIA+VG SNW  M RNYGAVW++K+P  +GPLQLRFV+TSG+DGK
Sbjct: 181 IKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGK 240

Query: 241 WIWSKYVFPVDWRPGQVYDTGVQINDVAKENCPDDQCADKHW 264
           +IW+KYV P DWRPG VYDTGVQI D+AKE CP +QC D  W
Sbjct: 241 YIWAKYVLPADWRPGLVYDTGVQIYDIAKEGCPTEQCGDGQW 282

[Close]

BLAST of CmaCh11G013510 vs. NCBI nr
Match: gi|659094108|ref|XP_008447888.1| (PREDICTED: expansin-like A3 isoform X3 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 3.9e-89
Identity = 155/263 (58.94%), Postives = 193/263 (73.38%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           M +FL L F  +VS A ACDRC+H++KA  Y  +S     GACGYG+L  E ++G+FSA 
Sbjct: 1   MAWFLSLFFFFLVSFANACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTDGYFSAA 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
             +LY  GAGCGACFQVRCK++ LCN  G+K+V+TD N  S+ D V+S+KAFS M L GK
Sbjct: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGSKVVLTDQNYDSRVDFVLSRKAFSAMALKGK 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
            + L+  G+VDVE+KR+PC YKNKNL VRVEE S  P YLA+KLLYQGGQTEIV +DIA+
Sbjct: 121 GQELLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLALKLLYQGGQTEIVAVDIAE 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG   W  + RNYGAVWD+ + +  G LQ+R   TSG+DGKW+W++YV PVDW  G +YD
Sbjct: 181 VGSYEWVSLRRNYGAVWDTNK-VPNGALQMRMAFTSGYDGKWVWAEYVLPVDWEVGAIYD 240

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           TGVQI D+AKE CP  QC DK W
Sbjct: 241 TGVQIYDIAKEGCPRSQCGDKPW 262

[Close]

BLAST of CmaCh11G013510 vs. NCBI nr
Match: gi|449454267|ref|XP_004144877.1| (PREDICTED: expansin-like A3 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 5.0e-89
Identity = 153/263 (58.17%), Postives = 195/263 (74.14%), Query Frame = 1


Query: 1   MPFFLPLLFLTIVSSAAACDRCLHQAKAAFYQVESDGELRGACGYGNLTSELSNGHFSAI 60
           M +FL L F  +VS   ACDRC+H++KA  Y  +S     GACGYG++  E +NG+FSA 
Sbjct: 1   MAWFLSLFFFFLVSFTNACDRCIHRSKATHYYGDSPTSYGGACGYGDMALEFTNGYFSAA 60

Query: 61  TATLYGHGAGCGACFQVRCKNEALCNKEGTKIVVTDGNESSQTDLVISKKAFSEMGLSGK 120
             +LY  GAGCGACFQVRCK++ LCN  G+K+V+TD N  S+ D V+S+KAFS M L GK
Sbjct: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGSKVVLTDQNYDSRADFVLSRKAFSAMALKGK 120

Query: 121 EELLIIEGVVDVEFKRVPCEYKNKNLMVRVEEMSKPPTYLAMKLLYQGGQTEIVGIDIAK 180
            + L+  G+VDVE+KR+PC YKNKNL VRVEE S  P YLA+KLLYQGGQTEIV ++IA+
Sbjct: 121 GQELLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAVKLLYQGGQTEIVAVEIAE 180

Query: 181 VGESNWSMMARNYGAVWDSKRPISEGPLQLRFVLTSGFDGKWIWSKYVFPVDWRPGQVYD 240
           VG   W  + RNYGAVWD+ + + +G LQ+R   TSG+DGKW+W++YV PVDW+ G +YD
Sbjct: 181 VGSYEWVSLRRNYGAVWDTSK-VPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKVGAIYD 240

Query: 241 TGVQINDVAKENCPDDQCADKHW 264
           TGVQI D+AKE+CP  QC DK W
Sbjct: 241 TGVQIYDIAKESCPTSQCGDKPW 262

The following BLAST results are available for this feature:

BLAST of CmaCh11G013510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EXLA2_ARATH	2.4e-75	52.29	Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1	[more]
EXLA3_ARATH	3.5e-74	52.53	Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1	[more]
EXLA1_ARATH	1.3e-73	51.33	Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1	[more]
EXLA2_ORYSJ	2.1e-63	47.35	Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1	[more]
EXLA1_ORYSJ	4.0e-62	47.92	Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1	[more]

BLAST of CmaCh11G013510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K0S3_CUCSA	5.4e-106	66.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G019900 PE=3 SV=1	[more]
I3SMJ2_MEDTR	1.4e-85	55.30	Expansin A1 OS=Medicago truncatula GN=MTR_4g075790 PE=2 SV=1	[more]
V4SA67_9ROSI	3.1e-85	56.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029088mg PE=3 SV=1	[more]
A0A0D2Q9I1_GOSRA	4.0e-85	57.03	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G203200 PE=3 SV=1	[more]
A0A067FLN8_CITSI	4.0e-85	56.65	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024895mg PE=3 SV=1	[more]

BLAST of CmaCh11G013510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38400.1	1.4e-76	52.29	expansin-like A2	[more]
AT3G45960.2	2.0e-75	52.53	expansin-like A3	[more]
AT3G45970.1	7.5e-75	51.33	expansin-like A1	[more]
AT4G17030.1	1.7e-42	39.71	expansin-like B1	[more]
AT1G65680.1	4.9e-26	33.80	expansin B2	[more]

BLAST of CmaCh11G013510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449471919\|ref\|XP_004153444.1\|	2.6e-109	71.48	PREDICTED: expansin-like A2 [Cucumis sativus]	[more]
gi\|659094102\|ref\|XP_008447884.1\|	6.3e-108	70.72	PREDICTED: expansin-like A2 [Cucumis melo]	[more]
gi\|700188077\|gb\|KGN43310.1\|	7.7e-106	66.67	hypothetical protein Csa_7G019900 [Cucumis sativus]	[more]
gi\|659094108\|ref\|XP_008447888.1\|	3.9e-89	58.94	PREDICTED: expansin-like A3 isoform X3 [Cucumis melo]	[more]
gi\|449454267\|ref\|XP_004144877.1\|	5.0e-89	58.17	PREDICTED: expansin-like A3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007112	Expansin/allergen_DPBB_dom
IPR007117	Expansin_CBD
IPR007118	Expan_Lol_pI
IPR009009	RlpA-like_DPBB

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G013510.1	CmaCh11G013510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007112	Expansin/pollen allergen, DPBB domain	PROFILE	PS50842	EXPANSIN_EG45	coord: 40..144 score: 23
IPR007117	Expansin, cellulose-binding-like domain	GENE3D	G3DSA:2.60.40.760		coord: 139..245 score: 1.4
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Pollen_allerg_1	coord: 147..230 score: 3.8
IPR007117	Expansin, cellulose-binding-like domain	PROFILE	PS50843	EXPANSIN_CBD	coord: 158..241 score: 18
IPR007117	Expansin, cellulose-binding-like domain	unknown	SSF49590	PHL pollen allergen	coord: 144..240 score: 2.09
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 186..200 score: 1.5E-19coord: 39..57 score: 1.5E-19coord: 227..241 score: 1.5E-19coord: 61..79 score: 1.5E-19coord: 127..143 score: 1.5
IPR009009	RlpA-like protein, double-psi beta-barrel domain	GENE3D	G3DSA:2.40.40.10		coord: 8..138 score: 2.3
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 59..132 score: 1.
IPR009009	RlpA-like protein, double-psi beta-barrel domain	unknown	SSF50685	Barwin-like endoglucanases	coord: 8..143 score: 4.53
None	No IPR available	PANTHER	PTHR31692	FAMILY NOT NAMED	coord: 1..247 score: 2.8E
None	No IPR available	PANTHER	PTHR31692:SF4	EXPANSIN-LIKE A1-RELATED	coord: 1..247 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G013510	Cucsa.099320	Cucumber (Gy14) v1	cgycmaB0215
CmaCh11G013510	Cla015774	Watermelon (97103) v1	cmawmB121
CmaCh11G013510	Csa7G018830	Cucumber (Chinese Long) v2	cmacuB151
CmaCh11G013510	MELO3C013289	Melon (DHL92) v3.5.1	cmameB092
CmaCh11G013510	ClCG02G003620	Watermelon (Charleston Gray)	cmawcgB097
CmaCh11G013510	CSPI07G01460	Wild cucumber (PI 183967)	cmacpiB149
CmaCh11G013510	CmoCh11G017680	Cucurbita moschata (Rifu)	cmacmoB117
CmaCh11G013510	Lsi11G012480	Bottle gourd (USVL1VR-Ls)	cmalsiB100
CmaCh11G013510	Cp4.1LG15g06260	Cucurbita pepo (Zucchini)	cmacpeB118
CmaCh11G013510	Cp4.1LG04g04730	Cucurbita pepo (Zucchini)	cmacpeB154
CmaCh11G013510	MELO3C013294.2	Melon (DHL92) v3.6.1	cmamedB100
CmaCh11G013510	CsaV3_7G001500	Cucumber (Chinese Long) v3	cmacucB0176
CmaCh11G013510	Cla97C02G030360	Watermelon (97103) v2	cmawmbB101
CmaCh11G013510	Bhi05G001390	Wax gourd	cmawgoB0115
CmaCh11G013510	CsGy7G001300	Cucumber (Gy14) v2	cgybcmaB899

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G013510	Silver-seed gourd	carcmaB0483
CmaCh11G013510	Silver-seed gourd	carcmaB1451
CmaCh11G013510	Cucurbita maxima (Rimu)	cmacmaB151
CmaCh11G013510	Cucurbita maxima (Rimu)	cmacmaB155
CmaCh11G013510	Cucurbita maxima (Rimu)	cmacmaB162
CmaCh11G013510	Cucurbita moschata (Rifu)	cmacmoB145
CmaCh11G013510	Cucurbita moschata (Rifu)	cmacmoB149
CmaCh11G013510	Cucurbita moschata (Rifu)	cmacmoB155
CmaCh11G013510	Cucurbita pepo (Zucchini)	cmacpeB123